Mycobacterium colombiense (DSM 45105, CECT 3035, CIP 108962)

Name: Mycobacterium colombiense (DSM 45105, CECT 3035, CIP 108962)
Creator: BacDive
License: http://creativecommons.org/licenses/by/4.0/

BacDive ID 8550

Type strain

Strain Designation 10B, B10

Culture col. no. DSM 45105 CECT 3035 CIP 108962 CCUG 55633 10B 2 more

NCBI tax ID(s) 1041522 339268

Special Collections DSMZ CCUG JCM CIP

History DSMZ <- E. Tortoli, Univ. Firenze; 10B CIP <- 2005, M. J. Garcia, Madrid, Spain: strain B10 JCM <-- CECT 3035 <-- M. J. Garcia 10B <-- M. I. Murcia. CIP <- 2005, M.J. Garcia, Madrid Univ., Madrid, Spain: strain B10

Links

Mycobacterium colombiense 10B is an obligate aerobe, rod-shaped bacterium that was isolated from blood of an HIV positive patient.

rod-shaped obligate aerobe genome sequence 16S sequence Bacteria

Name and taxonomic classification

SI-ID 297257

CECT 3035,CIP 108962,DSM 45105,JCM 16228,CCUG 55633

@ref 20215

Last LPSN update 2026-05-29 08:26:53

Domain Bacteria

Phylum Actinomycetota

Class Actinomycetes

Order Mycobacteriales

Family Mycobacteriaceae

Genus Mycobacterium

Species Mycobacterium colombiense

Full scientific name Mycobacterium colombiense Murcia et al. 2006

Morphology

Cell morphology

@ref	Cell shape	Motility
118706	rod-shaped

Colony morphology

118706

Hemolysis ability0

Multimedia

@ref:	12347
multimedia content:	DSM_45105.jpg
multimedia.multimedia content:	https://www.dsmz.de/microorganisms/photos/DSM_45105.jpg
caption:	Medium 645 37°C
intellectual property rights:	© Leibniz-Institut DSMZ
manual_annotation:	1

Culture and growth conditions

Culture medium

@ref	Name	Medium link	Composition
12347	MIDDLEBROOK MEDIUM (DSMZ Medium 645)	Medium recipe at MediaDive	Name: MIDDLEBROOK MEDIUM (DSMZ Medium 645) Composition: Bacto Middlebrook 7H10 agar 20.9945 g/l Glycerol Distilled water
42061	MEDIUM 55 - for Mycobacterium
118706	CIP Medium 55	Medium recipe at CIP

Culture temp

@ref	Growth	Type	Temperature (°C)
12347	positive	growth	37
42061	positive	growth	37
67770	positive	growth	37

Physiology and metabolism

Oxygen tolerance

@ref	Oxygen tolerance	Confidence
118706	obligate aerobe
125439	obligate aerobe	99.5

Metabolite utilization

@ref	Chebi-ID	Metabolite	Utilization activity	Kind of utilization tested
118706	17632 ChEBI	nitrate	+	reduction
118706	16301 ChEBI	nitrite	-	reduction

