Mycoplasmopsis mucosicanis 1642 is an aerobe, coccus-shaped bacterium that was isolated from genital mucosa of male dog .
coccus-shaped aerobe genome sequence 16S sequence Bacteria| @ref 20215 |
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| Domain Bacteria |
| Phylum Mycoplasmatota |
| Class Mollicutes |
| Order Mycoplasmoidales |
| Family Metamycoplasmataceae |
| Genus Mycoplasmopsis |
| Species Mycoplasmopsis mucosicanis |
| Full scientific name Mycoplasmopsis mucosicanis (Spergser et al. 2011) Gupta et al. 2018 |
| Synonyms (1) |
| @ref | Name | Growth | Medium link | Composition | |
|---|---|---|---|---|---|
| 16350 | SP4-Z MEDIUM (DSMZ Medium 1076b) | Medium recipe at MediaDive | Name: SP4-Z MEDIUM (DSMZ Medium 1076b) Composition: Agar 10.0 g/l Tryptone 10.0 g/l Bacto peptone 5.0 g/l PPLO broth 3.5 g/l Urea 2.0 g/l Glucose 1.0 g/l None 1.0 g/l Yeast extract 0.4 g/l DNA 0.2 g/l CMRL 1066 Fetal bovine serum Swine serum Distilled water |
| @ref | pathway | enzyme coverage | annotated reactions | external links | |
|---|---|---|---|---|---|
| 66794 | CDP-diacylglycerol biosynthesis | 100 | 2 of 2 | ||
| 66794 | acetoin degradation | 66.67 | 2 of 3 | ||
| 66794 | L-lactaldehyde degradation | 66.67 | 2 of 3 | ||
| 66794 | formaldehyde oxidation | 66.67 | 2 of 3 | ||
| 66794 | glycolysis | 52.94 | 9 of 17 | ||
| 66794 | ethanol fermentation | 50 | 1 of 2 | ||
| 66794 | acetate fermentation | 50 | 2 of 4 | ||
| 66794 | sulfopterin metabolism | 50 | 2 of 4 | ||
| 66794 | glycogen biosynthesis | 50 | 2 of 4 | ||
| 66794 | aspartate and asparagine metabolism | 44.44 | 4 of 9 | ||
| 66794 | NAD metabolism | 44.44 | 8 of 18 | ||
| 66794 | d-mannose degradation | 44.44 | 4 of 9 | ||
| 66794 | propanol degradation | 42.86 | 3 of 7 | ||
| 66794 | cardiolipin biosynthesis | 42.86 | 3 of 7 | ||
| 66794 | photosynthesis | 42.86 | 6 of 14 | ||
| 66794 | purine metabolism | 40.43 | 38 of 94 | ||
| 66794 | lipoate biosynthesis | 40 | 2 of 5 | ||
| 66794 | degradation of sugar alcohols | 37.5 | 6 of 16 | ||
| 66794 | 6-hydroxymethyl-dihydropterin diphosphate biosynthesis | 37.5 | 3 of 8 | ||
| 66794 | pyrimidine metabolism | 35.56 | 16 of 45 | ||
| 66794 | oxidative phosphorylation | 35.16 | 32 of 91 | ||
| 66794 | octane oxidation | 33.33 | 1 of 3 | ||
| 66794 | serine metabolism | 33.33 | 3 of 9 | ||
| 66794 | UDP-GlcNAc biosynthesis | 33.33 | 1 of 3 | ||
| 66794 | selenocysteine biosynthesis | 33.33 | 2 of 6 | ||
| 66794 | acetyl CoA biosynthesis | 33.33 | 1 of 3 | ||
| 66794 | reductive acetyl coenzyme A pathway | 28.57 | 2 of 7 | ||
| 66794 | proline metabolism | 27.27 | 3 of 11 | ||
| 66794 | glutamate and glutamine metabolism | 25 | 7 of 28 | ||
| 66794 | coenzyme A metabolism | 25 | 1 of 4 | ||
| 66794 | butanoate fermentation | 25 | 1 of 4 | ||
| 66794 | cyclohexanol degradation | 25 | 1 of 4 | ||
| 66794 | lactate fermentation | 25 | 1 of 4 | ||
| 66794 | non-pathway related | 23.68 | 9 of 38 | ||
| 66794 | vitamin B1 metabolism | 23.08 | 3 of 13 | ||
| 66794 | methionine metabolism | 23.08 | 6 of 26 | ||
| 66794 | phenylalanine metabolism | 23.08 | 3 of 13 | ||
| 66794 | leucine metabolism | 23.08 | 3 of 13 | ||
| 66794 | lipid metabolism | 22.58 | 7 of 31 | ||
| 66794 | degradation of hexoses | 22.22 | 4 of 18 | ||
| 66794 | valine metabolism | 22.22 | 2 of 9 | ||
| 66794 | degradation of pentoses | 21.43 | 6 of 28 |
| Cat1 | Cat2 | Cat3 | |
|---|---|---|---|
| #Infection | #Patient | - | |
| #Host | #Mammals | #Canidae (Dog) | |
| #Host Body-Site | #Urogenital tract | - | |
| #Host | #Human | #Male |
| @ref | Sample type | Host species | Geographic location | Country | Country ISO 3 Code | Continent | |
