@article{lin29883,
title = {Aromatic-degrading Sphingomonas isolates from the deep subsurface.},
author = {Fredrickson JK, Balkwill DL, Drake GR, Romine MF, Ringelberg DB, White DC},
journal = {Appl Environ Microbiol},
year = {1995},
doi = {10.1128/aem.61.5.1917-1922.1995},
pmid = {7544095}
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@article{lin29882,
title = {Prolyl endopeptidase from Sphingomonas capsulata: isolation and characterization of the enzyme and nucleotide sequence of the gene.},
author = {Kabashima T, Fujii M, Meng Y, Ito K, Yoshimoto T},
journal = {Arch Biochem Biophys},
year = {1998},
doi = {10.1006/abbi.1998.0836},
pmid = {9750174}
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@article{lin406716,
title = {Proposal of the genus Sphingomonas sensu stricto and three new genera, Sphingobium, Novosphingobium and Sphingopyxis, on the basis of phylogenetic and chemotaxonomic analyses.},
author = {Takeuchi M, Hamana K, Hiraishi A.},
journal = {Int J Syst Evol Microbiol},
year = {2001},
doi = {10.1099/00207713-51-4-1405},
pmid = {11491340}
}
@article{lin239703,
title = {Implicating the glutathione-gated potassium efflux system as a cause of electrophile-induced activated sludge deflocculation.},
author = {Bott CB, Love NG.},
journal = {Appl Environ Microbiol},
year = {2004},
doi = {10.1128/aem.70.9.5569-5578.2004},
pmid = {15345445}
}
@article{lin239704,
title = {Influence of inorganic nitrogen management regime on the diversity of nitrite-oxidizing bacteria in agricultural grassland soils.},
author = {Freitag TE, Chang L, Clegg CD, Prosser JI.},
journal = {Appl Environ Microbiol},
year = {2005},
doi = {10.1128/aem.71.12.8323-8334.2005},
pmid = {16332819}
}
@article{lin239702,
title = {A new experimental approach for studying bacterial genomic island evolution identifies island genes with bacterial host-specific expression patterns.},
author = {Wilson JW, Nickerson CA.},
journal = {BMC Evol Biol},
year = {2006},
doi = {10.1186/1471-2148-6-2},
pmid = {16396675}
}
@article{lin239696,
title = {Design and evaluation of 16S rRNA sequence based oligonucleotide probes for the detection and quantification of Comamonas testosteroni in mixed microbial communities.},
author = {Bathe S, Hausner M.},
journal = {BMC Microbiol},
year = {2006},
doi = {10.1186/1471-2180-6-54},
pmid = {16772028}
}
@article{lin29881,
title = {Production and rheological characterization of biopolymer of Sphingomonas capsulata ATCC 14666 using conventional and industrial media.},
author = {Berwanger AL, Domingues NM, Vanzo LT, Di Luccio M, Treichel H, Padilha FF, Scamparini AR},
journal = {Appl Biochem Biotechnol},
year = {2006},
pmid = {16915702}
}
@article{lin406724,
title = {Molecular analysis of arsenate-reducing bacteria within Cambodian sediments following amendment with acetate.},
author = {Lear G, Song B, Gault AG, Polya DA, Lloyd JR.},
journal = {Appl Environ Microbiol},
year = {2007},
doi = {10.1128/aem.01654-06},
pmid = {17114326}
}
@article{lin406710,
title = {Characterization of two compatible small plasmids from Sphingobium yanoikuyae.},
author = {Ochou M, Saito M, Kurusu Y.},
journal = {Biosci Biotechnol Biochem},
year = {2008},
doi = {10.1271/bbb.70813},
pmid = {18391447}
}
@article{lin406718,
title = {Skim milk enhances the preservation of thawed -80 degrees C bacterial stocks.},
author = {Cody WL, Wilson JW, Hendrixson DR, McIver KS, Hagman KE, Ott CM, Nickerson CA, Schurr MJ.},
journal = {J Microbiol Methods},
year = {2008},
doi = {10.1016/j.mimet.2008.05.006},
pmid = {18573555}
}
@article{lin406725,
title = {Dipeptidyl aminopeptidase IV from Stenotrophomonas maltophilia exhibits activity against a substrate containing a 4-hydroxyproline residue.},
author = {Nakajima Y, Ito K, Toshima T, Egawa T, Zheng H, Oyama H, Wu YF, Takahashi E, Kyono K, Yoshimoto T.},
journal = {J Bacteriol},
year = {2008},
doi = {10.1128/jb.02010-07},
