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    title   = {Emendation of genus Achromobacter and Achromobacter xylosoxidans (Yabuuchi and Yano) and proposal of Achromobacter ruhlandii (Packer and Vishniac) comb. nov., Achromobacter piechaudii (Kiredjian et al.) comb. nov., and Achromobacter xylosoxidans subsp. denitrificans (Ruger and Tan) comb. nov.},    
    author  = {Yabuuchi E, Kawamura Y, Kosako Y, Ezaki T},    
    journal = {Microbiol Immunol},    
    year    = {1998},    
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    title   = {Cytoplasmic expression of the Achromobacter xylosoxidans blue copper nitrite reductase in Escherichia coli and characterisation of the recombinant protein.},    
    author  = {Ho WH, Ooi BL, Jorgensen AM, Borg L, Jespersen LL, Christensen HE},    
    journal = {Protein Expr Purif},    
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    doi     = {10.1016/j.pep.2003.08.010},    
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    title   = {Fluorescence in situ hybridization for rapid identification of Achromobacter xylosoxidans and Alcaligenes faecalis recovered from cystic fibrosis patients.},    
    author  = {Wellinghausen N, Wirths B, Poppert S.},    
    journal = {J Clin Microbiol},    
    year    = {2006},    
    doi     = {10.1128/jcm.00508-06},    
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    title   = {Evaluation of matrix-assisted laser desorption ionization-time-of-flight mass spectrometry in comparison to 16S rRNA gene sequencing for species identification of nonfermenting bacteria.},    
    author  = {Mellmann A, Cloud J, Maier T, Keckevoet U, Ramminger I, Iwen P, Dunn J, Hall G, Wilson D, Lasala P, Kostrzewa M, Harmsen D.},    
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    year    = {2008},    
    doi     = {10.1128/jcm.00157-08},    
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    title   = {Low rates of Pseudomonas aeruginosa misidentification in isolates from cystic fibrosis patients.},    
    author  = {Kidd TJ, Ramsay KA, Hu H, Bye PT, Elkins MR, Grimwood K, Harbour C, Marks GB, Nissen MD, Robinson PJ, Rose BR, Sloots TP, Wainwright CE, Bell SC, ACPinCF Investigators.},    
    journal = {J Clin Microbiol},    
    year    = {2009},    
    doi     = {10.1128/jcm.00014-09},    
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    title   = {Conjugative Type 4 secretion system of a novel large plasmid from the chemoautotroph Tetrathiobacter kashmirensis and construction of shuttle vectors for Alcaligenaceae.},    
    author  = {Dam B, Ghosh W, Das Gupta SK.},    
    journal = {Appl Environ Microbiol},    
    year    = {2009},    
    doi     = {10.1128/aem.02521-08},    
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    @article{lin824,
    title   = {Parapusillimonas granuli gen. nov., sp. nov., isolated from granules from a wastewater-treatment bioreactor.},    
    author  = {Kim YJ, Kim MK, Im WT, Srinivasan S, Yang DC},    
    journal = {Int J Syst Evol Microbiol},    
    year    = {2009},    
    doi     = {10.1099/ijs.0.009720-0},    
    pmid    = {19671719}        
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    @article{lin414817,
    title   = {Pseudomonas oleovorans subsp. lubricantis subsp. nov., and reclassification of Pseudomonas pseudoalcaligenes ATCC 17440T as later synonym of Pseudomonas oleovorans ATCC 8062 T.},    
    author  = {Saha R, Sproer C, Beck B, Bagley S.},    
    journal = {Curr Microbiol},    
    year    = {2010},    
    doi     = {10.1007/s00284-009-9540-6},    