|---|---|---|---|---|---|---|---|
| 16350 | genital mucosa of male dog (Canis lupus familiaris) | Canis lupus familiaris | Vienna | Austria | AUT | Europe |
Global distribution of 16S sequence AM774638 (>99% sequence identity) for Mycoplasma mucosicanis subclade from Microbeatlas ![]()
| @ref | Description | Assembly level | INSDC accession | BV-BRC accession | IMG accession | NCBI tax ID | Score | |
|---|---|---|---|---|---|---|---|---|
| 66792 | ASM654693v1 assembly for Mycoplasmopsis mucosicanis 1642 | contig | 458208 | 63.01 |
| @ref | Description | Accession | Length | Database | NCBI tax ID | |
|---|---|---|---|---|---|---|
| 16350 | Mycoplasma mucosicanis 16S rRNA gene, type strain 1642T | AM774638 | 1418 | 458208 |
| @ref | Trait | Model | Prediction | Confidence in % | In training data |
|---|---|---|---|---|---|
| 125439 | oxygen_tolerance | BacteriaNetⓘ | facultative anaerobe | 98.17 | no |
| 125439 | gram_stain | BacteriaNetⓘ | negative | 99.94 | no |
| 125439 | motility | BacteriaNetⓘ | yes | 47.74 | no |
| 125439 | spore_formation | BacteriaNetⓘ | no | 99.98 | no |
| @ref | Trait | Model | Prediction | Confidence in % | In training data |
|---|---|---|---|---|---|
| 125438 | gram-positive | gram-positiveⓘ | yes | 61.43 | no |
| 125438 | anaerobic | anaerobicⓘ | no | 85.57 | yes |
| 125438 | aerobic | aerobicⓘ | no | 82.96 | no |
| 125438 | spore-forming | spore-formingⓘ | no | 97.85 | no |
| 125438 | thermophilic | thermophileⓘ | no | 95.24 | yes |
| 125438 | flagellated | motile2+ⓘ | no | 95.89 | yes |
| Topic | Title | Authors | Journal | DOI | Year | |
|---|---|---|---|---|---|---|
| Phylogeny | Mycoplasma mucosicanis sp. nov., isolated from the mucosa of dogs. | Spergser J, Langer S, Muck S, Macher K, Szostak M, Rosengarten R, Busse HJ | Int J Syst Evol Microbiol | 10.1099/ijs.0.015750-0 | 2010 |
| #16350 | Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 22457 |
| #20215 | Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 ) |
| #25947 | IJSEM 716 2011 ( DOI 10.1099/ijs.0.015750-0 , PubMed 20418418 ) |
| #29552 | Barberan A, Caceres Velazquez H, Jones S, Fierer N.: Hiding in Plain Sight: Mining Bacterial Species Records for Phenotypic Trait Information. mSphere 2: 2017 ( DOI 10.1128/mSphere.00237-17 , PubMed 28776041 ) - originally annotated from #25947 |
| #66792 | Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) . |
| #66794 | Antje Chang, Lisa Jeske, Sandra Ulbrich, Julia Hofmann, Julia Koblitz, Ida Schomburg, Meina Neumann-Schaal, Dieter Jahn, Dietmar Schomburg: BRENDA, the ELIXIR core data resource in 2021: new developments and updates. Nucleic Acids Res. 49: D498 - D508 2020 ( DOI 10.1093/nar/gkaa1025 , PubMed 33211880 ) |
| #69479 | João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta . |
| #125438 | Julia Koblitz, Lorenz Christian Reimer, Rüdiger Pukall, Jörg Overmann: Predicting bacterial phenotypic traits through improved machine learning using high-quality, curated datasets. 2024 ( DOI 10.1101/2024.08.12.607695 ) |
| #125439 | Philipp Münch, René Mreches, Martin Binder, Hüseyin Anil Gündüz, Xiao-Yin To, Alice McHardy: deepG: Deep Learning for Genome Sequence Data. R package version 0.3.1 . |
| #126262 | A. Lissin, I. Schober, J. F. Witte, H. Lüken, A. Podstawka, J. Koblitz, B. Bunk, P. Dawyndt, P. Vandamme, P. de Vos, J. Overmann, L. C. Reimer: StrainInfo—the central database for linked microbial strain identifiers. ( DOI 10.1093/database/baaf059 ) |
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https://doi.org/10.13145/bacdive8628.20260601.11
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