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title = {Modeling growth and succinoglucan production by Agrobacterium radiobacter NCIB 9042 in batch cultures.},
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title = {Nodulation of Sesbania species by Rhizobium (Agrobacterium) strain IRBG74 and other rhizobia.},
author = {Cummings SP, Gyaneshwar P, Vinuesa P, Farruggia FT, Andrews M, Humphry D, Elliott GN, Nelson A, Orr C, Pettitt D, Shah GR, Santos SR, Krishnan HB, Odee D, Moreira FM, Sprent JI, Young JP, James EK.},
journal = {Environ Microbiol},
year = {2009},
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@article{lin28071,
title = {Rhizobium borbori sp. nov., aniline-degrading bacteria isolated from activated sludge.},
author = {Zhang GX, Ren SZ, Xu MY, Zeng GQ, Luo HD, Chen JL, Tan ZY, Sun GP},
journal = {Int J Syst Evol Microbiol},
year = {2010},
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@article{lin28070,
title = {Rhizobium rosettiformans sp. nov., isolated from a hexachlorocyclohexane dump site, and reclassification of Blastobacter aggregatus Hirsch and Muller 1986 as Rhizobium aggregatum comb. nov.},
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journal = {Int J Syst Evol Microbiol},
year = {2010},
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@article{lin28068,
title = {Rhizobium pusense sp. nov., isolated from the rhizosphere of chickpea (Cicer arietinum L.).},
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journal = {Int J Syst Evol Microbiol},
year = {2010},
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@article{lin28066,
title = {Rhizobium nepotum sp. nov. isolated from tumors on different plant species.},
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journal = {Syst Appl Microbiol},
year = {2012},
doi = {10.1016/j.syapm.2012.03.001},
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@article{lin28065,
title = {Genomic analysis of Agrobacterium radiobacter DSM 30147(T) and emended description of A. radiobacter (Beijerinck and van Delden 1902) Conn 1942 (Approved Lists 1980) emend. Sawada et al. 1993.},
author = {Zhang L, Li X, Zhang F, Wang G},
journal = {Stand Genomic Sci},
year = {2014},
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@article{lin234569,
title = {Differentiating Indigenous Soybean Bradyrhizobium and Rhizobium spp. of Indian Soils.},
author = {Ansari PG, Rao DL.},
journal = {Indian J Microbiol},
year = {2014},
doi = {10.1007/s12088-013-0430-z},
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@article{lin28064,
title = {Agrobacterium deltaense sp. nov., an endophytic bacteria isolated from nodule of Sesbania cannabina.},
author = {Yan J, Li Y, Han XZ, Chen WF, Zou WX, Xie Z, Li M},
journal = {Arch Microbiol},
year = {2017},
doi = {10.1007/s00203-017-1367-0},
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@article{lin28063,
title = {Agrobacterium salinitolerans sp. nov., a saline-alkaline-tolerant bacterium isolated from root nodule of Sesbania cannabina.},
author = {Yan J, Li Y, Yan H, Chen WF, Zhang X, Wang ET, Han XZ, Xie ZH},
journal = {Int J Syst Evol Microbiol},
year = {2017},
doi = {10.1099/ijsem.0.001885},
pmid = {28629499}
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@article{lin28061,
title = {Improved genome of Agrobacterium radiobacter type strain provides new taxonomic insight into Agrobacterium genomospecies 4.},
author = {Gan HM, Lee MVL, Savka MA},
journal = {PeerJ},
year = {2019},
doi = {10.7717/peerj.6366},
pmid = {30775173}
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@article{lin234564,
title = {Bioremediation of a Common Product of Food Processing by a Human Gut Bacterium.},
