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year = {2024},
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title = {Isolation and characterization of new bacteriophages active against Clostridium tyrobutyricum and their role in preventing the late blowing defect of cheese},
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year = {2024},
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title = {Hyperspectral imaging through vacuum packaging for monitoring cheese biochemical transformation caused by Clostridium metabolism},
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title = {Effect of NaCl and ripening time on spore germination by measuring the hydrogen production of Clostridium tyrobutyricum UC7086 in a hard cheese model},
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journal = {Int Dairy J},
year = {2022},
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title = {Development of a new multiplex quantitative real-time polymerase chain reaction method for Clostridium butyricum, Clostridium sporogenes and Clostridium tyrobutyricum detection in cheese},
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journal = {Lebensm Wiss Technol},
year = {2022},
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title = {Metabolic engineering of Saccharomyces cerevisiae for the biosynthesis of ethyl crotonate},
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title = {Effect of acid based additive treatment of low dry matter grass crops on losses and silage quality in bunker silos},
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journal = {Anim Feed Sci Technol},
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title = {Losses and grass silage quality in bunker silos compacted by tractor versus wheel loader},
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journal = {Anim Feed Sci Technol},
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doi = {10.1016/j.anifeedsci.2020.114523},
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title = {Inhibition of Clostridium tyrobutyricum by Streptococcus macedonicus ACA-DC 198 under conditions mimicking Kasseri cheese production and ripening},
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journal = {Food Microbiol},
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doi = {10.1006/fmic.2001.0475},
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year = {1975},
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year = {1985},
doi = {10.1016/s0769-2609(85)80008-9},
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year = {1987},
doi = {10.1128/aem.53.9.2165-2170.1987},
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title = {Reductions of 2-enals, dehydrogenation of saturated aldehydes and their racemisation.},
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journal = {Biol Chem Hoppe Seyler},
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journal = {Ann Inst Pasteur Microbiol},
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journal = {Ciba Found Symp},
year = {1985},
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title = {Structure of enoate reductase from a Clostridium tyrobutyricum (C. spec. La1).},
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journal = {Biol Chem Hoppe Seyler},
year = {1985},
doi = {10.1515/bchm3.1985.366.1.463},
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title = {Antagonistic activity of Debaryomyces hansenii towards Clostridium tyrobutyricum and Cl. butyricum.},
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journal = {J Dairy Res},
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doi = {10.1017/s0022029900032684},
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title = {A high-molecular-mass cell wall protein released from Clostridium tyrobutyricum by heat treatment.},
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journal = {FEBS Lett},
year = {1984},
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pmid = {6468663}
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title = {Isolation and identification of anaerobic contaminants from a machine for producing processed cheese.},
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journal = {Rev Argent Microbiol},
year = {1982},
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journal = {Can J Microbiol},
year = {1980},
doi = {10.1139/m80-053},
pmid = {7407710}
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title = {Identification of Clostridium tyrobutyricum as the causative agent of late blowing in cheese by species-specific PCR amplification.},
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journal = {Appl Environ Microbiol},
year = {1995},
doi = {10.1128/aem.61.8.2919-2924.1995},
pmid = {7487024}
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@article{lin107129,
title = {Nonradioactive colony hybridization assay for detection and enumeration of enterotoxigenic Clostridium perfringens in raw beef.},
author = {Baez LA, Juneja VK.},
journal = {Appl Environ Microbiol},
year = {1995},
doi = {10.1128/aem.61.2.807-810.1995},
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title = {Iron removal from milk and other nutrient media with a chelating resin.},
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journal = {J Dairy Sci},
year = {1995},
doi = {10.3168/jds.s0022-0302(95)76615-2},
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title = {Purification and characterization of the NADH-dependent (S)-specific 3-oxobutyryl-CoA reductase from Clostridium tyrobutyricum.},
author = {Bayer M, Gunther H, Simon H.},
journal = {Arch Microbiol},
year = {1995},
doi = {10.1007/bf00393386},
pmid = {7763138}
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title = {Purification and characterization of an (S)-3-hydroxycarboxylate oxidoreductase from Clostridium tyrobutyricum.},
author = {Bayer M, Gunther H, Simon H.},
journal = {Appl Microbiol Biotechnol},
year = {1994},
doi = {10.1007/bf00170222},
pmid = {7765819}
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title = {Production of monoclonal antibodies against the outer cell wall of Clostridium tyrobutyricum.},
author = {Talbot F, Robreau G, Gueguen F, Malcoste R},
journal = {Hybridoma},
year = {1994},
doi = {10.1089/hyb.1994.13.45},
pmid = {8200658}
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title = {Antimicrobial compounds from Lactobacillus casei and Lactobacillus helveticus.},
author = {Vescovo M, Scolari GL, Caravaggi L, Bottazzi V.},
journal = {New Microbiol},
year = {1993},
pmid = {8510571}
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@article{lin107130,
title = {Genetic and biochemical characterization of the Lactobacillus delbrueckii subsp. lactis bacteriophage LL-H lysin.},
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journal = {Appl Environ Microbiol},
year = {1995},
doi = {10.1128/aem.61.11.4004-4011.1995},
pmid = {8526515}
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title = {A direct PCR detection method for Clostridium tyrobutyricum spores in up to 100 milliliters of raw milk.},
author = {Herman LM, De Block JH, Waes GM.},
journal = {Appl Environ Microbiol},
year = {1995},
doi = {10.1128/aem.61.12.4141-4146.1995},
pmid = {8534081}
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@article{lin386776,
title = {[Efficiency of microbank systems for the conservation of microorganisms relevant to veterinary medicine and others which are not easy to cultivate].},
author = {Seidel KE, Gareis M.},
journal = {Berl Munch Tierarztl Wochenschr},
year = {1995},
pmid = {8593139}
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title = {EPR and Mössbauer spectroscopic studies on enoate reductase.},
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journal = {J Biol Chem},
year = {1996},
doi = {10.1074/jbc.271.31.18743},
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@article{lin107127,
title = {Purification and amino acid sequences of piscicocins V1a and V1b, two class IIa bacteriocins secreted by Carnobacterium piscicola V1 that display significantly different levels of specific inhibitory activity.},
author = {Bhugaloo-Vial P, Dousset X, Metivier A, Sorokine O, Anglade P, Boyaval P, Marion D.},
journal = {Appl Environ Microbiol},
year = {1996},
doi = {10.1128/aem.62.12.4410-4416.1996},
pmid = {8953713}
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title = {Biochemical and immunological analyses of the flagellin of Clostridium tyrobutyricum ATCC 25755.},
author = {Arnold F, Bedouet L, Batina P, Robreau G, Talbot F, Lecher P, Malcoste R},
journal = {Microbiol Immunol},
year = {1998},
doi = {10.1111/j.1348-0421.1998.tb01965.x},
pmid = {9525776}
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@article{lin386729,
title = {Partial analysis of the flagellar antigenic determinant recognized by a monoclonal antibody to Clostridium tyrobutyricum.},
author = {Bedouet L, Arnold F, Robreau G, Batina P, Talbot F, Malcoste R.},
journal = {Microbiol Immunol},
year = {1998},
doi = {10.1111/j.1348-0421.1998.tb02256.x},
pmid = {9572040}
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@article{lin8275,
title = {Evidence for an heterogeneous glycosylation of the Clostridium tyrobutyricum ATCC 25755 flagellin.},
author = {Bedouet L, Arnold F, Robreau G, Batina P, Talbot F, Binet A},
journal = {Microbios},
year = {1998},
pmid = {9853380}
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@article{lin386850,
title = {Purification and molecular characterization of the tungsten-containing formaldehyde ferredoxin oxidoreductase from the hyperthermophilic archaeon Pyrococcus furiosus: the third of a putative five-member tungstoenzyme family.},
author = {Roy R, Mukund S, Schut GJ, Dunn DM, Weiss R, Adams MW.},
journal = {J Bacteriol},
year = {1999},
doi = {10.1128/jb.181.4.1171-1180.1999},
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@article{lin8274,
title = {Cloning and sequencing of the central region of the flagellin gene from the Gram-positive bacterium Clostridium tyrobutyricum ATCC 25755.},
author = {Arnold F, Bedouet L, Batina P, Robreau G},
journal = {Microbiol Immunol},
year = {1999},
doi = {10.1111/j.1348-0421.1999.tb02365.x},
pmid = {10100740}
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@article{lin386754,
title = {Brining time effect on physicochemical and microbiological parameters in Idiazábal cheese.},
author = {Perez Elortondo FJ, Albisu M, Barcina Y.},
journal = {Int J Food Microbiol},
year = {1999},
doi = {10.1016/s0168-1605(99)00068-9},
pmid = {10490224}
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@article{lin386849,
title = {Immobilization with metal hydroxides as a means to concentrate food-borne bacteria for detection by cultural and molecular methods.},
author = {Lucore LA, Cullison MA, Jaykus LA.},
journal = {Appl Environ Microbiol},
year = {2000},
doi = {10.1128/aem.66.5.1769-1776.2000},
pmid = {10788338}
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@article{lin386753,
title = {Biochemical properties of Streptococcus macedonicus strains isolated from Greek Kasseri cheese.},
author = {Georgalaki MD, Sarantinopoulos P, Ferreira ES, De Vuyst L, Kalantzopoulos G, Tsakalidou E.},
journal = {J Appl Microbiol},
year = {2000},
doi = {10.1046/j.1365-2672.2000.01055.x},
pmid = {10792542}
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@article{lin386844,
title = {Parallel processing of substrate correlates with greater functional stability in methanogenic bioreactor communities perturbed by glucose.},
author = {Hashsham SA, Fernandez AS, Dollhopf SL, Dazzo FB, Hickey RF, Tiedje JM, Criddle CS.},
journal = {Appl Environ Microbiol},
year = {2000},
doi = {10.1128/aem.66.9.4050-4057.2000},
pmid = {10966428}
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@article{lin386727,
title = {Enoate reductases of Clostridia. Cloning, sequencing, and expression.},
author = {Rohdich F, Wiese A, Feicht R, Simon H, Bacher A.},
journal = {J Biol Chem},
year = {2001},
doi = {10.1074/jbc.m008656200},
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@article{lin386740,
title = {The impact of the quality of silage on animal health and food safety: a review.},
author = {Driehuis F, Oude Elferink SJ.},
journal = {Vet Q},
year = {2000},
doi = {10.1080/01652176.2000.9695061},
pmid = {11087133}
}
@article{lin386845,
title = {Streptococcus salivarius fimbriae are composed of a glycoprotein containing a repeated motif assembled into a filamentous nondissociable structure.},
author = {Levesque C, Vadeboncoeur C, Chandad F, Frenette M.},
journal = {J Bacteriol},
year = {2001},
doi = {10.1128/jb.183.9.2724-2732.2001},
pmid = {11292790}
}
@article{lin386842,
title = {A genomic island in Pseudomonas aeruginosa carries the determinants of flagellin glycosylation.},
author = {Arora SK, Bangera M, Lory S, Ramphal R.},
journal = {Proc Natl Acad Sci U S A},
year = {2001},
doi = {10.1073/pnas.161249198},
pmid = {11481492}
}
@article{lin107139,
title = {Metabolism of cinnamic acids by some Clostridiales and emendation of the descriptions of Clostridium aerotolerans, Clostridium celerecrescens and Clostridium xylanolyticum.},
author = {Chamkha M, Garcia JL, Labat M.},
journal = {Int J Syst Evol Microbiol},
year = {2001},
doi = {10.1099/00207713-51-6-2105},
pmid = {11760953}
}
@article{lin386736,
title = {Effective use of nisin to control Bacillus and Clostridium spoilage of a pasteurized mashed potato product.},
author = {Thomas LV, Ingram RE, Bevis HE, Davies EA, Milne CF, Delves-Broughton J.},
journal = {J Food Prot},
year = {2002},
doi = {10.4315/0362-028x-65.10.1580},
pmid = {12380742}
}
@article{lin386837,
title = {Characterization of a fourth tungsten-containing enzyme from the hyperthermophilic archaeon Pyrococcus furiosus.},
author = {Roy R, Adams MW, Adams MW.},
journal = {J Bacteriol},
year = {2002},
doi = {10.1128/jb.184.24.6952-6956.2002},
pmid = {12446645}
}
@article{lin386827,
title = {Macedocin, a food-grade lantibiotic produced by Streptococcus macedonicus ACA-DC 198.},
author = {Georgalaki MD, Van Den Berghe E, Kritikos D, Devreese B, Van Beeumen J, Kalantzopoulos G, De Vuyst L, Tsakalidou E.},
journal = {Appl Environ Microbiol},
year = {2002},
doi = {10.1128/aem.68.12.5891-5903.2002},
pmid = {12450808}
}
@article{lin386689,
title = {Extractive fermentation for butyric acid production from glucose by Clostridium tyrobutyricum.},
author = {Wu Z, Yang ST.},
journal = {Biotechnol Bioeng},
year = {2003},
doi = {10.1002/bit.10542},
pmid = {12569628}
}
@article{lin107141,
title = {Identification and characterization of two novel clostridial bacteriocins, circularin A and closticin 574.},
author = {Kemperman R, Kuipers A, Karsens H, Nauta A, Kuipers O, Kok J.},
journal = {Appl Environ Microbiol},
year = {2003},
doi = {10.1128/aem.69.3.1589-1597.2003},
pmid = {12620847}
}
@article{lin386695,
title = {Adaptation of Clostridium tyrobutyricum for enhanced tolerance to butyric acid in a fibrous-bed bioreactor.},
author = {Zhu Y, Yang ST.},
journal = {Biotechnol Prog},
year = {2003},
doi = {10.1021/bp025647x},
pmid = {12675573}
}
@article{lin8273,
title = {Inhibition of Clostridium tyrobutyricum in Vidiago cheese by Lactococcus lactis ssp. lactis IPLA 729, a nisin Z producer.},
author = {Rilla N, Martinez B, Delgado T, Rodriguez A},
journal = {Int J Food Microbiol},
year = {2003},
doi = {10.1016/s0168-1605(02)00478-6},
pmid = {12810268}
}
@article{lin107145,
title = {Functional analysis of the gene cluster involved in production of the bacteriocin circularin A by Clostridium beijerinckii ATCC 25752.},
author = {Kemperman R, Jonker M, Nauta A, Kuipers OP, Kok J.},
journal = {Appl Environ Microbiol},
year = {2003},
doi = {10.1128/aem.69.10.5839-5848.2003},
pmid = {14532033}
}
@article{lin386675,
title = {Streptococcus thermophilus 580 produces a bacteriocin potentially suitable for inhibition of Clostridium tyrobutyricum in hard cheese.},
author = {Mathot AG, Beliard E, Thuault D.},
journal = {J Dairy Sci},
year = {2003},
doi = {10.3168/jds.s0022-0302(03)73906-x},
pmid = {14594223}
}
@article{lin386667,
title = {Effect of pH on metabolic pathway shift in fermentation of xylose by Clostridium tyrobutyricum.},
author = {Zhu Y, Yang ST.},
journal = {J Biotechnol},
year = {2004},
doi = {10.1016/j.jbiotec.2004.02.006},
pmid = {15121334}
}
@article{lin386840,
title = {Flagellin from Listeria monocytogenes is glycosylated with beta-O-linked N-acetylglucosamine.},
author = {Schirm M, Kalmokoff M, Aubry A, Thibault P, Sandoz M, Logan SM.},
journal = {J Bacteriol},
year = {2004},
doi = {10.1128/jb.186.20.6721-6727.2004},
pmid = {15466023}
}
@article{lin8272,
title = {Construction and characterization of pta gene-deleted mutant of Clostridium tyrobutyricum for enhanced butyric acid fermentation.},
author = {Zhu Y, Liu X, Yang ST},
journal = {Biotechnol Bioeng},
year = {2005},
doi = {10.1002/bit.20354},
pmid = {15759261}
}
@article{lin107146,
title = {Degradation of cyanophycin by Sedimentibacter hongkongensis strain KI and Citrobacter amalonaticus strain G Isolated from an anaerobic bacterial consortium.},
author = {Obst M, Krug A, Luftmann H, Steinbuchel A.},
journal = {Appl Environ Microbiol},
year = {2005},
doi = {10.1128/aem.71.7.3642-3652.2005},
pmid = {16000772}
}
@article{lin386702,
title = {Characterization of a 3944 Da bacteriocin, produced by Enterococcus mundtii ST15, with activity against Gram-positive and Gram-negative bacteria.},
author = {De Kwaadsteniet M, Todorov SD, Knoetze H, Dicks LM.},
journal = {Int J Food Microbiol},
year = {2005},
doi = {10.1016/j.ijfoodmicro.2005.03.021},
pmid = {16102864}
}
@article{lin386671,
title = {Homologous recombination with linear DNA to insert antigenic protein in the flagellin: improvement of the Th1 immune response.},
author = {Le Moigne V, Robreau G, Mahana W.},
journal = {Microbiol Immunol},
year = {2006},
doi = {10.1111/j.1348-0421.2006.tb03768.x},
pmid = {16428871}
}
@article{lin386686,
title = {Characterization of Clostridium spp. isolated from spoiled processed cheese products.},
author = {Lycken L, Borch E.},
journal = {J Food Prot},
year = {2006},
doi = {10.4315/0362-028x-69.8.1887},
pmid = {16924914}
}
@article{lin386666,
title = {Effect of different premilking manual teat-cleaning methods on bacterial spores in milk.},
author = {Magnusson M, Christiansson A, Svensson B, Kolstrup C.},
journal = {J Dairy Sci},
year = {2006},
doi = {10.3168/jds.s0022-0302(06)72429-8},
pmid = {16960062}
}
@article{lin386662,
title = {Construction and characterization of ack deleted mutant of Clostridium tyrobutyricum for enhanced butyric acid and hydrogen production.},
author = {Liu X, Zhu Y, Yang ST.},
journal = {Biotechnol Prog},
year = {2006},
doi = {10.1021/bp060082g},
pmid = {17022663}
}
@article{lin8271,
title = {Determination of spore inactivation during thermal and pressure-assisted thermal processing using FT-IR spectroscopy.},
author = {Subramanian A, Ahn J, Balasubramaniam VM, Rodriguez-Saona L},
journal = {J Agric Food Chem},
year = {2006},
doi = {10.1021/jf0622174},
pmid = {17177574}
}
@article{lin386744,
title = {Quantitative detection of Clostridium tyrobutyricum in milk by real-time PCR.},
author = {Lopez-Enriquez L, Rodriguez-Lazaro D, Hernandez M.},
journal = {Appl Environ Microbiol},
year = {2007},
doi = {10.1128/aem.02642-06},
pmid = {17449705}
}
@article{lin386846,
title = {Genome sequence of a proteolytic (Group I) Clostridium botulinum strain Hall A and comparative analysis of the clostridial genomes.},
author = {Sebaihia M, Peck MW, Minton NP, Thomson NR, Holden MT, Mitchell WJ, Carter AT, Bentley SD, Mason DR, Crossman L, Paul CJ, Ivens A, Wells-Bennik MH, Davis IJ, Cerdeno-Tarraga AM, Churcher C, Quail MA, Chillingworth T, Feltwell T, Fraser A, Goodhead I, Hance Z, Jagels K, Larke N, Maddison M, Moule S, Mungall K, Norbertczak H, Rabbinowitsch E, Sanders M, Simmonds M, White B, Whithead S, Parkhill J.},
journal = {Genome Res},
year = {2007},
doi = {10.1101/gr.6282807},
pmid = {17519437}
}
@article{lin386649,
title = {Bactericidal effect of bovicin HC5 and nisin against Clostridium tyrobutyricum isolated from spoiled mango pulp.},
author = {de Carvalho AA, Mantovani HC, Vanetti MC.},
journal = {Lett Appl Microbiol},
year = {2007},
doi = {10.1111/j.1472-765x.2007.02150.x},
pmid = {17594463}
}
@article{lin386663,
title = {Monitoring biochemical changes in bacterial spore during thermal and pressure-assisted thermal processing using FT-IR spectroscopy.},
author = {Subramanian A, Ahn J, Balasubramaniam VM, Rodriguez-Saona L.},
journal = {J Agric Food Chem},
year = {2007},
doi = {10.1021/jf0708241},
pmid = {17907780}
}
@article{lin386676,
title = {Quality of silages from Italian farms as attested by number and identity of microbial indicators.},
author = {Rossi F, Dellaglio F.},
journal = {J Appl Microbiol},
year = {2007},
doi = {10.1111/j.1365-2672.2007.03416.x},
pmid = {17953581}
}
@article{lin386788,
title = {Clostridium scindens baiCD and baiH genes encode stereo-specific 7alpha/7beta-hydroxy-3-oxo-delta4-cholenoic acid oxidoreductases.},
