Name: Mesomycoplasma lagogenitalium 12MS
Creator: BacDive
License: http://creativecommons.org/licenses/by-nc/4.0/

Strain identifier

BacDive ID: 8625

Type strain:

Species: Mesomycoplasma lagogenitalium

Strain Designation: 12MS

Culture col. no.: DSM 22062, ATCC 700289, CIP 105489

Strain history: CIP <- 1998, H. Kobayashi, National Inst. Animal Health, Ibaraki, Japan: strain 12MS

NCBI tax ID(s): 171286 (species)

SI-ID 46956

ATCC 700289, CIP 105489, DSM 22062

Section

Mesomycoplasma lagogenitalium 12MS is a mesophilic bacterium that was isolated from preputial smegma of Afghan pikas Ochotona rufescens rufescens.

mesophilic
16S sequence
Bacteria
genome sequence

Information on the name and the taxonomic classification. Name and taxonomic classification

	Last LPSN update	14-12-2023 (DD-MM-YYYY)
	Domain	"Bacteria"
	Phylum	*Mycoplasmatota*
	Class	*Mollicutes*
	Order	*Mycoplasmoidales*
	Family	*Metamycoplasmataceae*
	Genus	*Mesomycoplasma*
	Species	**Mesomycoplasma lagogenitalium**
	Full Scientific Name (LPSN)	Mesomycoplasma lagogenitalium (Kobayashi et al. 1997) Gupta et al. 2018

Synonym

Mycoplasma lagogenitalium

Information on culture and growth conditions Culture and growth conditions

[Ref.: #16049]

Culture medium

SP4-Z MEDIUM (DSMZ Medium 1076b)

[Ref.: #16049]

Culture medium growth

[Ref.: #16049]

Culture medium link

Medium recipe at MediaDive

[Ref.: #16049]

Culture medium composition

expand / minimize

[Ref.: #32730]

Culture medium

MEDIUM 88 - for Mycoplasma and Acholeplasma

[Ref.: #32730]

Culture medium growth

[Ref.: #32730]

Culture medium composition

expand / minimize

[Ref.: #120548]

Culture medium

CIP Medium 88

[Ref.: #120548]

Culture medium growth

[Ref.: #120548]

Culture medium link

Medium recipe provided by DSMZ

	Temperatures	Kind of temperature		Temperature
[Ref.: #16049]			growth	37 °C
[Ref.: #32730]			growth	37 °C

[Ref.: #16049]	Temperature range	mesophilic
[Ref.: #32730]	Temperature range	mesophilic

Information on isolation source, the sampling and environmental conditions Isolation, sampling and environmental information

[Ref.: #16049]	Sample type/isolated from	preputial smegma of Afghan pikas Ochotona rufescens rufescens
[Ref.: #16049]	Host species	Ochotona rufescens rufescens
[Ref.: #16049]	Country	Japan
[Ref.: #16049]	Country ISO 3 Code	JPN
[Ref.: #16049]	Continent	Asia

[Ref.: #120548]	Sample type/isolated from	Afghan pika, Ochotona rufescens rufescens
[Ref.: #120548]	Country	Japan
[Ref.: #120548]	Country ISO 3 Code	JPN
[Ref.: #120548]	Continent	Asia
[Ref.: #120548]	Isolation date	1991
* marker position based on {}

Isolation sources categories

#Host	#Mammals	#Rodentia (Other)
#Host Body-Site	#Urogenital tract	-
#Host Body Product	#Fluids	-

What are isolation sources categories?

[Ref.: #69479]

Global distribution of 16S sequence AF412983 (>99% sequence identity) for Mycoplasma lagogenitalium subclade from Microbeatlas

Aquatic Samples
Soil Samples	2
Animal Samples	97
Plant Samples
Total Samples	99

Information on possible application of the strain and its possible interaction with e.g. potential hosts Safety information

[Ref.: #16049]	Biosafety level	1	Risk group (German classification) According to TRBA 466
[Ref.: #120548]	Biosafety level	2	Risk group (French classification)

Information on genomic background e.g. entries in nucleic sequence databass Sequence information

16S Sequence information:

	Sequence accession description	Seq. accession number	Sequence length (bp)	Sequence database	Associated NCBI tax ID
[Ref.: #16049]	Mycoplasma lagogenitalium 16S ribosomal RNA gene, partial sequence	AF412983	1471	ENA	171286 tax ID
[Ref.: #20218]	Mycoplasma lagogenitalium strain ATCC 700289 16S ribosomal RNA gene, partial sequence; 16S-23S ribosomal RNA intergenic spacer, complete sequence; and 23S ribosomal RNA gene, partial sequence	AY785379	947	ENA	171286 tax ID	*

Genome sequence information:

	Sequence accession description	Seq. accession number	Assembly level	Sequence database	Associated NCBI tax ID
[Ref.: #66792]	Mesomycoplasma lagogenitalium 12MS	GCA_029854295	complete	GenBank	171286 tax ID	*

Data predicted using genome information as a basis Genome-based predictions

	Trait	Prediction	Confidence in %	In training data
	Predictions from Diaspora project based on: Mesomycoplasma lagogenitalium 12MS NCBI: GCA_029854295.1
[Ref.: #69480]	motile	no	93.354	no
[Ref.: #69480]	flagellated	no	96.551	no
[Ref.: #69480]	gram-positive	no	52.369	no
[Ref.: #69480]	anaerobic	no	93.865	no
[Ref.: #69480]	aerobic	no	92.263	no
[Ref.: #69480]	halophile	no	56.668	no
[Ref.: #69480]	spore-forming	no	97.914	no
[Ref.: #69480]	glucose-ferment	yes	81.698	no
[Ref.: #69480]	thermophile	no	96.43	yes
[Ref.: #69480]	glucose-util	yes	90.461	no

Availability in culture collections External links

[Ref.: #16049]

Culture collection no.

DSM 22062, ATCC 700289, CIP 105489

[Ref.: #78006]

SI-ID 46956

Literature:

Topic	Title	Authors	Journal	DOI	Year
Metabolism	Mycoplasma lagogenitalium sp. nov., from the preputial smegma of Afghan pikas (Ochotona rufescens rufescens).	Kobayashi H, Runge M, Schmidt R, Kubo M, Yamamoto K, Kirchhoff H	Int J Syst Bacteriol	10.1099/00207713-47-4-1208	1997	*

References

#16049

Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 22062

#20215

Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )

#20218

Verslyppe, B., De Smet, W., De Baets, B., De Vos, P., Dawyndt P.: StrainInfo introduces electronic passports for microorganisms.. Syst Appl Microbiol. 37: 42 - 50 2014 ( DOI 10.1016/j.syapm.2013.11.002 , PubMed 24321274 )

#32730 ; Curators of the CIP;

#66792

Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

#69479

João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta .

#69480

Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Predictions based on genome sequence made in the Diaspora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

#78006

Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.: StrainInfo: A central database for resolving microbial strain identifiers . ( DOI 10.60712/SI-ID46956.1 )

#120548 Collection of Institut Pasteur ; Curators of the CIP; CIP 105489
* These data were automatically processed and therefore are not curated

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