Metabolite production

@ref	Chebi-ID	Metabolite	Production
118706	35581 ChEBI	indole

Enzymes

@ref	Value	Activity	Ec
68382	acid phosphatase	+	3.1.3.2	from API zym
118706	alcohol dehydrogenase	-	1.1.1.1
68382	alkaline phosphatase	-	3.1.3.1	from API zym
68382	alpha-chymotrypsin	-	3.4.21.1	from API zym
68382	alpha-fucosidase	-	3.2.1.51	from API zym
68382	alpha-galactosidase	-	3.2.1.22	from API zym
68382	alpha-glucosidase	+	3.2.1.20	from API zym
68382	alpha-mannosidase	-	3.2.1.24	from API zym
68382	beta-galactosidase	-	3.2.1.23	from API zym
68382	beta-glucosidase	-	3.2.1.21	from API zym
68382	beta-glucuronidase	-	3.2.1.31	from API zym
118706	catalase	+	1.11.1.6
68382	cystine arylamidase	-	3.4.11.3	from API zym
68382	esterase (C 4)	+		from API zym
68382	esterase lipase (C 8)	+		from API zym
68382	leucine arylamidase	+	3.4.11.1	from API zym
68382	lipase (C 14)	-		from API zym
118706	lysine decarboxylase	-	4.1.1.18
68382	N-acetyl-beta-glucosaminidase	-	3.2.1.52	from API zym
68382	naphthol-AS-BI-phosphohydrolase	+		from API zym
118706	ornithine decarboxylase	-	4.1.1.17
118706	oxidase	-
68382	trypsin	-	3.4.21.4	from API zym
118706	urease	+	3.5.1.5
68382	valine arylamidase	-		from API zym

API zym

@ref	Control	Alkaline phosphatase	Esterase (C 4)	2-naphtyl caprylateEsterase Lipase (C 8)	Lipase (C 14)	L-leucyl-2-naphthylamideLeucine arylamidase	L-valyl-2-naphthylamideValine arylamidase	L-cystyl-2-naphthylamideCystine arylamidase	Trypsin	alpha- Chymotrypsin	Acid phosphatase	Naphthol-AS-BI-phosphateNaphthol-AS-BI-phosphohydrolase	alpha- Galactosidase	beta- Galactosidase	beta- Glucuronidase	alpha- Glucosidase	beta- Glucosidase	N-acetyl-beta- glucosaminidase	alpha- Mannosidase	alpha- Fucosidase
118706	-	-	+	+	-	+	-	-	-	-	+	+	-	-	-	+	-	-	-	-

Isolation, sampling and environmental information

Isolation source categories

Cat1	Cat2	Cat3
#Infection	#Patient	-
#Host Body Product	#Fluids	#Blood

Isolation

@ref	Sample type	Host species	Sampling date	Geographic location	Country	Country ISO 3 Code	Continent	Isolation date
12347	blood of an HIV positive patient	Homo sapiens			Colombia	COL	Middle and South America
60679	Human blood,AIDS patient	Homo sapiens	1995	Bogota	Colombia	COL	Middle and South America
67770	Blood of an HIV-positive patient	Homo sapiens			Colombia	COL	Middle and South America
118706	Blood culture			Bogota	Colombia	COL	Middle and South America	1995

Taxonmaps

69479

Global distribution of 16S sequence GQ153275 (>99% sequence identity) for Mycobacterium from Microbeatlas

Aquatic Samples	4789
Soil Samples	12779
Animal Samples	3677
Plant Samples	2833
Total Samples	24078

Interaction and safety

Risk assessment

@ref	Biosafety level	Biosafety level comment
12347	2	Risk group (German classification) According to TRBA 466
118706	1	Risk group (French classification) According to TRBA 466

Sequence information

Genome sequences

@ref	Description	Assembly level	INSDC accession	BV-BRC accession	IMG accession	NCBI tax ID	Score
66792	ASM210575v1 assembly for Mycobacterium colombiense CECT 3035	complete	GCA_002105755	1041522.28		1041522	94.94
67770	ASM22210v4 assembly for Mycobacterium colombiense CECT 3035	contig	GCA_000222105	1041522.3	2562617111	1041522	76.05

16S sequences

@ref	Description	Accession	Length	NCBI tax ID
20218	Mycobacterium colombiense strain CIP108962 16S ribosomal RNA gene, partial sequence	GQ153275	1495	1041522
12347	Mycobacterium colombiense partial 16S rRNA gene and ITS1, type strain:10B	AM062764	1807	1041522
124043	Mycobacterium colombiense CECT 3035 16S ribosomal RNA gene, partial sequence.	OK539011	833	1041522

GC content

@ref	GC-content (mol%)	Method
67770	68.1	genome sequence analysis

Genome-based predictions

Predictions

Predictions from Deep Learning for Genome Sequence Data. R package version 0.3.1 based on: ASM210575v1 assembly for Mycobacterium colombiense CECT 3035
BV-BRC: 1041522.28

