Mycoplasma mycoides subsp. capri (DSM 22061, CCUG 23387, CIP 71.25)

Name: Mycoplasma mycoides subsp. capri (DSM 22061, CCUG 23387, CIP 71.25)
Creator: BacDive
License: http://creativecommons.org/licenses/by/4.0/

BacDive ID 8611

Type strain

Strain Designation PG3

Culture col. no. DSM 22061 CCUG 23387 CIP 71.25 NCTC 10137 PG3

NCBI tax ID(s) 40477

Special Collections DSMZ CCUG CIP

Links

Mycoplasma mycoides subsp. capri PG3 is a mesophilic animal pathogen that was isolated from goat, pleuropneumonia.

mesophilic animal pathogen genome sequence 16S sequence

Name and taxonomic classification

SI-ID 69416

CCUG 23387,NCTC 10137,CIP 71.25,DSM 22061

@ref 20215

Last LPSN update 2025-12-16 09:48:53

Domain Bacillati

Phylum Mycoplasmatota

Class Mollicutes

Order Mycoplasmatales

Family Mycoplasmataceae

Genus Mycoplasma

Species Mycoplasma mycoides subsp. capri

Full scientific name Mycoplasma mycoides subsp. capri (Edward 1953) Freundt 1955 (Approved Lists 1980)

Synonyms (1)

"Asterococcus mycoides subsp. capri"

Morphology

Cell morphology

@ref	Motility	Confidence	Gram stain
125438		96.763
125439		99.2	negative

Culture and growth conditions

Culture medium

@ref	Name	Growth	Composition	Medium link
33480	MEDIUM 88 - for Mycoplasma and Acholeplasma		Distilled water make up to (670.000 ml);PPLO broth (17.000 g);Sterile supplement - M00273 (210.000 ml);Yeast extract solution 25 % - M00263 (100.000 ml);0.1 % Phenol red - M00387 (20.000 ml)
121211	CIP Medium 88			Medium recipe at CIP

Culture temp

@ref	Growth	Type	Temperature (°C)	Range
33480	positive	growth	37	mesophilic

Physiology and metabolism

Oxygen tolerance

@ref	Oxygen tolerance	Confidence
125439	facultative anaerobe	99.6

Spore formation

@ref	Spore formation	Confidence
125438		95.849
125439		98.7

Isolation, sampling and environmental information

Isolation source categories

Cat1	Cat2	Cat3
#Infection	#Disease	-
#Host	#Mammals	#Caprinae (Sheep/Goat)
#Host Body-Site	#Oral cavity and airways	#Lung

Isolation

@ref	Sample type
16048	goat, pleuropneumonia
121211	Animal, Goat, pleuropneumonia

Taxonmaps

69479

Global distribution of 16S sequence U26036 (>99% sequence identity) for Mycoplasma from Microbeatlas

Aquatic Samples	107
Soil Samples	14
Animal Samples	4511
Plant Samples	14
Total Samples	4646

Interaction and safety

Risk assessment

@ref	Pathogenicity animal	Biosafety level	Biosafety level comment
16048		2	Risk group (German classification) According to TRBA 466
121211		2	Risk group (French classification) According to TRBA 466

Sequence information

Genome sequences

@ref	Description	Assembly level	INSDC accession	BV-BRC accession	IMG accession	NCBI tax ID	Score
66792	ASM1838970v1 assembly for Mycoplasma mycoides subsp. capri PG3	complete	GCA_018389705	40477.64		40477	97.73
66792	ASM33903v1 assembly for Mycoplasma mycoides subsp. capri PG3	scaffold	GCA_000339035	1188246.3	2551306424	1188246	73.68
66792	Version 1.0 assembly for Mycoplasma mycoides subsp. capri PG3	contig	GCA_000590435	1188246.5	2563367049	1188246	73.23

16S sequences

@ref	Description	Accession	Length	Database	NCBI tax ID
16048	Mycoplasma mycoides capri PG3 16S ribosomal RNA (rrnA) gene, partial sequence	U26036	1466		40477

Genome-based predictions

Predictions

Predictions from Deep Learning for Genome Sequence Data. R package version 0.3.1 based on: Mycoplasma mycoides subsp. capri PG3
NCBI: GCA_018389705

