Acetobacter xylinus DSM 2325 is a bacterium that produces polysaccharides.
polysaccharide production genome sequence 16S sequence Bacteria| @ref 20215 |
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| Domain Bacteria |
| Phylum Pseudomonadota |
| Class Alphaproteobacteria |
| Order Rhodospirillales |
| Family Acetobacteraceae |
| Genus Acetobacter |
| Species Acetobacter xylinus |
| Full scientific name Acetobacter xylinus corrig. (Brown 1886) Yamada 1984 |
| Synonyms (8) |
| @ref | Name | Growth | Medium link | Composition | |
|---|---|---|---|---|---|
| 732 | GLUCONOBACTER OXYDANS MEDIUM (DSMZ Medium 105) | Medium recipe at MediaDive | Name: GLUCONOBACTER OXYDANS MEDIUM (DSMZ Medium 105) Composition: Glucose 100.0 g/l CaCO3 20.0 g/l Agar 15.0 g/l Yeast extract 10.0 g/l Distilled water | ||
| 732 | YPM MEDIUM (DSMZ Medium 360) | Medium recipe at MediaDive | Name: YPM MEDIUM (DSMZ Medium 360) Composition: Mannitol 25.0 g/l Agar 12.0 g/l Yeast extract 5.0 g/l Peptone 3.0 g/l Distilled water |
| @ref | Description | Assembly level | INSDC accession | BV-BRC accession | IMG accession | NCBI tax ID | Score | |
|---|---|---|---|---|---|---|---|---|
| 66792 | ASM400637v1 assembly for Komagataeibacter xylinus DSM 2325 | chromosome | 28448 | 86.89 |
| @ref | Description | Accession | Length | Database | NCBI tax ID | |
|---|---|---|---|---|---|---|
| 124043 | Gluconacetobacter xylinus strain LMG 1518 16S ribosomal RNA gene, partial sequence. | JF794014 | 1354 | 28448 |
| 732 | GC-content (mol%)58.4 |
| @ref | Trait | Model | Prediction | Confidence in % | In training data |
|---|---|---|---|---|---|
| 125439 | oxygen_tolerance | BacteriaNetⓘ | aerobe | 77.77 | no |
| 125439 | gram_stain | BacteriaNetⓘ | negative | 91.87 | no |
| 125439 | motility | BacteriaNetⓘ | yes | 63.89 | no |
| 125439 | spore_formation | BacteriaNetⓘ | no | 98.58 | no |
| @ref | Trait | Model | Prediction | Confidence in % | In training data |
|---|---|---|---|---|---|
| 125438 | gram-positive | gram-positiveⓘ | no | 97.33 | no |
| 125438 | anaerobic | anaerobicⓘ | no | 91.00 | no |
| 125438 | spore-forming | spore-formingⓘ | no | 91.06 | no |
| 125438 | aerobic | aerobicⓘ | yes | 78.23 | no |
| 125438 | thermophilic | thermophileⓘ | no | 98.07 | yes |
| 125438 | flagellated | motile2+ⓘ | no | 59.66 | no |
| Topic | Title | Authors | Journal | DOI | Year | |
|---|---|---|---|---|---|---|
| Phylogeny | Exploring the Acetobacteraceae family isolated from kombucha SCOBYs worldwide and comparing yield and characteristics of biocellulose under various fermentation conditions. | Khiabani A, Sarabi-Jamab M, Shakeri MS, Pahlevanlo A, Emadzadeh B. | Sci Rep | 10.1038/s41598-024-77305-w | 2024 | |
| Enzymology | Valorization of Apple Pomace: Production of Phloretin Using a Bacterial Cellulose-Immobilized beta-Glycosidase. | Colacicco A, Nespoli L, Ribul Moro E, Farris S, Molinari F, Romano D, Contente ML. | ChemSusChem | 10.1002/cssc.202500592 | 2025 | |
| Genetics | Complete genome analysis of the cellulose producing strain Komagataeibacter sucrofermentans SMEG01. | Deng S, Wang L, Chen G, Qin Q, Dong S, Zhang H. | Sci Rep | 10.1038/s41598-025-07045-y | 2025 | |
| Metabolism | Enhanced Production of Bacterial Cellulose in Komagataeibacter xylinus Via Tuning of Biosynthesis Genes with Synthetic RBS. | Hur DH, Choi WS, Kim TY, Lee SY, Park JH, Jeong KJ. | J Microbiol Biotechnol | 10.4014/jmb.2006.06026 | 2020 | |
| Enhanced production of bacterial cellulose with a mesh dispenser vessel-based bioreactor. | Loh J, Arnardottir T, Gilmour K, Zhang M, Dade-Robertson M. | Cellulose (Lond) | 10.1007/s10570-024-06367-w | 2025 | ||
| From Nature to Lab: Sustainable Bacterial Cellulose Production and Modification with Synthetic Biology. | Potocnik V, Gorgieva S, Trcek J. | Polymers (Basel) | 10.3390/polym15163466 | 2023 | ||