@ref	Trait	Model	Prediction	Confidence in %	In training data
125439	oxygen_tolerance	BacteriaNetⓘ	obligate aerobe	99.50	no
125439	gram_stain	BacteriaNetⓘ	positive	81.34	no
125439	motility	BacteriaNetⓘ	no	76.47	no
125439	spore_formation	BacteriaNetⓘ	no	88.42	no

Predictions from bacterial phenotypic traits through improved machine learning using high-quality, curated datasets based on: Mycobacterium colombiense CECT 3035 CECT 3035
NCBI: GCA_002105755.1

@ref	Trait	Model	Prediction	Confidence in %	In training data
125438	gram-positive	gram-positiveⓘ	yes	88.30	no
125438	anaerobic	anaerobicⓘ	no	95.07	no
125438	aerobic	aerobicⓘ	yes	79.16	yes
125438	spore-forming	spore-formingⓘ	no	64.12	no
125438	thermophilic	thermophileⓘ	no	95.50	yes
125438	flagellated	motile2+ⓘ	no	86.50	no

Literature

Topic	Title	Authors	Journal	DOI	Year
Genetics	Diversity and antimicrobial resistance profiles of Mycobacterium avium complex clinical isolates in Thailand based on whole genome comparative analysis.	Sawaswong V, Wongjarit K, Petsong S, Yuliani Y, Somsukpiroh U, Faksri K, Forde T, Payungporn S, Rotcheewaphan S.	Sci Rep	10.1038/s41598-024-84511-z	2025
	Natural Honey-Propolis Combinations with Health-Promoting Potential: Antibacterial Activity Against Foodborne Pathogens.	Sanchez-Martin V, Lopez-Parra MB, Iriondo-DeHond A, Wojdylo A, Michalska-Ciechanowska A, Haza AI, Morales P, Del Castillo MD.	Pharmaceuticals (Basel)	10.3390/ph18070988	2025
	Enterococcus mundtii A2 biofilm and its anti-adherence potential against pathogenic microorganisms on stainless steel 316L.	Zanzan M, Ezzaky Y, Hamadi F, Achemchem F.	Braz J Microbiol	10.1007/s42770-024-01266-5	2024
	In Silico Study of Mercury Resistance Genes Extracted from Pseudomonas spp. Involved in Bioremediation: Understanding the Promoter Regions and Regulatory Elements.	Dibbisa D, Wagari G.	Int J Genomics	10.1155/2022/6185615	2022
	Stigmas and Petals of Crocus sativus L. (Taliouine, Morocco): Comparative Evaluation of Their Phenolic Compounds, Antioxidant, and Antibacterial Activities.	Benkerroum A, Oubella K, Zini S, Boussif K, Mouhanni H, Achemchem F.	ScientificWorldJournal	10.1155/2024/6676404	2024
	Deciphering the virulence factors of the opportunistic pathogen Mycobacterium colombiense.	Gonzalez-Perez MN, Murcia MI, Parra-Lopez C, Blom J, Tauch A.	New Microbes New Infect	10.1016/j.nmni.2016.09.007	2016
Genetics	Characterization of a Ligilactobacillus salivarius Strain Isolated from a Cheese Seal Which Was Last Used in 1936.	Alba C, Arroyo R, Fernandez L, Narbad A, Rodriguez JM.	Foods	10.3390/foods13132005	2024
	Disassembly activates Retron-Septu for antiphage defense.	Wang C, Rish AD, Armbruster EG, Xie J, Loveland AB, Shen Z, Gu B, Korostelev AA, Pogliano J, Fu TM.	Science	10.1126/science.adv3344	2025
	A Robust Growth-Based Selection Platform to Evolve an Enzyme via Dependency on Noncanonical Tyrosine Analogues.	Jansen SC, Mayer C.	JACS Au	10.1021/jacsau.4c00070	2024
