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title = {Enhanced production of citric acid in Yarrowia lipolytica by Triton X-100.},
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title = {Structural insights into dissimilatory sulfite reductases: structure of desulforubidin from desulfomicrobium norvegicum.},
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@article{lin119290,
title = {The N-acylneuraminate cytidyltransferase gene, neuA, is heterogenous in Legionella pneumophila strains but can be used as a marker for epidemiological typing in the consensus sequence-based typing scheme.},
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title = {Systematic mapping of two component response regulators to gene targets in a model sulfate reducing bacterium.},
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@article{lin119364,
title = {The sulfur oxygenase reductase from the mesophilic bacterium Halothiobacillus neapolitanus is a highly active thermozyme.},
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@article{lin119283,
title = {Characterization of the amicetin biosynthesis gene cluster from Streptomyces vinaceusdrappus NRRL 2363 implicates two alternative strategies for amide bond formation.},
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title = {Sulfur bacteria in wastewater stabilization ponds periodically affected by the 'red-water' phenomenon.},
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title = {Analyses of the large subunit histidine-rich motif expose an alternative proton transfer pathway in [NiFe] hydrogenases.},
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title = {Transcription factor family-based reconstruction of singleton regulons and study of the Crp/Fnr, ArsR, and GntR families in Desulfovibrionales genomes.},
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title = {Variation among Desulfovibrio species in electron transfer systems used for syntrophic growth.},
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title = {Genomic analysis of Melioribacter roseus, facultatively anaerobic organotrophic bacterium representing a novel deep lineage within Bacteriodetes/Chlorobi group.},
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@article{lin119300,
title = {Enriched Iron(III)-Reducing Bacterial Communities are Shaped by Carbon Substrate and Iron Oxide Mineralogy.},
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@article{lin119282,
title = {Genome Sequence of Halanaerobium saccharolyticum subsp. saccharolyticum Strain DSM 6643T, a Halophilic Hydrogen-Producing Bacterium.},
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journal = {Genome Announc},
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@article{lin119315,
title = {Structural foundations for the O2 resistance of Desulfomicrobium baculatum [NiFeSe]-hydrogenase.},
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journal = {Chem Commun (Camb)},
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@article{lin119365,
title = {Selenocysteine confers resistance to inactivation by oxidation in thioredoxin reductase: comparison of selenium and sulfur enzymes.},
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@article{lin119281,
title = {New family of tungstate-responsive transcriptional regulators in sulfate-reducing bacteria.},
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@article{lin119361,
title = {Roles of HynAB and Ech, the only two hydrogenases found in the model sulfate reducer Desulfovibrio gigas.},
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journal = {J Bacteriol},
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@article{lin119342,
title = {How light-harvesting semiconductors can alter the bias of reversible electrocatalysts in favor of H2 production and CO2 reduction.},
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@article{lin119376,
title = {The human gut and groundwater harbor non-photosynthetic bacteria belonging to a new candidate phylum sibling to Cyanobacteria.},
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@article{lin119303,
title = {Life based on phosphite: a genome-guided analysis of Desulfotignum phosphitoxidans.},