pmid = {18820015}
}
@article{lin406709,
title = {Characterization of polyhydroxyalkanoates (PHAs) biosynthesis by isolated Novosphingobium sp. THA_AIK7 using crude glycerol.},
author = {Teeka J, Imai T, Reungsang A, Cheng X, Yuliani E, Thiantanankul J, Poomipuk N, Yamaguchi J, Jeenanong A, Higuchi T, Yamamoto K, Sekine M.},
journal = {J Ind Microbiol Biotechnol},
year = {2012},
doi = {10.1007/s10295-012-1084-2},
pmid = {22286712}
}
@article{lin406721,
title = {Proposal for a method to estimate nutrient shock effects in bacteria.},
author = {Azevedo NF, Braganca SM, Simoes LC, Cerqueira L, Almeida C, Almeida C, Keevil CW, Vieira MJ.},
journal = {BMC Res Notes},
year = {2012},
doi = {10.1186/1756-0500-5-422},
pmid = {22873690}
}
@article{lin239698,
title = {Temporal changes in species interactions in simple aquatic bacterial communities.},
author = {Pekkonen M, Laakso JT.},
journal = {BMC Ecol},
year = {2012},
doi = {10.1186/1472-6785-12-18},
pmid = {22984961}
}
@article{lin406719,
title = {Three-Dimensional Molecular Modeling of a Diverse Range of SC Clan Serine Proteases.},
author = {Laskar A, Chatterjee A, Chatterjee S, Rodger EJ.},
journal = {Mol Biol Int},
year = {2012},
doi = {10.1155/2012/580965},
pmid = {23213528}
}
@article{lin239700,
title = {Exacerbation of invasive Candida albicans infection by commensal bacteria or a glycolipid through IFN-gamma produced in part by iNKT cells.},
author = {Tarumoto N, Kinjo Y, Kitano N, Sasai D, Ueno K, Okawara A, Izawa Y, Shinozaki M, Watarai H, Taniguchi M, Takeyama H, Maesaki S, Shibuya K, Miyazaki Y.},
journal = {J Infect Dis},
year = {2014},
doi = {10.1093/infdis/jit534},
pmid = {24096333}
}
@article{lin239697,
title = {Resource availability and competition shape the evolution of survival and growth ability in a bacterial community.},
author = {Pekkonen M, Ketola T, Laakso JT.},
journal = {PLoS One},
year = {2013},
doi = {10.1371/journal.pone.0076471},
pmid = {24098791}
}
@article{lin239699,
title = {The relative importance of competition and predation in environment characterized by resource pulses--an experimental test with a microbial community.},
author = {Hiltunen T, Laakso J.},
journal = {BMC Ecol},
year = {2013},
doi = {10.1186/1472-6785-13-29},
pmid = {24139511}
}
@article{lin406697,
title = {DNA regions responsible for maintenance of Shingobium plasmid pYAN-2.},
author = {Hayashi H, Kurusu Y.},
journal = {Microbes Environ},
year = {2014},
doi = {10.1264/jsme2.me13135},
pmid = {24441514}
}
@article{lin406723,
title = {Archaeal production of polyhydroxyalkanoate (PHA) co- and terpolyesters from biodiesel industry-derived by-products.},
author = {Hermann-Krauss C, Koller M, Muhr A, Fasl H, Stelzer F, Braunegg G.},
journal = {Archaea},
year = {2013},
doi = {10.1155/2013/129268},
pmid = {24453697}
}
@article{lin406722,
title = {Biocontrol of Phytophthora Blight and Anthracnose in Pepper by Sequentially Selected Antagonistic Rhizobacteria against Phytophthora capsici.},
author = {Sang MK, Shrestha A, Kim DY, Park K, Pak CH, Kim KD.},
journal = {Plant Pathol J},
year = {2013},
doi = {10.5423/ppj.oa.07.2012.0104},
pmid = {25288942}
}
@article{lin29880,
title = {Proposal of Novosphingobium rhizosphaerae sp. nov., isolated from the rhizosphere.},
author = {Kampfer P, Martin K, McInroy JA, Glaeser SP},
journal = {Int J Syst Evol Microbiol},
year = {2014},
doi = {10.1099/ijs.0.070375-0},
pmid = {25320143}
}
@article{lin29879,
title = {Novosphingobium marinum sp. nov., isolated from seawater.},
author = {Huo YY, You H, Li ZY, Wang CS, Xu XW},
journal = {Int J Syst Evol Microbiol},
year = {2014},
doi = {10.1099/ijs.0.070433-0},
pmid = {25424486}
}
@article{lin406717,
title = {Isolation and Characterisation of Endophytic Nitrogen Fixing Bacteria in Sugarcane.},
author = {Muangthong A, Youpensuk S, Rerkasem B.},
journal = {Trop Life Sci Res},
year = {2015},
pmid = {26868592}
