    @article{lin308976,
    title   = {Complete genome sequence and comparative genomics of Shigella flexneri serotype 2a strain 2457T.},    
    author  = {Wei J, Goldberg MB, Burland V, Venkatesan MM, Deng W, Fournier G, Mayhew GF, Plunkett G, Rose DJ, Darling A, Mau B, Perna NT, Payne SM, Runyen-Janecky LJ, Zhou S, Schwartz DC, Blattner FR.},    
    journal = {Infect Immun},    
    year    = {2003},    
    doi     = {10.1128/iai.71.5.2775-2786.2003},    
    pmid    = {12704152}        
    }
    @article{lin308971,
    title   = {Construction of p16Slux, a novel vector for improved bioluminescent labeling of gram-negative bacteria.},    
    author  = {Riedel CU, Casey PG, Mulcahy H, O'Gara F, Gahan CG, Hill C.},    
    journal = {Appl Environ Microbiol},    
    year    = {2007},    
    doi     = {10.1128/aem.01394-07},    
    pmid    = {17766445}        
    }
    @article{lin308972,
    title   = {Selection and validation of a multilocus variable-number tandem-repeat analysis panel for typing Shigella spp.},    
    author  = {Gorge O, Lopez S, Hilaire V, Lisanti O, Ramisse V, Vergnaud G.},    
    journal = {J Clin Microbiol},    
    year    = {2008},    
    doi     = {10.1128/jcm.02027-07},    
    pmid    = {18216214}        
    }
    @article{lin308973,
    title   = {Alternative hand contamination technique to compare the activities of antimicrobial and nonantimicrobial soaps under different test conditions.},    
    author  = {Fuls JL, Rodgers ND, Fischler GE, Howard JM, Patel M, Weidner PL, Duran MH.},    
    journal = {Appl Environ Microbiol},    
    year    = {2008},    
    doi     = {10.1128/aem.02405-07},    
    pmid    = {18441107}        
    }
    @article{lin308975,
    title   = {Application of isothermal helicase-dependent amplification with a disposable detection device in a simple sensitive stool test for toxigenic Clostridium difficile.},    
    author  = {Chow WH, McCloskey C, Tong Y, Hu L, You Q, Kelly CP, Kong H, Tang YW, Tang W.},    
    journal = {J Mol Diagn},    
    year    = {2008},    
    doi     = {10.2353/jmoldx.2008.080008},    
    pmid    = {18669881}        
    }
    @article{lin308977,
    title   = {Unc119 protects from Shigella infection by inhibiting the Abl family kinases.},    
    author  = {Vepachedu R, Karim Z, Patel O, Goplen N, Alam R.},    
    journal = {PLoS One},    
    year    = {2009},    
    doi     = {10.1371/journal.pone.0005211},    
    pmid    = {19381274}        
    }
    @article{lin308978,
    title   = {GO4genome: a prokaryotic phylogeny based on genome organization.},    
    author  = {Merkl R, Wiezer A.},    
    journal = {J Mol Evol},    
    year    = {2009},    
    doi     = {10.1007/s00239-009-9233-6},    
    pmid    = {19436929}        
    }
    @article{lin308970,
    title   = {Multilocus variable-number tandem repeat analysis for molecular typing and phylogenetic analysis of Shigella flexneri.},    
    author  = {Wang YW, Watanabe H, Phung DC, Tung SK, Lee YS, Terajima J, Liang SY, Chiou CS.},    
    journal = {BMC Microbiol},    
    year    = {2009},    
    doi     = {10.1186/1471-2180-9-278},    
    pmid    = {20042119}        
    }
    @article{lin308969,
    title   = {Roles of H2 uptake hydrogenases in Shigella flexneri acid tolerance.},    
    author  = {McNorton MM, Maier RJ.},    
    journal = {Microbiology (Reading)},    
    year    = {2012},    
    doi     = {10.1099/mic.0.058248-0},    
    pmid    = {22628482}        
    }
    @article{lin308979,
    title   = {Differential distribution of plasmid-mediated quinolone resistance genes in clinical enterobacteria with unusual phenotypes of quinolone susceptibility from Argentina.},    
    author  = {Andres P, Lucero C, Soler-Bistue A, Guerriero L, Albornoz E, Tran T, Zorreguieta A, PMQR Group, Galas M, Corso A, Tolmasky ME, Petroni A.},    
    journal = {Antimicrob Agents Chemother},    
    year    = {2013},    
    doi     = {10.1128/aac.01615-12},    
    pmid    = {23478955}        
    }
    @article{lin308974,
    title   = {Multiplex PCR for detection of the Vibrio genus and five pathogenic Vibrio species with primer sets designed using comparative genomics.},    
    author  = {Kim HJ, Ryu JO, Lee SY, Kim ES, Kim HY.},    
    journal = {BMC Microbiol},    
    year    = {2015},    
    doi     = {10.1186/s12866-015-0577-3},    
    pmid    = {26502878}        
    }
    @article{lin308964,