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title = {Deciphering unusual uncultured magnetotactic multicellular prokaryotes through genomics.},
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title = {Performance evaluation and bacteria analysis of AFB-MFC enriched with high-strength synthetic wastewater.},
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title = {Annotation of Protein Domains Reveals Remarkable Conservation in the Functional Make up of Proteomes Across Superkingdoms.},
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title = {[Biodiversity of sulfate-reducing bacteria growing on objects of heating systems].},
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title = {Decrease of U(VI) immobilization capability of the facultative anaerobic strain Paenibacillus sp. JG-TB8 under anoxic conditions due to strongly reduced phosphatase activity.},
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title = {Evolution of the F0F1 ATP synthase complex in light of the patchy distribution of different bioenergetic pathways across prokaryotes.},
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title = {Unravelling the carbon and sulphur metabolism in coastal soil ecosystems using comparative cultivation-independent genome-level characterisation of microbial communities.},
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@article{lin119354,
title = {Adaptation, ecology, and evolution of the halophilic stromatolite archaeon Halococcus hamelinensis inferred through genome analyses.},
author = {Gudhka RK, Neilan BA, Burns BP.},
journal = {Archaea},
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doi = {10.1155/2015/241608},
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@article{lin10051,
title = {Desulfoplanes formicivorans gen. nov., sp. nov., a novel sulfate-reducing bacterium isolated from a blackish meromictic lake, and emended description of the family Desulfomicrobiaceae.},
author = {Watanabe M, Kojima H, Fukui M},
journal = {Int J Syst Evol Microbiol},
year = {2015},
doi = {10.1099/ijs.0.000197},
pmid = {25792369}
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@article{lin119344,
title = {Synthetic Active Site Model of the [NiFeSe] Hydrogenase.},
author = {Wombwell C, Reisner E.},
journal = {Chemistry},
year = {2015},
doi = {10.1002/chem.201500311},
pmid = {25847470}
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@article{lin119316,
title = {[NiFeSe]-hydrogenase chemistry.},
author = {Wombwell C, Caputo CA, Reisner E.},
journal = {Acc Chem Res},
year = {2015},
doi = {10.1021/acs.accounts.5b00326},
pmid = {26488197}
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@article{lin119275,
title = {The complete genome sequence of a lactic acid bacterium Leuconostoc mesenteroides ssp. dextranicum strain DSM 20484(T).},
author = {Park GS, Hong SJ, Jung BK, Lee C, Park CK, Shin JH.},
journal = {J Biotechnol},
year = {2016},
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@article{lin119286,
title = {Molecular evolution of gas cavity in [NiFeSe] hydrogenases resurrected in silico.},
author = {Tamura T, Tsunekawa N, Nemoto M, Inagaki K, Hirano T, Sato F.},
journal = {Sci Rep},
year = {2016},
doi = {10.1038/srep19742},
pmid = {26818780}
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@article{lin119325,
title = {Bacterial ecology of abattoir wastewater treated by an anaerobic digestor.},
author = {Jabari L, Gannoun H, Khelifi E, Cayol JL, Godon JJ, Hamdi M, Fardeau ML.},
journal = {Braz J Microbiol},
year = {2016},
doi = {10.1016/j.bjm.2015.11.029},
pmid = {26887229}
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@article{lin119287,
title = {Complete Genome Sequence and Comparative Genomics of a Novel Myxobacterium Myxococcus hansupus.},
author = {Sharma G, Narwani T, Subramanian S.},
journal = {PLoS One},
year = {2016},
doi = {10.1371/journal.pone.0148593},
pmid = {26900859}
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@article{lin119306,
title = {The novel regulatory ncRNA, NfiS, optimizes nitrogen fixation via base pairing with the nitrogenase gene nifK mRNA in Pseudomonas stutzeri A1501.},