author = {Kang DJ, Ridlon JM, Moore DR, Barnes S, Hylemon PB.},
journal = {Biochim Biophys Acta},
year = {2008},
doi = {10.1016/j.bbalip.2007.10.008},
pmid = {18047844}
}
@article{lin8270,
title = {Production of butyric acid from glucose and xylose with immobilized cells of Clostridium tyrobutyricum in a fibrous-bed bioreactor.},
author = {Jiang L, Wang J, Liang S, Wang X, Cen P, Xu Z},
journal = {Appl Biochem Biotechnol},
year = {2008},
doi = {10.1007/s12010-008-8305-1},
pmid = {18651247}
}
@article{lin107115,
title = {Sources of clostridia in raw milk on farms.},
author = {Julien MC, Dion P, Lafreniere C, Antoun H, Drouin P.},
journal = {Appl Environ Microbiol},
year = {2008},
doi = {10.1128/aem.00913-08},
pmid = {18757576}
}
@article{lin107126,
title = {Synergistic inactivation of spores of proteolytic Clostridium botulinum strains by high pressure and heat is strain and product dependent.},
author = {Bull MK, Olivier SA, van Diepenbeek RJ, Kormelink F, Chapman B.},
journal = {Appl Environ Microbiol},
year = {2009},
doi = {10.1128/aem.01426-08},
pmid = {19011055}
}
@article{lin386637,
title = {Butyric acid fermentation in a fibrous bed bioreactor with immobilized Clostridium tyrobutyricum from cane molasses.},
author = {Jiang L, Wang J, Liang S, Wang X, Cen P, Xu Z.},
journal = {Bioresour Technol},
year = {2009},
doi = {10.1016/j.biortech.2009.02.032},
pmid = {19297150}
}
@article{lin386635,
title = {A combination of a SEM technique and X-ray microanalysis for studying the spore germination process of Clostridium tyrobutyricum.},
author = {Bassi D, Cappa F, Cocconcelli PS.},
journal = {Res Microbiol},
year = {2009},
doi = {10.1016/j.resmic.2009.04.003},
pmid = {19393740}
}
@article{lin107144,
title = {Functions of the Clostridium acetobutylicium FabF and FabZ proteins in unsaturated fatty acid biosynthesis.},
author = {Zhu L, Cheng J, Luo B, Feng S, Lin J, Wang S, Cronan JE, Wang H.},
journal = {BMC Microbiol},
year = {2009},
doi = {10.1186/1471-2180-9-119},
pmid = {19493359}
}
@article{lin8269,
title = {Continuous hydrogen and butyric acid fermentation by immobilized Clostridium tyrobutyricum ATCC 25755: effects of the glucose concentration and hydraulic retention time.},
author = {Mitchell RJ, Kim JS, Jeon BS, Sang BI},
journal = {Bioresour Technol},
year = {2009},
doi = {10.1016/j.biortech.2009.05.046},
pmid = {19545998}
}
@article{lin386631,
title = {Detection of Clostridium tyrobutyricum spores using polyclonal antibodies and flow cytometry.},
author = {Lavilla M, Marzo I, de Luis R, Perez MD, Calvo M, Sanchez L.},
journal = {J Appl Microbiol},
year = {2010},
doi = {10.1111/j.1365-2672.2009.04435.x},
pmid = {19659701}
}
@article{lin386656,
title = {Analysis of lysozyme in cheese by immunocapture mass spectrometry.},
author = {Schneider N, Becker CM, Pischetsrieder M.},
journal = {J Chromatogr B Analyt Technol Biomed Life Sci},
year = {2010},
doi = {10.1016/j.jchromb.2009.07.040},
pmid = {19709935}
}
@article{lin386623,
title = {Selection of high affine peptide ligands for detection of Clostridium Tyrobutyricum spores.},
author = {Lavilla M, De Luis R, Perez MD, Calvo M, Sanchez L.},
journal = {J Microbiol Methods},
year = {2009},
doi = {10.1016/j.mimet.2009.09.008},
pmid = {19772877}
}
@article{lin386651,
title = {Sequence analysis of a bacteriocinogenic plasmid of Clostridium butyricum and expression of the bacteriocin gene in Escherichia coli.},
author = {Nakanishi S, Tanaka M.},
journal = {Anaerobe},
year = {2010},
doi = {10.1016/j.anaerobe.2009.10.002},
pmid = {19840859}
}
@article{lin386621,
title = {Effects of copper on germination, growth and sporulation of Clostridium tyrobutyricum.},
author = {Mato Rodriguez L, Alatossava T.},
journal = {Food Microbiol},
year = {2010},
doi = {10.1016/j.fm.2010.01.003},
pmid = {20227610}
}
@article{lin386817,
title = {Selection and characterization of DNA aptamers for egg white lysozyme.},
author = {Tran DT, Janssen KP, Pollet J, Lammertyn E, Anne J, Van Schepdael A, Lammertyn J.},
journal = {Molecules},
year = {2010},
doi = {10.3390/molecules15031127},
pmid = {20335968}
}
@article{lin386622,
title = {[Engineering and metabolic characteristics of a Clostridium tyrobutyricum strain].},
author = {Yang G, Liu G, Yang C.},
journal = {Sheng Wu Gong Cheng Xue Bao},
year = {2010},
pmid = {20432934}
}
@article{lin386716,
title = {Genomic sequence and characterization of the virulent bacteriophage phiCTP1 from Clostridium tyrobutyricum and heterologous expression of its endolysin.},
author = {Mayer MJ, Payne J, Gasson MJ, Narbad A.},
journal = {Appl Environ Microbiol},
year = {2010},
doi = {10.1128/aem.00989-10},
pmid = {20581196}
}
@article{lin386834,
title = {Clostridium ljungdahlii represents a microbial production platform based on syngas.},
author = {Kopke M, Held C, Hujer S, Liesegang H, Wiezer A, Wollherr A, Ehrenreich A, Liebl W, Gottschalk G, Durre P.},
journal = {Proc Natl Acad Sci U S A},
year = {2010},
doi = {10.1073/pnas.1004716107},
pmid = {20616070}
}
@article{lin386839,
title = {Assessment of heterologous butyrate and butanol pathway activity by measurement of intracellular pathway intermediates in recombinant Escherichia coli.},
author = {Fischer CR, Tseng HC, Tai M, Prather KL, Stephanopoulos G.},
journal = {Appl Microbiol Biotechnol},
year = {2010},
doi = {10.1007/s00253-010-2749-2},
pmid = {20625717}
}
@article{lin386653,
title = {Preliminary study on the isolation of Clostridium butyricum strains from natural sources in the UK and screening the isolates for presence of the type E botulinal toxin gene.},
author = {Ghoddusi HB, Sherburn R.},
journal = {Int J Food Microbiol},
year = {2010},
doi = {10.1016/j.ijfoodmicro.2010.06.028},
pmid = {20633941}
}
@article{lin386615,
title = {Nanomechanical analysis of Clostridium tyrobutyricum spores.},
author = {Andreeva N, Bassi D, Cappa F, Cocconcelli PS, Parmigiani F, Ferrini G.},
journal = {Micron},
year = {2010},
doi = {10.1016/j.micron.2010.07.006},
pmid = {20739184}
}
@article{lin386617,
title = {Enhanced butyric acid tolerance and bioproduction by Clostridium tyrobutyricum immobilized in a fibrous bed bioreactor.},
author = {Jiang L, Wang J, Liang S, Cai J, Xu Z, Cen P, Yang S, Li S.},
journal = {Biotechnol Bioeng},
year = {2011},
doi = {10.1002/bit.22927},
pmid = {20824675}
}
@article{lin386619,
title = {Efficient production of butyric acid from Jerusalem artichoke by immobilized Clostridium tyrobutyricum in a fibrous-bed bioreactor.},
author = {Huang J, Cai J, Wang J, Zhu X, Huang L, Yang ST, Xu Z.},
journal = {Bioresour Technol},
year = {2011},
doi = {10.1016/j.biortech.2010.11.112},
pmid = {21169015}
}
@article{lin107143,
title = {Structural characterization of the polar lipids of Clostridium novyi NT. Further evidence for a novel anaerobic biosynthetic pathway to plasmalogens.},
author = {Guan Z, Johnston NC, Aygun-Sunar S, Daldal F, Raetz CR, Goldfine H.},
journal = {Biochim Biophys Acta},
year = {2011},
doi = {10.1016/j.bbalip.2010.12.010},
pmid = {21195206}
}
@article{lin386848,
title = {Analysis of the unexplored features of rrs (16S rDNA) of the Genus Clostridium.},
author = {Kalia VC, Mukherjee T, Bhushan A, Joshi J, Shankar P, Huma N.},
journal = {BMC Genomics},
year = {2011},
doi = {10.1186/1471-2164-12-18},
pmid = {21223548}
}
@article{lin107137,
title = {Description of Christensenella minuta gen. nov., sp. nov., isolated from human faeces, which forms a distinct branch in the order Clostridiales, and proposal of Christensenellaceae fam. nov.},
author = {Morotomi M, Nagai F, Watanabe Y.},
journal = {Int J Syst Evol Microbiol},
year = {2012},
doi = {10.1099/ijs.0.026989-0},
pmid = {21357455}
}
@article{lin386826,
title = {Bioengineering of a Nisin A-producing Lactococcus lactis to create isogenic strains producing the natural variants Nisin F, Q and Z.},
author = {Piper C, Hill C, Cotter PD, Ross RP.},
journal = {Microb Biotechnol},
year = {2011},
doi = {10.1111/j.1751-7915.2010.00207.x},
pmid = {21375711}
}
@article{lin8268,
title = {Control and optimization of Clostridium tyrobutyricum ATCC 25755 adhesion into fibrous matrix in a fibrous bed bioreactor.},
author = {Jiang L, Wang J, Liang S, Cai J, Xu Z},
journal = {Appl Biochem Biotechnol},
year = {2011},
doi = {10.1007/s12010-011-9236-9},
pmid = {21484272}
}
@article{lin386613,
title = {Metabolic and energetic aspects of biohydrogen production of Clostridium tyrobutyricum: The effects of hydraulic retention time and peptone addition.},
author = {Whang LM, Lin CA, Liu IC, Wu CW, Cheng HH.},
journal = {Bioresour Technol},
year = {2011},
doi = {10.1016/j.biortech.2011.03.101},
pmid = {21511461}
}
@article{lin8267,
title = {Metabolic engineering of Clostridium tyrobutyricum for n-butanol production.},
author = {Yu M, Zhang Y, Tang IC, Yang ST},
journal = {Metab Eng},
year = {2011},
doi = {10.1016/j.ymben.2011.04.002},
pmid = {21530675}
}
@article{lin386599,
title = {Adaptive evolution for fast growth on glucose and the effects on the regulation of glucose transport system in Clostridium tyrobutyricum.},
author = {Jiang L, Li S, Hu Y, Xu Q, Huang H.},
journal = {Biotechnol Bioeng},
year = {2012},
doi = {10.1002/bit.23346},
pmid = {21956266}
}
@article{lin386640,
title = {Effect of temperature on microbial population and performance of an aerobic thermophilic reactor treating cattle slurry and waste food.},
author = {Mohaibes M, Vuorinen H, Heinonen-Tanski H.},
journal = {Environ Technol},
year = {2011},
doi = {10.1080/09593330.2010.533198},
pmid = {21970164}
}
@article{lin8266,
title = {Effects of ptb knockout on butyric acid fermentation by Clostridium tyrobutyricum.},
author = {Zhang Y, Yu M, Yang ST},
journal = {Biotechnol Prog},
year = {2011},
doi = {10.1002/btpr.730},
pmid = {22038864}
}
@article{lin386836,
title = {Immune response to Chlamydophila abortus POMP91B protein in the context of different Pathogen Associated Molecular Patterns (PAMP); role of antigen in the orientation of immune response.},
author = {Le Moigne V, Robreau G, Mahana W.},
journal = {Toxins (Basel)},
year = {2009},
doi = {10.3390/toxins1020059},
pmid = {22069532}
}
@article{lin8265,
title = {Effects of different replicons in conjugative plasmids on transformation efficiency, plasmid stability, gene expression and n-butanol biosynthesis in Clostridium tyrobutyricum.},
author = {Yu M, Du Y, Jiang W, Chang WL, Yang ST, Tang IC},
journal = {Appl Microbiol Biotechnol},
year = {2011},
doi = {10.1007/s00253-011-3736-y},
pmid = {22139042}
}
@article{lin386602,
title = {Specific peptides as alternative to antibody ligands for biomagnetic separation of Clostridium tyrobutyricum spores.},
author = {Lavilla M, Moros M, Puertas S, Grazu V, Perez MD, Calvo M, de la Fuente JM, Sanchez L.},
journal = {Anal Bioanal Chem},
year = {2012},
doi = {10.1007/s00216-011-5621-z},
pmid = {22160206}
}
@article{lin386609,
title = {Protective effect of Clostridium tyrobutyricum in acute dextran sodium sulphate-induced colitis: differential regulation of tumour necrosis factor-alpha and interleukin-18 in BALB/c and severe combined immunodeficiency mice.},
author = {Hudcovic T, Kolinska J, Klepetar J, Stepankova R, Rezanka T, Srutkova D, Schwarzer M, Erban V, Du Z, Wells JM, Hrncir T, Tlaskalova-Hogenova H, Kozakova H.},
journal = {Clin Exp Immunol},
year = {2012},
doi = {10.1111/j.1365-2249.2011.04498.x},
pmid = {22236013}
}
@article{lin386838,
title = {Disruption of the acetate kinase (ack) gene of Clostridium acetobutylicum results in delayed acetate production.},
author = {Kuit W, Minton NP, Lopez-Contreras AM, Eggink G.},
journal = {Appl Microbiol Biotechnol},
year = {2012},
doi = {10.1007/s00253-011-3848-4},
pmid = {22249720}
}
@article{lin386633,
title = {A two-stage bioprocess for hydrogen and methane production from rice straw bioethanol residues.},
author = {Cheng HH, Whang LM, Wu CW, Chung MC.},
journal = {Bioresour Technol},
year = {2012},
doi = {10.1016/j.biortech.2011.12.103},
pmid = {22290020}
}
@article{lin386632,
title = {Fermentative biohydrogen production from lactate and acetate.},
author = {Wu CW, Whang LM, Cheng HH, Chan KC.},
journal = {Bioresour Technol},
year = {2012},
doi = {10.1016/j.biortech.2011.12.130},
pmid = {22318084}
}
@article{lin386765,
title = {Genomic sequence of bacteriophage ATCC 8074-B1 and activity of its endolysin and engineered variants against Clostridium sporogenes.},
author = {Mayer MJ, Gasson MJ, Narbad A.},
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title = {Selection in chemostat culture of a mutant strain of Clostridium tyrobutyricum improved in its reduction of ketones.},
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journal = {Appl Microbiol Biotechnol},
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title = {Biotechnological and safety characterization of Enterococcus lactis, a recently described species of dairy origin.},
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year = {2013},
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title = {Clostridium tyrobutyricum strains show wide variation in growth at different NaCl, pH, and temperature conditions.},
author = {Ruusunen M, Surakka A, Korkeala H, Lindstrom M.},
journal = {J Food Prot},
year = {2012},
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title = {Food applications of natural antimicrobial compounds.},
author = {Lucera A, Costa C, Conte A, Del Nobile MA.},
journal = {Front Microbiol},
year = {2012},
doi = {10.3389/fmicb.2012.00287},
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@article{lin386581,
title = {Butyric acid production from sugarcane bagasse hydrolysate by Clostridium tyrobutyricum immobilized in a fibrous-bed bioreactor.},
author = {Wei D, Liu X, Yang ST.},
journal = {Bioresour Technol},
year = {2013},
doi = {10.1016/j.biortech.2012.11.065},
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title = {Potential application of aromatic plant extracts to prevent cheese blowing.},
author = {Libran CM, Moro A, Zalacain A, Molina A, Carmona M, Berruga MI.},
journal = {World J Microbiol Biotechnol},
year = {2013},
doi = {10.1007/s11274-013-1280-x},
pmid = {23417280}
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@article{lin107142,
title = {Simultaneous quantification of multiple food- and waterborne pathogens by use of microfluidic quantitative PCR.},
author = {Ishii S, Segawa T, Okabe S.},
journal = {Appl Environ Microbiol},
year = {2013},
doi = {10.1128/aem.00205-13},
pmid = {23435884}
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@article{lin8264,
title = {Co-culturing a novel Bacillus strain with Clostridium tyrobutyricum ATCC 25755 to produce butyric acid from sucrose.},
author = {Dwidar M, Kim S, Jeon BS, Um Y, Mitchell RJ, Sang BI},
journal = {Biotechnol Biofuels},
year = {2013},
doi = {10.1186/1754-6834-6-35},
pmid = {23452443}
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@article{lin386591,
title = {ANGPTL4 expression induced by butyrate and rosiglitazone in human intestinal epithelial cells utilizes independent pathways.},
author = {Korecka A, de Wouters T, Cultrone A, Lapaque N, Pettersson S, Dore J, Blottiere HM, Arulampalam V.},
journal = {Am J Physiol Gastrointest Liver Physiol},
year = {2013},
doi = {10.1152/ajpgi.00293.2012},
pmid = {23518684}
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@article{lin8263,
title = {Acetate adaptation of clostridia tyrobutyricum for improved fermentation production of butyrate.},
author = {Jaros AM, Rova U, Berglund KA},
journal = {Springerplus},
year = {2013},
doi = {10.1186/2193-1801-2-47},
pmid = {23519192}
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@article{lin8262,
title = {Diversity of Streptococcus thermophilus in bacteriocin production; inhibitory spectrum and occurrence of thermophilin genes.},
author = {Rossi F, Marzotto M, Cremonese S, Rizzotti L, Torriani S},
journal = {Food Microbiol},
year = {2013},
doi = {10.1016/j.fm.2013.02.006},
pmid = {23628611}
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@article{lin386573,
title = {Metabolic flux network analysis of fermentative hydrogen production: using Clostridium tyrobutyricum as an example.},
author = {Cheng HH, Whang LM, Lin CA, Liu IC, Wu CW.},
journal = {Bioresour Technol},
year = {2013},
doi = {10.1016/j.biortech.2013.03.141},
pmid = {23659760}
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@article{lin8261,
title = {Genome Sequence of Clostridium tyrobutyricum ATCC 25755, a Butyric Acid-Overproducing Strain.},
author = {Jiang L, Zhu L, Xu X, Li Y, Li S, Huang H},
journal = {Genome Announc},
year = {2013},
doi = {10.1128/genomeA.00308-13},
pmid = {23723404}
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@article{lin386830,
title = {Escherichia coli ATCC 8739 Adapts to the Presence of Sodium Chloride, Monosodium Glutamate, and Benzoic Acid after Extended Culture.},
author = {Lee CH, Oon JS, Lee KC, Ling MH.},
journal = {ISRN Microbiol},
year = {2012},
doi = {10.5402/2012/965356},
pmid = {23724334}
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@article{lin386611,
title = {Immunological response in egg-sensitive adults challenged with cheese containing or not containing lysozyme.},
author = {Rossi F, Iaconelli A, Fiorentini L, Zito F, Donati MB, De Cristofaro ML, Piva G, Mingrone G.},
journal = {J Am Coll Nutr},
year = {2012},
doi = {10.1080/07315724.2012.10720463},
pmid = {23756581}
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@article{lin386577,
title = {Enhanced butanol production by coculture of Clostridium beijerinckii and Clostridium tyrobutyricum.},
author = {Li L, Ai H, Zhang S, Li S, Liang Z, Wu ZQ, Yang ST, Wang JF.},
journal = {Bioresour Technol},
year = {2013},
doi = {10.1016/j.biortech.2013.06.023},
pmid = {23819976}
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@article{lin8260,
title = {Draft Genome Sequence of Clostridium tyrobutyricum Strain UC7086, Isolated from Grana Padano Cheese with Late-Blowing Defect.},
author = {Bassi D, Fontana C, Gazzola S, Pietta E, Puglisi E, Cappa F, Cocconcelli PS},
journal = {Genome Announc},
year = {2013},
doi = {10.1128/genomeA.00614-13},
pmid = {23950123}
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@article{lin386574,
title = {Demonstration of in situ product recovery of butyric acid via CO2 -facilitated pH swings and medium development in two-phase partitioning bioreactors.},
author = {Peterson EC, Daugulis AJ.},
journal = {Biotechnol Bioeng},
year = {2014},
doi = {10.1002/bit.25106},
pmid = {23996152}
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@article{lin386594,
title = {Metabolic engineering of Clostridium acetobutylicum for enhanced production of butyric acid.},
author = {Jang YS, Woo HM, Im JA, Kim IH, Lee SY.},
journal = {Appl Microbiol Biotechnol},
year = {2013},
doi = {10.1007/s00253-013-5161-x},
pmid = {24013291}
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title = {Bacteriocins - exploring alternatives to antibiotics in mastitis treatment.},
author = {Pieterse R, Todorov SD.},
journal = {Braz J Microbiol},
year = {2010},
doi = {10.1590/s1517-83822010000300003},
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@article{lin386565,
title = {Detection of Clostridium tyrobutyricum in milk to prevent late blowing in cheese by automated ribosomal intergenic spacer analysis.},
author = {Panelli S, Brambati E, Bonacina C, Feligini M.},
journal = {J Food Sci},
year = {2013},
doi = {10.1111/1750-3841.12229},
pmid = {24106762}
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@article{lin386772,
title = {Growth Limiting pH, Water Activity, and Temperature for Neurotoxigenic Strains of Clostridium butyricum.},
author = {Ghoddusi HB, Sherburn RE, Aboaba OO.},
journal = {ISRN Microbiol},
year = {2013},
doi = {10.1155/2013/731430},
pmid = {24195005}
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@article{lin8259,
title = {Radiation induces acid tolerance of Clostridium tyrobutyricum and enhances bioproduction of butyric acid through a metabolic switch.},
author = {Zhou X, Lu XH, Li XH, Xin ZJ, Xie JR, Zhao MR, Wang L, Du WY, Liang JP},
journal = {Biotechnol Biofuels},
year = {2014},
doi = {10.1186/1754-6834-7-22},
pmid = {24533663}
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@article{lin386558,
title = {Comparison of the effects of high energy carbon heavy ion irradiation and Eucommia ulmoides Oliv. on biosynthesis butyric acid efficiency in Clostridium tyrobutyricum.},
author = {Zhou X, Wang SY, Lu XH, Liang JP.},
journal = {Bioresour Technol},
year = {2014},
doi = {10.1016/j.biortech.2014.03.039},
pmid = {24704888}
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@article{lin8258,
title = {The use of high pressure CO2 -facilitated pH swings to enhance in situ product recovery of butyric acid in a two-phase partitioning bioreactor.},
author = {Peterson EC, Daugulis AJ},
journal = {Biotechnol Bioeng},
year = {2014},
doi = {10.1002/bit.25285},
pmid = {24888558}
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@article{lin8257,
title = {Prevention of late blowing defect by reuterin produced in cheese by a Lactobacillus reuteri adjunct.},
