Mycoplasmopsis sturni UCMF is an aerobe animal pathogen that was isolated from Conjunctiva of European starling Sturnus vulgaris.
aerobe animal pathogen genome sequence 16S sequence Bacteria| @ref 20215 |
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| Domain Bacteria |
| Phylum Mycoplasmatota |
| Class Mollicutes |
| Order Mycoplasmoidales |
| Family Metamycoplasmataceae |
| Genus Mycoplasmopsis |
| Species Mycoplasmopsis sturni |
| Full scientific name Mycoplasmopsis sturni (Forsyth et al. 1996) Gupta et al. 2018 |
| Synonyms (1) |
| @ref | Name | Growth | Medium link | Composition | |
|---|---|---|---|---|---|
| 16108 | SP4-Z MEDIUM (DSMZ Medium 1076b) | Medium recipe at MediaDive | Name: SP4-Z MEDIUM (DSMZ Medium 1076b) Composition: Agar 10.0 g/l Tryptone 10.0 g/l Bacto peptone 5.0 g/l PPLO broth 3.5 g/l Urea 2.0 g/l Glucose 1.0 g/l None 1.0 g/l Yeast extract 0.4 g/l DNA 0.2 g/l CMRL 1066 Fetal bovine serum Swine serum Distilled water | ||
| 32853 | MEDIUM 79 - for Mycoplasma | Distilled water make up to (610.000 ml);Glucose (5.000 g);Peptone (5.300g);Tryptone (10.000 g);PPLO broth (0.500 g);Sterile supplement - M00265 (375.000 ml) | |||
| 123330 | CIP Medium 79 | Medium recipe at CIP |
| @ref | Sample type | Host species | Geographic location | Country | Country ISO 3 Code | Continent | Isolation date | |
|---|---|---|---|---|---|---|---|---|
| 16108 | Conjunctiva of European starling Sturnus vulgaris | Sturnus vulgaris | Connecticut | USA | USA | North America | ||
| 123330 | Conjunctiva of European starling, Sturnus vulgaris | Connecticut | United States of America | USA | North America | 1995 |
Global distribution of 16S sequence U22013 (>99% sequence identity) for Mycoplasma sturni subclade from Microbeatlas ![]()
| @ref | Description | Assembly level | INSDC accession | BV-BRC accession | IMG accession | NCBI tax ID | Score | |
|---|---|---|---|---|---|---|---|---|
| 66792 | Mycoplasma sturni DSM 22021 | contig | 1122249 | 79 | ||||
| 66792 | ASM70148v1 assembly for Mycoplasmopsis sturni DSM 22021 | scaffold | 1122249 | 76.64 |
| @ref | Description | Accession | Length | Database | NCBI tax ID | |
|---|---|---|---|---|---|---|
| 20218 | Mycoplasma sturni ATCC 51945 16S ribosomal RNA gene, partial sequence; 16S-23S ribosomal RNA intergenic spacer, complete sequence; and 23S ribosomal RNA gene, partial sequence | AY766090 | 905 | 39047 | ||
| 16108 | Mycoplasma sturnidae 16S rRNA gene, partial sequence | U22013 | 1426 | 39047 |
| 16108 | GC-content (mol%)31.0 |
| @ref | Trait | Model | Prediction | Confidence in % | In training data |
|---|---|---|---|---|---|
| 125439 | oxygen_tolerance | BacteriaNetⓘ | facultative anaerobe | 95.00 | no |
| 125439 | gram_stain | BacteriaNetⓘ | negative | 100.00 | no |
| 125439 | motility | BacteriaNetⓘ | yes | 59.30 | no |
| 125439 | spore_formation | BacteriaNetⓘ | no | 99.80 | no |
| @ref | Trait | Model | Prediction | Confidence in % | In training data |
|---|---|---|---|---|---|
| 125438 | gram-positive | gram-positiveⓘ | yes | 65.82 | no |
| 125438 | anaerobic | anaerobicⓘ | no | 82.47 | yes |
| 125438 | aerobic | aerobicⓘ | no | 83.86 | yes |
| 125438 | spore-forming | spore-formingⓘ | no | 98.38 | no |
| 125438 | thermophilic | thermophileⓘ | no | 96.20 | yes |
| 125438 | flagellated | motile2+ⓘ | no | 97.25 | no |
| Topic | Title | Authors | Journal | DOI | Year | |
|---|---|---|---|---|---|---|
| Phylogeny | Mycoplasma sturni sp. nov., from the conjunctiva of a European starling (Sturnus vulgaris). | Forsyth MH, Tully JG, Gorton TS, Hinckley L, Frasca S Jr, van Kruiningen HJ, Geary SJ | Int J Syst Bacteriol | 10.1099/00207713-46-3-716 | 1996 |
| #16108 | Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 22021 |
| #20215 | Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 ) |
| #20218 | Verslyppe, B., De Smet, W., De Baets, B., De Vos, P., Dawyndt P.: StrainInfo introduces electronic passports for microorganisms.. Syst Appl Microbiol. 37: 42 - 50 2014 ( DOI 10.1016/j.syapm.2013.11.002 , PubMed 24321274 ) |
| #32853 | ; Curators of the CIP; |
| #66792 | Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) . |
| #69479 | João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta . |
| #123330 | Collection of Institut Pasteur ; Curators of the CIP; CIP 105812 |
| #125438 | Julia Koblitz, Lorenz Christian Reimer, Rüdiger Pukall, Jörg Overmann: Predicting bacterial phenotypic traits through improved machine learning using high-quality, curated datasets. 2024 ( DOI 10.1101/2024.08.12.607695 ) |
| #125439 | Philipp Münch, René Mreches, Martin Binder, Hüseyin Anil Gündüz, Xiao-Yin To, Alice McHardy: deepG: Deep Learning for Genome Sequence Data. R package version 0.3.1 . |
| #126262 | A. Lissin, I. Schober, J. F. Witte, H. Lüken, A. Podstawka, J. Koblitz, B. Bunk, P. Dawyndt, P. Vandamme, P. de Vos, J. Overmann, L. C. Reimer: StrainInfo—the central database for linked microbial strain identifiers. ( DOI 10.1093/database/baaf059 ) |
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