Acidaminococcus fermentans VR4 is an anaerobe, mesophilic, Gram-negative human pathogen that was isolated from pig gut.
- coccus-shaped
- Gram-negative
- anaerobe
- human pathogen
- mesophilic
- 16S sequence
- Bacteria
- genome sequence
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Information on the name and the taxonomic classification.
Name and taxonomic classification
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Information on morphological and physiological properties
Morphology
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[Ref.: #66793] Caption: electron microscopic image [Ref.: #66793] Intellectual property rights: © HZI/Manfred Rohde
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Information on culture and growth conditions
Culture and growth conditions
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Information on physiology and metabolism
Physiology and metabolism
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Information on isolation source, the sampling and environmental conditions
Isolation, sampling and environmental information
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Information on possible application of the strain and its possible interaction with e.g. potential hosts
Safety information
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Information on genomic background e.g. entries in nucleic sequence databass
Sequence information
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Data predicted using genome information as a basis
Genome-based predictions
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Availability in culture collections
External links
References
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#9041 Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 20731 -
#20215 Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 ) -
#20218 Verslyppe, B., De Smet, W., De Baets, B., De Vos, P., Dawyndt P.: StrainInfo introduces electronic passports for microorganisms.. Syst Appl Microbiol. 37: 42 - 50 2014 ( DOI 10.1016/j.syapm.2013.11.002 , PubMed 24321274 ) -
#42016 ; Curators of the CIP; -
#45249 Culture Collection University of Gothenburg (CCUG) ; Curators of the CCUG; CCUG 9996 -
#66792 Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) . -
#66793 Mukherjee et al.: GEBA: 1,003 reference genomes of bacterial and archaeal isolates expand coverage of the tree of life. 35: 676 - 683 2017 ( DOI 10.1038/nbt.3886 , PubMed 28604660 ) -
#66794 Antje Chang, Lisa Jeske, Sandra Ulbrich, Julia Hofmann, Julia Koblitz, Ida Schomburg, Meina Neumann-Schaal, Dieter Jahn, Dietmar Schomburg: BRENDA, the ELIXIR core data resource in 2021: new developments and updates. Nucleic Acids Res. 49: D498 - D508 2020 ( DOI 10.1093/nar/gkaa1025 , PubMed 33211880 ) -
#68380 Automatically annotated from API rID32A . -
#68382 Automatically annotated from API zym . -
#69479 João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta . -
#69480 Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Predictions based on genome sequence made in the Diaspora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) . -
#69481 Xiao-Yin To, René Mreches, Martin Binder, Alice C. McHardy, Philipp C. Münch: Predictions based on the model GenomeNet Sporulation v. 1 . ( DOI 10.21203/rs.3.rs-2527258/v1 ) -
#69781 Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.: StrainInfo: A central database for resolving microbial strain identifiers . ( DOI 10.60712/SI-ID44705.1 ) -
#119306 Collection of Institut Pasteur ; Curators of the CIP; CIP 106432 - * These data were automatically processed and therefore are not curated
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