@article{lin13656,
title = {Anaerostipes hadrus comb. nov., a dominant species within the human colonic microbiota; reclassification of Eubacterium hadrum Moore et al. 1976.},
author = {Allen-Vercoe E, Daigneault M, White A, Panaccione R, Duncan SH, Flint HJ, O'Neal L, Lawson PA},
journal = {Anaerobe},
year = {2012},
doi = {10.1016/j.anaerobe.2012.09.002},
pmid = {22982042}
}
@article{lin153831,
title = {Accelerated dysbiosis of gut microbiota during aggravation of DSS-induced colitis by a butyrate-producing bacterium.},
author = {Zhang Q, Wu Y, Wang J, Wu G, Long W, Xue Z, Wang L, Zhang X, Pang X, Zhao Y, Zhao L, Zhang C.},
journal = {Sci Rep},
year = {2016},
doi = {10.1038/srep27572},
pmid = {27264309}
}
@article{lin153837,
title = {High-quality-draft genome sequence of the fermenting bacterium Anaerobium acetethylicum type strain GluBS11T (DSM 29698).},
author = {Patil Y, Muller N, Schink B, Whitman WB, Huntemann M, Clum A, Pillay M, Palaniappan K, Varghese N, Mikhailova N, Stamatis D, Reddy TBK, Daum C, Shapiro N, Ivanova N, Kyrpides N, Woyke T, Junghare M.},
journal = {Stand Genomic Sci},
year = {2017},
doi = {10.1186/s40793-017-0236-4},
pmid = {28250895}
}
@article{lin153828,
title = {A Diverse Range of Human Gut Bacteria Have the Potential To Metabolize the Dietary Component Gallic Acid.},
author = {Esteban-Torres M, Santamaria L, Cabrera-Rubio R, Plaza-Vinuesa L, Crispie F, de Las Rivas B, Cotter P, Munoz R.},
journal = {Appl Environ Microbiol},
year = {2018},
doi = {10.1128/aem.01558-18},
pmid = {30054365}
}
@article{lin13655,
title = {Reclassification of Eubacterium hallii as Anaerobutyricum hallii gen. nov., comb. nov., and description of Anaerobutyricum soehngenii sp. nov., a butyrate and propionate-producing bacterium from infant faeces.},
author = {Shetty SA, Zuffa S, Bui TPN, Aalvink S, Smidt H, De Vos WM},
journal = {Int J Syst Evol Microbiol},
year = {2018},
doi = {10.1099/ijsem.0.003041},
pmid = {30351260}
}
@article{lin153836,
title = {Comparative in silico analysis of ftsZ gene from different bacteria reveals the preference for core set of codons in coding sequence structuring and secondary structural elements determination.},
author = {Pal A, Saha BK, Saha J.},
journal = {PLoS One},
year = {2019},
doi = {10.1371/journal.pone.0219231},
pmid = {31841523}
}
@article{lin153835,
title = {Developing standards for the microbiome field.},
author = {Amos GCA, Logan A, Anwar S, Fritzsche M, Mate R, Bleazard T, Rijpkema S.},
journal = {Microbiome},
year = {2020},
doi = {10.1186/s40168-020-00856-3},
pmid = {32591016}
}
@article{lin153841,
title = {Characterization of fructooligosaccharide metabolism and fructooligosaccharide-degrading enzymes in human commensal butyrate producers.},
author = {Tanno H, Fujii T, Hirano K, Maeno S, Tonozuka T, Sakamoto M, Ohkuma M, Tochio T, Endo A.},
journal = {Gut Microbes},
year = {2021},
doi = {10.1080/19490976.2020.1869503},
pmid = {33439065}
}
@article{lin153832,
title = {Xylitol enhances synthesis of propionate in the colon via cross-feeding of gut microbiota.},
author = {Xiang S, Ye K, Li M, Ying J, Wang H, Han J, Shi L, Xiao J, Shen Y, Feng X, Bao X, Zheng Y, Ge Y, Zhang Y, Liu C, Chen J, Chen Y, Tian S, Zhu X.},
journal = {Microbiome},
year = {2021},
doi = {10.1186/s40168-021-01029-6},
pmid = {33736704}
}
@article{lin153842,
title = {Rationally designed bacterial consortia to treat chronic immune-mediated colitis and restore intestinal homeostasis.},
author = {van der Lelie D, Oka A, Taghavi S, Umeno J, Fan TJ, Merrell KE, Watson SD, Ouellette L, Liu B, Awoniyi M, Lai Y, Chi L, Lu K, Henry CS, Sartor RB.},
journal = {Nat Commun},
year = {2021},
doi = {10.1038/s41467-021-23460-x},
pmid = {34050144}
}
@article{lin153830,
title = {Microbial short-chain fatty acids modulate CD8+ T cell responses and improve adoptive immunotherapy for cancer.},
author = {Luu M, Riester Z, Baldrich A, Reichardt N, Yuille S, Busetti A, Klein M, Wempe A, Leister H, Raifer H, Picard F, Muhammad K, Ohl K, Romero R, Fischer F, Bauer CA, Huber M, Gress TM, Lauth M, Danhof S, Bopp T, Nerreter T, Mulder IE, Steinhoff U, Hudecek M, Visekruna A.},
journal = {Nat Commun},
year = {2021},
doi = {10.1038/s41467-021-24331-1},
pmid = {34210970}
}
@article{lin13654,