author = {Wolf AR, Wesener DA, Cheng J, Houston-Ludlam AN, Beller ZW, Hibberd MC, Giannone RJ, Peters SL, Hettich RL, Leyn SA, Rodionov DA, Osterman AL, Gordon JI.},
journal = {Cell Host Microbe},
year = {2019},
doi = {10.1016/j.chom.2019.09.001},
pmid = {31585844}
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@article{lin28058,
title = {Isolation, Identification and Characterization of Endophytic Bacterium Rhizobium oryzihabitans sp. nov., from Rice Root with Biotechnological Potential in Agriculture.},
author = {Zhao J, Zhao X, Wang J, Gong Q, Zhang X, Zhang G},
journal = {Microorganisms},
year = {2020},
doi = {10.3390/microorganisms8040608},
pmid = {32331293}
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@article{lin28057,
title = {Strain ATCC 4720(T) is the authentic type strain of Agrobacterium tumefaciens, which is not a later heterotypic synonym of Agrobacterium radiobacter.},
author = {Velazquez E, Flores-Felix JD, Sanchez-Juanes F, Igual JM, Peix A},
journal = {Int J Syst Evol Microbiol},
year = {2020},
doi = {10.1099/ijsem.0.004443},
pmid = {32915125}
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@article{lin28056,
title = {Characterization and rheological properties analysis of the succinoglycan produced by a high-yield mutant of Rhizobium radiobacter ATCC 19358.},
author = {Gao H, Yang L, Tian J, Huang L, Huang D, Zhang W, Xie F, Niu Y, Jin M, Jia C, Zou C, Huang J, Chang Z, Yang X, Jiang D},
journal = {Int J Biol Macromol},
year = {2020},
doi = {10.1016/j.ijbiomac.2020.10.087},
pmid = {33096177}
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@article{lin234557,
title = {In silico analysis of the chemotactic system of Agrobacterium tumefaciens.},
author = {Xu N, Wang M, Yang X, Xu Y, Guo M.},
journal = {Microb Genom},
year = {2020},
doi = {10.1099/mgen.0.000460},
pmid = {33118922}
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@article{lin234559,
title = {The biofilm of Burkholderia cenocepacia H111 contains an exopolysaccharide composed of l-rhamnose and l-mannose: Structural characterization and molecular modelling.},
author = {Bellich B, Jou IA, Buriola C, Ravenscroft N, Brady JW, Fazli M, Tolker-Nielsen T, Rizzo R, Cescutti P.},
journal = {Carbohydr Res},
year = {2021},
doi = {10.1016/j.carres.2020.108231},
pmid = {33440288}
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@article{lin234563,
title = {Microbiota functional activity biosensors for characterizing nutrient metabolism in vivo.},
author = {Wesener DA, Beller ZW, Peters SL, Rajabi A, Dimartino G, Giannone RJ, Hettich RL, Gordon JI.},
journal = {Elife},
year = {2021},
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pmid = {33684031}
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@article{lin234561,
title = {Bifidobacterium infantis treatment promotes weight gain in Bangladeshi infants with severe acute malnutrition.},
author = {Barratt MJ, Nuzhat S, Ahsan K, Frese SA, Arzamasov AA, Sarker SA, Islam MM, Palit P, Islam MR, Hibberd MC, Hibberd MC, Nakshatri S, Cowardin CA, Guruge JL, Byrne AE, Venkatesh S, Sundaresan V, Henrick B, Duar RM, Mitchell RD, Casaburi G, Prambs J, Flannery R, Mahfuz M, Rodionov DA, Osterman AL, Kyle D, Ahmed T, Gordon JI.},
journal = {Sci Transl Med},
year = {2022},
doi = {10.1126/scitranslmed.abk1107},
pmid = {35417188}
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@article{lin234565,
title = {Products of gut microbial Toll/interleukin-1 receptor domain NADase activities in gnotobiotic mice and Bangladeshi children with malnutrition.},
author = {Weagley JS, Zaydman M, Venkatesh S, Sasaki Y, Damaraju N, Yenkin A, Buchser W, Rodionov DA, Osterman A, Ahmed T, Barratt MJ, DiAntonio A, Milbrandt J, Gordon JI.},