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    title   = {Achromobacter xylosoxidans respiratory tract infection in cystic fibrosis patients.},    
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    journal = {Eur J Clin Microbiol Infect Dis},    
    year    = {2011},    
    doi     = {10.1007/s10096-011-1182-5},    
    pmid    = {21279730}        
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    @article{lin64470,
    title   = {Multilocus sequence analysis of isolates of Achromobacter from patients with cystic fibrosis reveals infecting species other than Achromobacter xylosoxidans.},    
    author  = {Ridderberg W, Wang M, Norskov-Lauritsen N.},    
    journal = {J Clin Microbiol},    
    year    = {2012},    
    doi     = {10.1128/jcm.00728-12},    
    pmid    = {22675125}        
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    title   = {OXA-258 from Achromobacter ruhlandii: a species-specific marker.},    
    author  = {Papalia M, Almuzara M, Cejas D, Traglia G, Ramirez MS, Galanternik L, Vay C, Gutkind G, Radice M.},    
    journal = {J Clin Microbiol},    
    year    = {2013},    
    doi     = {10.1128/jcm.03043-12},    
    pmid    = {23467601}        
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    @article{lin64430,
    title   = {Complete genome sequence of the cystic fibrosis pathogen Achromobacter xylosoxidans NH44784-1996 complies with important pathogenic phenotypes.},    
    author  = {Jakobsen TH, Hansen MA, Jensen PO, Hansen L, Riber L, Cockburn A, Kolpen M, Ronne Hansen C, Ridderberg W, Eickhardt S, Hansen M, Kerpedjiev P, Alhede M, Qvortrup K, Burmolle M, Moser C, Kuhl M, Ciofu O, Givskov M, Sorensen SJ, Hoiby N, Bjarnsholt T.},    
    journal = {PLoS One},    
    year    = {2013},    
    doi     = {10.1371/journal.pone.0068484},    
    pmid    = {23894309}        
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    @article{lin64437,
    title   = {Poorly processed reusable surface disinfection tissue dispensers may be a source of infection.},    
    author  = {Kampf G, Degenhardt S, Lackner S, Jesse K, von Baum H, Ostermeyer C.},    
    journal = {BMC Infect Dis},    
    year    = {2014},    
    doi     = {10.1186/1471-2334-14-37},    
    pmid    = {24447780}        
    }
    @article{lin64429,
    title   = {Isolation and characterization of numerous novel phages targeting diverse strains of the ubiquitous and opportunistic pathogen Achromobacter xylosoxidans.},    
    author  = {Wittmann J, Dreiseikelmann B, Rohde C, Rohde M, Sikorski J.},    
    journal = {PLoS One},    
    year    = {2014},    
    doi     = {10.1371/journal.pone.0086935},    
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    title   = {Efficacy of surface disinfectant cleaners against emerging highly resistant gram-negative bacteria.},    
    author  = {Reichel M, Schlicht A, Ostermeyer C, Kampf G.},    
    journal = {BMC Infect Dis},    
    year    = {2014},    
    doi     = {10.1186/1471-2334-14-292},    
    pmid    = {24885029}        
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    @article{lin823,
    title   = {Genomic insights into intrinsic and acquired drug resistance mechanisms in Achromobacter xylosoxidans.},    
    author  = {Hu Y, Zhu Y, Ma Y, Liu F, Lu N, Yang X, Luan C, Yi Y, Zhu B},    
    journal = {Antimicrob Agents Chemother},    
    year    = {2014},    
    doi     = {10.1128/AAC.04260-14},    
    pmid    = {25487802}        
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    @article{lin414819,
    title   = {Resistome diversity in cattle and the environment decreases during beef production.},    