author = {Zhan Y, Yan Y, Deng Z, Chen M, Lu W, Lu C, Shang L, Yang Z, Zhang W, Wang W, Li Y, Ke Q, Lu J, Xu Y, Zhang L, Xie Z, Cheng Q, Elmerich C, Lin M.},
journal = {Proc Natl Acad Sci U S A},
year = {2016},
doi = {10.1073/pnas.1604514113},
pmid = {27407147}
}
@article{lin119297,
title = {Development and Validation of Broad-Range Qualitative and Clade-Specific Quantitative Molecular Probes for Assessing Mercury Methylation in the Environment.},
author = {Christensen GA, Wymore AM, King AJ, Podar M, Hurt RA, Santillan EU, Soren A, Brandt CC, Brown SD, Palumbo AV, Wall JD, Gilmour CC, Elias DA.},
journal = {Appl Environ Microbiol},
year = {2016},
doi = {10.1128/aem.01271-16},
pmid = {27422835}
}
@article{lin119277,
title = {Sulfur Oxygenase Reductase (Sor) in the Moderately Thermoacidophilic Leaching Bacteria: Studies in Sulfobacillus thermosulfidooxidans and Acidithiobacillus caldus.},
author = {Janosch C, Remonsellez F, Sand W, Vera M.},
journal = {Microorganisms},
year = {2015},
doi = {10.3390/microorganisms3040707},
pmid = {27682113}
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@article{lin119350,
title = {Bacterial and archeal community composition in hot springs from Indo-Burma region, North-east India.},
author = {Panda AK, Bisht SS, De Mandal S, Kumar NS.},
journal = {AMB Express},
year = {2016},
doi = {10.1186/s13568-016-0284-y},
pmid = {27832517}
}
@article{lin119291,
title = {Comparative Analysis of Type IV Pilin in Desulfuromonadales.},
author = {Shu C, Xiao K, Yan Q, Sun X.},
journal = {Front Microbiol},
year = {2016},
doi = {10.3389/fmicb.2016.02080},
pmid = {28066394}
}
@article{lin119330,
title = {Performance and microbial community variations of anaerobic digesters under increasing tetracycline concentrations.},
author = {Xiong Y, Harb M, Hong PY.},
journal = {Appl Microbiol Biotechnol},
year = {2017},
doi = {10.1007/s00253-017-8253-1},
pmid = {28365798}
}
@article{lin119357,
title = {Solar H2 evolution in water with modified diketopyrrolopyrrole dyes immobilised on molecular Co and Ni catalyst-TiO2 hybrids.},
author = {Warnan J, Willkomm J, Ng JN, Godin R, Prantl S, Durrant JR, Reisner E.},
journal = {Chem Sci},
year = {2017},
doi = {10.1039/c6sc05219c},
pmid = {28451376}
}
@article{lin119341,
title = {Carbon nitride-TiO2 hybrid modified with hydrogenase for visible light driven hydrogen production.},
author = {Caputo CA, Wang L, Beranek R, Reisner E.},
journal = {Chem Sci},
year = {2015},
doi = {10.1039/c5sc02017d},
pmid = {28757952}
}
@article{lin119351,
title = {Photoelectrocatalytic H2 evolution in water with molecular catalysts immobilised on p-Si via a stabilising mesoporous TiO2 interlayer.},
author = {Leung JJ, Warnan J, Nam DH, Zhang JZ, Willkomm J, Reisner E.},
journal = {Chem Sci},
year = {2017},
doi = {10.1039/c7sc01277b},
pmid = {28970903}
}
@article{lin119289,
title = {nifPred: Proteome-Wide Identification and Categorization of Nitrogen-Fixation Proteins of Diaztrophs Based on Composition-Transition-Distribution Features Using Support Vector Machine.},
author = {Meher PK, Sahu TK, Mohanty J, Gahoi S, Purru S, Grover M, Rao AR.},
journal = {Front Microbiol},
year = {2018},
doi = {10.3389/fmicb.2018.01100},
pmid = {29896173}
}
@article{lin119358,
title = {Biogeochemical Cycling by a Low-Diversity Microbial Community in Deep Groundwater.},
author = {Bell E, Lamminmaki T, Alneberg J, Andersson AF, Qian C, Xiong W, Hettich RL, Balmer L, Frutschi M, Sommer G, Bernier-Latmani R.},
journal = {Front Microbiol},
year = {2018},
doi = {10.3389/fmicb.2018.02129},
pmid = {30245678}
}
@article{lin119353,
title = {A gas breathing hydrogen/air biofuel cell comprising a redox polymer/hydrogenase-based bioanode.},
author = {Szczesny J, Markovic N, Conzuelo F, Zacarias S, Pereira IAC, Lubitz W, Plumere N, Schuhmann W, Ruff A.},
journal = {Nat Commun},
year = {2018},
doi = {10.1038/s41467-018-07137-6},
pmid = {30413708}
}
@article{lin119293,
title = {Anaerobic Degradation of the Plant Sugar Sulfoquinovose Concomitant With H2S Production: Escherichia coli K-12 and Desulfovibrio sp. Strain DF1 as Co-culture Model.},
author = {Burrichter A, Denger K, Franchini P, Huhn T, Muller N, Spiteller D, Schleheck D.},