journal = {Cell Rep},
year = {2022},
doi = {10.1016/j.celrep.2022.110738},
pmid = {35476981}
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@article{lin234558,
title = {Microbial liberation of N-methylserotonin from orange fiber in gnotobiotic mice and humans.},
author = {Han ND, Cheng J, Delannoy-Bruno O, Webber D, Terrapon N, Henrissat B, Rodionov DA, Arzamasov AA, Osterman AL, Hayashi DK, Meynier A, Vinoy S, Desai C, Marion S, Barratt MJ, Heath AC, Gordon JI.},
journal = {Cell},
year = {2022},
doi = {10.1016/j.cell.2022.06.004},
pmid = {35764090}
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@article{lin234556,
title = {Reliability of species detection in 16S microbiome analysis: Comparison of five widely used pipelines and recommendations for a more standardized approach.},
author = {Hiergeist A, Ruelle J, Emler S, Gessner A.},
journal = {PLoS One},
year = {2023},
doi = {10.1371/journal.pone.0280870},
pmid = {36795699}
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@article{lin357705,
title = {Draft Genome Sequence of Agrobacterium radiobacter Strain MD22b, Isolated from a Grape Plant in Tajikistan.},
author = {Dzhuraeva M, Bobodzhanova K, Javier-Lopez R, Tediashvili M, Jaiani E, Birkeland NK.},
journal = {Microbiol Resour Announc},
year = {2023},
doi = {10.1128/mra.01131-22},
pmid = {36939329}
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@article{lin234562,
title = {Prevotella copri and microbiota members mediate the beneficial effects of a therapeutic food for malnutrition.},
author = {Chang HW, Lee EM, Wang Y, Zhou C, Pruss KM, Henrissat S, Chen RY, Kao C, Hibberd MC, Lynn HM, Webber DM, Crane M, Cheng J, Rodionov DA, Arzamasov AA, Castillo JJ, Couture G, Chen Y, Balcazo NP, Lebrilla CB, Terrapon N, Henrissat B, Ilkayeva O, Muehlbauer MJ, Newgard CB, Mostafa I, Das S, Mahfuz M, Osterman AL, Barratt MJ, Ahmed T, Gordon JI.},
journal = {Nat Microbiol},
year = {2024},
doi = {10.1038/s41564-024-01628-7},
pmid = {38503977}
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@article{lin234554,
title = {Exploring gingerol glucosides with enhanced anti-inflammatory activity through a newly identified alpha-glucosidase (ArG) from Agrobacterium radiobacter DSM 30147.},
author = {Chang TS, Wu JY, Ding HY, Lin HY, Wang TY.},
journal = {J Biosci Bioeng},
year = {2024},
doi = {10.1016/j.jbiosc.2024.06.004},
pmid = {38997871}
}
@article{lin234576,
title = {Draft genome sequence of Agrobacterium pusense strain CMT1: A promising growth-promoting bacterium isolated from nodules of soybean (Glycine max L. Merrill) crops for the One Health approach in Paraguay.},
author = {Samudio Oggero A, Valdez Borda M, Felix Pablos CM, Leguizamon G, Morinigo FM, Gonzalez Caballero V, Farias A, Nakayama H, de Los Santos Villalobos S.},
journal = {Curr Res Microb Sci},
year = {2024},
doi = {10.1016/j.crmicr.2024.100259},
pmid = {39076833}
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@article{lin234560,
title = {In vivo manipulation of human gut Bacteroides fitness by abiotic oligosaccharides.},
author = {Wesener DA, Beller ZW, Hill MF, Yuan H, Belanger DB, Frankfater C, Terrapon N, Henrissat B, Rodionov DA, Leyn SA, Osterman A, van Hylckama Vlieg JET, Gordon JI.},
journal = {Nat Chem Biol},
year = {2025},
doi = {10.1038/s41589-024-01763-6},
pmid = {39443715}
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@article{lin234555,
title = {Enzymatic Glycosylation of Ganoderma Terpenoid via Bacterial Glycosyltransferases and Glycoside Hydrolases.},
author = {Chang TS, Wu JY, Ding HY, Wang TY.},
journal = {Biomolecules},
year = {2025},
doi = {10.3390/biom15050655},
pmid = {40427548}
}