author = {Gomez-Torres N, Avila M, Gaya P, Garde S},
journal = {Food Microbiol},
year = {2014},
doi = {10.1016/j.fm.2014.02.018},
pmid = {24929721}
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@article{lin386605,
title = {Management practices and forage quality affecting the contamination of milk with anaerobic spore-forming bacteria.},
author = {Zucali M, Bava L, Colombini S, Brasca M, Decimo M, Morandi S, Tamburini A, Crovetto GM.},
journal = {J Sci Food Agric},
year = {2015},
doi = {10.1002/jsfa.6822},
pmid = {25042169}
}
@article{lin386596,
title = {Incidence, diversity and characteristics of spores of psychrotolerant spore formers in various REPFEDS produced in Belgium.},
author = {Samapundo S, Devlieghere F, Xhaferi R, Heyndrickx M.},
journal = {Food Microbiol},
year = {2014},
doi = {10.1016/j.fm.2014.06.020},
pmid = {25084675}
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@article{lin386730,
title = {The gut microbiota and developmental programming of the testis in mice.},
author = {Al-Asmakh M, Stukenborg JB, Reda A, Anuar F, Strand ML, Hedin L, Pettersson S, Soder O.},
journal = {PLoS One},
year = {2014},
doi = {10.1371/journal.pone.0103809},
pmid = {25118984}
}
@article{lin386600,
title = {Enumeration of clostridia in goat milk using an optimized membrane filtration technique.},
author = {Reindl A, Dzieciol M, Hein I, Wagner M, Zangerl P.},
journal = {J Dairy Sci},
year = {2014},
doi = {10.3168/jds.2014-8218},
pmid = {25129496}
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@article{lin386606,
title = {Clostridium algifaecis sp. nov., an anaerobic bacterial species from decomposing algal scum.},
author = {Wu YF, Zheng H, Wu QL, Yang H, Liu SJ.},
journal = {Int J Syst Evol Microbiol},
year = {2014},
doi = {10.1099/ijs.0.064345-0},
pmid = {25168611}
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@article{lin107120,
title = {Metabolic engineering of microorganisms for the production of higher alcohols.},
author = {Choi YJ, Lee J, Jang YS, Lee SY.},
journal = {mBio},
year = {2014},
doi = {10.1128/mbio.01524-14},
pmid = {25182323}
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@article{lin8256,
title = {Multilocus variable-number of tandem repeat analysis (MLVA) for Clostridium tyrobutyricum strains isolated from cheese production environment.},
author = {Nishihara M, Takahashi H, Sudo T, Kyoi D, Kawahara T, Ikeuchi Y, Fujita T, Kuda T, Kimura B, Yanahira S},
journal = {Int J Food Microbiol},
year = {2014},
doi = {10.1016/j.ijfoodmicro.2014.08.022},
pmid = {25190602}
}
@article{lin386614,
title = {Effects of dairy slurry on silage fermentation characteristics and nutritive value of alfalfa.},
author = {Coblentz WK, Muck RE, Borchardt MA, Spencer SK, Jokela WE, Bertram MG, Coffey KP.},
journal = {J Dairy Sci},
year = {2014},
doi = {10.3168/jds.2014-8582},
pmid = {25242431}
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@article{lin386712,
title = {A mutation of Aspergillus niger for hyper-production of citric acid from corn meal hydrolysate in a bioreactor.},
author = {Hu W, Liu J, Chen JH, Wang SY, Lu D, Wu QH, Li WJ.},
journal = {J Zhejiang Univ Sci B},
year = {2014},
doi = {10.1631/jzus.b1400132},
pmid = {25367793}
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@article{lin107085,
title = {The gut microbiota influences blood-brain barrier permeability in mice.},
author = {Braniste V, Al-Asmakh M, Kowal C, Anuar F, Abbaspour A, Toth M, Korecka A, Bakocevic N, Ng LG, Kundu P, Gulyas B, Halldin C, Hultenby K, Nilsson H, Hebert H, Volpe BT, Diamond B, Pettersson S.},
journal = {Sci Transl Med},
year = {2014},
doi = {10.1126/scitranslmed.3009759},
pmid = {25411471}
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@article{lin386551,
title = {Comparative proteomics analysis of high n-butanol producing metabolically engineered Clostridium tyrobutyricum.},
author = {Ma C, Kojima K, Xu N, Mobley J, Zhou L, Yang ST, Liu XM.},
journal = {J Biotechnol},
year = {2015},
doi = {10.1016/j.jbiotec.2014.10.036},
pmid = {25449011}
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@article{lin386812,
title = {Intraperitoneal administration of butyrate prevents the severity of acetic acid colitis in rats.},
author = {Malago JJ, Sangu CL.},
journal = {J Zhejiang Univ Sci B},
year = {2015},
doi = {10.1631/jzus.b1400191},
pmid = {25743124}
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@article{lin386567,
title = {Draft Genome Sequences of Clostridium tyrobutyricum Strains FAM22552 and FAM22553, Isolated from Swiss Semihard Red-Smear Cheese.},
author = {Storari M, Wuthrich D, Bruggmann R, Berthoud H, Arias-Roth E.},
journal = {Genome Announc},
year = {2015},
doi = {10.1128/genomea.00078-15},
pmid = {25767226}
}
@article{lin386822,
title = {Adaptation and transcriptome analysis of Aureobasidium pullulans in corncob hydrolysate for increased inhibitor tolerance to malic acid production.},
author = {Zou X, Wang Y, Tu G, Zan Z, Wu X.},
journal = {PLoS One},
year = {2015},
doi = {10.1371/journal.pone.0121416},
pmid = {25793624}
}
@article{lin386559,
title = {Draft Genome Sequence of Clostridium tyrobutyricum Strain DIVETGP, Isolated from Cow's Milk for Grana Padano Production.},
author = {Soggiu A, Piras C, Gaiarsa S, Bendixen E, Panitz F, Bendixen C, Sassera D, Brasca M, Bonizzi L, Roncada P.},
journal = {Genome Announc},
year = {2015},
doi = {10.1128/genomea.00213-15},
pmid = {25814611}
}
@article{lin386544,
title = {Metabolic engineering of Clostridium tyrobutyricum for n-butanol production: effects of CoA transferase.},
author = {Yu L, Zhao J, Xu M, Dong J, Varghese S, Yu M, Tang IC, Yang ST.},
journal = {Appl Microbiol Biotechnol},
year = {2015},
doi = {10.1007/s00253-015-6566-5},
pmid = {25851718}
}
@article{lin386590,
title = {Electrochemical detoxification of phenolic compounds in lignocellulosic hydrolysate for Clostridium fermentation.},
author = {Lee KM, Min K, Choi O, Kim KY, Woo HM, Kim Y, Han SO, Um Y.},
journal = {Bioresour Technol},
year = {2015},
doi = {10.1016/j.biortech.2015.03.129},
pmid = {25863199}
}
@article{lin386543,
title = {Development of a triplex real-time PCR assay for the simultaneous detection of Clostridium beijerinckii, Clostridium sporogenes and Clostridium tyrobutyricum in milk.},
author = {Morandi S, Cremonesi P, Silvetti T, Castiglioni B, Brasca M.},
journal = {Anaerobe},
year = {2015},
doi = {10.1016/j.anaerobe.2015.04.005},
pmid = {25870135}
}
@article{lin386538,
title = {Metabolic engineering of Clostridium tyrobutyricum for n-butanol production through co-utilization of glucose and xylose.},
author = {Yu L, Xu M, Tang IC, Yang ST.},
journal = {Biotechnol Bioeng},
year = {2015},
doi = {10.1002/bit.25613},
pmid = {25894463}
}
@article{lin386540,
title = {Metabolic engineering of Clostridium tyrobutyricum for n-butanol production from maltose and soluble starch by overexpressing alpha-glucosidase.},
author = {Yu L, Xu M, Tang IC, Yang ST.},
journal = {Appl Microbiol Biotechnol},
year = {2015},
doi = {10.1007/s00253-015-6680-4},
pmid = {26002632}
}
@article{lin386545,
title = {Mechanisms of Clostridium tyrobutyricum removal through natural creaming of milk: A microscopy study.},
author = {D'Incecco P, Faoro F, Silvetti T, Schrader K, Pellegrino L.},
journal = {J Dairy Sci},
year = {2015},
doi = {10.3168/jds.2015-9526},
pmid = {26051312}
}
@article{lin107124,
title = {Spread of tetracycline resistance genes at a conventional dairy farm.},
author = {Kyselkova M, Jirout J, Vrchotova N, Schmitt H, Elhottova D.},
journal = {Front Microbiol},
year = {2015},
doi = {10.3389/fmicb.2015.00536},
pmid = {26074912}
}
@article{lin107117,
title = {Developing a mesophilic co-culture for direct conversion of cellulose to butanol in consolidated bioprocess.},
author = {Wang Z, Cao G, Zheng J, Fu D, Song J, Zhang J, Zhao L, Yang Q.},
journal = {Biotechnol Biofuels},
year = {2015},
doi = {10.1186/s13068-015-0266-3},
pmid = {26089984}
}
@article{lin107112,
title = {Butyric acid fermentation from pretreated and hydrolysed wheat straw by an adapted Clostridium tyrobutyricum strain.},
author = {Baroi GN, Baumann I, Westermann P, Gavala HN.},
journal = {Microb Biotechnol},
year = {2015},
doi = {10.1111/1751-7915.12304},
pmid = {26230610}
}
@article{lin107113,
title = {Tequila vinasses acidogenesis in a UASB reactor with Clostridium predominance.},
author = {Marino-Marmolejo EN, Corbala-Robles L, Cortez-Aguilar RC, Contreras-Ramos SM, Bolanos-Rosales RE, Davila-Vazquez G.},
journal = {Springerplus},
year = {2015},
doi = {10.1186/s40064-015-1193-2},
pmid = {26301166}
}
@article{lin386580,
title = {Engineered strains of Streptococcus macedonicus towards an osmotic stress resistant phenotype retain their ability to produce the bacteriocin macedocin under hyperosmotic conditions.},
author = {Anastasiou R, Driessche GV, Boutou E, Kazou M, Alexandraki V, Vorgias CE, Devreese B, Tsakalidou E, Papadimitriou K.},
journal = {J Biotechnol},
year = {2015},
doi = {10.1016/j.jbiotec.2015.08.018},
pmid = {26319319}
}
@article{lin386824,
title = {Characterization of hemicellulase and cellulase from the extremely thermophilic bacterium Caldicellulosiruptor owensensis and their potential application for bioconversion of lignocellulosic biomass without pretreatment.},
author = {Peng X, Qiao W, Mi S, Jia X, Su H, Han Y.},
journal = {Biotechnol Biofuels},
year = {2015},
doi = {10.1186/s13068-015-0313-0},
pmid = {26322125}
}
@article{lin386578,
title = {Understanding the bacterial communities of hard cheese with blowing defect.},
author = {Bassi D, Puglisi E, Cocconcelli PS.},
journal = {Food Microbiol},
year = {2015},
doi = {10.1016/j.fm.2015.07.004},
pmid = {26338123}
}
@article{lin386823,
title = {Flagellin glycosylation in Paenibacillus alvei CCM 2051T.},
author = {Janesch B, Schirmeister F, Maresch D, Altmann F, Messner P, Kolarich D, Schaffer C.},
journal = {Glycobiology},
year = {2016},
doi = {10.1093/glycob/cwv087},
pmid = {26405108}
}
@article{lin107122,
title = {Enhancing Butanol Production under the Stress Environments of Co-Culturing Clostridium acetobutylicum/Saccharomyces cerevisiae Integrated with Exogenous Butyrate Addition.},
author = {Luo H, Ge L, Zhang J, Zhao Y, Ding J, Li Z, He Z, Chen R, Shi Z.},
journal = {PLoS One},
year = {2015},
doi = {10.1371/journal.pone.0141160},
pmid = {26489085}
}
@article{lin386630,
title = {Effect of in situ acids removal on mixed glucose and xylose fermentation by Clostridium tyrobutyricum.},
author = {Baroi GN, Skiadas IV, Westermann P, Gavala HN.},
journal = {AMB Express},
year = {2015},
doi = {10.1186/s13568-015-0153-0},
pmid = {26516087}
}
@article{lin386758,
title = {Crystal Structure of the CTP1L Endolysin Reveals How Its Activity Is Regulated by a Secondary Translation Product.},
author = {Dunne M, Leicht S, Krichel B, Mertens HD, Thompson A, Krijgsveld J, Svergun DI, Gomez-Torres N, Garde S, Uetrecht C, Narbad A, Mayer MJ, Meijers R.},
journal = {J Biol Chem},
year = {2016},
doi = {10.1074/jbc.m115.671172},
pmid = {26683375}
}
@article{lin386571,
title = {Pretreatment of Corn Stover by Low Moisture Anhydrous Ammonia (LMAA) in a Pilot-Scale Reactor and Bioconversion to Fuel Ethanol and Industrial Chemicals.},
author = {Nghiem NP, Senske GE, Kim TH.},
journal = {Appl Biochem Biotechnol},
year = {2016},
doi = {10.1007/s12010-016-1982-2},
pmid = {26769706}
}
@article{lin386809,
title = {Improving isopropanol tolerance and production of Clostridium beijerinckii DSM 6423 by random mutagenesis and genome shuffling.},
author = {Gerando HM, Fayolle-Guichard F, Rudant L, Millah SK, Monot F, Lopes Ferreira N, Lopez-Contreras AM.},
journal = {Appl Microbiol Biotechnol},
year = {2016},
doi = {10.1007/s00253-016-7302-5},
pmid = {26852409}
}
@article{lin386661,
title = {Continuous Fermentation of Wheat Straw Hydrolysate by Clostridium tyrobutyricum with In-Situ Acids Removal.},
author = {Baroi GN, Skiadas IV, Westermann P, Gavala HN.},
journal = {Waste Biomass Valorization},
year = {2015},
doi = {10.1007/s12649-015-9348-5},
pmid = {26855685}
}
@article{lin386548,
title = {Seasonal occurrence and molecular diversity of clostridia species spores along cheesemaking streams of 5 commercial dairy plants.},
author = {Bermudez J, Gonzalez MJ, Olivera JA, Burgueno JA, Juliano P, Fox EM, Reginensi SM.},
journal = {J Dairy Sci},
year = {2016},
doi = {10.3168/jds.2015-10079},
pmid = {26923043}
}
@article{lin107100,
title = {Draft Genome Sequence of the Butyric Acid Producer Clostridium tyrobutyricum Strain CIP I-776 (IFP923).},
author = {Wasels F, Clement B, Lopes Ferreira N.},
journal = {Genome Announc},
year = {2016},
doi = {10.1128/genomea.00048-16},
pmid = {26941139}
}
@article{lin386566,
title = {Lysozyme affects the microbial catabolism of free arginine in raw-milk hard cheeses.},
author = {D'Incecco P, Gatti M, Hogenboom JA, Bottari B, Rosi V, Neviani E, Pellegrino L.},
journal = {Food Microbiol},
year = {2016},
doi = {10.1016/j.fm.2015.11.020},
pmid = {27052697}
}
@article{lin386568,
title = {Enhanced isopropanol and n-butanol production by supplying exogenous acetic acid via co-culturing two clostridium strains from cassava bagasse hydrolysate.},
author = {Zhang S, Qu C, Huang X, Suo Y, Liao Z, Wang J.},
journal = {J Ind Microbiol Biotechnol},
year = {2016},
doi = {10.1007/s10295-016-1775-1},
pmid = {27116556}
}
@article{lin386526,
title = {Carbon material distribution and flux analysis under varying glucose concentrations in hydrogen-producing Clostridium tyrobutyricum JM1.},
author = {Jo JH, Kim W.},
journal = {J Biotechnol},
year = {2016},
doi = {10.1016/j.jbiotec.2016.04.051},
pmid = {27140868}
}
@article{lin386557,
title = {Effects of different heat treatments on lysozyme quantity and antimicrobial activity of jenny milk.},
author = {Cosentino C, Labella C, Elshafie HS, Camele I, Musto M, Paolino R, D'Adamo C, Freschi P.},
journal = {J Dairy Sci},
year = {2016},
doi = {10.3168/jds.2015-10702},
pmid = {27157571}
}
@article{lin386785,
title = {Complete genome sequence of Leuconostoc gelidum subsp. gasicomitatum KG16-1, isolated from vacuum-packaged vegetable sausages.},
author = {Andreevskaya M, Hultman J, Johansson P, Laine P, Paulin L, Auvinen P, Bjorkroth J.},
journal = {Stand Genomic Sci},
year = {2016},
doi = {10.1186/s40793-016-0164-8},
pmid = {27274361}
}
@article{lin8255,
title = {Deciphering Clostridium tyrobutyricum Metabolism Based on the Whole-Genome Sequence and Proteome Analyses.},
author = {Lee J, Jang YS, Han MJ, Kim JY, Lee SY},
journal = {mBio},
year = {2016},
doi = {10.1128/mBio.00743-16},
pmid = {27302759}
}
@article{lin386786,
title = {Characterization of the spore surface and exosporium proteins of Clostridium sporogenes; implications for Clostridium botulinum group I strains.},
author = {Janganan TK, Mullin N, Tzokov SB, Stringer S, Fagan RP, Hobbs JK, Moir A, Bullough PA.},
journal = {Food Microbiol},
year = {2016},
doi = {10.1016/j.fm.2016.06.003},
pmid = {27375261}
}
@article{lin386535,
title = {Genomic approach to studying nutritional requirements of Clostridium tyrobutyricum and other Clostridia causing late blowing defects.},
author = {Storari M, Kulli S, Wuthrich D, Bruggmann R, Berthoud H, Arias-Roth E.},
journal = {Food Microbiol},
year = {2016},
doi = {10.1016/j.fm.2016.05.013},
pmid = {27375262}
}
@article{lin107111,
title = {The acquisition of Clostridium tyrobutyricum mutants with improved bioproduction under acidic conditions after two rounds of heavy-ion beam irradiation.},
author = {Zhou X, Yang Z, Jiang TT, Wang SY, Liang JP, Lu XH, Wang L.},
journal = {Sci Rep},
year = {2016},
doi = {10.1038/srep29968},
pmid = {27426447}
}
@article{lin386828,
title = {Engineered Production of Short Chain Fatty Acid in Escherichia coli Using Fatty Acid Synthesis Pathway.},
author = {Jawed K, Mattam AJ, Fatma Z, Wajid S, Abdin MZ, Yazdani SS.},
journal = {PLoS One},
year = {2016},
doi = {10.1371/journal.pone.0160035},
pmid = {27466817}
}
@article{lin107132,
title = {Wukongibacter baidiensis gen. nov., sp. nov., an anaerobic bacterium isolated from hydrothermal sulfides, and proposal for the reclassification of the closely related Clostridium halophilum and Clostridium caminithermale within Maledivibacter gen. nov. and Paramaledivibacter gen. nov., respectively.},
author = {Li G, Zeng X, Liu X, Zhang X, Shao Z.},
journal = {Int J Syst Evol Microbiol},
year = {2016},
doi = {10.1099/ijsem.0.001355},
pmid = {27473553}
}
@article{lin386528,
title = {Application of high pressure processing for controlling Clostridium tyrobutyricum and late blowing defect on semi-hard cheese.},
author = {Avila M, Gomez-Torres N, Delgado D, Gaya P, Garde S.},
journal = {Food Microbiol},
year = {2016},
doi = {10.1016/j.fm.2016.07.008},
pmid = {27554159}
}
@article{lin386825,
title = {The Core and Seasonal Microbiota of Raw Bovine Milk in Tanker Trucks and the Impact of Transfer to a Milk Processing Facility.},
author = {Kable ME, Srisengfa Y, Laird M, Zaragoza J, McLeod J, Heidenreich J, Marco ML.},
journal = {mBio},
year = {2016},
doi = {10.1128/mbio.00836-16},
pmid = {27555305}
}
@article{lin386677,
title = {Extracts containing CLPs of Bacillus amyloliquefaciens JN68 isolated from chicken intestines exert antimicrobial effects, particularly on methicillin-resistant Staphylococcus aureus and Listeria monocytogenes.},
author = {Chen JN, Wei CW, Liu HC, Chen SY, Chen C, Juang YM, Lai CC, Yiang GT.},
journal = {Mol Med Rep},
year = {2016},
doi = {10.3892/mmr.2016.5900},
pmid = {27840979}
}
@article{lin386780,
title = {Host-microbiome interactions: the aryl hydrocarbon receptor and the central nervous system.},
author = {Lee HU, McPherson ZE, Tan B, Korecka A, Pettersson S.},
journal = {J Mol Med (Berl)},
year = {2017},
doi = {10.1007/s00109-016-1486-0},
pmid = {27858116}
}
@article{lin386527,
title = {Metabolic engineering of Clostridium tyrobutyricum for enhanced butyric acid production from glucose and xylose.},
author = {Fu H, Yu L, Lin M, Wang J, Xiu Z, Yang ST.},
journal = {Metab Eng},
year = {2017},
doi = {10.1016/j.ymben.2016.12.014},
pmid = {28040464}
}
@article{lin386517,
title = {Metabolic engineering of Clostridium tyrobutyricum for n-butanol production from sugarcane juice.},
author = {Zhang J, Yu L, Xu M, Yang ST, Yan Q, Lin M, Tang IC.},
journal = {Appl Microbiol Biotechnol},
year = {2017},
doi = {10.1007/s00253-017-8200-1},
pmid = {28238080}
}
@article{lin386514,
title = {n-Butanol production from sucrose and sugarcane juice by engineered Clostridium tyrobutyricum overexpressing sucrose catabolism genes and adhE2.},
author = {Zhang J, Yu L, Lin M, Yan Q, Yang ST.},
journal = {Bioresour Technol},
year = {2017},
doi = {10.1016/j.biortech.2017.02.079},
pmid = {28258996}
}
@article{lin8254,
title = {In situ esterification and extractive fermentation for butyl butyrate production with Clostridium tyrobutyricum.},
author = {Zhang ZT, Taylor S, Wang Y},
journal = {Biotechnol Bioeng},
year = {2017},
doi = {10.1002/bit.26289},
pmid = {28295202}
}
@article{lin386550,
title = {High-efficient n-butanol production by co-culturing Clostridium acetobutylicum and Saccharomyces cerevisiae integrated with butyrate fermentative supernatant addition.},
author = {Luo H, Zeng Q, Han S, Wang Z, Dong Q, Bi Y, Zhao Y.},
journal = {World J Microbiol Biotechnol},
year = {2017},
doi = {10.1007/s11274-017-2246-1},
pmid = {28337710}
}
@article{lin386515,
title = {Butyric acid production from lignocellulosic biomass hydrolysates by engineered Clostridium tyrobutyricum overexpressing xylose catabolism genes for glucose and xylose co-utilization.},
author = {Fu H, Yang ST, Wang M, Wang J, Tang IC.},
journal = {Bioresour Technol},
year = {2017},
doi = {10.1016/j.biortech.2017.03.073},
pmid = {28343058}
}
@article{lin386815,
title = {n-Butanol derived from biochemical and chemical routes: A review.},
author = {Ndaba B, Chiyanzu I, Marx S.},
journal = {Biotechnol Rep (Amst)},
year = {2015},
doi = {10.1016/j.btre.2015.08.001},
pmid = {28352567}
}
@article{lin386553,
title = {Dynamics of microbial community during ensiling direct-cut alfalfa with and without LAB inoculant and sugar.},
author = {Zheng ML, Niu DZ, Jiang D, Zuo SS, Xu CC.},
journal = {J Appl Microbiol},
year = {2017},
doi = {10.1111/jam.13456},
pmid = {28370869}
}
@article{lin386728,
title = {Microbial Immuno-Communication in Neurodegenerative Diseases.},
author = {Main BS, Minter MR.},
journal = {Front Neurosci},
year = {2017},
doi = {10.3389/fnins.2017.00151},
pmid = {28386215}
}
@article{lin8253,
title = {Enhanced butyric acid tolerance and production by Class I heat shock protein-overproducing Clostridium tyrobutyricum ATCC 25755.},
author = {Suo Y, Luo S, Zhang Y, Liao Z, Wang J},
journal = {J Ind Microbiol Biotechnol},
year = {2017},
doi = {10.1007/s10295-017-1939-7},
pmid = {28439766}
}
@article{lin386748,
title = {A Multibacteriocin Cheese Starter System, Comprising Nisin and Lacticin 3147 in Lactococcus lactis, in Combination with Plantaricin from Lactobacillus plantarum.},
author = {Mills S, Griffin C, O'Connor PM, Serrano LM, Meijer WC, Hill C, Ross RP.},