	Isolation and characterization of bioprotective lactic acid bacteria from Moroccan fish and seafood.	Elidrissi A, Ezzaky Y, Boussif K, Achemchem F.	Braz J Microbiol	10.1007/s42770-023-01077-0	2023
	Application of a bacteriocin-like inhibitory substance producing Enterococcus durans E204 strain, isolated from camel milk, to control Listeria monocytogenes CECT 4032 in goat jben	Khay EO, Idaomar M, El Moussaoui N, Abrini J.	Ann Microbiol	10.1007/s13213-013-0666-1	2014
	Study of the Antibacterial Activity of Rich Polyphenolic Extracts Obtained from Cytisus scoparius against Foodborne Pathogens.	Calvo LG, Castillo A, Villarino RA, Rama JLR, Abril AG, de Miguel T.	Antibiotics (Basel)	10.3390/antibiotics12111645	2023
	Study of the probiotic potential and evaluation of the survival rate of Lactiplantibacillus plantarum lyophilized as a function of cryoprotectant.	Yuste A, Arosemena EL, Calvo MA.	Sci Rep	10.1038/s41598-021-98723-0	2021
	Antimicrobial Effects and Antioxidant Activity of Myrtus communis L. Essential Oil in Beef Stored under Different Packaging Conditions.	Moura D, Vilela J, Saraiva S, Monteiro-Silva F, De Almeida JMMM, Saraiva C.	Foods	10.3390/foods12183390	2023
	Selecting Better Biocatalysts by Complementing Recoded Bacteria.	Rubini R, Jansen SC, Beekhuis H, Rozeboom HJ, Mayer C.	Angew Chem Int Ed Engl	10.1002/anie.202213942	2023
	Symbiosis of Carpenter Bees with Uncharacterized Lactic Acid Bacteria Showing NAD Auxotrophy.	Kawasaki S, Ozawa K, Mori T, Yamamoto A, Ito M, Ohkuma M, Sakamoto M, Matsutani M.	Microbiol Spectr	10.1128/spectrum.00782-23	2023
	Structure of the 4-O-[1-Carboxyethyl]-d-Mannose-Containing O-Specific Polysaccharide of a Halophilic Bacterium Salinivibrio sp. EG9S8QL.	Sigida EN, Ibrahim IM, Kokoulin MS, Abulreesh HH, Elbanna K, Konnova SA, Fedonenko YP.	Mar Drugs	10.3390/md19090508	2021
	Production of Pumilarin and a Novel Circular Bacteriocin, Altitudin A, by Bacillus altitudinis ECC22, a Soil-Derived Bacteriocin Producer.	Lafuente I, Sevillano E, Pena N, Cuartero A, Hernandez PE, Cintas LM, Munoz-Atienza E, Borrero J.	Int J Mol Sci	10.3390/ijms25042020	2024
	Recombinant Mycobacterium bovis BCG-Based HIV Vaccine: Failures and Promising Approaches for a Successful Vaccine Strategy.	Joseph-Munne J, Maya-Hoyos M, Saubi N, Perez S, Lopez MAM, Baron E, Soto CY.	Vaccines (Basel)	10.3390/vaccines13060606	2025
	Immunomodulatory Activity on Human Macrophages by Cell-Free Supernatants to Explore the Probiotic and Postbiotic Potential of Lactiplantibacillus plantarum Strains of Plant Origin.	Rocchetti MT, Russo P, De Simone N, Capozzi V, Spano G, Fiocco D.	Probiotics Antimicrob Proteins	10.1007/s12602-023-10084-4	2024
	Contact lens hydrophobicity and roughness effects on bacterial adhesion.	Giraldez MJ, Resua CG, Lira M, Oliveira ME, Magarinos B, Toranzo AE, Yebra-Pimentel E.	Optom Vis Sci	10.1097/opx.0b013e3181da8656	2010
	Antimicrobial Effect of Simira ecuadorensis Extracts and Their Impact on Improving Shelf Life in Chicken and Fish Products.	Reyes JF, Diez AM, Melero B, Rovira J, Jaime I.	Foods	10.3390/foods11152352	2022