| Genetic modification for enhancing bacterial cellulose production and its applications. | Singhania RR, Patel AK, Tsai ML, Chen CW, Di Dong C. | Bioengineered | 10.1080/21655979.2021.1968989 | 2021 | ||
| Innovating fire safety with recombinant hydrophobic proteins for textile fire retardancy. | Gilmour KA, Arnadottir TH, James P, Scott J, Jiang Y, Dade-Robertson M, Zhang M. | Microb Biotechnol | 10.1111/1751-7915.14340 | 2023 | ||
| Valorising Whey: From Environmental Burden to Bio-Based Production of Value-Added Compounds and Food Ingredients. | Selmi H, Presutto E, Spano G, Capozzi V, Fragasso M. | Foods | 10.3390/foods14213646 | 2025 | ||
| Metabolism | From cheese whey permeate to Sakacin-A/bacterial cellulose nanocrystal conjugates for antimicrobial food packaging applications: a circular economy case study. | Rollini M, Musatti A, Cavicchioli D, Bussini D, Farris S, Rovera C, Romano D, De Benedetti S, Barbiroli A. | Sci Rep | 10.1038/s41598-020-78430-y | 2020 | |
| Bacterial nanocellulose: engineering, production, and applications. | R R, Philip E, Thomas D, Madhavan A, Sindhu R, Binod P, Varjani S, Awasthi MK, Pandey A. | Bioengineered | 10.1080/21655979.2021.2009753 | 2021 | ||
| A safe and sustainable bacterial cellulose nanofiber separator for lithium rechargeable batteries. | Gwon H, Park K, Chung SC, Kim RH, Kang JK, Ji SM, Kim NJ, Lee S, Ku JH, Do EC, Park S, Kim M, Shim WY, Rhee HS, Kim JY, Kim J, Kim TY, Yamaguchi Y, Iwamuro R, Saito S, Kim G, Jung IS, Park H, Lee C, Lee S, Jeon WS, Jang WD, Kim HU, Lee SY, Im D, Doo SG, Lee SY, Lee HC, Park JH. | Proc Natl Acad Sci U S A | 10.1073/pnas.1905527116 | 2019 | ||
| Metabolism | Molecular aspects of bacterial nanocellulose biosynthesis. | Jacek P, Dourado F, Gama M, Bielecki S. | Microb Biotechnol | 10.1111/1751-7915.13386 | 2019 | |
| Metabolism | Towards control of cellulose biosynthesis by Komagataeibacter using systems-level and strain engineering strategies: current progress and perspectives. | Ryngajllo M, Jedrzejczak-Krzepkowska M, Kubiak K, Ludwicka K, Bielecki S. | Appl Microbiol Biotechnol | 10.1007/s00253-020-10671-3 | 2020 | |
| Bacterial Cellulose as a UVB Filter to Protect the Skin Microbiota. | Alarcon-Guijo P, Garces V, Gonzalez A, Delgado-Lopez JM, Ullah R, Bansal V, Dominguez-Vera JM. | Macromol Biosci | 10.1002/mabi.202400269 | 2025 | ||
| Living Cellulose Materials with Tunable Viscoelasticity through Probiotic Proliferation. | Sabio L, Dominguez-Vera JM, de Vicente J, Delgado-Lopez JM. | ACS Appl Bio Mater | 10.1021/acsabm.2c00814 | 2023 | ||
| Metabolism | Comparison of productivity and quality of bacterial nanocellulose synthesized using culture media based on seven sugars from biomass. | Chen G, Wu G, Chen L, Wang W, Hong FF, Jonsson LJ. | Microb Biotechnol | 10.1111/1751-7915.13401 | 2019 | |
| Exogenous bacterial cellulose induces plant tissue regeneration through the regulation of cytokinin and defense networks. | Ruiz-Solani N, Alonso-Diaz A, Capellades M, Serrano-Ron L, Ferro-Costa M, Sanchez-Corrionero A, Rabissi A, Argueso CT, Rubio-Somoza I, Laromaine A, Moreno-Risueno MA, Coll NS. | Sci Adv | 10.1126/sciadv.adr1509 | 2025 | ||
| Cell-Laden 3D Hydrogels of Type I Collagen Incorporating Bacterial Nanocellulose Fibers. | Malandain N, Sanz-Fraile H, Farre R, Otero J, Roig A, Laromaine A. | ACS Appl Bio Mater | 10.1021/acsabm.3c00126 | 2023 | ||
| 3D-Printed Cellulose Aerogels Minimally Cross-Linked with Polyurea: A Robust Strategy for Tissue Engineering. | Iglesias-Mejuto A, Raptopoulos G, Malandain N, Neves Amaral M, Ardao I, Finsgar M, Laromaine A, Roig A, Pinto Reis C, Garcia-Gonzalez CA, Paraskevopoulou P. | ACS Appl Mater Interfaces | 10.1021/acsami.5c08389 | 2025 | ||