journal = {Appl Environ Microbiol},
year = {2017},
doi = {10.1128/aem.00799-17},
pmid = {28476774}
}
@article{lin386520,
title = {Insights from the complete genome sequence of Clostridium tyrobutyricum provide a platform for biotechnological and industrial applications.},
author = {Wu Q, Liu T, Zhu L, Huang H, Jiang L.},
journal = {J Ind Microbiol Biotechnol},
year = {2017},
doi = {10.1007/s10295-017-1956-6},
pmid = {28536840}
}
@article{lin107123,
title = {Bacteriocin-Producing Enterococcus faecium LCW 44: A High Potential Probiotic Candidate from Raw Camel Milk.},
author = {Vimont A, Fernandez B, Hammami R, Ababsa A, Daba H, Fliss I.},
journal = {Front Microbiol},
year = {2017},
doi = {10.3389/fmicb.2017.00865},
pmid = {28572793}
}
@article{lin386513,
title = {Industrial-scale application of Lactobacillus reuteri coupled with glycerol as a biopreservation system for inhibiting Clostridium tyrobutyricum in semi-hard ewe milk cheese.},
author = {Avila M, Gomez-Torres N, Delgado D, Gaya P, Garde S.},
journal = {Food Microbiol},
year = {2017},
doi = {10.1016/j.fm.2017.04.010},
pmid = {28576357}
}
@article{lin386784,
title = {Alkene hydrogenation activity of enoate reductases for an environmentally benign biosynthesis of adipic acid.},
author = {Joo JC, Khusnutdinova AN, Flick R, Kim T, Bornscheuer UT, Yakunin AF, Mahadevan R.},
journal = {Chem Sci},
year = {2017},
doi = {10.1039/c6sc02842j},
pmid = {28616142}
}
@article{lin107118,
title = {Indoleacrylic Acid Produced by Commensal Peptostreptococcus Species Suppresses Inflammation.},
author = {Wlodarska M, Luo C, Kolde R, d'Hennezel E, Annand JW, Heim CE, Krastel P, Schmitt EK, Omar AS, Creasey EA, Garner AL, Mohammadi S, O'Connell DJ, Abubucker S, Arthur TD, Franzosa EA, Huttenhower C, Murphy LO, Haiser HJ, Vlamakis H, Porter JA, Xavier RJ.},
journal = {Cell Host Microbe},
year = {2017},
doi = {10.1016/j.chom.2017.06.007},
pmid = {28704649}
}
@article{lin386743,
title = {Production, Characterization, and Antimicrobial Activity of Mycocin Produced by Debaryomyces hansenii DSMZ70238.},
author = {Al-Qaysi SAS, Al-Haideri H, Thabit ZA, Al-Kubaisy WHAA, Ibrahim JAA.},
journal = {Int J Microbiol},
year = {2017},
doi = {10.1155/2017/2605382},
pmid = {28757872}
}
@article{lin8252,
title = {Fermentative hydrogen production from Jerusalem artichoke by Clostridium tyrobutyricum expressing exo-inulinase gene.},
author = {Jiang L, Wu Q, Xu Q, Zhu L, Huang H},
journal = {Sci Rep},
year = {2017},
doi = {10.1038/s41598-017-07207-7},
pmid = {28801602}
}
@article{lin386762,
title = {Anodic electro-fermentation of 3-hydroxypropionic acid from glycerol by recombinant Klebsiella pneumoniae L17 in a bioelectrochemical system.},
author = {Kim C, Kim MY, Michie I, Jeon BH, Premier GC, Park S, Kim JR.},
journal = {Biotechnol Biofuels},
year = {2017},
doi = {10.1186/s13068-017-0886-x},
pmid = {28824709}
}
@article{lin386541,
title = {Exploring the microbial origins of p-cresol and its co-occurrence pattern in the Chinese liquor-making process.},
author = {Du H, Liu B, Wang X, Xu Y.},
journal = {Int J Food Microbiol},
year = {2017},
doi = {10.1016/j.ijfoodmicro.2017.08.016},
pmid = {28843121}
}
@article{lin386552,
title = {Effect of high-pressure treatments on proteolysis, volatile compounds, texture, colour, and sensory characteristics of semi-hard raw ewe milk cheese.},
author = {Avila M, Gomez-Torres N, Delgado D, Gaya P, Garde S.},
journal = {Food Res Int},
year = {2017},
doi = {10.1016/j.foodres.2017.07.043},
pmid = {28873726}
}
@article{lin386803,
title = {Cas9 Nickase-Assisted RNA Repression Enables Stable and Efficient Manipulation of Essential Metabolic Genes in Clostridium cellulolyticum.},
author = {Xu T, Li Y, He Z, Van Nostrand JD, Zhou J.},
journal = {Front Microbiol},
year = {2017},
doi = {10.3389/fmicb.2017.01744},
pmid = {28936208}
}
@article{lin107105,
title = {Rebalancing Redox to Improve Biobutanol Production by Clostridium tyrobutyricum.},
author = {Ma C, Ou J, Xu N, Fierst JL, Yang ST, Liu X, Liu X.},
journal = {Bioengineering (Basel)},
year = {2015},
doi = {10.3390/bioengineering3010002},
pmid = {28952564}
}
@article{lin8251,
title = {Clostridium pabulibutyricum sp. nov., a butyric-acid-producing organism isolated from high-moisture grass silage.},
author = {Kobayashi H, Nakasato T, Sakamoto M, Ohtani Y, Terada F, Sakai K, Ohkuma M, Tohno M},
journal = {Int J Syst Evol Microbiol},
year = {2017},
doi = {10.1099/ijsem.0.002387},
pmid = {29034861}
}
@article{lin386732,
title = {Nanopore Long-Read Guided Complete Genome Assembly of Hydrogenophaga intermedia, and Genomic Insights into 4-Aminobenzenesulfonate, p-Aminobenzoic Acid and Hydrogen Metabolism in the Genus Hydrogenophaga.},
author = {Gan HM, Lee YP, Austin CM.},
journal = {Front Microbiol},
year = {2017},
doi = {10.3389/fmicb.2017.01880},
pmid = {29046667}
}
@article{lin386813,
title = {Recombinant expression and characterisation of the oxygen-sensitive 2-enoate reductase from Clostridium sporogenes.},
author = {Mordaka PM, Hall SJ, Minton N, Stephens G.},
journal = {Microbiology (Reading)},
year = {2018},
doi = {10.1099/mic.0.000568},
pmid = {29111967}
}
@article{lin386655,
title = {Development of a specific fluorescent phage endolysin for in situ detection of Clostridium species associated with cheese spoilage.},
author = {Gomez-Torres N, Dunne M, Garde S, Meijers R, Narbad A, Avila M, Mayer MJ.},
journal = {Microb Biotechnol},
year = {2018},
doi = {10.1111/1751-7915.12883},
pmid = {29160025}
}
@article{lin8250,
title = {Butyric acid production from lignocellulosic biomass hydrolysates by engineered Clostridium tyrobutyricum overexpressing Class I heat shock protein GroESL.},
author = {Suo Y, Fu H, Ren M, Yang X, Liao Z, Wang J},
journal = {Bioresour Technol},
year = {2017},
doi = {10.1016/j.biortech.2017.11.059},
pmid = {29220814}
}
@article{lin386731,
title = {Microbiome, Immunomodulation, and the Neuronal System.},
author = {Marietta E, Horwath I, Taneja V.},
journal = {Neurotherapeutics},
year = {2018},
doi = {10.1007/s13311-017-0601-4},
pmid = {29313275}
}
@article{lin386723,
title = {Bacterial community in naturally fermented milk products of Arunachal Pradesh and Sikkim of India analysed by high-throughput amplicon sequencing.},
author = {Shangpliang HNJ, Rai R, Keisam S, Jeyaram K, Tamang JP.},
journal = {Sci Rep},
year = {2018},
doi = {10.1038/s41598-018-19524-6},
pmid = {29367606}
}
@article{lin386509,
title = {Effect of temperature on the microstructure of fat globules and the immunoglobulin-mediated interactions between fat and bacteria in natural raw milk creaming.},
author = {D'Incecco P, Ong L, Pellegrino L, Faoro F, Barbiroli A, Gras S.},
journal = {J Dairy Sci},
year = {2018},
doi = {10.3168/jds.2017-13580},
pmid = {29398025}
}
@article{lin386512,
title = {Acetone-Butanol-Ethanol Production from Waste Seaweed Collected from Gwangalli Beach, Busan, Korea, Based on pH-Controlled and Sequential Fermentation Using Two Strains.},
author = {Sunwoo IY, Hau NT, Ra CH, Jeong GT, Kim SK.},
journal = {Appl Biochem Biotechnol},
year = {2018},
doi = {10.1007/s12010-018-2711-9},
pmid = {29423868}
}
@article{lin386501,
title = {Effect of hot season on blood parameters, fecal fermentative parameters, and occurrence of Clostridium tyrobutyricum spores in feces of lactating dairy cows.},
author = {Calamari L, Morera P, Bani P, Minuti A, Basirico L, Vitali A, Bernabucci U.},
journal = {J Dairy Sci},
year = {2018},
doi = {10.3168/jds.2017-13693},
pmid = {29501337}
}
@article{lin386503,
title = {Exploiting endogenous CRISPR-Cas system for multiplex genome editing in Clostridium tyrobutyricum and engineer the strain for high-level butanol production.},
author = {Zhang J, Zong W, Hong W, Zhang ZT, Wang Y.},
journal = {Metab Eng},
year = {2018},
doi = {10.1016/j.ymben.2018.03.007},
pmid = {29530750}
}
@article{lin386494,
title = {Biosynthesis of butyric acid by Clostridium tyrobutyricum.},
author = {Huang J, Tang W, Zhu S, Du M.},
journal = {Prep Biochem Biotechnol},
year = {2018},
doi = {10.1080/10826068.2018.1452257},
pmid = {29561227}
}
@article{lin8249,
title = {Metabolic engineering of Clostridium tyrobutyricum for enhanced butyric acid production with high butyrate/acetate ratio.},
author = {Suo Y, Ren M, Yang X, Liao Z, Fu H, Wang J},
journal = {Appl Microbiol Biotechnol},
year = {2018},
doi = {10.1007/s00253-018-8954-0},
pmid = {29627851}
}
@article{lin386496,
title = {Clostridium Tyrobutyricum Protect Intestinal Barrier Function from LPS-Induced Apoptosis via P38/JNK Signaling Pathway in IPEC-J2 Cells.},
author = {Xiao Z, Liu L, Tao W, Pei X, Wang G, Wang M.},
journal = {Cell Physiol Biochem},
year = {2018},
doi = {10.1159/000489364},
pmid = {29705796}
}
@article{lin107106,
title = {Enhanced extraction of butyric acid under high-pressure CO2 conditions to integrate chemical catalysis for value-added chemicals and biofuels.},
author = {Chun J, Choi O, Sang BI.},
journal = {Biotechnol Biofuels},
year = {2018},
doi = {10.1186/s13068-018-1120-1},
pmid = {29713378}
}
@article{lin386820,
title = {Unravelling the Reduction Pathway as an Alternative Metabolic Route to Hydroxycinnamate Decarboxylation in Lactobacillus plantarum.},
author = {Santamaria L, Reveron I, Lopez de Felipe F, de Las Rivas B, Munoz R.},
journal = {Appl Environ Microbiol},
year = {2018},
doi = {10.1128/aem.01123-18},
pmid = {29776925}
}
@article{lin8248,
title = {Bioaugmentation with Clostridium tyrobutyricum to improve butyric acid production through direct rice straw bioconversion.},
author = {Chi X, Li J, Wang X, Zhang Y, Leu SY, Wang Y},
journal = {Bioresour Technol},
year = {2018},
doi = {10.1016/j.biortech.2018.04.120},
pmid = {29778795}
}
@article{lin386806,
title = {Synthesis, antimicrobial activity and conformational analysis of the class IIa bacteriocin pediocin PA-1 and analogs thereof.},
author = {Bedard F, Hammami R, Zirah S, Rebuffat S, Fliss I, Biron E.},
journal = {Sci Rep},
year = {2018},
doi = {10.1038/s41598-018-27225-3},
pmid = {29899567}
}
@article{lin386604,
title = {Production of butyric acid from acid hydrolysate of corn husk in fermentation by Clostridium tyrobutyricum: kinetics and process economic analysis.},
author = {Xiao Z, Cheng C, Bao T, Liu L, Wang B, Tao W, Pei X, Yang ST, Wang M.},
journal = {Biotechnol Biofuels},
year = {2018},
doi = {10.1186/s13068-018-1165-1},
pmid = {29946355}
}
@article{lin386620,
title = {Genomic Characterization of Sulphite Reducing Bacteria Isolated From the Dairy Production Chain.},
author = {Doyle CJ, O'Toole PW, Cotter PD.},
journal = {Front Microbiol},
year = {2018},
doi = {10.3389/fmicb.2018.01507},
pmid = {30026740}
}
@article{lin386715,
title = {Cheeses Made from Raw and Pasteurized Cow's Milk Analysed by an Electronic Nose and an Electronic Tongue.},
author = {Valente NIP, Rudnitskaya A, Oliveira JABP, Gomes MTSR, Gaspar EMM.},
journal = {Sensors (Basel)},
year = {2018},
doi = {10.3390/s18082415},
pmid = {30044422}
}
@article{lin386718,
title = {Identification of Clostridium spp. derived from a sheep and cattle slaughterhouse by matrix-assisted laser desorption and ionization-time of flight mass spectrometry (MALDI-TOF MS) and 16S rDNA sequencing.},
author = {Bakhtiary F, Sayevand HR, Remely M, Hippe B, Indra A, Hosseini H, Haslberger AG.},
journal = {J Food Sci Technol},
year = {2018},
doi = {10.1007/s13197-018-3255-2},
pmid = {30065434}
}
@article{lin8247,
title = {Metabolic engineering of Clostridium tyrobutyricum for enhanced butyric acid production from undetoxified corncob acid hydrolysate.},
author = {Suo Y, Liao Z, Qu C, Fu H, Wang J},
journal = {Bioresour Technol},
year = {2018},
doi = {10.1016/j.biortech.2018.09.095},
pmid = {30278351}
}
@article{lin386506,
title = {Pretreatment with gamma-Valerolactone/[Mmim]DMP and Enzymatic Hydrolysis on Corncob and Its Application in Immobilized Butyric Acid Fermentation.},
author = {Zheng W, Liu X, Zhu L, Huang H, Wang T, Jiang L.},
journal = {J Agric Food Chem},
year = {2018},
doi = {10.1021/acs.jafc.8b04323},
pmid = {30296065}
}
@article{lin107116,
title = {Impact of DNA Sequencing and Analysis Methods on 16S rRNA Gene Bacterial Community Analysis of Dairy Products.},
author = {Xue Z, Kable ME, Marco ML.},
journal = {mSphere},
year = {2018},
doi = {10.1128/msphere.00410-18},
pmid = {30333179}
}
@article{lin8246,
title = {Enhanced butyric acid production using mixed biomass of brown algae and rice straw by Clostridium tyrobutyricum ATCC25755.},
author = {Oh HJ, Kim KY, Lee KM, Lee SM, Gong G, Oh MK, Um Y},
journal = {Bioresour Technol},
year = {2018},
doi = {10.1016/j.biortech.2018.11.037},
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title = {One year investigation of the prevalence and diversity of clostridial spores in raw milk from the Tokachi area of Hokkaido.},
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journal = {Anim Sci J},
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title = {Use of fluorescent CTP1L endolysin cell wall-binding domain to study the evolution of Clostridium tyrobutyricum during cheese ripening.},
author = {Gomez-Torres N, Avila M, Narbad A, Mayer MJ, Garde S.},
journal = {Food Microbiol},
year = {2019},
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title = {LysPBC2, a Novel Endolysin Harboring a Bacillus cereus Spore Binding Domain.},
author = {Kong M, Na H, Ha NC, Ryu S.},
journal = {Appl Environ Microbiol},
year = {2019},
doi = {10.1128/aem.02462-18},
pmid = {30552194}
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@article{lin386693,
title = {Acetate promotes microbial reductive debromination of tetrabromobisphenol A during the startup phase of anaerobic wastewater sludge bioreactors.},
author = {Lefevre E, Redfern L, Cooper EM, Stapleton HM, Gunsch CK.},
journal = {Sci Total Environ},
year = {2019},
doi = {10.1016/j.scitotenv.2018.11.403},
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@article{lin386522,
title = {Human gut microbes are susceptible to antimicrobial food additives in vitro.},
author = {Hrncirova L, Hudcovic T, Sukova E, Machova V, Trckova E, Krejsek J, Hrncir T.},
journal = {Folia Microbiol (Praha)},
year = {2019},
doi = {10.1007/s12223-018-00674-z},
pmid = {30656592}
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title = {Improved n-Butanol Production from Clostridium cellulovorans by Integrated Metabolic and Evolutionary Engineering.},
author = {Wen Z, Ledesma-Amaro R, Lin J, Jiang Y, Yang S.},
journal = {Appl Environ Microbiol},
year = {2019},
doi = {10.1128/aem.02560-18},
pmid = {30658972}
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@article{lin386775,
title = {Anaerobic Process for Bioenergy Recovery From Dairy Waste: Meta-Analysis and Enumeration of Microbial Community Related to Intermediates Production.},
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journal = {Front Microbiol},
year = {2018},
doi = {10.3389/fmicb.2018.03229},
pmid = {30687248}
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@article{lin386487,
title = {Butanol and butyric acid production from Saccharina japonica by Clostridium acetobutylicum and Clostridium tyrobutyricum with adaptive evolution.},
author = {Ra CH, Sunwoo IY, Nguyen TH, Sukwong P, Sirisuk P, Jeong GT, Kim SK.},
journal = {Bioprocess Biosyst Eng},
year = {2019},
doi = {10.1007/s00449-018-02063-9},
pmid = {30788572}
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@article{lin386771,
title = {Probiotic Properties of Enterococcus Isolated From Artisanal Dairy Products.},
author = {Nami Y, Vaseghi Bakhshayesh R, Mohammadzadeh Jalaly H, Lotfi H, Lotfi H, Eslami S, Hejazi MA.},
journal = {Front Microbiol},
year = {2019},
doi = {10.3389/fmicb.2019.00300},
pmid = {30863379}
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@article{lin107140,
title = {Intestinal Bacteria as Powerful Trapping Lifeforms for the Elimination of Radioactive Cesium.},
author = {Saito K, Kuroda K, Suzuki R, Kino Y, Sekine T, Shinoda H, Yamashiro H, Fukuda T, Kobayashi J, Abe Y, Nishimura J, Urushihara Y, Yoneyama H, Fukumoto M, Isogai E.},
journal = {Front Vet Sci},
year = {2019},
doi = {10.3389/fvets.2019.00070},
pmid = {30915344}
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@article{lin386717,
title = {Gouda cheese spoilage prevention: Biodegradable coating induced by Bunium persicum essential oil and lactoperoxidase system.},
author = {Saravani M, Ehsani A, Aliakbarlu J, Ghasempour Z.},
journal = {Food Sci Nutr},
year = {2019},
doi = {10.1002/fsn3.888},
pmid = {30918638}
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@article{lin386798,
title = {Influence of Lysozyme on Selected Bacteria Associated with Gouda Cheese.},
author = {Bester BH, Lombard SH.},
journal = {J Food Prot},
year = {1990},
doi = {10.4315/0362-028x-53.4.306},
pmid = {31018376}
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@article{lin386767,
title = {Efficacy and safety assessment of two enterococci phages in an in vitro biofilm wound model.},
author = {Melo LDR, Ferreira R, Costa AR, Oliveira H, Azeredo J.},
journal = {Sci Rep},
year = {2019},
doi = {10.1038/s41598-019-43115-8},
pmid = {31040333}
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@article{lin386480,
title = {Correction to: Butanol and butyric acid production from Saccharina japonica by Clostridium acetobutylicum and Clostridium tyrobutyricum with adaptive evolution.},
author = {Ra CH, Sunwoo IY, Nguyen TH, Sukwong P, Sirisuk P, Jeong GT, Kim SK.},
journal = {Bioprocess Biosyst Eng},
year = {2019},
doi = {10.1007/s00449-019-02145-2},
pmid = {31111211}
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@article{lin386483,
title = {Abatement of the clostridial load in the teats of lactating cows with lysozyme derived from donkey milk.},
author = {Adduci F, Elshafie HS, Labella C, Musto M, Freschi P, Paolino R, Ragni M, Cosentino C.},
journal = {J Dairy Sci},
year = {2019},
doi = {10.3168/jds.2019-16311},
pmid = {31155256}
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@article{lin8277,
title = {Long-Chain Polyphosphates Inhibit Growth of Clostridium tyrobutyricum in Processed Cheese Spreads.},
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journal = {J Food Prot},
year = {1997},
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@article{lin386835,
title = {Micronutrient Requirements and Sharing Capabilities of the Human Gut Microbiome.},
author = {Rodionov DA, Arzamasov AA, Khoroshkin MS, Iablokov SN, Leyn SA, Peterson SN, Novichkov PS, Osterman AL.},
journal = {Front Microbiol},
year = {2019},
doi = {10.3389/fmicb.2019.01316},
pmid = {31275260}
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@article{lin386491,
title = {Dairy farm management practices and the risk of contamination of tank milk from Clostridium spp. and Paenibacillus spp. spores in silage, total mixed ration, dairy cow feces, and raw milk.},
author = {Borreani G, Ferrero F, Nucera D, Casale M, Piano S, Tabacco E.},
journal = {J Dairy Sci},
year = {2019},
doi = {10.3168/jds.2019-16462},
pmid = {31326179}
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@article{lin386747,
title = {Optimization of alkaline protease production by rational deletion of sporulation related genes in Bacillus licheniformis.},
author = {Zhou C, Zhou H, Zhang H, Lu F.},
journal = {Microb Cell Fact},
year = {2019},
doi = {10.1186/s12934-019-1174-1},
pmid = {31345221}
}
@article{lin107097,
title = {Whole-Genome Sequencing and Annotation of Clostridium tyrobutyricum Strain Cirm BIA 2237, Isolated from Silage.},
author = {Munier E, Licandro-Seraut H, Achilleos C, Cachon R, Beuvier E.},
journal = {Microbiol Resour Announc},
year = {2019},
doi = {10.1128/mra.00492-19},
pmid = {31346011}
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@article{lin386841,
title = {The Use of Copper as an Antimicrobial Agent in Health Care, Including Obstetrics and Gynecology.},
author = {Arendsen LP, Thakar R, Sultan AH.},
journal = {Clin Microbiol Rev},
year = {2019},
doi = {10.1128/cmr.00125-18},
pmid = {31413046}
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@article{lin386478,
title = {Production of n-butanol from cassava bagasse hydrolysate by engineered Clostridium tyrobutyricum overexpressing adhE2: Kinetics and cost analysis.},
author = {Huang J, Du Y, Bao T, Lin M, Wang J, Yang ST.},
journal = {Bioresour Technol},
year = {2019},
doi = {10.1016/j.biortech.2019.121969},
pmid = {31415989}
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@article{lin386852,
title = {Ocins for Food Safety.},
author = {Choyam S, Srivastava AK, Shin JH, Kammara R.},
journal = {Front Microbiol},
year = {2019},
doi = {10.3389/fmicb.2019.01736},
pmid = {31428063}
}
@article{lin386746,
title = {Altered Gut Microbiome in Parkinson's Disease and the Influence of Lipopolysaccharide in a Human alpha-Synuclein Over-Expressing Mouse Model.},
author = {Gorecki AM, Preskey L, Bakeberg MC, Kenna JE, Gildenhuys C, MacDougall G, Dunlop SA, Mastaglia FL, Akkari PA, Koengten F, Anderton RS.},
journal = {Front Neurosci},
year = {2019},
doi = {10.3389/fnins.2019.00839},
pmid = {31440136}