	Phytochemicals Determination, and Antioxidant, Antimicrobial, Anti-Inflammatory and Anticancer Activities of Blackberry Fruits.	Gil-Martinez L, Mut-Salud N, Ruiz-Garcia JA, Falcon-Pineiro A, Maijo-Ferre M, Banos A, De la Torre-Ramirez JM, Guillamon E, Verardo V, Gomez-Caravaca AM.	Foods	10.3390/foods12071505	2023
Pathogenicity	Inactivation of Listeria monocytogenes in raw fruits by enterocin AS-48.	Molinos AC, Abriouel H, Ben Omar N, Lucas R, Valdivia E, Galvez A.	J Food Prot	10.4315/0362-028x-71.12.2460	2008
	Nisin S, a Novel Nisin Variant Produced by Ligilactobacillus salivarius P1CEA3.	Sevillano E, Pena N, Lafuente I, Cintas LM, Munoz-Atienza E, Hernandez PE, Borrero J.	Int J Mol Sci	10.3390/ijms24076813	2023
	Whole-Genome Sequence of a Novel Species, Mycobacterium yongonense DSM 45126T.	Kim BJ, Kim BR, Lee SY, Seok SH, Kook YH, Kim BJ.	Genome Announc	10.1128/genomea.00604-13	2013
	Lactiplantibacillus plantarum from Unexplored Tunisian Ecological Niches: Antimicrobial Potential, Probiotic and Food Applications	Selmi H, Rocchetti M, Capozzi V, Semedo-Lemsaddek T, Fiocco D, Spano G, Abidi F.	Microorganisms		2023
	In Silico Perspectives on the Prediction of the PLP's Epitopes involved in Multiple Sclerosis.	Zamanzadeh Z, Ataei M, Nabavi SM, Ahangari G, Sadeghi M, Sanati MH.	Iran J Biotechnol	10.15171/ijb.1356	2017
	Characterization, Bioactivity and Application of Chitosan-Based Nanoparticles in a Food Emulsion Model.	Oliveira Lima K, Barreto Pinilla CM, Aleman A, Lopez-Caballero ME, Gomez-Guillen MC, Montero P, Prentice C.	Polymers (Basel)	10.3390/polym13193331	2021
	Antifungal Activity against Fusarium culmorum of Stevioside, Silybum marianum Seed Extracts, and Their Conjugate Complexes.	Buzon-Duran L, Martin-Gil J, Ramos-Sanchez MDC, Perez-Lebena E, Marcos-Robles JL, Fombellida-Villafruela A, Martin-Ramos P.	Antibiotics (Basel)	10.3390/antibiotics9080440	2020
	Virulence and immune response induced by Mycobacterium avium complex strains in a model of progressive pulmonary tuberculosis and subcutaneous infection in BALB/c mice.	Gonzalez-Perez M, Marino-Ramirez L, Parra-Lopez CA, Murcia MI, Marquina B, Mata-Espinoza D, Rodriguez-Miguez Y, Baay-Guzman GJ, Huerta-Yepez S, Hernandez-Pando R.	Infect Immun	10.1128/iai.00150-13	2013
Phylogeny	Prevalence of an Intestinal ST40 Enterococcus faecalis over Other E. faecalis Strains in the Gut Environment of Mice Fed Different High Fat Diets.	Sanchez B, Cobo A, Hidalgo M, Martinez-Rodriguez AM, Prieto I, Galvez A, Martinez-Canamero M.	Int J Mol Sci	10.3390/ijms21124330	2020
	Stability of enterocin AS-48 in fruit and vegetable juices.	Grande MJ, Lucas R, Valdivia E, Abriouel H, Maqueda M, Omar NB, Martinez-Canamero M, Galvezi A.	J Food Prot	10.4315/0362-028x-68.10.2085	2005
	Control of Listeria monocytogenes in model sausages by enterocin AS-48.	Ananou S, Garriga M, Hugas M, Maqueda M, Martinez-Bueno M, Galvez A, Valdivia E.	Int J Food Microbiol	10.1016/j.ijfoodmicro.2004.12.024	2005