journal = {Front Microbiol},
year = {2018},
doi = {10.3389/fmicb.2018.02792},
pmid = {30546350}
}
@article{lin119336,
title = {Pyrite formation from FeS and H2S is mediated through microbial redox activity.},
author = {Thiel J, Byrne JM, Kappler A, Schink B, Pester M.},
journal = {Proc Natl Acad Sci U S A},
year = {2019},
doi = {10.1073/pnas.1814412116},
pmid = {30886102}
}
@article{lin10050,
title = {A novel biological sulfur reduction process for mercury-contaminated wastewater treatment.},
author = {Wang J, Hong Y, Lin Z, Zhu C, Da J, Chen G, Jiang F},
journal = {Water Res},
year = {2019},
doi = {10.1016/j.watres.2019.05.066},
pmid = {31154126}
}
@article{lin119285,
title = {Cross-Feeding between Members of Thauera spp. and Rhodococcus spp. Drives Quinoline-Denitrifying Degradation in a Hypoxic Bioreactor.},
author = {Wu X, Wu X, Li J, Wu Q, Ma Y, Sui W, Zhao L, Zhang X.},
journal = {mSphere},
year = {2020},
doi = {10.1128/msphere.00246-20},
pmid = {32350091}
}
@article{lin119352,
title = {Genome-Resolved Metagenomics and Detailed Geochemical Speciation Analyses Yield New Insights into Microbial Mercury Cycling in Geothermal Springs.},
author = {Gionfriddo CM, Stott MB, Power JF, Ogorek JM, Krabbenhoft DP, Wick R, Holt K, Chen LX, Thomas BC, Banfield JF, Moreau JW.},
journal = {Appl Environ Microbiol},
year = {2020},
doi = {10.1128/aem.00176-20},
pmid = {32414793}
}
@article{lin119335,
title = {Exploring the upper pH limits of nitrite oxidation: diversity, ecophysiology, and adaptive traits of haloalkalitolerant Nitrospira.},
author = {Daebeler A, Kitzinger K, Koch H, Herbold CW, Steinfeder M, Schwarz J, Zechmeister T, Karst SM, Albertsen M, Nielsen PH, Wagner M, Daims H.},
journal = {ISME J},
year = {2020},
doi = {10.1038/s41396-020-0724-1},
pmid = {32709974}
}
@article{lin119311,
title = {Nickel complexation as an innovative approach for nickel-cobalt selective recovery using sulfate-reducing bacteria.},
author = {Liu Y, Serrano A, Wyman V, Marcellin E, Southam G, Vaughan J, Villa-Gomez D.},
journal = {J Hazard Mater},
year = {2021},
doi = {10.1016/j.jhazmat.2020.123506},
pmid = {32712361}
}
@article{lin119273,
title = {Awakening the Secondary Metabolite Pathways of Promicromonospora kermanensis Using Physicochemical and Biological Elicitors.},
author = {Mohammadipanah F, Kermani F, Salimi F.},
journal = {Appl Biochem Biotechnol},
year = {2020},
doi = {10.1007/s12010-020-03361-3},
pmid = {32715413}
}
@article{lin119322,
title = {Multiomics Study of Gut Bacteria and Host Metabolism in Irritable Bowel Syndrome and Depression Patients.},
author = {Xu C, Jia Q, Zhang L, Wang Z, Zhu S, Wang X, Liu Y, Li M, Zhang J, Wang X, Zhang J, Sun Q, Wang K, Zhu H, Duan L.},
journal = {Front Cell Infect Microbiol},
year = {2020},
doi = {10.3389/fcimb.2020.580980},
pmid = {33194817}
}
@article{lin119295,
title = {Quantitative comparison of the biomass-degrading enzyme repertoires of five filamentous fungi.},
author = {Arntzen MO, Bengtsson O, Varnai A, Delogu F, Mathiesen G, Eijsink VGH.},
journal = {Sci Rep},
year = {2020},
doi = {10.1038/s41598-020-75217-z},
pmid = {33219291}
}
@article{lin119280,
title = {Ecophysiological Features Shape the Distribution of Prophages and CRISPR in Sulfate Reducing Prokaryotes.},
author = {Orellana R, Arancibia A, Badilla L, Acosta J, Arancibia G, Escar R, Ferrada G, Seeger M.},
journal = {Microorganisms},
year = {2021},
doi = {10.3390/microorganisms9050931},
pmid = {33925267}
}
@article{lin119329,
title = {Microbial Degradation of Citric Acid in Low Level Radioactive Waste Disposal: Impact on Biomineralization Reactions.},
author = {Byrd N, Lloyd JR, Small JS, Taylor F, Bagshaw H, Boothman C, Morris K.},
journal = {Front Microbiol},
year = {2021},
doi = {10.3389/fmicb.2021.565855},
pmid = {33995289}
}
@article{lin119296,
title = {Comprehensive Comparative Genomics and Phenotyping of Methylobacterium Species.},
author = {Alessa O, Ogura Y, Fujitani Y, Takami H, Hayashi T, Sahin N, Tani A.},
journal = {Front Microbiol},
year = {2021},
doi = {10.3389/fmicb.2021.740610},
pmid = {34737731}
}
@article{lin119284,