}
@article{lin386479,
title = {Development of an in vivo fluorescence based gene expression reporter system for Clostridium tyrobutyricum.},
author = {Cheng C, Lin M, Jiang W, Zhao J, Li W, Yang ST.},
journal = {J Biotechnol},
year = {2019},
doi = {10.1016/j.jbiotec.2019.08.019},
pmid = {31472166}
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@article{lin386690,
title = {Insight into the Lytic Functions of the Lactococcal Prophage TP712.},
author = {Escobedo S, Campelo AB, Wegmann U, Garcia P, Rodriguez A, Martinez B.},
journal = {Viruses},
year = {2019},
doi = {10.3390/v11100881},
pmid = {31546996}
}
@article{lin386654,
title = {Food Preservatives Induce Proteobacteria Dysbiosis in Human-Microbiota Associated Nod2-Deficient Mice.},
author = {Hrncirova L, Machova V, Trckova E, Krejsek J, Hrncir T.},
journal = {Microorganisms},
year = {2019},
doi = {10.3390/microorganisms7100383},
pmid = {31548508}
}
@article{lin386482,
title = {Clostridium tyrobutyricum alleviates Staphylococcus aureus-induced endometritis in mice by inhibiting endometrial barrier disruption and inflammatory response.},
author = {Hu X, Guo J, Xu M, Jiang P, Yuan X, Zhao C, Maimai T, Cao Y, Zhang N, Fu Y.},
journal = {Food Funct},
year = {2019},
doi = {10.1039/c9fo00654k},
pmid = {31559977}
}
@article{lin386819,
title = {The role of the brain-gut-microbiota axis in psychology: The importance of considering gut microbiota in the development, perpetuation, and treatment of psychological disorders.},
author = {Ganci M, Suleyman E, Butt H, Ball M.},
journal = {Brain Behav},
year = {2019},
doi = {10.1002/brb3.1408},
pmid = {31568686}
}
@article{lin386787,
title = {Advances in the development and application of microbial consortia for metabolic engineering.},
author = {Jawed K, Yazdani SS, Koffas MA.},
journal = {Metab Eng Commun},
year = {2019},
doi = {10.1016/j.mec.2019.e00095},
pmid = {31720211}
}
@article{lin386719,
title = {LPS Inhibits Fatty Acid Absorption in Enterocytes through TNF-alpha Secreted by Macrophages.},
author = {Liu H, Kai L, Du H, Wang X, Wang Y.},
journal = {Cells},
year = {2019},
doi = {10.3390/cells8121626},
pmid = {31842409}
}
@article{lin386475,
title = {Evaluation of methods for DNA extraction from Clostridium tyrobutyricum spores and its detection by qPCR.},
author = {Esteban M, Marcos P, Horna C, Galan-Malo P, Mata L, Perez MD, Calvo M, Sanchez L.},
journal = {J Microbiol Methods},
year = {2020},
doi = {10.1016/j.mimet.2019.105818},
pmid = {31881287}
}
@article{lin386584,
title = {Volatile Transference and Antimicrobial Activity of Cheeses Made with Ewes' Milk Fortified with Essential Oils.},
author = {Licon CC, Moro A, Libran CM, Molina AM, Zalacain A, Berruga MI, Carmona M.},
journal = {Foods},
year = {2020},
doi = {10.3390/foods9010035},
pmid = {31906406}
}
@article{lin8245,
title = {Direct conversion of untreated cane molasses into butyric acid by engineered Clostridium tyrobutyricum.},
author = {Guo X, Fu H, Feng J, Hu J, Wang J},
journal = {Bioresour Technol},
year = {2020},
doi = {10.1016/j.biortech.2020.122764},
pmid = {31958691}
}
@article{lin386742,
title = {Oxygen radical based on non-thermal atmospheric pressure plasma alleviates lignin-derived phenolic toxicity in yeast.},
author = {Ito S, Sakai K, Gamaleev V, Ito M, Hori M, Kato M, Shimizu M.},
journal = {Biotechnol Biofuels},
year = {2020},
doi = {10.1186/s13068-020-1655-9},
pmid = {32010221}
}
@article{lin8244,
title = {Butyric acid production from spent coffee grounds by engineered Clostridium tyrobutyricum overexpressing galactose catabolism genes.},
author = {He F, Qin S, Yang Z, Bai X, Suo Y, Wang J},
journal = {Bioresour Technol},
year = {2020},
doi = {10.1016/j.biortech.2020.122977},
pmid = {32062499}
}
@article{lin386687,
title = {Structural and functional insights into a novel two-component endolysin encoded by a single gene in Enterococcus faecalis phage.},
author = {Zhou B, Zhen X, Zhou H, Zhao F, Fan C, Perculija V, Tong Y, Mi Z, Ouyang S.},
journal = {PLoS Pathog},
year = {2020},
doi = {10.1371/journal.ppat.1008394},
pmid = {32176738}
}
@article{lin386645,
title = {Molecular identification of a Bacillus cereus strain from Murrah buffalo milk showed in vitro bioremediation properties on selective heavy metals.},
author = {Azad SA, Farjana M, Mazumder B, Abdullah-Al-Mamun M, Haque ABMI.},
journal = {J Adv Vet Anim Res},
year = {2020},
doi = {10.5455/javar.2020.g394},
pmid = {32219111}
}
@article{lin386668,
title = {The gut microbiota contributes to the development of Staphylococcus aureus-induced mastitis in mice.},
author = {Hu X, Guo J, Zhao C, Jiang P, Maimai T, Yanyi L, Cao Y, Fu Y, Zhang N.},
journal = {ISME J},
year = {2020},
doi = {10.1038/s41396-020-0651-1},
pmid = {32341472}
}
@article{lin386749,
title = {Monobutyrin and Monovalerin Affect Brain Short-Chain Fatty Acid Profiles and Tight-Junction Protein Expression in ApoE-Knockout Rats Fed High-Fat Diets.},
author = {Nguyen TD, Hallenius FF, Lin X, Nyman M, Prykhodko O.},
journal = {Nutrients},
year = {2020},
doi = {10.3390/nu12041202},
pmid = {32344633}
}
@article{lin386782,
title = {Challenges and Advances in Genome Editing Technologies in Streptomyces.},
author = {Zhao Y, Li G, Chen Y, Lu Y.},
journal = {Biomolecules},
year = {2020},
doi = {10.3390/biom10050734},
pmid = {32397082}
}
@article{lin107102,
title = {RRNPP-type quorum-sensing systems regulate solvent formation, sporulation and cell motility in Clostridium saccharoperbutylacetonicum.},
author = {Feng J, Zong W, Wang P, Zhang ZT, Gu Y, Dougherty M, Borovok I, Wang Y.},
journal = {Biotechnol Biofuels},
year = {2020},
doi = {10.1186/s13068-020-01723-x},
pmid = {32411297}
}
@article{lin386476,
title = {Production of isopropyl and butyl esters by Clostridium mono-culture and co-culture.},
author = {Cui Y, He J, Yang KL, Zhou K.},
journal = {J Ind Microbiol Biotechnol},
year = {2020},
doi = {10.1007/s10295-020-02279-3},
pmid = {32418085}
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@article{lin8243,
title = {Enhancing plasmid transformation efficiency and enabling CRISPR-Cas9/Cpf1-based genome editing in Clostridium tyrobutyricum.},
author = {Zhang J, Hong W, Guo L, Wang Y, Wang Y},
journal = {Biotechnol Bioeng},
year = {2020},
doi = {10.1002/bit.27435},
pmid = {32437010}
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@article{lin386679,
title = {Production and Sensing of Butyrate in a Probiotic Escherichia coli Strain.},
author = {Bai Y, Mansell TJ.},
journal = {Int J Mol Sci},
year = {2020},
doi = {10.3390/ijms21103615},
pmid = {32443851}
}
@article{lin8242,
title = {Fe3O4@chitosan Microspheres Coating as Cytoprotective Exoskeletons for the Enhanced Production of Butyric Acid With Clostridium tyrobutyricum Under Acid Stress.},
author = {Liu T, Jiang C, Zhu L, Jiang L, Huang H},
journal = {Front Bioeng Biotechnol},
year = {2020},
doi = {10.3389/fbioe.2020.00449},
pmid = {32500066}
}
@article{lin386473,
title = {Effect of Lactococcus lactis expressing phage endolysin on the late blowing defect of cheese caused by Clostridium tyrobutyricum.},
author = {Garde S, Calzada J, Sanchez C, Gaya P, Narbad A, Meijers R, Mayer MJ, Avila M.},
journal = {Int J Food Microbiol},
year = {2020},
doi = {10.1016/j.ijfoodmicro.2020.108686},
pmid = {32516659}
}
@article{lin107080,
title = {Characterization of Clostridium tyrobutyricum Strains Using Three Different Typing Techniques.},
author = {Burtscher J, Kuller F, Dreier M, Arias-Roth E, Drissner D, Domig KJ.},
journal = {Microorganisms},
year = {2020},
doi = {10.3390/microorganisms8071057},
pmid = {32708607}
}
@article{lin386810,
title = {Reduction of Nitrite in Meat Products through the Application of Various Plant-Based Ingredients.},
author = {Ferysiuk K, Wojciak KM.},
journal = {Antioxidants (Basel)},
year = {2020},
doi = {10.3390/antiox9080711},
pmid = {32764511}
}
@article{lin386463,
title = {Recent advances in n-butanol and butyrate production using engineered Clostridium tyrobutyricum.},
author = {Bao T, Feng J, Jiang W, Fu H, Wang J, Yang ST.},
journal = {World J Microbiol Biotechnol},
year = {2020},
doi = {10.1007/s11274-020-02914-2},
pmid = {32794091}
}
@article{lin386769,
title = {Biohydrogen production beyond the Thauer limit by precision design of artificial microbial consortia.},
author = {Ergal I, Graf O, Hasibar B, Steiner M, Vukotic S, Bochmann G, Fuchs W, Rittmann SKR.},
journal = {Commun Biol},
year = {2020},
doi = {10.1038/s42003-020-01159-x},
pmid = {32796915}
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@article{lin386714,
title = {Melatonin Alleviates Neuroinflammation and Metabolic Disorder in DSS-Induced Depression Rats.},
author = {Lv WJ, Liu C, Yu LZ, Zhou JH, Li Y, Xiong Y, Guo A, Chao LM, Qu Q, Wei GW, Tang XG, Yin YL, Guo SN.},
journal = {Oxid Med Cell Longev},
year = {2020},
doi = {10.1155/2020/1241894},
pmid = {32802257}
}
@article{lin386477,
title = {A heterogeneous microbial consortium producing short-chain fatty acids from lignocellulose.},
author = {Shahab RL, Brethauer S, Davey MP, Smith AG, Vignolini S, Luterbacher JS, Studer MH.},
journal = {Science},
year = {2020},
doi = {10.1126/science.abb1214},
pmid = {32855308}
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@article{lin386713,
title = {Reporter Phage-Based Detection of Bacterial Pathogens: Design Guidelines and Recent Developments.},
author = {Meile S, Kilcher S, Loessner MJ, Dunne M.},
journal = {Viruses},
year = {2020},
doi = {10.3390/v12090944},
pmid = {32858938}
}
@article{lin386725,
title = {Metabolic modeling of bacterial co-culture systems predicts enhanced carbon monoxide-to-butyrate conversion compared to monoculture systems.},
author = {Li X, Henson MA.},
journal = {Biochem Eng J},
year = {2019},
doi = {10.1016/j.bej.2019.107338},
pmid = {32863734}
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@article{lin386711,
title = {Bacterial Populations in International Artisanal Kefirs.},
author = {Sindi A, Badsha MB, Unlu G.},
journal = {Microorganisms},
year = {2020},
doi = {10.3390/microorganisms8091318},
pmid = {32872546}
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@article{lin386464,
title = {Genome Sequence Analysis of Clostridium tyrobutyricum, a Promising Microbial Host for Human Health and Industrial Applications.},
author = {Liu T, Zhu L, Zhu Z, Jiang L.},
journal = {Curr Microbiol},
year = {2020},
doi = {10.1007/s00284-020-02175-0},
pmid = {32888044}
}
@article{lin386459,
title = {The effect of Clostridium tyrobutyricum Spo0A overexpression in the intestine of mice.},
author = {Liang Q, Liu J, Wei J, Jia J, Shen H, Chen W, Liang W, Gao B, Xu Z, Zhang L.},
journal = {Benef Microbes},
year = {2020},
doi = {10.3920/bm2019.0131},
pmid = {33032473}
}
@article{lin386791,
title = {Bacteriocins From LAB and Other Alternative Approaches for the Control of Clostridium and Clostridiodes Related Gastrointestinal Colitis.},
author = {Todorov SD, Kang HJ, Ivanova IV, Holzapfel WH.},
journal = {Front Bioeng Biotechnol},
year = {2020},
doi = {10.3389/fbioe.2020.581778},
pmid = {33042979}
}
@article{lin386680,
title = {Effects of processing, moisture, and storage length on the fermentation profile, particle size, and ruminal disappearance of reconstituted corn grain.},
author = {Gomes ALM, Bueno AVI, Jacovaci FA, Donadel G, Ferraretto LF, Nussio LG, Jobim CC, Daniel JLP.},
journal = {J Anim Sci},
year = {2020},
doi = {10.1093/jas/skaa332},
pmid = {33045037}
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@article{lin386461,
title = {Effects of benzyl viologen on increasing NADH availability, acetate assimilation, and butyric acid production by Clostridium tyrobutyricum.},
author = {Fu H, Lin M, Tang IC, Wang J, Yang ST.},
journal = {Biotechnol Bioeng},
year = {2021},
doi = {10.1002/bit.27602},
pmid = {33058166}
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@article{lin386542,
title = {Microbial community dynamics during alfalfa silage with or without clostridial fermentation.},
author = {Li R, Jiang D, Zheng M, Tian P, Zheng M, Xu C.},
journal = {Sci Rep},
year = {2020},
doi = {10.1038/s41598-020-74958-1},
pmid = {33082504}
}
@article{lin386562,
title = {New Antibacterial Peptides from the Freshwater Mollusk Pomacea poeyana (Pilsbry, 1927).},
author = {Gonzalez Garcia M, Rodriguez A, Alba A, Vazquez AA, Morales Vicente FE, Perez-Erviti J, Spellerberg B, Stenger S, Grieshober M, Conzelmann C, Munch J, Raber H, Kubiczek D, Rosenau F, Wiese S, Standker L, Otero-Gonzalez A.},
journal = {Biomolecules},
year = {2020},
doi = {10.3390/biom10111473},
pmid = {33113998}
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@article{lin386696,
title = {beta-Lytic Protease of Lysobacter capsici VKM B-2533T.},
author = {Afoshin AS, Konstantinov MA, Toropygin IY, Kudryakova IV, Vasilyeva NV.},
journal = {Antibiotics (Basel)},
year = {2020},
doi = {10.3390/antibiotics9110744},
pmid = {33126447}
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@article{lin8241,
title = {Butyric Acid Generation by Clostridium tyrobutyricum from Low-Moisture Anhydrous Ammonia (LMAA) Pretreated Sweet Sorghum Bagasse.},
author = {Stoklosa RJ, Moore C, Latona RJ, Nghiem NP},
journal = {Appl Biochem Biotechnol},
year = {2020},
doi = {10.1007/s12010-020-03449-w},
pmid = {33188509}
}
@article{lin386709,
title = {Viral macrodomains: a structural and evolutionary assessment of the pharmacological potential.},
author = {Rack JGM, Zorzini V, Zhu Z, Schuller M, Ahel D, Ahel I.},
journal = {Open Biol},
year = {2020},
doi = {10.1098/rsob.200237},
pmid = {33202171}
}
@article{lin107079,
title = {Strain-Dependent Cheese Spoilage Potential of Clostridium tyrobutyricum.},
author = {Podrzaj L, Burtscher J, Kuller F, Domig KJ.},
journal = {Microorganisms},
year = {2020},
doi = {10.3390/microorganisms8111836},
pmid = {33266400}
}
@article{lin386691,
title = {Phage lysin that specifically eliminates Clostridium botulinum Group I cells.},
author = {Zhang Z, Lahti M, Douillard FP, Korkeala H, Lindstrom M.},
journal = {Sci Rep},
year = {2020},
doi = {10.1038/s41598-020-78622-6},
pmid = {33299101}
}
@article{lin386705,
title = {Inhibition of p38 MAPK Mitigates Lung Ischemia Reperfusion Injury by Reducing Blood-Air Barrier Hyperpermeability.},
author = {Wang T, Liu C, Pan LH, Liu Z, Li CL, Lin JY, He Y, Xiao JY, Wu S, Qin Y, Li Z, Lin F.},
journal = {Front Pharmacol},
year = {2020},
doi = {10.3389/fphar.2020.569251},
pmid = {33362540}
}
@article{lin386462,
title = {Comparative transcriptome analysis of Clostridium tyrobutyricum expressing a heterologous uptake hydrogenase.},
author = {Li W, Cheng C, Cao G, Yang ST, Ren N.},
journal = {Sci Total Environ},
year = {2020},
doi = {10.1016/j.scitotenv.2020.142022},
pmid = {33370888}
}
@article{lin386601,
title = {New possibilities for egg white lysozyme: heat-denatured lysozyme partially inactivates select foot-and-mouth disease virus strains.},
author = {Fukai K, Inoue K, Takeuchi A, Yamakawa M.},
journal = {Sci Rep},
year = {2021},
doi = {10.1038/s41598-020-80239-8},
pmid = {33436858}
}
@article{lin386529,
title = {
Clostridium tyrobutyricum Protects against LPS-Induced Colonic Inflammation via IL-22 Signaling in Mice.},
author = {Xiao Z, Liu L, Jin Y, Pei X, Sun W, Wang M.},
journal = {Nutrients},
year = {2021},
doi = {10.3390/nu13010215},
pmid = {33451114}
}
@article{lin386800,
title = {Dynamics and Complexity of Dark Fermentation Microbial Communities Producing Hydrogen From Sugar Beet Molasses in Continuously Operating Packed Bed Reactors.},
author = {Detman A, Laubitz D, Chojnacka A, Wiktorowska-Sowa E, Piotrowski J, Salamon A, Kazmierczak W, Blaszczyk MK, Barberan A, Chen Y, Lupikasza E, Yang F, Sikora A.},
journal = {Front Microbiol},
year = {2020},
doi = {10.3389/fmicb.2020.612344},
pmid = {33488554}
}
@article{lin386595,
title = {Development of a High-Throughput Microfluidic qPCR System for the Quantitative Determination of Quality-Relevant Bacteria in Cheese.},
author = {Dreier M, Berthoud H, Shani N, Wechsler D, Junier P.},
journal = {Front Microbiol},
year = {2020},
doi = {10.3389/fmicb.2020.619166},
pmid = {33488561}
}
@article{lin386799,
title = {Volatile Fatty Acids as Carbon Sources for Polyhydroxyalkanoates Production.},
author = {Szacherska K, Oleskowicz-Popiel P, Ciesielski S, Mozejko-Ciesielska J.},
journal = {Polymers (Basel)},
year = {2021},
doi = {10.3390/polym13030321},
pmid = {33498279}
}
@article{lin386797,
title = {Microbiota Assessments for the Identification and Confirmation of Slit Defect-Causing Bacteria in Milk and Cheddar Cheese.},
author = {Xue Z, Brooks JT, Quart Z, Stevens ET, Kable ME, Heidenreich J, McLeod J, Marco ML.},
journal = {mSystems},
year = {2021},
doi = {10.1128/msystems.01114-20},
pmid = {33563789}
}
@article{lin386741,
title = {Proteomic Adaptation of Clostridioides difficile to Treatment with the Antimicrobial Peptide Nisin.},
author = {Maass S, Bartel J, Mucke PA, Schluter R, Sura T, Zaschke-Kriesche J, Smits SHJ, Becher D.},
journal = {Cells},
year = {2021},
doi = {10.3390/cells10020372},
pmid = {33670309}
}
@article{lin386474,
title = {Integrating chemical and biological catalysis for simultaneous production of polyphenolics and butyric acid from waste pomegranate peels.},
author = {Wang T, Zhao Q, Li C, He F, Jiang L, Aisa HA.},
journal = {Sci Total Environ},
year = {2021},
doi = {10.1016/j.scitotenv.2021.146095},
pmid = {33711591}
}
@article{lin386796,
title = {The Distinctive Evolution of orfX Clostridium parabotulinum Strains and Their Botulinum Neurotoxin Type A and F Gene Clusters Is Influenced by Environmental Factors and Gene Interactions via Mobile Genetic Elements.},
author = {Smith TJ, Williamson CHD, Hill KK, Johnson SL, Xie G, Anniballi F, Auricchio B, Fernandez RA, Caballero PA, Keim P, Sahl JW.},
journal = {Front Microbiol},
year = {2021},
doi = {10.3389/fmicb.2021.566908},
pmid = {33716993}
}
@article{lin386734,
title = {Hydrogen as a Co-electron Donor for Chain Elongation With Complex Communities.},
author = {Baleeiro FCF, Kleinsteuber S, Strauber H.},
journal = {Front Bioeng Biotechnol},
year = {2021},
doi = {10.3389/fbioe.2021.650631},
pmid = {33898406}
}
@article{lin107099,
title = {Impact of Nisin and Nisin-Producing Lactococcus lactis ssp. lactis on Clostridium tyrobutyricum and Bacterial Ecosystem of Cheese Matrices.},
author = {Hassan H, St-Gelais D, Gomaa A, Fliss I.},
journal = {Foods},
year = {2021},
doi = {10.3390/foods10040898},
pmid = {33921812}
}
@article{lin386763,
title = {Production of the biocommodities butanol and acetone from methanol with fluorescent FAST-tagged proteins using metabolically engineered strains of Eubacterium limosum.},
author = {Flaiz M, Ludwig G, Bengelsdorf FR, Durre P.},
journal = {Biotechnol Biofuels},
year = {2021},
doi = {10.1186/s13068-021-01966-2},
pmid = {33971948}
}
@article{lin386641,
title = {Exploring the relationship between gut microbiota and exercise: short-chain fatty acids and their role in metabolism.},
author = {Carey RA, Montag D.},
journal = {BMJ Open Sport Exerc Med},
year = {2021},
doi = {10.1136/bmjsem-2020-000930},
pmid = {33981447}
}
@article{lin8240,
title = {A Potential Prophylactic Probiotic for Inflammatory Bowel Disease: The Overall Investigation of Clostridium tyrobutyricum ATCC25755 Attenuates LPS-Induced Inflammation via Regulating Intestinal Immune Cells.},
author = {Xiao Z, Liu L, Jin Y, Pei X, Sun W, Wang M},
journal = {Mol Nutr Food Res},
year = {2021},
doi = {10.1002/mnfr.202001213},
pmid = {34021704}
}
@article{lin386454,
title = {Butanol production from Saccharina japonica hydrolysate by engineered Clostridium tyrobutyricum: The effects of pretreatment method and heat shock protein overexpression.},
author = {Fu H, Hu J, Guo X, Feng J, Yang ST, Wang J.},
journal = {Bioresour Technol},
year = {2021},
doi = {10.1016/j.biortech.2021.125290},
pmid = {34023662}
}
@article{lin386700,
title = {Probiotic and Functional Properties of Limosilactobacillus reuteri INIA P572.},
author = {Diez-Echave P, Martin-Cabrejas I, Garrido-Mesa J, Langa S, Vezza T, Landete JM, Hidalgo-Garcia L, Algieri F, Mayer MJ, Narbad A, Garcia-Lafuente A, Medina M, Rodriguez-Nogales A, Rodriguez-Cabezas ME, Galvez J, Arques JL.},
journal = {Nutrients},
year = {2021},
doi = {10.3390/nu13061860},
pmid = {34072532}
}
@article{lin386466,
title = {Prokaryotic population dynamics and interactions in an AnSBBR using tequila vinasses as substrate in co-digestion with acid hydrolysates of Agave tequilana var. azul bagasse for hydrogen production.},
author = {Gabriel-Barajas JE, Arreola-Vargas J, Toledo-Cervantes A, Mendez-Acosta HO, Rivera-Gonzalez JC, Snell-Castro R.},
journal = {J Appl Microbiol},
year = {2022},
doi = {10.1111/jam.15196},
pmid = {34189819}
}
@article{lin386660,
title = {Role of Gut Microbiota in Multiple Sclerosis and Potential Therapeutic Implications.},
author = {Wang X, Liang Z, Wang S, Ma D, Zhu M, Feng J.},
journal = {Curr Neuropharmacol},
year = {2022},
doi = {10.2174/1570159x19666210629145351},
pmid = {34191698}
}
@article{lin386682,