    author  = {Noyes NR, Yang X, Linke LM, Magnuson RJ, Dettenwanger A, Cook S, Geornaras I, Woerner DE, Gow SP, McAllister TA, Yang H, Ruiz J, Jones KL, Boucher CA, Morley PS, Belk KE.},    
    journal = {Elife},    
    year    = {2016},    
    doi     = {10.7554/elife.13195},    
    pmid    = {26952213}        
    }
    @article{lin64459,
    title   = {Differential Impacts of Willow and Mineral Fertilizer on Bacterial Communities and Biodegradation in Diesel Fuel Oil-Contaminated Soil.},    
    author  = {Leewis MC, Uhlik O, Fraraccio S, McFarlin K, Kottara A, Glover C, Macek T, Leigh MB.},    
    journal = {Front Microbiol},    
    year    = {2016},    
    doi     = {10.3389/fmicb.2016.00837},    
    pmid    = {27313574}        
    }
    @article{lin64451,
    title   = {The Identification and Differentiation between Burkholderia mallei and Burkholderia pseudomallei Using One Gene Pyrosequencing.},    
    author  = {Gilling DH, Luna VA, Pflugradt C.},    
    journal = {Int Sch Res Notices},    
    year    = {2014},    
    doi     = {10.1155/2014/109583},    
    pmid    = {27350960}        
    }
    @article{lin64472,
    title   = {Achromobacter Species Isolated from Cystic Fibrosis Patients Reveal Distinctly Different Biofilm Morphotypes.},    
    author  = {Nielsen SM, Norskov-Lauritsen N, Bjarnsholt T, Meyer RL.},    
    journal = {Microorganisms},    
    year    = {2016},    
    doi     = {10.3390/microorganisms4030033},    
    pmid    = {27681927}        
    }
    @article{lin822,
    title   = {Achromobacter aloeverae sp. nov., isolated from the root of Aloe vera (L.) Burm.f.},    
    author  = {Kuncharoen N, Muramatsu Y, Shibata C, Kamakura Y, Nakagawa Y, Tanasupawat S},    
    journal = {Int J Syst Evol Microbiol},    
    year    = {2017},    
    doi     = {10.1099/ijsem.0.001566},    
    pmid    = {27902206}        
    }
    @article{lin64441,
    title   = {Biocidal efficacy of multipurpose solutions against Gram-negative organisms associated with corneal infiltrative events.},    
    author  = {Callahan D, Kovacs C, Lynch S, Rah M.},    
    journal = {Clin Exp Optom},    
    year    = {2017},    
    doi     = {10.1111/cxo.12509},    
    pmid    = {28194876}        
    }
    @article{lin821,
    title   = {Sulfur oxidation by Achromobacter xylosoxidans strain wsp05 reveals ecological widening over which thiotrophs are distributed.},    
    author  = {Jadhav K, Jadhav I},    
    journal = {World J Microbiol Biotechnol},    
    year    = {2017},    
    doi     = {10.1007/s11274-017-2359-6},    
    pmid    = {28975472}        
    }
    @article{lin64469,
    title   = {A practical molecular identification of nonfermenting Gram-negative bacteria from cystic fibrosis.},    
    author  = {Capizzani CPDC, Cacador NC, Marques EA, Levy CE, Tonani L, Torres LAGMM, Darini ALDC.},    
    journal = {Braz J Microbiol},    
    year    = {2018},    
    doi     = {10.1016/j.bjm.2017.07.002},    
    pmid    = {29157900}        
    }
    @article{lin64444,
    title   = {Derivatives (halogen, nitro and amino) of 8-hydroxyquinoline with highly potent antimicrobial and antioxidant activities.},    
    author  = {Cherdtrakulkiat R, Boonpangrak S, Sinthupoom N, Prachayasittikul S, Ruchirawat S, Prachayasittikul V.},    
    journal = {Biochem Biophys Rep},    
    year    = {2016},    
    doi     = {10.1016/j.bbrep.2016.03.014},    
    pmid    = {29214226}        
    }
    @article{lin64468,
    title   = {Leukotriene B<sub>4</sub> is essential for lung host defence and alpha-defensin-1 production during Achromobacter xylosoxidans infection.},    
    author  = {Prado MKB, Locachevic GA, Zoccal KF, Paula-Silva FWG, Fontanari C, Ferreira JC, Pereira PAT, Gardinassi LG, Ramos SG, Sorgi CA, Darini ALC, Faccioli LH.},    