@ref	Trait	Model	Prediction	Confidence in %	In training data
125439	oxygen_tolerance	BacteriaNetⓘ	facultative anaerobe	99.60	no
125439	gram_stain	BacteriaNetⓘ	negative	99.20	no
125439	motility	BacteriaNetⓘ	yes	51.00	no
125439	spore_formation	BacteriaNetⓘ	no	98.70	no

Predictions from bacterial phenotypic traits through improved machine learning using high-quality, curated datasets based on: Mycoplasma mycoides subsp. capri PG3
NCBI: GCA_018389705.1

@ref	Trait	Model	Prediction	Confidence in %	In training data
125438	gram-positive	gram-positiveⓘ	yes	75.04	no
125438	anaerobic	anaerobicⓘ	no	81.60	no
125438	aerobic	aerobicⓘ	no	90.21	no
125438	spore-forming	spore-formingⓘ	no	95.85	no
125438	thermophilic	thermophileⓘ	no	93.91	no
125438	flagellated	motile2+ⓘ	no	96.76	no

Literature

Topic	Title	Authors	Journal	DOI	Year
	Multi-platform diagnostic strategy and biosecurity as basis of contagious agalactia control programs in endemic areas.	De la Fe C, Grau A, Minguez O, Sanchez A, Esquivel R, Corrales JC.	Ir Vet J	10.1186/s13620-025-00288-1	2025
Phylogeny	Identification and subtyping of clinically relevant human and ruminant mycoplasmas by use of matrix-assisted laser desorption ionization-time of flight mass spectrometry.	Pereyre S, Tardy F, Renaudin H, Cauvin E, Del Pra Netto Machado L, Tricot A, Benoit F, Treilles M, Bebear C.	J Clin Microbiol	10.1128/jcm.01573-13	2013
Phylogeny	Differentiation of Mycoplasma species by 16S ribosomal DNA PCR and denaturing gradient gel electrophoresis fingerprinting.	McAuliffe L, Ellis RJ, Ayling RD, Nicholas RA.	J Clin Microbiol	10.1128/jcm.41.10.4844-4847.2003	2003
Enzymology	Rapid detection of contagious bovine pleuropneumonia by a Mycoplasma mycoides subsp. mycoides SC capsular polysaccharide-specific antigen detection latex agglutination test.	March JB, Kerr K, Lema B.	Clin Diagn Lab Immunol	10.1128/cdli.10.2.233-240.2003	2003
Phylogeny	Suppression-subtractive hybridization as a strategy to identify taxon-specific sequences within the Mycoplasma mycoides Cluster: design and validation of an M. capricolum subsp. capricolum-specific PCR assay.	Maigre L, Citti C, Marenda M, Poumarat F, Tardy F.	J Clin Microbiol	10.1128/jcm.01617-07	2008

References

#16048	Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 22061
#20215	Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )
#33480	; Curators of the CIP;
#66792	Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .
#69479	João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta .
#121211	Collection of Institut Pasteur ; Curators of the CIP; CIP 71.25
#125438	Julia Koblitz, Lorenz Christian Reimer, Rüdiger Pukall, Jörg Overmann: Predicting bacterial phenotypic traits through improved machine learning using high-quality, curated datasets. 2024 ( DOI 10.1101/2024.08.12.607695 )
#125439	Philipp Münch, René Mreches, Martin Binder, Hüseyin Anil Gündüz, Xiao-Yin To, Alice McHardy: deepG: Deep Learning for Genome Sequence Data. R package version 0.3.1 .
#126262	A. Lissin, I. Schober, J. F. Witte, H. Lüken, A. Podstawka, J. Koblitz, B. Bunk, P. Dawyndt, P. Vandamme, P. de Vos, J. Overmann, L. C. Reimer: StrainInfo—the central database for linked microbial strain identifiers. ( DOI 10.1093/database/baaf059 )

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Mycoplasma mycoides subsp. capri (DSM 22061, CCUG 23387, CIP 71.25)

Name and taxonomic classification

Morphology

Cell morphology

Culture and growth conditions

Culture medium

Culture temp

Physiology and metabolism

Oxygen tolerance

Spore formation

Isolation, sampling and environmental information

Isolation source categories

Isolation

Taxonmaps

Interaction and safety

Risk assessment

Sequence information

Genome sequences

Genome browser: GCA_018389705

16S sequences

Genome-based predictions

Predictions

Literature

Literature

References

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