title = {Treatment with the Probiotic Product Aviguard® Alleviates Inflammatory Responses during Campylobacter jejuni-Induced Acute Enterocolitis in Mice.},
author = {Heimesaat MM, Weschka D, Mousavi S, Bereswill S.},
journal = {Int J Mol Sci},
year = {2021},
doi = {10.3390/ijms22136683},
pmid = {34206478}
}
@article{lin386624,
title = {nZVI Impacts Substrate Conversion and Microbiome Composition in Chain Elongation From D- and L-Lactate Substrates.},
author = {Contreras-Davila CA, Esveld J, Buisman CJN, Strik DPBTB.},
journal = {Front Bioeng Biotechnol},
year = {2021},
doi = {10.3389/fbioe.2021.666582},
pmid = {34211964}
}
@article{lin107081,
title = {A Series of Efficient Umbrella Modeling Strategies to Track Irradiation-Mutation Strains Improving Butyric Acid Production From the Pre-development Earlier Stage Point of View.},
author = {Cao L, Gao Y, Wang XZ, Shu GY, Hu YN, Xie ZP, Cui W, Guo XP, Zhou X.},
journal = {Front Bioeng Biotechnol},
year = {2021},
doi = {10.3389/fbioe.2021.609345},
pmid = {34222207}
}
@article{lin386703,
title = {Dynamics of dark fermentation microbial communities in the light of lactate and butyrate production.},
author = {Detman A, Laubitz D, Chojnacka A, Kiela PR, Salamon A, Barberan A, Chen Y, Yang F, Blaszczyk MK, Sikora A.},
journal = {Microbiome},
year = {2021},
doi = {10.1186/s40168-021-01105-x},
pmid = {34261525}
}
@article{lin107119,
title = {Renewable fatty acid ester production in Clostridium.},
author = {Feng J, Zhang J, Ma Y, Feng Y, Wang S, Guo N, Wang H, Wang P, Jimenez-Bonilla P, Gu Y, Zhou J, Zhang ZT, Cao M, Jiang D, Wang S, Liu XW, Shao Z, Borovok I, Huang H, Wang Y.},
journal = {Nat Commun},
year = {2021},
doi = {10.1038/s41467-021-24038-3},
pmid = {34272383}
}
@article{lin107107,
title = {Biodegradation of aromatic pollutants meets synthetic biology.},
author = {Xiang L, Li G, Wen L, Su C, Liu Y, Tang H, Dai J.},
journal = {Synth Syst Biotechnol},
year = {2021},
doi = {10.1016/j.synbio.2021.06.001},
pmid = {34278013}
}
@article{lin386498,
title = {High Performance of Biohydrogen Production in Packed-Filter Bioreactor via Optimizing Packed-Filter Position.},
author = {Chu CY, Zheng JL, Chen TH, Bhuyar P.},
journal = {Int J Environ Res Public Health},
year = {2021},
doi = {10.3390/ijerph18147462},
pmid = {34299912}
}
@article{lin386547,
title = {Butyryl/Caproyl-CoA:Acetate CoA-transferase: cloning, expression and characterization of the key enzyme involved in medium-chain fatty acid biosynthesis.},
author = {Yang Q, Guo S, Lu Q, Tao Y, Zheng D, Zhou Q, Liu J.},
journal = {Biosci Rep},
year = {2021},
doi = {10.1042/bsr20211135},
pmid = {34338280}
}
@article{lin386531,
title = {Adaptability of a Caproate-Producing Bacterium Contributes to Its Dominance in an Anaerobic Fermentation System.},
author = {Wang H, Gu Y, Zhou W, Zhao D, Qiao Z, Zheng J, Gao J, Chen X, Ren C, Xu Y.},
journal = {Appl Environ Microbiol},
year = {2021},
doi = {10.1128/aem.01203-21},
pmid = {34378978}
}
@article{lin386739,
title = {Novel Lytic Enzyme of Prophage Origin from Clostridium botulinum E3 Strain Alaska E43 with Bactericidal Activity against Clostridial Cells.},
author = {Morzywolek A, Plotka M, Kaczorowska AK, Szadkowska M, Kozlowski LP, Wyrzykowski D, Makowska J, Waters JJ, Swift SM, Donovan DM, Kaczorowski T.},
journal = {Int J Mol Sci},
year = {2021},
doi = {10.3390/ijms22179536},
pmid = {34502443}
}
@article{lin386507,
title = {Improving sustainable hydrogen production from green waste: [FeFe]-hydrogenases quantitative gene expression RT-qPCR analysis in presence of autochthonous consortia.},
author = {Arizzi M, Morra S, Gilardi G, Pugliese M, Gullino ML, Valetti F.},
journal = {Biotechnol Biofuels},
year = {2021},
doi = {10.1186/s13068-021-02028-3},
pmid = {34530890}
}
@article{lin386481,
title = {Colorimetric Point-of-Care Detection of Clostridium tyrobutyricum Spores in Milk Samples.},
author = {Cecere P, Gatto F, Cortimiglia C, Bassi D, Lucchini F, Cocconcelli PS, Pompa PP.},
journal = {Biosensors (Basel)},
year = {2021},
doi = {10.3390/bios11090293},
pmid = {34562883}
}
@article{lin386460,
title = {Draft Genome Sequences of 12 Clostridium tyrobutyricum Strains Isolated from Raw Milk and Cheese.},
author = {Podrzaj L, Burtscher J, Domig KJ.},
journal = {Microbiol Resour Announc},
year = {2021},
doi = {10.1128/mra.00735-21},
pmid = {34591680}
}
@article{lin386737,
title = {Lactobacillus rhamnosus GR-1 Prevents Escherichia coli-Induced Apoptosis Through PINK1/Parkin-Mediated Mitophagy in Bovine Mastitis.},
author = {Li Y, Zhu Y, Chu B, Liu N, Chen S, Wang J.},
journal = {Front Immunol},
year = {2021},
doi = {10.3389/fimmu.2021.715098},
pmid = {34594329}
}
@article{lin386699,
title = {Structural Transformation and Creativity Induced by Biological Agents during Fermentation of Edible Nuts from Terminalia catappa.},
author = {Odutayo OE, Adegboye BE, Omonigbehin EA, Olawole TD, Ogunlana OO, Afolabi IS.},
journal = {Molecules},
year = {2021},
doi = {10.3390/molecules26195874},
pmid = {34641422}
}
@article{lin386674,
title = {Enterococcus spp. as a Producer and Target of Bacteriocins: A Double-Edged Sword in the Antimicrobial Resistance Crisis Context.},
author = {Almeida-Santos AC, Novais C, Peixe L, Freitas AR.},
journal = {Antibiotics (Basel)},
year = {2021},
doi = {10.3390/antibiotics10101215},
pmid = {34680796}
}
@article{lin386575,
title = {Propionic Acid and Sodium Benzoate Affected Biogenic Amine Formation, Microbial Community, and Quality of Oat Silage.},
author = {Jia T, Yun Y, Yu Z.},
journal = {Front Microbiol},
year = {2021},
doi = {10.3389/fmicb.2021.750920},
pmid = {34819922}
}
@article{lin386760,
title = {Reprogramming microbial populations using a programmed lysis system to improve chemical production.},
author = {Diao W, Guo L, Ding Q, Gao C, Hu G, Chen X, Li Y, Zhang L, Chen W, Chen J, Liu L.},
journal = {Nat Commun},
year = {2021},
doi = {10.1038/s41467-021-27226-3},
pmid = {34824227}
}
@article{lin107138,
title = {Comparative Genomic and Physiological Analysis against Clostridium scindens Reveals Eubacterium sp. c-25 as an Atypical Deoxycholic Acid Producer of the Human Gut Microbiota.},
author = {Song I, Gotoh Y, Ogura Y, Hayashi T, Fukiya S, Yokota A.},
journal = {Microorganisms},
year = {2021},
doi = {10.3390/microorganisms9112254},
pmid = {34835380}
}
@article{lin386448,
title = {Biosorption of lead ions from aqueous solution by Clostridium tyrobutyricum immobilized in macroporous Ca-alginate-lignin beads.},
author = {Zheng W, Zhao Q, Malkmes MJ, Gao G, He J, Zheng L, Jiang L.},
journal = {J Appl Microbiol},
year = {2022},
doi = {10.1111/jam.15387},
pmid = {34837317}
}
@article{lin386692,
title = {Efficient lactic acid production from dilute acid-pretreated lignocellulosic biomass by a synthetic consortium of engineered Pseudomonas putida and Bacillus coagulans.},
author = {Zou L, Ouyang S, Hu Y, Zheng Z, Ouyang J.},
journal = {Biotechnol Biofuels},
year = {2021},
doi = {10.1186/s13068-021-02078-7},
pmid = {34838093}
}
@article{lin386773,
title = {Regulation of common neurological disorders by gut microbial metabolites.},
author = {Park J, Kim CH.},
journal = {Exp Mol Med},
year = {2021},
doi = {10.1038/s12276-021-00703-x},
pmid = {34857900}
}
@article{lin386683,
title = {Reactor microbiome enriches vegetable oil with n-caproate and n-caprylate for potential functionalized feed additive production via extractive lactate-based chain elongation.},
author = {Contreras-Davila CA, Zuidema N, Buisman CJN, Strik DPBTB.},
journal = {Biotechnol Biofuels},
year = {2021},
doi = {10.1186/s13068-021-02084-9},
pmid = {34872602}
}
@article{lin386524,
title = {A Potential Probiotic for Diarrhea: Clostridium tyrobutyricum Protects Against LPS-Induced Epithelial Dysfunction via IL-22 Produced By Th17 Cells in the Ileum.},
author = {Xiao Z, Liu L, Pei X, Sun W, Jin Y, Yang ST, Wang M.},
journal = {Front Immunol},
year = {2021},
doi = {10.3389/fimmu.2021.758227},
pmid = {34917080}
}
@article{lin386453,
title = {Development of a risk assessment model to predict the occurrence of late blowing defect in Gouda cheese and evaluate potential intervention strategies.},
author = {Qian C, Martin NH, Wiedmann M, Trmcic A.},
journal = {J Dairy Sci},
year = {2022},
doi = {10.3168/jds.2021-21206},
pmid = {35086711}
}
@article{lin107103,
title = {Anaerobically Digesting Hazardous Waste Pichia pastoris Associated with Butyric Acid Cleaner Production.},
author = {Cheng W, Chen X, Gong L, Wei J, Ding J, Shi Z.},
journal = {ACS Omega},
year = {2022},
doi = {10.1021/acsomega.1c05840},
pmid = {35097286}
}
@article{lin386720,
title = {High-throughput qPCR and 16S rRNA gene amplicon sequencing as complementary methods for the investigation of the cheese microbiota.},
author = {Dreier M, Meola M, Berthoud H, Shani N, Wechsler D, Junier P.},
journal = {BMC Microbiol},
year = {2022},
doi = {10.1186/s12866-022-02451-y},
pmid = {35130830}
}
@article{lin386511,
title = {Study on the Effect of Key Genes ME2 and adhE during Luzhou-Flavor Baijiu Brewing.},
author = {Zhou W, Xia Y, Zhao Y, Wang Y, Wu Z, Suyama T, Zhang W.},
journal = {Foods},
year = {2022},
doi = {10.3390/foods11050700},
pmid = {35267332}
}
@article{lin386638,
title = {Inhibitory Effect of Lactiplantibacillusplantarum and Lactococcus lactis Autochtonous Strains against Listeria monocytogenes in a Laboratory Cheese Model.},
author = {Pisano MB, Fadda ME, Viale S, Deplano M, Mereu F, Blazic M, Cosentino S.},
journal = {Foods},
year = {2022},
doi = {10.3390/foods11050715},
pmid = {35267348}
}
@article{lin386735,
title = {Increased Butyrate Production in Clostridium saccharoperbutylacetonicum from Lignocellulose-Derived Sugars.},
author = {Baur ST, Markussen S, Di Bartolomeo F, Poehlein A, Baker A, Jenkinson ER, Daniel R, Wentzel A, Durre P.},
journal = {Appl Environ Microbiol},
year = {2022},
doi = {10.1128/aem.02419-21},
pmid = {35311509}
}
@article{lin386721,
title = {A paradigm shift towards production of sustainable bioenergy and advanced products from Cannabis/hemp biomass in Canada.},
author = {Brar KK, Raheja Y, Chadha BS, Magdouli S, Brar SK, Yang YH, Bhatia SK, Koubaa A.},
journal = {Biomass Convers Biorefin},
year = {2022},
doi = {10.1007/s13399-022-02570-6},
pmid = {35342682}
}
@article{lin386756,
title = {An Overview of Antimicrobial Activity of Lysozyme and Its Functionality in Cheese.},
author = {Khorshidian N, Khanniri E, Koushki MR, Sohrabvandi S, Yousefi M.},
journal = {Front Nutr},
year = {2022},
doi = {10.3389/fnut.2022.833618},
pmid = {35356735}
}
@article{lin386733,
title = {Unraveling the Genotypic and Phenotypic Diversity of the Psychrophilic Clostridium estertheticum Complex, a Meat Spoilage Agent.},
author = {Wambui J, Stevens MJA, Cernela N, Stephan R.},
journal = {Front Microbiol},
year = {2022},
doi = {10.3389/fmicb.2022.856810},
pmid = {35418954}
}
@article{lin386626,
title = {Energy-efficient recovery of fermented butyric acid using octyl acetate extraction.},
author = {Oh HW, Lee SC, Woo HC, Kim YH.},
journal = {Biotechnol Biofuels Bioprod},
year = {2022},
doi = {10.1186/s13068-022-02146-6},
pmid = {35524283}
}
@article{lin8239,
title = {Elimination of carbon catabolite repression in Clostridium tyrobutyricum for enhanced butyric acid production from lignocellulosic hydrolysates.},
author = {Fu H, Zhang H, Guo X, Yang L, Wang J},
journal = {Bioresour Technol},
year = {2022},
doi = {10.1016/j.biortech.2022.127320},
pmid = {35589044}
}
@article{lin386745,
title = {The Use of Bacteriophages in Biotechnology and Recent Insights into Proteomics.},
author = {Abril AG, Carrera M, Notario V, Sanchez-Perez A, Villa TG.},
journal = {Antibiotics (Basel)},
year = {2022},
doi = {10.3390/antibiotics11050653},
pmid = {35625297}
}
@article{lin386669,
title = {The Improvement of Semen Quality by Dietary Fiber Intake Is Positively Related With Gut Microbiota and SCFA in a Boar Model.},
author = {Lin Y, Wang K, Che L, Fang Z, Xu S, Feng B, Zhuo Y, Li J, Wu C, Zhang J, Xiong H, Yu C, Wu.},
journal = {Front Microbiol},
year = {2022},
doi = {10.3389/fmicb.2022.863315},
pmid = {35633720}
}
@article{lin386646,
title = {Metabolite-Based Mutualistic Interaction between Two Novel Clostridial Species from Pit Mud Enhances Butyrate and Caproate Production.},
author = {Sun H, Chai LJ, Fang GY, Lu ZM, Zhang XJ, Wang ST, Shen CH, Shi JS, Xu ZH.},
journal = {Appl Environ Microbiol},
year = {2022},
doi = {10.1128/aem.00484-22},
pmid = {35695571}
}
@article{lin386472,
title = {Comparative Genomics Provides Insights Into Genetic Diversity of Clostridium tyrobutyricum and Potential Implications for Late Blowing Defects in Cheese.},
author = {Podrzaj L, Burtscher J, Domig KJ.},
journal = {Front Microbiol},
year = {2022},
doi = {10.3389/fmicb.2022.889551},
pmid = {35722315}
}
@article{lin107093,
title = {Model-based driving mechanism analysis for butyric acid production in Clostridium tyrobutyricum.},
author = {Feng J, Guo X, Cai F, Fu H, Wang J.},
journal = {Biotechnol Biofuels Bioprod},
year = {2022},
doi = {10.1186/s13068-022-02169-z},
pmid = {35752796}
}
@article{lin386708,
title = {Little Impact of NaCl Reduction in Swiss-Type Cheese.},
author = {Gagnaire V, Lecomte X, Richoux R, Genay M, Jardin J, Briard-Bion V, Kerjean JR, Thierry A.},
journal = {Front Nutr},
year = {2022},
doi = {10.3389/fnut.2022.888179},
pmid = {35782920}
}
@article{lin107094,
title = {Functional Characterization of Clostridium tyrobutyricum L319: A Promising Next-Generation Probiotic for Short-Chain Fatty Acid Production.},
author = {Yang Z, Amal FE, Yang L, Liu Y, Zhu L, Zhu Z, Jiang L.},
journal = {Front Microbiol},
year = {2022},
doi = {10.3389/fmicb.2022.926710},
pmid = {35783414}
}
@article{lin386688,
title = {Using PacBio SMRT Sequencing Technology and Metabolomics to Explore the Microbiota-Metabolome Interaction Related to Silage Fermentation of Woody Plant.},
author = {Du Z, Sun L, Lin Y, Yang F, Cai Y.},
journal = {Front Microbiol},
year = {2022},
doi = {10.3389/fmicb.2022.857431},
pmid = {35794909}
}
@article{lin386707,
title = {Alleviation of Metabolic Disturbance by Substituting Kanjang High in Bacillus for Salt through Modulation of Gut Microbiota in Estrogen-Deficient Rats.},
author = {Park S, Zhang T, Yue Y, Jeong SJ, Ryu MS, Wu X, Yang HJ, Jeong DY.},
journal = {Foods},
year = {2022},
doi = {10.3390/foods11131951},
pmid = {35804768}
}
@article{lin107109,
title = {Exploiting the Type I-B CRISPR Genome Editing System in Thermoanaerobacterium aotearoense SCUT27 and Engineering the Strain for Enhanced Ethanol Production.},
author = {Dai K, Fu H, Guo X, Qu C, Lan Y, Wang J.},
journal = {Appl Environ Microbiol},
year = {2022},
doi = {10.1128/aem.00751-22},
pmid = {35862665}
}
@article{lin386685,
title = {Butyrate Treatment of DSS-Induced Ulcerative Colitis Affects the Hepatic Drug Metabolism in Mice.},
author = {Jourova L, Satka S, Frybortova V, Zapletalova I, Anzenbacher P, Anzenbacherova E, Hermanova PP, Drabonova B, Srutkova D, Kozakova H, Hudcovic T.},
journal = {Front Pharmacol},
year = {2022},
doi = {10.3389/fphar.2022.936013},
pmid = {35928257}
}
@article{lin386751,
title = {The gut microbiome and Alzheimer's disease: Complex and bidirectional interactions.},
author = {Tarawneh R, Penhos E.},
journal = {Neurosci Biobehav Rev},
year = {2022},
doi = {10.1016/j.neubiorev.2022.104814},
pmid = {35934087}
}
@article{lin386684,
title = {Identification of gut metabolites associated with Parkinson's disease using bioinformatic analyses.},
author = {Yan J, Feng X, Zhou X, Zhao M, Xiao H, Li R, Shen H.},
journal = {Front Aging Neurosci},
year = {2022},
doi = {10.3389/fnagi.2022.927625},
pmid = {35959296}
}
@article{lin386493,
title = {Lentinan -triggered butyrate-producing bacteria drive the expulsion of the intestinal helminth Trichinella spiralis in mice.},
author = {Jin X, Liu Y, Vallee I, Karadjian G, Liu M, Liu X.},
journal = {Front Immunol},
year = {2022},
doi = {10.3389/fimmu.2022.926765},
pmid = {35967395}
}
@article{lin107134,
title = {Promotion of Nitrogen Fixation of Diverse Heterotrophs by Solid-Phase Humin.},
author = {Dey S, Kasai T, Katayama A.},
journal = {Front Microbiol},
year = {2022},
doi = {10.3389/fmicb.2022.853411},
pmid = {35992702}
}
@article{lin386681,
title = {Electroacupuncture attenuates surgical pain-induced delirium-like behavior in mice via remodeling gut microbiota and dendritic spine.},
author = {Yang L, Ding W, Dong Y, Chen C, Zeng Y, Jiang Z, Gan S, You Z, Zhao Y, Zhang Y, Ren X, Wang S, Dai J, Chen Z, Zhu S, Chen L, Shen S, Mao J, Xie Z.},
journal = {Front Immunol},
year = {2022},
doi = {10.3389/fimmu.2022.955581},
pmid = {36003380}
}
@article{lin386457,
title = {New insights into microbial interactions and putative competitive mechanisms during the hydrogen production from tequila vinasses.},
author = {Toledo-Cervantes A, Mendez-Acosta HO, Arreola-Vargas J, Gabriel-Barajas JE, Aguilar-Mota MN, Snell-Castro R.},
journal = {Appl Microbiol Biotechnol},
year = {2022},
doi = {10.1007/s00253-022-12143-2},
pmid = {36071291}
}
@article{lin386801,
title = {Revealing the Characteristics of Glucose- and Lactate-Based Chain Elongation for Caproate Production by Caproicibacterium lactatifermentans through Transcriptomic, Bioenergetic, and Regulatory Analyses.},
author = {Wang H, Zhou W, Gao J, Ren C, Xu Y.},
journal = {mSystems},
year = {2022},
doi = {10.1128/msystems.00534-22},
pmid = {36073803}
}
@article{lin107114,
title = {A consolidated review of commercial-scale high-value products from lignocellulosic biomass.},
author = {Zheng B, Yu S, Chen Z, Huo YX.},
journal = {Front Microbiol},
year = {2022},
doi = {10.3389/fmicb.2022.933882},
pmid = {36081794}
}
@article{lin107110,
title = {Improved assessments of bulk milk microbiota composition via sample preparation and DNA extraction methods.},
author = {Xue Z, Marco ML.},
journal = {PLoS One},
year = {2022},
doi = {10.1371/journal.pone.0267992},
pmid = {36107863}
}
@article{lin386678,
title = {Evaluating the Quality of Cheese Slices Packaged with Na-Alginate Edible Films Supplemented with Functional Lactic Acid Bacteria Cultures after High-Pressure Processing.},
author = {Papadopoulou OS, Argyri AA, Bikouli VC, Lambrinea E, Chorianopoulos N.},
journal = {Foods},
year = {2022},
doi = {10.3390/foods11182855},
pmid = {36140989}
}
@article{lin386647,
title = {Effect of tea polyphenols on the fermentation quality, protein preservation, antioxidant capacity and bacterial community of stylo silage.},
author = {Huang Y, Qiu C, Wang Y, Zhang W, He L.},
journal = {Front Microbiol},
year = {2022},
doi = {10.3389/fmicb.2022.993750},
pmid = {36160248}
}
@article{lin386586,
title = {Dynamic Changes in Fermentation Quality and Structure and Function of the Microbiome during Mixed Silage of Sesbania cannabina and Sweet Sorghum Grown on Saline-Alkaline Land.},
author = {Wang T, Zhang J, Shi W, Sun J, Xia T, Huang F, Liu Y, Li H, Teng K, Zhong J.},
journal = {Microbiol Spectr},
year = {2022},
doi = {10.1128/spectrum.02483-22},
pmid = {36190422}
}
@article{lin386726,
title = {Ropiness in Bread-A Re-Emerging Spoilage Phenomenon.},
author = {Pacher N, Burtscher J, Johler S, Etter D, Bender D, Fieseler L, Domig KJ.},
journal = {Foods},
year = {2022},
doi = {10.3390/foods11193021},
pmid = {36230100}
}
@article{lin107091,
title = {The Physiological Functions of AbrB on Sporulation, Biofilm Formation and Carbon Source Utilization in Clostridium tyrobutyricum.},
author = {Luo K, Guo X, Zhang H, Fu H, Wang J.},
journal = {Bioengineering (Basel)},
year = {2022},
doi = {10.3390/bioengineering9100575},
pmid = {36290543}
}
@article{lin56930,
title = {Deciphering of the Mannitol Metabolism Pathway in Clostridium tyrobutyricum ATCC 25755 by Comparative Transcriptome Analysis.},
author = {Fu H, Yang L, Zhang H, Wang J},
journal = {Appl Biochem Biotechnol},
year = {2022},
doi = {10.1007/s12010-022-04209-8},
pmid = {36322284}
}
@article{lin386672,
title = {Cellulase Immobilization on Nanostructured Supports for Biomass Waste Processing.},
author = {Sulman AM, Matveeva VG, Bronstein LM.},
journal = {Nanomaterials (Basel)},
year = {2022},
doi = {10.3390/nano12213796},
pmid = {36364572}
}
@article{lin386593,
title = {Mixotrophic chain elongation with syngas and lactate as electron donors.},
author = {Baleeiro FCF, Raab J, Kleinsteuber S, Neumann A, Strauber H.},
journal = {Microb Biotechnol},
year = {2023},
doi = {10.1111/1751-7915.14163},
pmid = {36378491}
}
@article{lin386794,
title = {Advantages and limitations of experimental autoimmune encephalomyelitis in breaking down the role of the gut microbiome in multiple sclerosis.},
author = {Melamed E, Palmer JL, Fonken C.},
journal = {Front Mol Neurosci},
year = {2022},
doi = {10.3389/fnmol.2022.1019877},
pmid = {36407764}
}
@article{lin386634,
title = {Microbiological Characterization of Actinotignum schaalii Strains Causing Invasive Infections during a Multiyear Period in a Large Canadian Health Care Region.},
author = {Lieu A, Mah J, Peirano G, Somayaji R, Church D.},
journal = {Microbiol Spectr},
year = {2022},
doi = {10.1128/spectrum.03442-22},
pmid = {36409090}
}
@article{lin56929,