    journal = {Sci Rep},    
    year    = {2017},    
    doi     = {10.1038/s41598-017-17993-9},    
    pmid    = {29247243}        
    }
    @article{lin414813,
    title   = {Flavobacterium kingsejongi sp. nov., a carotenoid-producing species isolated from Antarctic penguin faeces.},    
    author  = {Choi JY, Kim JH, Lee PC.},    
    journal = {Int J Syst Evol Microbiol},    
    year    = {2018},    
    doi     = {10.1099/ijsem.0.002610},    
    pmid    = {29458488}        
    }
    @article{lin64440,
    title   = {Proteomic identification of Axc, a novel beta-lactamase with carbapenemase activity in a meropenem-resistant clinical isolate of Achromobacter xylosoxidans.},    
    author  = {Fleurbaaij F, Henneman AA, Corver J, Knetsch CW, Knetsch CW, Smits WK, Nauta ST, Giera M, Dragan I, Kumar N, Lawley TD, Verhoeven A, van Leeuwen HC, Kuijper EJ, Hensbergen PJ.},    
    journal = {Sci Rep},    
    year    = {2018},    
    doi     = {10.1038/s41598-018-26079-z},    
    pmid    = {29802257}        
    }
    @article{lin414818,
    title   = {Metabolic Modeling of Cystic Fibrosis Airway Communities Predicts Mechanisms of Pathogen Dominance.},    
    author  = {Henson MA, Orazi G, Phalak P, O'Toole GA.},    
    journal = {mSystems},    
    year    = {2019},    
    doi     = {10.1128/msystems.00026-19},    
    pmid    = {31020043}        
    }
    @article{lin64450,
    title   = {A stability study of amphotericin B, colistin and tobramycin in a hydrophilic suspension commonly used for selective decontamination of the digestive tract by HPLC and in vitro potency measurements.},    
    author  = {Pfeifer C, Noll S, Gerecke H, Fassauer G, Jira T, Remane Y, Vogel J, Frontini R, Reinhardt R.},    
    journal = {Eur J Hosp Pharm},    
    year    = {2017},    
    doi     = {10.1136/ejhpharm-2016-000931},    
    pmid    = {31156945}        
    }
    @article{lin64439,
    title   = {13-(2-Methylbenzyl) Berberine Is a More Potent Inhibitor of MexXY-Dependent Aminoglycoside Resistance than Berberine.},    
    author  = {Kotani K, Matsumura M, Morita Y, Tomida J, Kutsuna R, Nishino K, Yasuike S, Kawamura Y.},    
    journal = {Antibiotics (Basel)},    
    year    = {2019},    
    doi     = {10.3390/antibiotics8040212},    
    pmid    = {31698691}        
    }
    @article{lin64461,
    title   = {Draft Genome Sequence of an Unusually Multidrug-Resistant Strain of Achromobacter xylosoxidans from a Blood Isolate.},    
    author  = {Choi H, Jinadatha C, Chatterjee P, Allton Y, Navarathna DH.},    
    journal = {Microbiol Resour Announc},    
    year    = {2020},    
    doi     = {10.1128/mra.00194-20},    
    pmid    = {32467264}        
    }
    @article{lin64462,
    title   = {Duplex real-time PCR assay for the simultaneous detection of <i>Achromobacter xylosoxidans</i> and <i>Achromobacter</i> spp.},    
    author  = {Price EP, Soler Arango V, Kidd TJ, Fraser TA, Nguyen TK, Bell SC, Sarovich DS.},    
    journal = {Microb Genom},    
    year    = {2020},    
    doi     = {10.1099/mgen.0.000406},    
    pmid    = {32667877}        
    }
    @article{lin820,
    title   = {Achromobacter aestuarii sp. nov., Isolated from an Estuary.},    
    author  = {Kim SC, Chung SO, Lee HJ},    
    journal = {Curr Microbiol},    
    year    = {2020},    
    doi     = {10.1007/s00284-020-02231-9},    
    pmid    = {33033853}        
    }
    @article{lin64448,
    title   = {Bacterial Interference With Lactate Dehydrogenase Assay Leads to an Underestimation of Cytotoxicity.},    