Metabolism	Inhibition of Listeria monocytogenes by enterocin EJ97 produced by Enterococcus faecalis EJ97.	Garcia MT, Marinez Canamero M, Lucas R, Ben Omar N, Perez Pulido R, Galvez A.	Int J Food Microbiol	10.1016/s0168-1605(03)00051-5	2004
Enzymology	Kinetic, mutational, and structural analysis of malonate semialdehyde decarboxylase from Coryneform bacterium strain FG41: mechanistic implications for the decarboxylase and hydratase activities.	Guo Y, Serrano H, Poelarends GJ, Johnson WH, Hackert ML, Whitman CP.	Biochemistry	10.1021/bi400567a	2013
	Multiphasic strain differentiation of atypical mycobacteria from elephant trunk wash.	Chan KG, Loke MF, Ong BL, Wong YL, Hong KW, Tan KH, Kaur S, Ng HF, Abdul Razak M, Ngeow YF.	PeerJ	10.7717/peerj.1367	2015
	Proteolytic and antimicrobial activity of lactic acid bacteria grown in goat milk.	Atanasova J, Moncheva P, Ivanova I.	Biotechnol Biotechnol Equip	10.1080/13102818.2014.971487	2014
	The interactions of bacteriophage Ace and Shiga toxin-producing Escherichia coli during biocontrol.	Pinto G, Minnich SA, Hovde CJ, Oliveira H, Smidt H, Almeida C, Azeredo J.	FEMS Microbiol Ecol	10.1093/femsec/fiab105	2021
Pathogenicity	Molecular and cellular responses of the pathogenic fungus Lomentospora prolificans to the antifungal drug voriconazole.	Pellon A, Ramirez-Garcia A, Buldain I, Antoran A, Rementeria A, Hernando FL.	PLoS One	10.1371/journal.pone.0174885	2017
Genetics	Molecular Taxonomic Evidence for Two Distinct Genotypes of Mycobacterium yongonense via Genome-Based Phylogenetic Analysis.	Kim BJ, Kim BR, Lee SY, Kim GN, Kook YH, Kim BJ.	PLoS One	10.1371/journal.pone.0152703	2016
Phylogeny	Noncontiguous finished genome sequence and description of Intestinimonas massiliensis sp. nov strain GD2^T , the second Intestinimonas species cultured from the human gut.	Afouda P, Durand GA, Lagier JC, Labas N, Cadoret F, Armstrong N, Raoult D, Dubourg G.	Microbiologyopen	10.1002/mbo3.621	2019
	Fresh-cut pineapple as a new carrier of probiotic lactic acid bacteria.	Russo P, de Chiara ML, Vernile A, Amodio ML, Arena MP, Capozzi V, Massa S, Spano G.	Biomed Res Int	10.1155/2014/309183	2014
Enzymology	A fast, reliable, and sensitive method for detection and quantification of Listeria monocytogenes and Escherichia coli O157:H7 in ready-to-eat fresh-cut products by MPN-qPCR.	Russo P, Botticella G, Capozzi V, Massa S, Spano G, Beneduce L.	Biomed Res Int	10.1155/2014/608296	2014
Metabolism	A novel P(1B)-type Mn2+-transporting ATPase is required for secreted protein metallation in mycobacteria.	Padilla-Benavides T, Long JE, Raimunda D, Sassetti CM, Arguello JM.	J Biol Chem	10.1074/jbc.m112.448175	2013
	Determination of Dehydrogenase Activities Involved in D-Glucose Oxidation in Gluconobacter and Acetobacter Strains.	Sainz F, Jesus Torija M, Matsutani M, Kataoka N, Yakushi T, Matsushita K, Mas A.	Front Microbiol	10.3389/fmicb.2016.01358	2016