}
@article{lin406714,
title = {Facilitation as Attenuating of Environmental Stress among Structured Microbial Populations.},
author = {Martins SC, Santaella ST, Martins CM, Martins RP.},
journal = {ScientificWorldJournal},
year = {2016},
doi = {10.1155/2016/5713939},
pmid = {26904719}
}
@article{lin29878,
title = {Description of Novosphingobiumflavum sp. nov., isolated from soil.},
author = {Nguyen TM, Myung SW, Jang H, Kim J},
journal = {Int J Syst Evol Microbiol},
year = {2016},
doi = {10.1099/ijsem.0.001242},
pmid = {27306976}
}
@article{lin29877,
title = {Novosphingobium pokkalii sp nov, a novel rhizosphere-associated bacterium with plant beneficial properties isolated from saline-tolerant pokkali rice.},
author = {Krishnan R, Menon RR, Likhitha, Busse HJ, Tanaka N, Krishnamurthi S, Rameshkumar N},
journal = {Res Microbiol},
year = {2016},
doi = {10.1016/j.resmic.2016.09.001},
pmid = {27639667}
}
@article{lin406708,
title = {Hydrosols of orange blossom (Citrus aurantium), and rose flower (Rosa damascena and Rosa centifolia) support the growth of a heterogeneous spoilage microbiota.},
author = {Labadie C, Ginies C, Guinebretiere MH, Renard CMGC, Cerutti C, Carlin F.},
journal = {Food Res Int},
year = {2015},
doi = {10.1016/j.foodres.2015.07.014},
pmid = {28455040}
}
@article{lin406703,
title = {A rapid and simple method for identifying bacterial polar lipid components in wet biomass.},
author = {Nguyen TM, Kim J.},
journal = {J Microbiol},
year = {2017},
doi = {10.1007/s12275-017-7092-1},
pmid = {28674971}
}
@article{lin406713,
title = {Adaptation to fluctuations in temperature by nine species of bacteria.},
author = {Saarinen K, Laakso J, Lindstrom L, Ketola T.},
journal = {Ecol Evol},
year = {2018},
doi = {10.1002/ece3.3823},
pmid = {29531704}
}
@article{lin239701,
title = {Identification and Characterization of Genes Required for 5-Hydroxyuridine Synthesis in Bacillus subtilis and Escherichia coli tRNA.},
author = {Lauhon CT.},
journal = {J Bacteriol},
year = {2019},
doi = {10.1128/jb.00433-19},
pmid = {31358606}
}
@article{lin406726,
title = {Analysis of 1,000+ Type-Strain Genomes Substantially Improves Taxonomic Classification of Alphaproteobacteria.},
author = {Hordt A, Lopez MG, Meier-Kolthoff JP, Schleuning M, Weinhold LM, Tindall BJ, Gronow S, Kyrpides NC, Woyke T, Goker M.},
journal = {Front Microbiol},
year = {2020},
doi = {10.3389/fmicb.2020.00468},
pmid = {32373076}
}
@article{lin239695,
title = {Characterization of vB_StuS_MMDA13, a Newly Discovered Bacteriophage Infecting the Agar-Degrading Species Sphingomonas turrisvirgatae.},
author = {Marmo P, Thaller MC, Di Lallo G, Henrici De Angelis L, Poerio N, De Santis F, Fraziano M, Migliore L, D'Andrea MM.},
journal = {Viruses},
year = {2020},
doi = {10.3390/v12080894},
pmid = {32824138}
}
@article{lin406720,
title = {Soleris®Enterobacteriaceae for the Detection of Enterobacteriaceae in Select Foods: AOAC Performance Tested MethodSM 121901.},
author = {Alles S, Roman B, Betts G, Jordan S, Everis L, Montei C, Biswas P, Mozola M, Donofrio R.},
journal = {J AOAC Int},
year = {2020},
doi = {10.1093/jaoacint/qsaa001},
pmid = {33241330}
}
@article{lin406705,
title = {Application of Next-Generation Sequencing for the Determination of the Bacterial Community in the Gut Contents of Brackish Copepod Species (Acartia hudsonica, Sinocalanus tenellus, and Pseudodiaptomus inopinus).},
author = {Chae YJ, Oh HJ, Chang KH, Kwak IS, Jo H.},
journal = {Animals (Basel)},
year = {2021},
doi = {10.3390/ani11020542},
pmid = {33669847}
}
@article{lin239705,
title = {Carotenoid Nostoxanthin Production by Sphingomonas sp. SG73 Isolated from Deep Sea Sediment.},
author = {Kikukawa H, Okaya T, Maoka T, Miyazaki M, Murofushi K, Kato T, Hirono-Hara Y, Katsumata M, Miyahara S, Hara KY.},
journal = {Mar Drugs},
year = {2021},
doi = {10.3390/md19050274},
pmid = {34068940}
}
@article{lin406715,