    author  = {Van den Bossche S, Vandeplassche E, Ostyn L, Coenye T, Crabbe A.},    
    journal = {Front Cell Infect Microbiol},    
    year    = {2020},    
    doi     = {10.3389/fcimb.2020.00494},    
    pmid    = {33042868}        
    }
    @article{lin64438,
    title   = {SSNOMBACTER: A collection of scattering-type scanning near-field optical microscopy and atomic force microscopy images of bacterial cells.},    
    author  = {Lucidi M, Tranca DE, Nichele L, Unay D, Stanciu GA, Visca P, Holban AM, Hristu R, Cincotti G, Stanciu SG.},    
    journal = {Gigascience},    
    year    = {2020},    
    doi     = {10.1093/gigascience/giaa129},    
    pmid    = {33231675}        
    }
    @article{lin414815,
    title   = {The human respiratory tract microbial community structures in healthy and cystic fibrosis infants.},    
    author  = {Pust MM, Wiehlmann L, Davenport C, Rudolf I, Dittrich AM, Tummler B.},    
    journal = {NPJ Biofilms Microbiomes},    
    year    = {2020},    
    doi     = {10.1038/s41522-020-00171-7},    
    pmid    = {33319812}        
    }
    @article{lin414816,
    title   = {Biodegradation of Unpretreated Low-Density Polyethylene (LDPE) by <i>Stenotrophomonas</i> sp. and <i>Achromobacter</i> sp., Isolated From Waste Dumpsite and Drilling Fluid.},    
    author  = {Dey AS, Bose H, Mohapatra B, Sar P.},    
    journal = {Front Microbiol},    
    year    = {2020},    
    doi     = {10.3389/fmicb.2020.603210},    
    pmid    = {33391224}        
    }
    @article{lin64442,
    title   = {Role of RND Efflux Pumps in Drug Resistance of Cystic Fibrosis Pathogens.},    
    author  = {Scoffone VC, Trespidi G, Barbieri G, Irudal S, Perrin E, Buroni S.},    
    journal = {Antibiotics (Basel)},    
    year    = {2021},    
    doi     = {10.3390/antibiotics10070863},    
    pmid    = {34356783}        
    }
    @article{lin64434,
    title   = {Role of Efflux in Antibiotic Resistance of <i>Achromobacter xylosoxidans</i> and <i>Achromobacter insuavis</i> Isolates From Patients With Cystic Fibrosis.},    
    author  = {Chalhoub H, Kampmeier S, Kahl BC, Van Bambeke F.},    
    journal = {Front Microbiol},    
    year    = {2022},    
    doi     = {10.3389/fmicb.2022.762307},    
    pmid    = {35418957}        
    }
    @article{lin414814,
    title   = {Polyhydroxyalkanoate Production by <i>Caenibius tardaugens</i> from Steroidal Endocrine Disruptors.},    
    author  = {Ibero J, Rivero-Buceta V, Garcia JL, Galan B.},    
    journal = {Microorganisms},    
    year    = {2022},    
    doi     = {10.3390/microorganisms10040706},    
    pmid    = {35456754}        
    }
    @article{lin414810,
    title   = {Control of a pyrimidine ribonucleotide salvage pathway in Pseudomonas oleovorans.},    
    author  = {Gill R, West TP.},    
    journal = {Arch Microbiol},    
    year    = {2022},    
    doi     = {10.1007/s00203-022-03016-3},    
    pmid    = {35689128}        
    }
    @article{lin64435,
    title   = {Characterization of the <i>Achromobacter xylosoxidans</i> Type VI Secretion System and Its Implication in Cystic Fibrosis.},    
    author  = {Le Goff M, Vastel M, Lebrun R, Mansuelle P, Diarra A, Grandjean T, Triponney P, Imbert G, Gosset P, Dessein R, Garnier F, Durand E.},    
    journal = {Front Cell Infect Microbiol},    
    year    = {2022},    
    doi     = {10.3389/fcimb.2022.859181},    
    pmid    = {35782124}        
    }
    @article{lin64447,
    title   = {Antibiotics Drive Expansion of Rare Pathogens in a Chronic Infection Microbiome Model.},    
    author  = {Varga JJ, Zhao CY, Davis JD, Hao Y, Farrell JM, Gurney JR, Voit E, Brown SP.},    
    journal = {mSphere},    