| Oil-in-Water Pickering Emulsions Stabilized with Nanostructured Biopolymers: A Venue for Templating Bacterial Cellulose. | Calvo V, Fuentes L, Berdejo D, Gonzalez-Dominguez JM, Maser WK, Benito AM. | Int J Mol Sci | 10.3390/ijms241713141 | 2023 | ||
| Highly Aligned Bacterial Nanocellulose Films Obtained During Static Biosynthesis in a Reproducible and Straightforward Approach. | Murugarren N, Roig-Sanchez S, Anton-Sales I, Malandain N, Xu K, Solano E, Reparaz JS, Laromaine A. | Adv Sci (Weinh) | 10.1002/advs.202201947 | 2022 | ||
| One-Step Biosynthesis of Soft Magnetic Bacterial Cellulose Spheres with Localized Nanoparticle Functionalization. | Roig-Sanchez S, Torrecilla O, Floriach-Clark J, Parets S, Levkin PA, Roig A, Laromaine A. | ACS Appl Mater Interfaces | 10.1021/acsami.1c17752 | 2021 | ||
| Conductive Bacterial Nanocellulose-Polypyrrole Patches Promote Cardiomyocyte Differentiation. | Srinivasan SY, Cler M, Zapata-Arteaga O, Dorling B, Campoy-Quiles M, Martinez E, Engel E, Perez-Amodio S, Laromaine A. | ACS Appl Bio Mater | 10.1021/acsabm.3c00303 | 2023 | ||
| Production efficiency and properties of bacterial cellulose membranes in a novel grape pomace hydrolysate by Komagataeibacter melomenusus AV436T and Komagataeibacter xylinus LMG 1518. | Gorgieva S, Jancic U, Cepec E, Trcek J. | Int J Biol Macromol | 10.1016/j.ijbiomac.2023.125368 | 2023 | ||
| Set-Up of Bacterial Cellulose Production From the Genus Komagataeibacter and Its Use in a Gluten-Free Bakery Product as a Case Study. | Vigentini I, Fabrizio V, Dellaca F, Rossi S, Azario I, Mondin C, Benaglia M, Foschino R. | Front Microbiol | 10.3389/fmicb.2019.01953 | 2019 | ||
| Bacterial Cellulose Properties Fulfilling Requirements for a Biomaterial of Choice in Reconstructive Surgery and Wound Healing. | Jankau J, Blazynska-Spychalska A, Kubiak K, Jedrzejczak-Krzepkowska M, Pankiewicz T, Ludwicka K, Dettlaff A, Peksa R. | Front Bioeng Biotechnol | 10.3389/fbioe.2021.805053 | 2021 | ||
| Probiotic-Loaded Bacterial Cellulose as an Alternative to Combat Carbapenem-Resistant Bacterial Infections. | Gutierrez-Fernandez J, Cerezo-Collado L, Garces V, Alarcon-Guijo P, Delgado-Lopez JM, Dominguez-Vera JM. | Antibiotics (Basel) | 10.3390/antibiotics13111003 | 2024 | ||
| Phylogeny | Differentiation of species of the family Acetobacteraceae by AFLP DNA fingerprinting: Gluconacetobacter kombuchae is a later heterotypic synonym of Gluconacetobacter hansenii. | Cleenwerck I, De Wachter M, Gonzalez A, De Vuyst L, De Vos P | Int J Syst Evol Microbiol | 10.1099/ijs.0.005157-0 | 2009 | |
| Genetics | Genomic and metabolic analysis of Komagataeibacter xylinus DSM 2325 producing bacterial cellulose nanofiber. | Jang WD, Kim TY, Kim HU, Shim WY, Ryu JY, Park JH, Lee SY | Biotechnol Bioeng | 10.1002/bit.27150 | 2019 |
| #732 | Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 2325 |
| #20215 | Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 ) |
| #66792 | Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) . |
| #67770 | Japan Collection of Microorganism (JCM) ; Curators of the JCM; |
| #124043 | Isabel Schober, Julia Koblitz: Data extracted from sequence databases, automatically matched based on designation and taxonomy . |
| #125438 | Julia Koblitz, Lorenz Christian Reimer, Rüdiger Pukall, Jörg Overmann: Predicting bacterial phenotypic traits through improved machine learning using high-quality, curated datasets. 2024 ( DOI 10.1101/2024.08.12.607695 ) |
| #125439 | Philipp Münch, René Mreches, Martin Binder, Hüseyin Anil Gündüz, Xiao-Yin To, Alice McHardy: deepG: Deep Learning for Genome Sequence Data. R package version 0.3.1 . |
| #126262 | A. Lissin, I. Schober, J. F. Witte, H. Lüken, A. Podstawka, J. Koblitz, B. Bunk, P. Dawyndt, P. Vandamme, P. de Vos, J. Overmann, L. C. Reimer: StrainInfo—the central database for linked microbial strain identifiers. ( DOI 10.1093/database/baaf059 ) |
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