    title   = {Monoclonal Antibodies to Shigella Lipopolysaccharide Are Useful for Vaccine Production.},    
    author  = {Lin J, Smith MA, Benjamin WH, Kaminski RW, Wenzel H, Nahm MH.},    
    journal = {Clin Vaccine Immunol},    
    year    = {2016},    
    doi     = {10.1128/cvi.00148-16},    
    pmid    = {27280622}        
    }
    @article{lin308959,
    title   = {Estimating relative biomasses of organisms in microbiota using "phylopeptidomics".},    
    author  = {Pible O, Allain F, Jouffret V, Culotta K, Miotello G, Armengaud J.},    
    journal = {Microbiome},    
    year    = {2020},    
    doi     = {10.1186/s40168-020-00797-x},    
    pmid    = {32143687}        
    }
    @article{lin308966,
    title   = {<i>Chrysanthemum indicum</i> and <i>Chrysanthemum morifolium</i>: Chemical Composition of Their Essential Oils and Their Potential Use as Natural Preservatives with Antimicrobial and Antioxidant Activities.},    
    author  = {Youssef FS, Eid SY, Alshammari E, Ashour ML, Wink M, El-Readi MZ, El-Readi MZ.},    
    journal = {Foods},    
    year    = {2020},    
    doi     = {10.3390/foods9101460},    
    pmid    = {33066507}        
    }
    @article{lin308967,
    title   = {Efficient production of immunologically active Shigella invasion plasmid antigens IpaB and IpaH using a cell-free expression system.},    
    author  = {Kapoor N, Ndungo E, Pill L, Desalegn G, Berges A, Oaks EV, Fairman J, Pasetti MF.},    
    journal = {Appl Microbiol Biotechnol},    
    year    = {2022},    
    doi     = {10.1007/s00253-021-11701-4},    
    pmid    = {34932164}        
    }
    @article{lin308968,
    title   = {The repurposing of Tebipenem pivoxil as alternative therapy for severe gastrointestinal infections caused by extensively drug-resistant <i>Shigella</i> spp.},    
    author  = {Fernandez Alvaro E, Voong Vinh P, de Cozar C, Wille DR, Urones B, Cortes A, Price A, Tran Do Hoang N, Ha Thanh T, McCloskey M, Shaheen S, Dayao D, Martinot A, de Mercado J, Castaneda P, Garcia-Perez A, Singa B, Pavlinac P, Walson J, Martinez-Martinez MS, Arnold SLM, Tzipori S, Ballell Pages L, Baker S.},    
    journal = {Elife},    
    year    = {2022},    
    doi     = {10.7554/elife.69798},    
    pmid    = {35289746}        
    }
    @article{lin308965,
    title   = {The integrase of genomic island GI<i>sul2</i> mediates the mobilization of GI<i>sul2</i> and IS<i>CR</i>-related element CR2-<i>sul2</i> unit through site-specific recombination.},    
    author  = {Zhang G, Cui Q, Li J, Guo R, Leclercq SO, Du L, Tang N, Song Y, Wang C, Zhao F, Feng J.},    
    journal = {Front Microbiol},    
    year    = {2022},    
    doi     = {10.3389/fmicb.2022.905865},    
    pmid    = {35979485}        
    }
    @article{lin308963,
    title   = {Formate Metabolism in Shigella flexneri and Its Effect on HeLa Cells at Different Stages during the Infectious Process.},    
    author  = {Wang KC, Lerche MH, Ardenkjaer-Larsen JH, Jensen PR.},    
    journal = {Microbiol Spectr},    
    year    = {2023},    
    doi     = {10.1128/spectrum.00631-22},    
    pmid    = {37042762}        
    }
    @article{lin308961,
    title   = {Novel inhibitors that target bacterial virulence identified via HTS against intra-macrophage survival of <i>Shigella flexneri</i>.},    
    author  = {Miljkovic M, Lozano S, Castellote I, de Cozar C, Villegas-Moreno AI, Gamallo P, Jimenez-Alfaro Martinez D, Fernandez-Alvaro E, Ballell L, Garcia GA.},    
    journal = {mSphere},    
    year    = {2023},    
    doi     = {10.1128/msphere.00154-23},    
    pmid    = {37565760}        
    }
    @article{lin308960,
    title   = {Multidimensional third-generation sequencing of modified DNA bases allows interrogation of complex biological systems.},    
    author  = {David SS, Pacheco BA, Kishimoto K, Vantine S, Hu K, Liu H, Davis DL, Tran H, Sallis BF, Ali L, Haynes CM, McCormick BA, Zhu LJ, Flavahan WA.},    
    journal = {Nat Commun},    
    year    = {2025},    
    doi     = {10.1038/s41467-025-60896-x},    
    pmid    = {40593667}        
    }
    @article{lin308962,
    title   = {Phylogenomics, evolution and origin of multidrug-resistant <i>Acinetobacter baumannii</i> ST15.},    
    author  = {Abu Sabah E, Tobin LA, Lebreton F, McGann PT, Hamidian M.},    
    journal = {Microb Genom},    
    year    = {2025},    
    doi     = {10.1099/mgen.0.001450},    
    pmid    = {40673430}        
    }