title = {Transcriptome analysis reveals reasons for the low tolerance of Clostridium tyrobutyricum to furan derivatives.},
author = {Suo Y, Li W, Wan L, Luo L, Liu S, Qin S, Wang J},
journal = {Appl Microbiol Biotechnol},
year = {2022},
doi = {10.1007/s00253-022-12281-7},
pmid = {36418543}
}
@article{lin386564,
title = {The gut microbiota is important for the maintenance of blood-cerebrospinal fluid barrier integrity.},
author = {Knox EG, Lynch CMK, Lee YS, O'Driscoll CM, Clarke G, Cryan JF, Aburto MR.},
journal = {Eur J Neurosci},
year = {2023},
doi = {10.1111/ejn.15878},
pmid = {36453579}
}
@article{lin386446,
title = {Inhibitory activity of aromatic plant extracts against dairy-related Clostridium species and their use to prevent the late blowing defect of cheese.},
author = {Avila M, Calzada J, Munoz-Tebar N, Sanchez C, Ortiz de Elguea-Culebras G, Carmona M, Molina A, Berruga MI, Garde S.},
journal = {Food Microbiol},
year = {2023},
doi = {10.1016/j.fm.2022.104185},
pmid = {36462831}
}
@article{lin386657,
title = {Functional production of clostridial circularin A in Lactococcus lactis NZ9000 and mutational analysis of its aromatic and cationic residues.},
author = {Liu F, van Heel AJ, Chen J, Kuipers OP.},
journal = {Front Microbiol},
year = {2022},
doi = {10.3389/fmicb.2022.1026290},
pmid = {36504829}
}
@article{lin386704,
title = {LAMP-Based Point-of-Care Biosensors for Rapid Pathogen Detection.},
author = {Das D, Lin CW, Chuang HS.},
journal = {Biosensors (Basel)},
year = {2022},
doi = {10.3390/bios12121068},
pmid = {36551035}
}
@article{lin386441,
title = {Isolation and characterization of new bacteriophages active against Clostridium tyrobutyricum and their role in preventing the late blowing defect of cheese.},
author = {Avila M, Sanchez C, Calzada J, Mayer MJ, Berruga MI, Lopez-Diaz TM, Narbad A, Garde S.},
journal = {Food Res Int},
year = {2023},
doi = {10.1016/j.foodres.2022.112222},
pmid = {36596151}
}
@article{lin386469,
title = {Bioinformatics and metabolic flux analysis highlight a new mechanism involved in lactate oxidation in Clostridium tyrobutyricum.},
author = {Munier E, Licandro H, Beuvier E, Cachon R.},
journal = {Int Microbiol},
year = {2023},
doi = {10.1007/s10123-022-00316-y},
pmid = {36609955}
}
@article{lin386485,
title = {Lactobacillus plantarum and propionic acid improve the fermentation quality of high-moisture amaranth silage by altering the microbial community composition.},
author = {Zhao M, Wang Z, Du S, Sun L, Bao J, Hao J, Ge G.},
journal = {Front Microbiol},
year = {2022},
doi = {10.3389/fmicb.2022.1066641},
pmid = {36620031}
}
@article{lin386450,
title = {Construction of a Microbial Consortium for the De Novo Synthesis of Butyl Butyrate from Renewable Resources.},
author = {Lu J, Jiang W, Dong W, Zhou J, Zhang W, Jiang Y, Xin F, Jiang M.},
journal = {J Agric Food Chem},
year = {2023},
doi = {10.1021/acs.jafc.2c07650},
pmid = {36734010}
}
@article{lin107108,
title = {Metabolic Engineering of Microorganisms to Produce Pyruvate and Derived Compounds.},
author = {Luo Q, Ding N, Liu Y, Zhang H, Fang Y, Yin L.},
journal = {Molecules},
year = {2023},
doi = {10.3390/molecules28031418},
pmid = {36771084}
}
@article{lin386698,
title = {Developing a genetic engineering method for Acetobacterium wieringae to expand one-carbon valorization pathways.},
author = {Moreira JPC, Heap JT, Alves JI, Domingues L.},
journal = {Biotechnol Biofuels Bioprod},
year = {2023},
doi = {10.1186/s13068-023-02259-6},
pmid = {36788587}
}
@article{lin107096,
title = {Construction of Clostridium tyrobutyricum strain and ionic membrane technology combination pattern for refinery final molasses recovery and butyric acid production.},
author = {Wang B, Zhou X, Liu W, Liu MH, Mo D, Wu QF, Wang YJ, Zhang MM, Chen L, Yuan S, Zhou B, Li X, Lu D.},
journal = {Front Microbiol},
year = {2023},
doi = {10.3389/fmicb.2023.1065953},
pmid = {36825085}
}
@article{lin386608,
title = {A MALDI-TOF MS library for rapid identification of human commensal gut bacteria from the class Clostridia.},
author = {Asare PT, Lee CH, Hurlimann V, Teo Y, Cuenod A, Akduman N, Gekeler C, Afrizal A, Corthesy M, Kohout C, Thomas V, de Wouters T, Greub G, Clavel T, Pamer EG, Egli A, Maier L, Vonaesch P.},
journal = {Front Microbiol},
year = {2023},
doi = {10.3389/fmicb.2023.1104707},
pmid = {36896425}
}
@article{lin386648,
title = {The Effect of Supplementation Using a Mixture of Fish Oil and Linseed on the Level of Immunomodulatory Components in Bovine Colostrum.},
author = {Grodkowska K, Golebiewski M, Slosarz J, Sakowski T, Puppel K.},
journal = {Molecules},
year = {2023},
doi = {10.3390/molecules28052154},
pmid = {36903401}
}
@article{lin107089,
title = {De novo biosynthesis of butyl butyrate in engineered Clostridium tyrobutyricum.},
author = {Guo X, Zhang H, Feng J, Yang L, Luo K, Fu H, Wang J.},
journal = {Metab Eng},
year = {2023},
doi = {10.1016/j.ymben.2023.03.009},
pmid = {36948242}
}
@article{lin386603,
title = {Production of Tetramethylpyrazine from Cane Molasses by Bacillus sp. TTMP20.},
author = {Li Y, Luo L, Ding X, Zhang X, Gan S, Shang C.},
journal = {Molecules},
year = {2023},
doi = {10.3390/molecules28062640},
pmid = {36985611}
}
@article{lin107135,
title = {Complete genome sequences and comparative secretomic analysis for the industrially cultivated edible mushroom Lyophyllum decastes reveals insights on evolution and lignocellulose degradation potential.},
author = {Xu L, Yang W, Qiu T, Gao X, Zhang H, Zhang S, Cui H, Guo L, Yu H, Yu H.},
journal = {Front Microbiol},
year = {2023},
doi = {10.3389/fmicb.2023.1137162},
pmid = {37032898}
}
@article{lin386455,
title = {Clostridium tyrobutyricum occurrence in silages and cattle feed: Use of molecular and simulation data to optimize predictive models.},
author = {Mosconi M, Fontana A, Daza MVB, Bassi D, Gallo A.},
journal = {Front Microbiol},
year = {2023},
doi = {10.3389/fmicb.2023.1118646},
pmid = {37051517}
}
@article{lin386576,
title = {Development of a Magnetic Bead-Based Method for Specific Detection of Enterococcus faecalis Using C-Terminal Domain of ECP3 Phage Endolysin.},
author = {Choi YJ, Kim S, Kim J.},
journal = {J Microbiol Biotechnol},
year = {2023},
doi = {10.4014/jmb.2302.02033},
pmid = {37164751}
}
@article{lin386534,
title = {Low-Level Clostridial Spores' Milk to Limit the Onset of Late Blowing Defect in Lysozyme-Free, Grana-Type Cheese.},
author = {Carminati D, Bonvini B, Francolino S, Ghiglietti R, Locci F, Tidona F, Mariut M, Abeni F, Zago M, Giraffa G.},
journal = {Foods},
year = {2023},
doi = {10.3390/foods12091880},
pmid = {37174418}
}
@article{lin386440,
title = {Hyperspectral imaging through vacuum packaging for monitoring cheese biochemical transformation caused by Clostridium metabolism.},
author = {Reis MM, Dixit Y, Carr A, Tu C, Palevich F, Gupta T, Reis MG.},
journal = {Food Res Int},
year = {2023},
doi = {10.1016/j.foodres.2023.112866},
pmid = {37254314}
}
@article{lin386629,
title = {A (S)-3-Hydroxybutyrate Dehydrogenase Belonging to the 3-Hydroxyacyl-CoA Dehydrogenase Family Facilitates Hydroxyacid Degradation in Anaerobic Bacteria.},
author = {Zhou Y, Wei Y, Jiang L, Zhang Y, Jiao X.},
journal = {Appl Environ Microbiol},
year = {2023},
doi = {10.1128/aem.00366-23},
pmid = {37255440}
}
@article{lin386598,
title = {Endometrial responses to bacterial and viral infection: a scoping review.},
author = {Lindsay CV, Potter JA, Grimshaw AA, Abrahams VM, Tong M.},
journal = {Hum Reprod Update},
year = {2023},
doi = {10.1093/humupd/dmad013},
pmid = {37290428}
}
@article{lin386644,
title = {Importance of Pre-Milking Udder Hygiene to Reduce Transfer of Clostridial Spores from Teat Skin to Raw Milk.},
author = {Burtscher J, Rudavsky T, Zitz U, Neubauer V, Domig KJ.},
journal = {Microorganisms},
year = {2023},
doi = {10.3390/microorganisms11051337},
pmid = {37317311}
}
@article{lin107082,
title = {A metagenome-level analysis of a microbial community fermenting ultra-filtered milk permeate.},
author = {Walters KA, Mohan G, Myers KS, Ingle AT, Donohue TJ, Noguera DR.},
journal = {Front Bioeng Biotechnol},
year = {2023},
doi = {10.3389/fbioe.2023.1173656},
pmid = {37324413}
}
@article{lin386673,
title = {The survival of blown pack spoilage associated Clostridium estertheticum and Clostridium gasigenes spores during the ensiling of grass.},
author = {Esteves E, Whyte P, Gupta TB, Bolton D.},
journal = {FEMS Microbes},
year = {2021},
doi = {10.1093/femsmc/xtab013},
pmid = {37334232}
}
@article{lin386697,
title = {Dissecting the Arginine and Lysine Biosynthetic Pathways and Their Relationship in Haloarchaeon Natrinema gari J7-2 via Endogenous CRISPR-Cas System-Based Genome Editing.},
author = {Wu Y, Zhang J, Wang B, Zhang Y, Li H, Liu Y, Yin J, He D, Luo H, Gan F, Tang B, Tang XF.},
journal = {Microbiol Spectr},
year = {2023},
doi = {10.1128/spectrum.00288-23},
pmid = {37347159}
}
@article{lin386444,
title = {Composition and fate of heat-resistant anaerobic spore-formers in the milk powder production line.},
author = {Porcellato D, Kristiansen H, Finton MD, Leanti La Rosa S, da Silva Duarte V, Skeie SB.},
journal = {Int J Food Microbiol},
year = {2023},
doi = {10.1016/j.ijfoodmicro.2023.110281},
pmid = {37356408}
}
@article{lin107101,
title = {Influence of Emulsifying Salts on the Growth of Bacillus thuringiensis CFBP 3476 and Clostridium perfringens ATCC 13124 in Processed Cheese.},
author = {Fusieger A, da Silva RR, Cavicchioli VQ, Rodrigues RDS, Honorato JA, de Jesus Silva SR, Pena ML, Caggia C, Nero LA, de Carvalho AF.},
journal = {Foods},
year = {2022},
doi = {10.3390/foods11203217},
pmid = {37430967}
}
@article{lin107084,
title = {The Gram-positive bacterium Romboutsia ilealis harbors a polysaccharide synthase that can produce (1,3;1,4)-beta-D-glucans.},
author = {Chang SC, Kao MR, Saldivar RK, Diaz-Moreno SM, Xing X, Furlanetto V, Yayo J, Divne C, Vilaplana F, Abbott DW, Hsieh YSY.},
journal = {Nat Commun},
year = {2023},
doi = {10.1038/s41467-023-40214-z},
pmid = {37500617}
}
@article{lin386549,
title = {Pathogenicity and Antibiotic Resistance Diversity in Clostridium perfringens Isolates from Poultry Affected by Necrotic Enteritis in Canada.},
author = {Garcia-Vela S, Martinez-Sancho A, Said LB, Torres C, Fliss I.},
journal = {Pathogens},
year = {2023},
doi = {10.3390/pathogens12070905},
pmid = {37513752}
}
@article{lin386670,
title = {Cellulase-lactic acid bacteria synergy action regulates silage fermentation of woody plant.},
author = {Du Z, Yamasaki S, Oya T, Cai Y.},
journal = {Biotechnol Biofuels Bioprod},
year = {2023},
doi = {10.1186/s13068-023-02368-2},
pmid = {37542284}
}
@article{lin386554,
title = {Microbial Community Affects Daqu Quality and the Production of Ethanol and Flavor Compounds in Baijiu Fermentation.},
author = {Han PJ, Luo LJ, Han Y, Song L, Zhen P, Han DY, Wei YH, Zhou X, Wen Z, Qiu JZ, Bai FY.},
journal = {Foods},
year = {2023},
doi = {10.3390/foods12152936},
pmid = {37569205}
}
@article{lin386701,
title = {Comparative genomics of the proteostasis network in extreme acidophiles.},
author = {Izquierdo-Fiallo K, Munoz-Villagran C, Orellana O, Sjoberg R, Levican G.},
journal = {PLoS One},
year = {2023},
doi = {10.1371/journal.pone.0291164},
pmid = {37682893}
}
@article{lin386589,
title = {Investigating Structural Defects in Extra Hard Cheese Produced from Low-Temperature Centrifugation of Milk.},
author = {Bettera L, Alinovi M, D'Incecco P, Gatti M, Carini E, Pellegrino L, Bancalari E.},
journal = {Foods},
year = {2023},
doi = {10.3390/foods12173302},
pmid = {37685233}
}
@article{lin386467,
title = {Biofilm formation by heat-resistant dairy bacteria: multispecies biofilm model under static and dynamic conditions.},
author = {Diarra C, Goetz C, Gagnon M, Roy D, Jean J.},
journal = {Appl Environ Microbiol},
year = {2023},
doi = {10.1128/aem.00713-23},
pmid = {37732743}
}
@article{lin386556,
title = {Detection of the Microbial Composition of Some Commercial Fermented Liquid Products via Metagenomic Analysis.},
author = {Celik Dogan C, Yuksel Dolgun HT, Ikiz S, Kirkan S, Parin U.},
journal = {Foods},
year = {2023},
doi = {10.3390/foods12193538},
pmid = {37835192}
}
@article{lin386546,
title = {CRISPR-Cas-Based Engineering of Probiotics.},
author = {Liu L, Helal SE, Peng N.},
journal = {Biodes Res},
year = {2023},
doi = {10.34133/bdr.0017},
pmid = {37849462}
}
@article{lin386665,
title = {Metagenomic and Culture-Based Analyses of Microbial Communities from Petroleum Reservoirs with High-Salinity Formation Water, and Their Biotechnological Potential.},
author = {Kadnikov VV, Ravin NV, Sokolova DS, Semenova EM, Bidzhieva SK, Beletsky AV, Ershov AP, Babich TL, Khisametdinov MR, Mardanov AV, Nazina TN.},
journal = {Biology (Basel)},
year = {2023},
doi = {10.3390/biology12101300},
pmid = {37887010}
}
@article{lin386569,
title = {Histological and electroencephalographic demonstration of probiotic effect for reduce of oxidative stress and apoptosis in experimental traumatic brain injury.},
author = {Karakayali EM, Kocamaz E, Alpay S, Onal T, Oztatlici M, Durusma R, Ozel HF, Mete M, Barutcuoglu M, Kutlu N, Tuglu MI.},
journal = {Ulus Travma Acil Cerrahi Derg},
year = {2023},
doi = {10.14744/tjtes.2023.80743},
pmid = {37889022}
}
@article{lin386434,
title = {Identification, activity and delivery of new LysFA67 endolysin to target cheese spoilage Clostridium tyrobutyricum.},
author = {Sanchez C, Garde S, Landete JM, Calzada J, Baker DJ, Evans R, Narbad A, Mayer MJ, Avila M.},
journal = {Food Microbiol},
year = {2024},
doi = {10.1016/j.fm.2023.104401},
pmid = {37919009}
}
@article{lin107095,
title = {Clostridium butyricum and Clostridium tyrobutyricum: angel or devil for necrotizing enterocolitis?},
author = {Tao R, Zong G, Pan Y, Li H, Cheng P, Deng R, Chen W, Wang A, Xia S, Tang W, Lu Y, Wei Z.},
journal = {mSystems},
year = {2023},
doi = {10.1128/msystems.00732-23},
pmid = {37921463}
}
@article{lin386431,
title = {Engineering of Clostridium tyrobutyricum for butyric acid and butyl butyrate production from cassava starch.},
author = {Guo X, Li X, Feng J, Yue Z, Fu H, Wang J.},
journal = {Bioresour Technol},
year = {2024},
doi = {10.1016/j.biortech.2023.129914},
pmid = {37923229}
}
@article{lin386585,
title = {Effects of xylanase, protease, and xylo-oligosaccharides on growth performance, nutrient utilization, short chain fatty acids, and microbiota in Eimeria-challenged broiler chickens fed high fiber diet.},
author = {Lin Y, Lourenco JM, Olukosi OA.},
journal = {Anim Nutr},
year = {2023},
doi = {10.1016/j.aninu.2023.08.009},
pmid = {38033611}
}
@article{lin107083,
title = {The gut-immune-brain axis in neurodevelopment and neurological disorders.},
author = {Park JC, Im SH.},
journal = {Microbiome Res Rep},
year = {2022},
doi = {10.20517/mrr.2022.11},
pmid = {38046904}
}
@article{lin386618,
title = {Responses of microbial community dynamics, co-occurrences, functional shifts, and natural fermentation profiles of Elymus nutans silage to altitudinal gradients.},
author = {Su R, Li F, Liang Y, Sheoran N, Bai J, Hao L, Ke W, Hu C, Jia M, Usman S, Chen M, Guo X.},
journal = {Microbiol Spectr},
year = {2024},
doi = {10.1128/spectrum.02516-23},
pmid = {38054628}
}
@article{lin386616,
title = {Microbial network and fermentation modulation of Napier grass and sugarcane top silage in southern Africa.},
author = {Du Z, Yamasaki S, Oya T, Nguluve D, Euridse D, Tinga B, Macome F, Cai Y.},
journal = {Microbiol Spectr},
year = {2024},
doi = {10.1128/spectrum.03032-23},
pmid = {38084975}
}
@article{lin386500,
title = {Dried Herbs as an Easy-to-Use and Cost-Effective Alternative to Essential Oils to Extend the Shelf Life of Sheep Lump Cheese.},
author = {Kunova S, Taglieri I, Hascik P, Ben Hsouna A, Mnif W, Venturi F, Sanmartin C, Cmikova N, Kluz MI, Kacaniova M.},
journal = {Foods},
year = {2023},
doi = {10.3390/foods12244487},
pmid = {38137291}
}
@article{lin386470,
title = {Update of the list of qualified presumption of safety (QPS) recommended microbiological agents intentionally added to food or feed as notified to EFSA 19: Suitability of taxonomic units notified to EFSA until September 2023.},
author = {EFSA Panel on Biological Hazards (BIOHAZ), Koutsoumanis K, Allende A, Alvarez-Ordonez A, Bolton D, Bover-Cid S, Chemaly M, De Cesare A, Hilbert F, Lindqvist R, Nauta M, Nonno R, Peixe L, Ru G, Simmons M, Skandamis P, Suffredini E, Cocconcelli PS, Fernandez Escamez PS, Prieto Maradona M, Querol A, Sijtsma L, Suarez JE, Sundh I, Barizzone F, Correia S, Herman L.},
journal = {EFSA J},
year = {2024},
doi = {10.2903/j.efsa.2024.8517},
pmid = {38213415}
}
@article{lin386664,
title = {Decarboxylase activity of the non-starter lactic acid bacterium Loigolactobacillus rennini gives crack defects in Gouda cheese through the production of gamma-aminobutyric acid.},
author = {Decadt H, Vermote L, Diaz-Munoz C, Weckx S, De Vuyst L.},
journal = {Appl Environ Microbiol},
year = {2024},
doi = {10.1128/aem.01655-23},
pmid = {38231565}
}
@article{lin107092,
title = {Production of a Bacteriocin Like Protein PEG 446 from Clostridium tyrobutyricum NRRL B-67062.},
author = {Liu S, Lu SY, Patel M, Qureshi N, Dunlap C, Hoecker E, Skory CD.},
journal = {Probiotics Antimicrob Proteins},
year = {2024},
doi = {10.1007/s12602-023-10211-1},
pmid = {38252201}
}
@article{lin386607,
title = {Production of biological hydrogen from Quinoa residue using dark fermentation and estimation of its microbial diversity.},
author = {Dursun N.},
journal = {Heliyon},
year = {2024},
doi = {10.1016/j.heliyon.2024.e25018},
pmid = {38314271}
}
@article{lin107088,
title = {Efficient production of butyric acid from lignocellulosic biomass by revealing the mechanisms of Clostridium tyrobutyricum tolerance to phenolic inhibitors.},
author = {Luo L, Wei H, Kong D, Wan L, Jiang Y, Qin S, Suo Y.},
journal = {Bioresour Technol},
year = {2024},
doi = {10.1016/j.biortech.2024.130427},
pmid = {38336212}
}
@article{lin386521,
title = {Proteomics Parameters for Assessing Authenticity of Grated Grana Padano PDO Cheese: Results from a Three-Year Survey.},
author = {Pellegrino L, Rosi V, Sindaco M, D'Incecco P.},
journal = {Foods},
year = {2024},
doi = {10.3390/foods13030355},
pmid = {38338491}
}
@article{lin386505,
title = {Cracking spoilage in jar cream cheese: Introducing, modeling and preventing.},
author = {Yolmeh M, Jafari SM.},
journal = {Heliyon},
year = {2024},
doi = {10.1016/j.heliyon.2024.e25259},
pmid = {38352739}
}
@article{lin386458,
title = {Effects of Clostridium tyrobutyricum on Lipid Metabolism, Intestinal Barrier Function, and Gut Microbiota in Obese Mice Induced by High-Fat Diet.},
author = {Luo Y, Jin Y, Wang H, Wang G, Lin Y, Chen H, Li X, Wang M.},
journal = {Nutrients},
year = {2024},
doi = {10.3390/nu16040493},
pmid = {38398817}
}
@article{lin386770,
title = {Resistant starch intake facilitates weight loss in humans by reshaping the gut microbiota.},
author = {Li H, Zhang L, Li J, Wu Q, Qian L, He J, Ni Y, Kovatcheva-Datchary P, Yuan R, Liu S, Shen L, Zhang M, Sheng B, Li P, Kang K, Wu L, Fang Q, Long X, Wang X, Li Y, Ye Y, Ye J, Bao Y, Zhao Y, Xu G, Liu X, Panagiotou G, Xu A, Jia W.},
journal = {Nat Metab},
year = {2024},
doi = {10.1038/s42255-024-00988-y},
pmid = {38409604}
}
@article{lin107077,
title = {Clostridium strain FAM25158, a unique endospore-forming bacterium related to Clostridium tyrobutyricum and isolated from Emmental cheese shows low tolerance to salt.},
author = {Princic L, Burtscher J, Sacken P, Krajnc T, Domig KJ.},
journal = {Front Microbiol},
year = {2024},
doi = {10.3389/fmicb.2024.1353321},
pmid = {38414773}
}
@article{lin107133,
title = {Engineering circular bacteriocins: structural and functional effects of alpha-helix exchanges and disulfide introductions in circularin A.},
author = {Liu F, van Heel AJ, Kuipers OP.},
journal = {Front Microbiol},
year = {2024},
doi = {10.3389/fmicb.2024.1337647},
pmid = {38435696}
}
@article{lin386583,
title = {Short-chain fatty acids in breast milk and their relationship with the infant gut microbiota.},
author = {Xi M, Yan Y, Duan S, Li T, Szeto IM, Zhao A.},
journal = {Front Microbiol},
year = {2024},
doi = {10.3389/fmicb.2024.1356462},
pmid = {38440144}
}
@article{lin386429,
title = {Development of inducible promoters for regulating gene expression in Clostridium tyrobutyricum for biobutanol production.},
author = {Feng J, Wang Q, Qin Z, Guo X, Fu H, Yang ST, Wang J.},
journal = {Biotechnol Bioeng},
year = {2024},
doi = {10.1002/bit.28701},
pmid = {38548678}
}
@article{lin386831,
title = {Advanced Electroanalysis for Electrosynthesis.},
author = {Brachi M, El Housseini W, Beaver K, Jadhav R, Dantanarayana A, Boucher DG, Minteer SD.},
journal = {ACS Org Inorg Au},
year = {2024},
doi = {10.1021/acsorginorgau.3c00051},
pmid = {38585515}
}
@article{lin386451,
title = {Metabolic and Bioprocess Engineering of Clostridium tyrobutyricum for Butyl Butyrate Production on Xylose and Shrimp Shell Waste.},
author = {Wang H, Chen Y, Yang Z, Deng H, Liu Y, Wei P, Zhu Z, Jiang L.},
journal = {Foods},
year = {2024},
doi = {10.3390/foods13071009},
pmid = {38611315}