title = {Description of Anaerostipes faecalis sp. nov., a new segmented filamentous bacterium isolated from swine faeces.},
author = {Choi SH, Choi JY, Park JE, Kim JS, Kang SW, Lee J, Lee MK, Lee JS, Lee JH, Jung H, Hur TY, Kim HB, Lee JH, Kim JK, Hong Y, Park SH},
journal = {Antonie Van Leeuwenhoek},
year = {2021},
doi = {10.1007/s10482-021-01646-z},
pmid = {34491487}
}
@article{lin153833,
title = {Determination of Butyrate Synthesis Capacity in Gut Microbiota: Quantification of but Gene Abundance by qPCR in Fecal Samples.},
author = {Daskova N, Heczkova M, Modos I, Videnska P, Splichalova P, Pelantova H, Kuzma M, Gojda J, Cahova M.},
journal = {Biomolecules},
year = {2021},
doi = {10.3390/biom11091303},
pmid = {34572516}
}
@article{lin153834,
title = {Phylogeny-Aware Analysis of Metagenome Community Ecology Based on Matched Reference Genomes while Bypassing Taxonomy.},
author = {Zhu Q, Huang S, Gonzalez A, McGrath I, McDonald D, Haiminen N, Armstrong G, Vazquez-Baeza Y, Yu J, Kuczynski J, Sepich-Poore GD, Swafford AD, Das P, Shaffer JP, Lejzerowicz F, Belda-Ferre P, Havulinna AS, Meric G, Niiranen T, Lahti L, Salomaa V, Kim HC, Jain M, Inouye M, Gilbert JA, Knight R.},
journal = {mSystems},
year = {2022},
doi = {10.1128/msystems.00167-22},
pmid = {35369727}
}
@article{lin153840,
title = {Evolutionary Insights Into Microbiota Transplantation in Inflammatory Bowel Disease.},
author = {Wang X, Zhao J, Feng Y, Feng Z, Ye Y, Liu L, Kang G, Cao X.},
journal = {Front Cell Infect Microbiol},
year = {2022},
doi = {10.3389/fcimb.2022.916543},
pmid = {35811664}
}
@article{lin153826,
title = {Development of culture methods capable of culturing a wide range of predominant species of intestinal bacteria.},
author = {Hirano R, Nishita I, Nakai R, Bito A, Sasabe R, Kurihara S.},
journal = {Front Cell Infect Microbiol},
year = {2023},
doi = {10.3389/fcimb.2023.1056866},
pmid = {37520440}
}
@article{lin153838,
title = {Complete genome sequences of butyrate producing Anaerostipes hadrus strains BA1 and GIF7 isolated from the terminal ileum of a healthy lean male.},
author = {Low A, Sheludchenko M, Cheng HE, Koh XQ, Lee JWJ.},
journal = {Microbiol Resour Announc},
year = {2023},
doi = {10.1128/mra.00701-23},
pmid = {37772842}
}
@article{lin153825,
title = {Vitamin B12 analogues from gut microbes and diet differentially impact commensal propionate producers of the human gut.},
author = {Kundra P, Greppi A, Duppenthaler M, Pluss S, Pugin B, Lacroix C, Geirnaert A.},
journal = {Front Nutr},
year = {2024},
doi = {10.3389/fnut.2024.1360199},
pmid = {38389799}
}
@article{lin153824,
title = {Differences in gut microbiota between Dutch and South-Asian Surinamese: potential implications for type 2 diabetes mellitus.},
author = {Nayman EI, Schwartz BA, Polmann M, Gumabong AC, Nieuwdorp M, Cickovski T, Mathee K.},
journal = {Sci Rep},
year = {2024},
doi = {10.1038/s41598-024-54769-4},
pmid = {38403716}
}
@article{lin153829,
title = {Visceral adiposity in postmenopausal women is associated with a pro-inflammatory gut microbiome and immunogenic metabolic endotoxemia.},
author = {Gaber M, Wilson AS, Millen AE, Hovey KM, LaMonte MJ, Wactawski-Wende J, Ochs-Balcom HM, Cook KL.},
journal = {Microbiome},
year = {2024},
doi = {10.1186/s40168-024-01901-1},
pmid = {39367431}
}
@article{lin153827,
title = {Deciphering oxidative stress responses in human gut microbes and fecal microbiota: a cultivation-based approach.},
author = {Zund JN, Caflisch M, Mujezinovic D, Pluss S, Lacroix C, Pugin B.},
journal = {FEMS Microbiol Ecol},
year = {2025},
doi = {10.1093/femsec/fiaf054},
pmid = {40392681}
}
@article{lin153823,
title = {MediaMatch: Prediction of Bacterial Growth on Different Culture Media Using the XGBoost Algorithm.},
author = {Liu J, Xu G, Liu W, Liu T, Li Y, Tu T, Luo H, Wu N, Yao B, Tian J, Zhang J, Guan F.},
journal = {Microb Biotechnol},
year = {2025},
doi = {10.1111/1751-7915.70245},
pmid = {41045019}
}
@article{lin153839,
title = {Computational Screening and Experimental Validation of Natural Compounds that Enhance Butyrate Production in Gut Bacteria and Promote Muscle Cell Mass.},
author = {Zhang T, Wu X, Li C, Yue Y, Lee Y, Park S.},
journal = {ACS Omega},
year = {2025},
doi = {10.1021/acsomega.5c07510},
pmid = {41244376}
}