title = {Effects of Malic Acid and Sucrose on the Fermentation Parameters, CNCPS Nitrogen Fractions, and Bacterial Community of Moringa oleifera Leaves Silage.},
author = {Tian H, Wang Y, Liu Z, Hu Z, Guo Y, Deng M, Liu G, Sun B.},
journal = {Microorganisms},
year = {2021},
doi = {10.3390/microorganisms9102102},
pmid = {34683423}
}
@article{lin406712,
title = {Subgingival Microbiota and Cytokines Profile Changes in Patients with Periodontitis: A Pilot Study Comparing Healthy and Diseased Sites in the Same Oral Cavities.},
author = {Esparbes P, Legrand A, Bandiaky ON, Cheraud-Carpentier M, Martin H, Montassier E, Soueidan A.},
journal = {Microorganisms},
year = {2021},
doi = {10.3390/microorganisms9112364},
pmid = {34835489}
}
@article{lin406700,
title = {Investigation of milk microbiota of healthy and mastitic Sahiwal cattle.},
author = {Salman MM, Nawaz M, Yaqub T, Mushtaq MH.},
journal = {BMC Microbiol},
year = {2023},
doi = {10.1186/s12866-023-03051-0},
pmid = {37875803}
}
@article{lin406711,
title = {Agromyces chromiiresistens sp. nov., Novosphingobium album sp. nov., Sphingobium arseniciresistens sp. nov., Sphingomonas pollutisoli sp. nov., and Salinibacterium metalliresistens sp. nov.: five new members of Microbacteriaceae and Sphingomonadaceae from polluted soil.},
author = {Liu ZS, Wang KH, Cai M, Yang ML, Wang XK, Ma HL, Yuan YH, Wu LH, Li DF, Liu SJ.},
journal = {Front Microbiol},
year = {2023},
doi = {10.3389/fmicb.2023.1289110},
pmid = {38088973}
}
@article{lin406706,
title = {Assessing peri-implant bacterial community structure: the effect of microbiome sample collection method.},
author = {Anitua E, Murias-Freijo A, Tierno R, Tejero R, Alkhraisat MH.},
journal = {BMC Oral Health},
year = {2024},
doi = {10.1186/s12903-024-04675-y},
pmid = {39187802}
}
@article{lin406707,
title = {alpha/beta Hydrolases: Toward Unraveling Entangled Classification.},
author = {Ozhelvaci F, Steczkiewicz K.},
journal = {Proteins},
year = {2025},
doi = {10.1002/prot.26776},
pmid = {39623291}
}
@article{lin406704,
title = {Microbiota analysis of perimenopausal women experiencing recurrent vaginitis in conjunction with urinary tract infection.},
author = {Bi Y, Wang Y, Li W, Chen Y, Qin J, Zheng H.},
journal = {BMC Microbiol},
year = {2025},
doi = {10.1186/s12866-024-03709-3},
pmid = {39755613}
}
@article{lin406699,
title = {The antimicrobial activity of ETD151 defensin is dictated by the presence of glycosphingolipids in the targeted organisms.},
author = {Kharrat O, Yamaryo-Botte Y, Nasreddine R, Voisin S, Aumer T, Cammue BPA, Madinier JB, Knobloch T, Thevissen K, Nehme R, Aucagne V, Botte C, Bulet P, Landon C.},
journal = {Proc Natl Acad Sci U S A},
year = {2025},
doi = {10.1073/pnas.2415524122},
pmid = {39937853}
}
@article{lin406701,
title = {Elucidation of a bacterial pathway for catabolism of the beta-beta-linked dilignol pinoresinol.},
author = {Allemann MN, Lu F, Presley GN, Valentino HR, Bedgar DL, Costa MA, Moinuddin SGA, Azubuike CC, Vasileva DP, Klingeman DM, Hochanadel LH, Fisch AR, Sanders BC, Eltis LD, Giannone RJ, Davin LB, Lewis NG, Ralph J, Elkins JG, Michener JK.},
journal = {mBio},
year = {2025},
doi = {10.1128/mbio.02010-25},
pmid = {40990490}
}
@article{lin406698,
title = {Synthetic Protein-Assisted Co-Assembly of Zeolitic Imidazolate Framework-8 and Novosphingobium capsulatum for Enhanced Saline-Alkali Resistance of Wheat.},
author = {Zhao Z, Liu R, Yu J, Liu Y, Li M, Yu Q.},
journal = {Molecules},
year = {2025},
doi = {10.3390/molecules30183669},
pmid = {41011563}
}
@article{lin406702,
title = {Genetic tools for engineering Zymomonas mobilis, Cereibacter sphaeroides and Novosphingobium aromaticivorans to improve production of bioenergy compounds.},
author = {Mishra S, Kumar V, Misra J, K P A, Sah B, Lal PB.},
journal = {Microb Cell Fact},
year = {2025},
doi = {10.1186/s12934-025-02845-3},
pmid = {41239446}
}