}
@article{lin386738,
title = {One-pot production of butyl butyrate from glucose using a cognate "diamond-shaped" E. coli consortium.},
author = {Sinumvayo JP, Zhao C, Liu G, Li Y, Zhang Y.},
journal = {Bioresour Bioprocess},
year = {2021},
doi = {10.1186/s40643-021-00372-8},
pmid = {38650238}
}
@article{lin107098,
title = {Loureirin A is a narrow-spectrum antimicrobial agent against Helicobacter pylori.},
author = {Tong Q, Yin C, Hang X, Bai Y, Zhang C, Xu J, Huang Y, Ge Y, Chen T, Zeng L, Jia J, Bi H.},
journal = {Antimicrob Agents Chemother},
year = {2024},
doi = {10.1128/aac.00314-24},
pmid = {38656185}
}
@article{lin107078,
title = {Specificity of the AMP-6000 Method for Enumerating Clostridium Endospores in Milk.},
author = {Burtscher J, Rudavsky T, Zitz U, Domig KJ.},
journal = {Foods},
year = {2024},
doi = {10.3390/foods13081192},
pmid = {38672865}
}
@article{lin386587,
title = {Illuminating the Characteristics and Assembly of Prokaryotic Communities across a pH Gradient in Pit Muds for the Production of Chinese Strong-Flavor Baijiu.},
author = {Deng M, Hu X, Zhang Y, Zhang X, Ni H, Fu D, Chi L.},
journal = {Foods},
year = {2024},
doi = {10.3390/foods13081196},
pmid = {38672869}
}
@article{lin386456,
title = {Microbiome dysbiosis in patients with chronic endometritis and Clostridium tyrobutyricum ameliorates chronic endometritis in mice.},
author = {Liu J, Tang X, Chen L, Zhang Y, Gao J, Wang A.},
journal = {Sci Rep},
year = {2024},
doi = {10.1038/s41598-024-63382-4},
pmid = {38816643}
}
@article{lin386650,
title = {Cleaner anaerobic fermentation and greenhouse gas reduction of crop straw.},
author = {Du Z, Nakagawa A, Fang J, Ridwan R, Astuti WD, Sarwono KA, Sofyan A, Widyastuti Y, Cai Y.},
journal = {Microbiol Spectr},
year = {2024},
doi = {10.1128/spectrum.00520-24},
pmid = {38832787}
}
@article{lin386428,
title = {Integration of food raw materials, food microbiology, and food additives: systematic research and comprehensive insights into sweet sorghum juice, Clostridium tyrobutyricum TGL-A236 and bio-butyric acid.},
author = {Liu MH, Zhou X, Zhang MM, Wang YJ, Zhou B, Ding N, Wu QF, Lei CR, Dong ZY, Ren JL, Zhao JR, Jia CL, Liu J, Lu D, Zhong HY.},
journal = {Front Microbiol},
year = {2024},
doi = {10.3389/fmicb.2024.1410968},
pmid = {38873149}
}
@article{lin107090,
title = {Microbial cell factory for butyl butyrate production: Knowledges and perspectives.},
author = {Guo X, Ding Y, Chen Y, Fu H, Wang J.},
journal = {Microb Biotechnol},
year = {2024},
doi = {10.1111/1751-7915.14502},
pmid = {38888486}
}
@article{lin386442,
title = {Targeting the Gut-Kidney Axis in Diarrhea with Kidney-Yang Deficiency Syndrome: The Role of Sishen Pills in Regulating TMAO-Mediated Inflammatory Response.},
author = {Xie S, Fang L, Deng N, Shen J, Tan Z, Peng X.},
journal = {Med Sci Monit},
year = {2024},
doi = {10.12659/msm.944185},
pmid = {38898640}
}
@article{lin386484,
title = {Utilisation of Lactiplantibacillus plantarum and propionic acid to improve silage quality of amaranth before and after wilting: fermentation quality, microbial communities, and their metabolic pathway.},
author = {Zhao M, Bao J, Wang Z, Sun P, Liu J, Yan Y, Ge G.},
journal = {Front Microbiol},
year = {2024},
doi = {10.3389/fmicb.2024.1415290},
pmid = {38903783}
}
@article{lin386694,
title = {Chitosan alleviates symptoms of Parkinson's disease by reducing acetate levels, which decreases inflammation and promotes repair of the intestinal barrier and blood-brain barrier.},
author = {Wang Y, Chen R, Shi G, Huang X, Li K, Wang R, Cao X, Yang Z, Zhao N, Yan J.},
journal = {Neural Regen Res},
year = {2026},
doi = {10.4103/nrr.nrr-d-23-01511},
pmid = {38934394}
}
@article{lin386426,
title = {Targeted microbial collaboration to enhance key flavor metabolites by inoculating Clostridium tyrobutyricum and Saccharomyces cerevisiae in the strong-flavor Baijiu simulated fermentation system.},
author = {Qiu F, Li W, Chen X, Du B, Li X, Sun B.},
journal = {Food Res Int},
year = {2024},
doi = {10.1016/j.foodres.2024.114647},
pmid = {38945586}
}
@article{lin386851,
title = {Characterization of a Ligilactobacillus salivarius Strain Isolated from a Cheese Seal Which Was Last Used in 1936.},
author = {Alba C, Arroyo R, Fernandez L, Narbad A, Rodriguez JM.},
journal = {Foods},
year = {2024},
doi = {10.3390/foods13132005},
pmid = {38998510}
}
@article{lin386658,
title = {Top-down and bottom-up microbiome engineering approaches to enable biomanufacturing from waste biomass.},
author = {Lyu X, Nuhu M, Candry P, Wolfanger J, Betenbaugh M, Saldivar A, Zuniga C, Wang Y, Shrestha S.},
journal = {J Ind Microbiol Biotechnol},
year = {2024},
doi = {10.1093/jimb/kuae025},
pmid = {39003244}
}
@article{lin386659,
title = {Enhancing recovery from gut microbiome dysbiosis and alleviating DSS-induced colitis in mice with a consortium of rare short-chain fatty acid-producing bacteria.},
author = {Ambat A, Antony L, Maji A, Ghimire S, Mattiello S, Kashyap PC, More S, Sebastian V, Scaria J.},
journal = {Gut Microbes},
year = {2024},
doi = {10.1080/19490976.2024.2382324},
pmid = {39069899}
}
@article{lin107104,
title = {Advances in stress-tolerance elements for microbial cell factories.},
author = {Kuang Z, Yan X, Yuan Y, Wang R, Zhu H, Wang Y, Li J, Ye J, Yue H, Yang X.},
journal = {Synth Syst Biotechnol},
year = {2024},
doi = {10.1016/j.synbio.2024.06.008},
pmid = {39072145}
}
@article{lin386628,
title = {Microbiome mapping in dairy industry reveals new species and genes for probiotic and bioprotective activities.},
author = {De Filippis F, Valentino V, Yap M, Cabrera-Rubio R, Barcenilla C, Carlino N, Cobo-Diaz JF, Quijada NM, Calvete-Torre I, Ruas-Madiedo P, Sabater C, Sequino G, Pasolli E, Wagner M, Margolles A, Segata N, Alvarez-Ordonez A, Cotter PD, Ercolini D.},
journal = {NPJ Biofilms Microbiomes},
year = {2024},
doi = {10.1038/s41522-024-00541-5},
pmid = {39095404}
}
@article{lin386425,
title = {Clostridium tyrobutyricum in Combination with Chito-oligosaccharides Modulate Inflammation and Gut Microbiota for Inflammatory Bowel Disease Treatment.},
author = {Liu Z, Bai P, Wang L, Zhu L, Zhu Z, Jiang L.},
journal = {J Agric Food Chem},
year = {2024},
doi = {10.1021/acs.jafc.4c03486},
pmid = {39099138}
}
@article{lin386579,
title = {Heterologous expression and purification of the phage lysin-like bacteriocin LysL from Lactococcus lactis LAC460.},
author = {Mokhtari S, Saris PEJ, Takala TM.},
journal = {FEMS Microbiol Lett},
year = {2024},
doi = {10.1093/femsle/fnae065},
pmid = {39153967}
}
@article{lin386449,
title = {Feedstock variability impacts the bioconversion of sugar and lignin streams derived from corn stover by Clostridium tyrobutyricum and engineered Pseudomonas putida.},
author = {Ruhl IA, Nelson RS, Katahira R, Kruger JS, Chen X, Haugen SJ, Ingraham MA, Woodworth SP, Alt H, Ramirez KJ, Peterson DJ, Ding L, Laible PD, Linger JG, Salvachua D.},
journal = {Microb Biotechnol},
year = {2024},
doi = {10.1111/1751-7915.70006},
pmid = {39235453}
}
@article{lin386533,
title = {Kinetic study of the thermal inactivation of Weizmannia coagulans during food thermal processing.},
author = {Peng S, Guo C, Zhang X, Bu X, Li X, Cui H, Duan Z.},
journal = {Heliyon},
year = {2024},
doi = {10.1016/j.heliyon.2024.e36977},
pmid = {39286079}
}
@article{lin386437,
title = {Multiplex-PCR Detection of Clostridium tyrobutyricum, Clostridium butyricum, and Clostridium sporogenes in Raw Milk for Cheesemaking.},
author = {Floris I, Martucci F, Romano A, Marello G, Ligotti C, Bianchi DM.},
journal = {Life (Basel)},
year = {2024},
doi = {10.3390/life14091093},
pmid = {39337877}
}
@article{lin386572,
title = {Multi-omics analysis reveals the core microbiome and biomarker for nutrition degradation in alfalfa silage fermentation.},
author = {Wang Y, Sun Y, Huang K, Gao Y, Lin Y, Yuan B, Wang X, Xu G, Nussio LG, Yang F, Ni K.},
journal = {mSystems},
year = {2024},
doi = {10.1128/msystems.00682-24},
pmid = {39440963}
}
@article{lin386612,
title = {Lactobacillus plantarum KAD protects against high-fat diet-induced hepatic complications in Swiss albino mice: Role of inflammation and gut integrity.},
author = {Ghosh S, Ghosh AJ, Islam R, Sarkar S, Saha T.},
journal = {PLoS One},
year = {2024},
doi = {10.1371/journal.pone.0313548},
pmid = {39531444}
}
@article{lin386499,
title = {Spore-Forming Clostridia in Raw Cow Milk from Northern Italy: A Trend Analysis over the Past 20 Years.},
author = {Guaita A, Gambi L, Baresi P, Paterlini F, Bolzoni G, Zanardi G, Daminelli P.},
journal = {Foods},
year = {2024},
doi = {10.3390/foods13223638},
pmid = {39594054}
}
@article{lin386643,
title = {CRISPR-Cas9-based genome-editing technologies in engineering bacteria for the production of plant-derived terpenoids.},
author = {Sun X, Zhang H, Jia Y, Li J, Jia M.},
journal = {Eng Microbiol},
year = {2024},
doi = {10.1016/j.engmic.2024.100154},
pmid = {39629108}
}
@article{lin386555,
title = {Co-ensiling pomegranate (Punica granatum L.) peels and molasses with berseem (Trifolium alexandrinum L.) alters fermentation quality, nutrient composition, ruminal fermentation and methane production in buffalo bulls in-vitro.},
author = {Ahmed MG, El-Zarkouny SZ, Al-Sagheer AA, Elwakeel EA.},
journal = {Trop Anim Health Prod},
year = {2025},
doi = {10.1007/s11250-024-04259-6},
pmid = {39779523}
}
@article{lin386488,
title = {Characterizing microbial diversity and metabolic pathways in yak milk and fermented yak milk based on metagenomics: A study from Ganzi Tibetan autonomous prefecture.},
author = {Zhang J, Jiao Y, Liu K, Situ W, Menghe B, Chen Y, Zha M.},
journal = {Food Chem X},
year = {2025},
doi = {10.1016/j.fochx.2025.102198},
pmid = {39906066}
}
@article{lin386610,
title = {Engineering the Marine Pseudoalteromonas haloplanktis TAC125 via the pMEGA Plasmid Targeted Curing Using PTasRNA Technology.},
author = {Severino A, Lauro C, Calvanese M, Riccardi C, Colarusso A, Fondi M, Parrilli E, Tutino ML.},
journal = {Microorganisms},
year = {2025},
doi = {10.3390/microorganisms13020324},
pmid = {40005691}
}
@article{lin386627,
title = {Exploring the microbiota-gut-brain axis: impact on brain structure and function.},
author = {Yassin LK, Nakhal MM, Alderei A, Almehairbi A, Mydeen AB, Akour A, Hamad MIK.},
journal = {Front Neuroanat},
year = {2025},
doi = {10.3389/fnana.2025.1504065},
pmid = {40012737}
}
@article{lin386508,
title = {Implementation of a Clostridium luticellarii genome-scale model for upgrading syngas fermentations.},
author = {Scott WT, Rockx S, Marien Q, Regueira A, Candry P, Ganigue R, Koehorst JJ, Schaap PJ.},
journal = {Comput Struct Biotechnol J},
year = {2025},
doi = {10.1016/j.csbj.2025.01.013},
pmid = {40046987}
}
@article{lin386530,
title = {Enhancing Bacillus cereus antibacterial ability through improved cofactor supply.},
author = {Xu Y, Wu J, Yuan T, Chen Z, Feng D, Yang P, Han L, Geng L, Hu J, Wang G.},
journal = {Microb Cell Fact},
year = {2025},
doi = {10.1186/s12934-025-02666-4},
pmid = {40050842}
}
@article{lin107136,
title = {Lower termite (Coptotermes heimi) gut fibrolytic bacterial consortium: Isolation, phylogenetic characterization, fibre degradation potential and in vitro digestibility.},
author = {Kumawat PK, Sarkar S, Kumar S, Sahoo A.},
journal = {PLoS One},
year = {2025},
doi = {10.1371/journal.pone.0318090},
pmid = {40063580}
}
@article{lin386424,
title = {Effect of Saccharomyces cerevisiae inoculation on the co-fermentation of Clostridium kluyveri and Clostridium tyrobutyricum: A strategy for controlling acidity and enhancing aroma in strong-flavor Baijiu.},
author = {Qiu F, Li W, Zhang Y, Li H, Chen X, Niu J, Li X, Sun B.},
journal = {Int J Food Microbiol},
year = {2025},
doi = {10.1016/j.ijfoodmicro.2025.111172},
pmid = {40139101}
}
@article{lin386489,
title = {Gut flora-derived succinate exacerbates Allergic Airway Inflammation by promoting protein succinylation.},
author = {Wang C, Yu X, Yu X, Xiao H, Song Y, Wang X, Zheng H, Chen K, An Y, Zhou Z, Guo X, Wang F.},
journal = {Redox Biol},
year = {2025},
doi = {10.1016/j.redox.2025.103623},
pmid = {40174477}
}
@article{lin386439,
title = {Metagenomic and physicochemical profiling reveal microbial functions in pit mud for Jiang-Nong Jianxiang Baijiu fermentation.},
author = {Cao L, Sun H, Xu Z, Xu X, Shi G, Zhang J, Liang C, Li T, Liu C, Wang M, Tian S, Li E.},
journal = {BMC Microbiol},
year = {2025},
doi = {10.1186/s12866-025-03884-x},
pmid = {40175903}
}
@article{lin107086,
title = {Enhanced tolerance of Clostridium tyrobutyricum to lignin-derived phenolic acids by overexpressing native reductases.},
author = {Wei H, Wang Y, Zeng Y, Yang N, Jiang Y, Suo Y.},
journal = {J Biotechnol},
year = {2025},
doi = {10.1016/j.jbiotec.2025.04.001},
pmid = {40185369}
}
@article{lin386422,
title = {Systems Metabolic Engineering of Clostridium tyrobutyricum for 1,3-Propanediol Production From Crude Glycerol.},
author = {Mo Y, Guo X, Lan Y, Wang J, Fu H.},
journal = {Biotechnol Bioeng},
year = {2025},
doi = {10.1002/bit.29010},
pmid = {40254891}
}
@article{lin386563,
title = {Hi-TARGET: a fast, efficient and versatile CRISPR type I-B genome editing tool for the thermophilic acetogen Thermoanaerobacter kivui.},
author = {Sitara A, Hocq R, Lu AJ, Pflugl S.},
journal = {Biotechnol Biofuels Bioprod},
year = {2025},
doi = {10.1186/s13068-025-02647-0},
pmid = {40307869}
}
@article{lin386570,
title = {Carboxylic Acid Concentration in Downstream Bioprocessing Using High-Pressure Reverse Osmosis.},
author = {Chen Y, Olcay H, Tan ECD, Woodworth SP, Miscall J, Aromolaran A, Saboe PO, Linger JG, Beckham GT.},
journal = {ACS Sustain Chem Eng},
year = {2025},
doi = {10.1021/acssuschemeng.4c10709},
pmid = {40313779}
}
@article{lin386560,
title = {Application of exogenous electron mediator in fermentation to enhance the production of value-added products.},
author = {Yu Y, Shi Z, Li W, Bian M, Cheng C, Xi Y, Yao S, Zeng X, Jia Y.},
journal = {Appl Environ Microbiol},
year = {2025},
doi = {10.1128/aem.00495-25},
pmid = {40353653}
}
@article{lin386420,
title = {Metabolic Engineering of Clostridium tyrobutyricum for High-Yield n-Butanol Production by Increasing Intracellular Reducing Equivalent with NADPH-Dependent 3-Hydroxybutyryl-CoA Dehydrogenase.},
author = {Feng J, Wang Q, Guo X, Hu J, Wang G, Lu L, Qin Z, Fu H, Wang J, Yang ST.},
journal = {ACS Synth Biol},
year = {2025},
doi = {10.1021/acssynbio.5c00218},
pmid = {40402005}
}
@article{lin386423,
title = {In-Silico Analysis and Engineering of an Aldehyde/Alcohol Dehydrogenase for Alternative Cofactor Utilization and Selective Butanol Production.},
author = {Moore CD, Wang Q, Wang G, Feng J, Qin Z, Yang ST.},
journal = {ACS Synth Biol},
year = {2025},
doi = {10.1021/acssynbio.5c00003},
pmid = {40542735}
}
@article{lin386539,
title = {A Systematic Review on Microbial Profiling Techniques in Goat Milk: Implications for Probiotics and Shelf-Life.},
author = {Monareng NJ, Ncube KT, van Rooi C, Modiba MC, Mtileni B.},
journal = {Int J Mol Sci},
year = {2025},
doi = {10.3390/ijms26125551},
pmid = {40565014}
}
@article{lin386486,
title = {Fermentation Characteristics, Nutrient Content, and Microbial Population of Silphium perfoliatum L. Silage Produced with Different Lactic Acid Bacteria Additives.},
author = {Jin Y, Yuan B, Li F, Du J, Yu M, Tang H, Zhang L, Wang P.},
journal = {Animals (Basel)},
year = {2025},
doi = {10.3390/ani15131955},
pmid = {40646854}
}
@article{lin386436,
title = {Analysis of the formation mechanism and regulation pathway of oat silage off-flavor based on microbial-metabolite interaction network.},
author = {Jiajie Z, Xiaochen D, Junfeng H, Mingjiu W, Gentu G.},
journal = {BMC Microbiol},
year = {2025},
doi = {10.1186/s12866-025-04166-2},
pmid = {40739180}
}
@article{lin386504,
title = {Composition and distribution characteristics of acetic acid-related bacteria during the fermentation process of strong-flavor baijiu.},
author = {Mandlaa M, Liu M, Ren G, Qu H, Wang H, Ma F, Zhang M, Guo J, Chen Z, Sun Z.},
journal = {Front Microbiol},
year = {2025},
doi = {10.3389/fmicb.2025.1603412},
pmid = {40746320}
}
@article{lin386518,
title = {Clostridium caseinilyticum sp. nov., a close relative of Clostridium tepidum and Clostridium sporogenes, isolated from spoiled cheese and silage.},
author = {Shani N, Zago M, Berthoud H, Marzohl D, Michellod E, Gindro K, Giraffa G, Arias-Roth E.},
journal = {Int J Syst Evol Microbiol},
year = {2025},
doi = {10.1099/ijsem.0.006875},
pmid = {40772834}
}
@article{lin386465,
title = {Exploring the aerobic stability, antioxidant and microbial community of Broussonetia papyrifera ensiled with ferulic acid esterase-producing Lactiplantibacillus plantarum in combination with cellulase and/or xylanase.},
author = {Long Y, Li M, Su Y, Yu Q, Rong Y, Xi Y, Sun H, Xie Y, Hao J, Chen C, Zheng Y, Yang F.},
journal = {BMC Microbiol},
year = {2025},
doi = {10.1186/s12866-025-04185-z},
pmid = {40847280}
}
@article{lin386537,
title = {Microbiome profiling of Grana Padano and Parmigiano Reggiano cheeses reveals cheese-specific biomarkers, psychobiotic potential, and bioprotective activities.},
author = {Valentino V, Magliulo R, Balivo A, Krysmann AM, Calvanese CM, Esposito A, Sequino G, Genovese A, Porcellato D, Ercolini D, De Filippis F.},
journal = {NPJ Biofilms Microbiomes},
year = {2025},
doi = {10.1038/s41522-025-00815-6},
pmid = {40858622}
}
@article{lin386452,
title = {Improved Antimicrobial Properties of White Wastewater Protein Hydrolysate Through Electrodialysis with an Ultrafiltration Membrane (EDUF).},
author = {Damen D, Thibodeau J, Gaaloul S, Labrie S, Hamoudi S, Bazinet L.},
journal = {Membranes (Basel)},
year = {2025},
doi = {10.3390/membranes15080238},
pmid = {40863599}
}
@article{lin107076,
title = {Integrated co-cultivation and subsequent esterification: Harnessing Saccharomyces cerevisiae and Clostridium tyrobutyricum for streamlined ester production.},
author = {Oehlenschlager K, Lorenz M, Schepp E, Di Nonno S, Holtmann D, Ulber R.},
journal = {Biotechnol Biofuels Bioprod},
year = {2025},
doi = {10.1186/s13068-025-02698-3},
pmid = {40890840}
}
@article{lin386419,
title = {Clostridium tyrobutyricum strains exhibit high genetic diversity and differ in their ability to cause late blowing defect in washed-curd cheese.},
author = {Trmcic A, Princic L, Pajor M, Kalenak AP, Reichler SJ, Orsi RH, Martin NH, Wiedmann M.},
journal = {J Dairy Sci},
year = {2025},
doi = {10.3168/jds.2025-26686},
pmid = {40912557}
}
@article{lin386519,
title = {Periodontitis associated with Porphyromonas gingivalis infection is a risk factor for infertility through uterine hypertrophy.},
author = {Kamei-Nagata C, Omori K, Sako H, Sakaida K, Nakayama MA, Ohara T, Mandai H, Kubota-Takamori M, Kiyama F, Ishii T, Hirai K, Ikeda A, Takeuchi-Hatanaka K, Shinoda-Ito Y, Tai-Tokuzen M, Sakamoto A, Kiyokawa M, Yamanishi T, Oda T, Takigawa M, Yamamoto T, Miyake T, Takashiba S.},
journal = {Sci Rep},
year = {2025},
doi = {10.1038/s41598-025-18992-x},
pmid = {41057450}
}
@article{lin386523,
title = {The study of the relationship between food additives and the childhood asthma based on metabolome analysis.},
author = {Chen M, Xu X, Jiang X, Hui J, Tao X, Bao Y, Cao S, Wu Q.},
journal = {Front Immunol},
year = {2025},
doi = {10.3389/fimmu.2025.1671022},
pmid = {41080544}
}
@article{lin386438,
title = {Biodiversity and identification of spore-forming bacteria in raw milk from Korean dairy farm environment using the culturomics approach.},
author = {Park WS, Yoo J, Mun D, Choi HW, Oh S, Ham JS, Kim Y.},
journal = {J Anim Sci Technol},
year = {2025},
doi = {10.5187/jast.2024.e59},
pmid = {41089365}
}
@article{lin386421,
title = {Mesophilic fermentation explorations for anaerobic carboxylates production from commercial bioplastic products: PHA-based cups & PLA-based lids.},
author = {Jin Y, van den Enden R, Castrikum E, de Leeuw KD, Strik DPBTB.},
journal = {Bioresour Technol},
year = {2026},
doi = {10.1016/j.biortech.2025.133512},
pmid = {41101655}
}
@article{lin386516,
title = {The effect of autochthonous caproic acid-producing consortia inoculation on the multi-dimensional prokaryotic succession of bottom pitmud used for the Chinese strong-flavor Baijiu fermentation.},
author = {Zhang H, Zhen L, Chang Q, Liu Y, Xu K, Wang X, Cui L, Wu Z, Xue Z.},
journal = {Curr Res Microb Sci},
year = {2025},
doi = {10.1016/j.crmicr.2025.100490},
pmid = {41158963}
}
@article{lin386433,
title = {Integrating in vitro digestion and peptidomics into novel food allergenicity assessment: A study on Clostridium tyrobutyricum biomass.},
author = {Fytsilis VD, Ji R, Reiding KR, Heck AJR, van Schooten FJ, de Boer A, Vrolijk MF.},
journal = {Curr Res Food Sci},
year = {2025},
doi = {10.1016/j.crfs.2025.101237},
pmid = {41312432}
}
@article{lin386418,
title = {Amberlite resin-mediated lactate removal from whey permeate enhances butanol production by Clostridium beijerinckii.},
author = {Duduyemi A, Okereke O, Ujor VC.},
journal = {Bioresour Technol},
year = {2025},
doi = {10.1016/j.biortech.2025.133727},
pmid = {41317925}
}