title = {A novel SfaNI-like restriction-modification system in Caldicellulosiruptor extents the genetic engineering toolbox for this genus.},
author = {Swinnen S, Zurek C, Kramer M, Heger RM, Domeyer JE, Ziegler J, Svetlitchnyi VA, Laufer A.},
journal = {PLoS One},
year = {2022},
doi = {10.1371/journal.pone.0279562},
pmid = {36580476}
}
@article{lin119310,
title = {Augmenting the Performance of Hydrogenase for Aerobic Photocatalytic Hydrogen Evolution via Solvent Tuning.},
author = {Allan MG, Pichon T, McCune JA, Cavazza C, Le Goff A, Kuhnel MF, Kuhnel MF.},
journal = {Angew Chem Int Ed Engl},
year = {2023},
doi = {10.1002/anie.202219176},
pmid = {36786366}
}
@article{lin119271,
title = {A novel interdomain consortium from a Costa Rican oil well composed of Methanobacterium cahuitense sp. nov. and Desulfomicrobium aggregans sp. nov.},
author = {Dengler L, Meier J, Klingl A, Nissl L, Bellack A, Grohmann D, Rachel R, Huber H.},
journal = {Arch Microbiol},
year = {2023},
doi = {10.1007/s00203-023-03533-9},
pmid = {37055657}
}
@article{lin119318,
title = {Generation of zero-valent sulfur from dissimilatory sulfate reduction in sulfate-reducing microorganisms.},
author = {Wang S, Lu Q, Liang Z, Yu X, Lin M, Mai B, Qiu R, Shu W, He Z, Wall JD.},
journal = {Proc Natl Acad Sci U S A},
year = {2023},
doi = {10.1073/pnas.2220725120},
pmid = {37155857}
}
@article{lin119309,
title = {Promising approaches for the assembly of the catalytically active, recombinant Desulfomicrobium baculatum hydrogenase with substitutions at the active site.},
author = {Witkowska M, Jedrzejczak RP, Joachimiak A, Cavdar O, Malankowska A, Skowron PM, Zylicz-Stachula A.},
journal = {Microb Cell Fact},
year = {2023},
doi = {10.1186/s12934-023-02127-w},
pmid = {37479997}
}
@article{lin119321,
title = {Harnessing Fermentation May Enhance the Performance of Biological Sulfate-Reducing Bioreactors.},
author = {Hessler T, Harrison STL, Banfield JF, Huddy RJ.},
journal = {Environ Sci Technol},
year = {2024},
doi = {10.1021/acs.est.3c04187},
pmid = {38301118}
}
@article{lin119313,
title = {Electrostatic [FeFe]-hydrogenase-carbon nitride assemblies for efficient solar hydrogen production.},
author = {Liu Y, Pulignani C, Webb S, Cobb SJ, Rodriguez-Jimenez S, Kim D, Milton RD, Reisner E.},
journal = {Chem Sci},
year = {2024},
doi = {10.1039/d4sc00640b},
pmid = {38665532}
}
@article{lin119270,
title = {Methylobacterium nigriterrae sp. nov., isolated from black soil.},
author = {Chen LB, OuYang YT, Liu L, Jin PJ, Huang RR, Pan WY, Wang Y, Xing JY, She TT, Jiao JY, Wang S, Li WJ.},
journal = {Antonie Van Leeuwenhoek},
year = {2024},
doi = {10.1007/s10482-024-01981-x},
pmid = {38806744}
}
@article{lin119334,
title = {Engineering of bespoke photosensitiser-microbe interfaces for enhanced semi-artificial photosynthesis.},
author = {Bishara Robertson IL, Zhang H, Reisner E, Butt JN, Jeuken LJC.},
journal = {Chem Sci},
year = {2024},
doi = {10.1039/d4sc00864b},
pmid = {38966358}
}
@article{lin119274,
title = {Characterization of the metabolism of the yeast Yarrowia lipolytica growing as a biofilm.},
author = {Jenjitwanich A, Marx H, Sauer M.},
journal = {FEMS Microbes},
year = {2024},
doi = {10.1093/femsmc/xtae026},
pmid = {39529679}
}
@article{lin119314,
title = {Minimal changes in microbial abundances and diversity over 7 years of emplacement for modules of compacted bentonite exposed to natural groundwater.},
author = {Sidhu HS, Engel K, Ford SE, Keech P, Behazin M, Binns WJ, Srikanthan N, Simpson MJ, Neufeld JD, Slater GF.},
journal = {Appl Environ Microbiol},
year = {2025},
doi = {10.1128/aem.01950-24},
pmid = {39998254}
}
@article{lin119312,
title = {Unraveling the source of corrosive microorganisms from fracturing water to flowback water in shale gas field: evidence from gene sequencing and corrosion tests.},
author = {Wang Y, Wen S, Zhang S, Tang Y, Yuan X, Guan F, Duan J.},
journal = {Front Microbiol},
year = {2025},
doi = {10.3389/fmicb.2025.1552006},
pmid = {40606148}
}
@article{lin119272,
title = {Metabolic shifts induced by pH variation in Yarrowia lipolytica biofilm.},
author = {Jenjitwanich A, Marx H, Sauer M.},
journal = {FEMS Microbiol Lett},
year = {2025},
doi = {10.1093/femsle/fnaf101},
pmid = {40996457}
}