    year    = {2022},    
    doi     = {10.1128/msphere.00318-22},    
    pmid    = {35972133}        
    }
    @article{lin64433,
    title   = {The Efficacy of an N-Acetylcysteine-Antibiotic Combination Therapy on <i>Achromobacter xylosoxidans</i> in a Cystic Fibrosis Sputum/Lung Cell Model.},    
    author  = {Aiyer A, Das T, Whiteley GS, Glasbey T, Kriel FH, Farrell J, Manos J.},    
    journal = {Biomedicines},    
    year    = {2022},    
    doi     = {10.3390/biomedicines10112886},    
    pmid    = {36359406}        
    }
    @article{lin64436,
    title   = {Polymyxin Resistance and Heteroresistance Are Common in Clinical Isolates of <i>Achromobacter</i> Species and Correlate with Modifications of the Lipid A Moiety of Lipopolysaccharide.},    
    author  = {MacDonald L, Keenan S, Di Lorenzo F, Adade NE, Kenna DTD, Millar BC, Moore JE, Ramos Vivas J, Molinaro A, Valvano MA.},    
    journal = {Microbiol Spectr},    
    year    = {2023},    
    doi     = {10.1128/spectrum.03729-22},    
    pmid    = {36519943}        
    }
    @article{lin64428,
    title   = {Myxinidin-Derived Peptide against Biofilms Caused by Cystic Fibrosis Emerging Pathogens.},    
    author  = {Bellavita R, Maione A, Braccia S, Sinoca M, Galdiero S, Galdiero E, Falanga A.},    
    journal = {Int J Mol Sci},    
    year    = {2023},    
    doi     = {10.3390/ijms24043092},    
    pmid    = {36834512}        
    }
    @article{lin64467,
    title   = {Enrichment of halotolerant hydrogen-oxidizing bacteria and production of high-value-added chemical hydroxyectoine using a hybrid biological-inorganic system.},    
    author  = {Feng X, Kazama D, He S, Nakayama H, Hayashi T, Tokunaga T, Sato K, Kobayashi H.},    
    journal = {Front Microbiol},    
    year    = {2023},    
    doi     = {10.3389/fmicb.2023.1254451},    
    pmid    = {37711693}        
    }
    @article{lin64466,
    title   = {Complete genome sequence of an <i>Achromobacter xylosoxidans</i> strain H1_3_1 isolated from a hybrid biological-inorganic system reactor.},    
    author  = {Feng X, Kazama D, Sato K, Kobayashi H.},    
    journal = {Microbiol Resour Announc},    
    year    = {2023},    
    doi     = {10.1128/mra.00612-23},    
    pmid    = {37889011}        
    }
    @article{lin414811,
    title   = {Inhibition of Aflatoxin Production in <i>Aspergillus flavus</i> by a <i>Klebsiella</i> sp. and Its Metabolite Cyclo(l-Ala-Gly).},    
    author  = {Sakuda S, Sunaoka M, Terada M, Sakoda A, Ishijima N, Hakoshima N, Uchida K, Enomoto H, Furukawa T.},    
    journal = {Toxins (Basel)},    
    year    = {2024},    
    doi     = {10.3390/toxins16030141},    
    pmid    = {38535807}        
    }
    @article{lin414812,
    title   = {Genomic and environmental controls on Castellaniella biogeography in an anthropogenically disturbed subsurface.},    
    author  = {Goff JL, Szink EG, Durrence KL, Lui LM, Nielsen TN, Kuehl JV, Hunt KA, Chandonia JM, Huang J, Thorgersen MP, Poole FL, Stahl DA, Chakraborty R, Deutschbauer AM, Arkin AP, Adams MWW.},    
    journal = {Environ Microbiome},    
    year    = {2024},    
    doi     = {10.1186/s40793-024-00570-9},    
    pmid    = {38671539}        
    }
    @article{lin64432,
    title   = {Biocidal Efficacies of Contact Lens Disinfecting Solutions Against Gram-Negative Organisms Associated with Lens Case-Associated Corneal Infiltrative Events.},    
    author  = {Corwin-Buell J, Callahan D, McGrath D, Millard K, Mosehauer G, Rah MJ, Phatak N.},    
    journal = {Clin Ophthalmol},    
    year    = {2025},    
    doi     = {10.2147/opth.s477777},    
    pmid    = {39967786}        
    }