	Redox homeostasis in Mycobacterium tuberculosis is modulated by a novel actinomycete-specific transcription factor.	Khan MZ, Singha B, Ali MF, Taunk K, Rapole S, Gourinath S, Nandicoori VK.	EMBO J	10.15252/embj.2020106111	2021
	The development of a novel Mycobacterium-Escherichia coli shuttle vector system using pMyong2, a linear plasmid from Mycobacterium yongonense DSM 45126T.	Lee H, Kim BJ, Kim BR, Kook YH, Kim BJ.	PLoS One	10.1371/journal.pone.0122897	2015
	Effect of immersion solutions containing enterocin AS-48 on Listeria monocytogenes in vegetable foods.	Molinos AC, Abriouel H, Ben Omar N, Valdivia E, Lopez RL, Maqueda M, Canamero MM, Galvez A.	Appl Environ Microbiol	10.1128/aem.71.12.7781-7787.2005	2005
	Therapeutic index of gramicidin S is strongly modulated by D-phenylalanine analogues at the beta-turn.	Solanas C, de la Torre BG, Fernandez-Reyes M, Santiveri CM, Jimenez MA, Rivas L, Jimenez AI, Andreu D, Cativiela C.	J Med Chem	10.1021/jm800886n	2009
	Sequence inversion and phenylalanine surrogates at the beta-turn enhance the antibiotic activity of gramicidin S.	Solanas C, de la Torre BG, Fernandez-Reyes M, Santiveri CM, Jimenez MA, Rivas L, Jimenez AI, Andreu D, Cativiela C.	J Med Chem	10.1021/jm100143f	2010
Metabolism	Biocatalytic production of perillyl alcohol from limonene by using a novel Mycobacterium sp. cytochrome P450 alkane hydroxylase expressed in Pseudomonas putida.	van Beilen JB, Holtackers R, Luscher D, Bauer U, Witholt B, Duetz WA.	Appl Environ Microbiol	10.1128/aem.71.4.1737-1744.2005	2005
Pathogenicity	Antilisterial activity of peptide AS-48 and study of changes induced in the cell envelope properties of an AS-48-adapted strain of Listeria monocytogenes.	Mendoza F, Maqueda M, Galvez A, Martinez-Bueno M, Valdivia E.	Appl Environ Microbiol	10.1128/aem.65.2.618-625.1999	1999
Pathogenicity	Disseminated Cutaneous Infection of Mycobacterium colombiense in a Patient with Myelodysplastic Syndrome.	Inagaki Y, Ito T, Kato T, Ono Y, Sawa M.	Intern Med	10.2169/internalmedicine.7890-16	2018
	In silico analysis of promoter regions to identify regulatory elements in TetR family transcriptional regulatory genes of Mycobacterium colombiense CECT 3035.	Hamde F, Dinka H, Naimuddin M	J Genet Eng Biotechnol	10.1186/s43141-022-00331-6	2022
Biotechnology	Sliding Motility, Biofilm Formation, and Glycopeptidolipid Production in Mycobacterium colombiense Strains.	Maya-Hoyos M, Leguizamon J, Marino-Ramirez L, Soto CY	Biomed Res Int	10.1155/2015/419549	2015
Pathogenicity	Identification of potential biomarkers to distinguish Mycobacterium colombiense from other mycobacterial species.	Leguizamon J, Hernandez J, Murcia MI, Soto CY	Mol Cell Probes	10.1016/j.mcp.2012.08.009	2012
Genetics	Genome sequence of the Mycobacterium colombiense type strain, CECT 3035.	Gonzalez-Perez M, Murcia MI, Landsman D, Jordan IK, Marino-Ramirez L	J Bacteriol	10.1128/JB.05928-11	2011
Phylogeny	Mycobacterium colombiense sp. nov., a novel member of the Mycobacterium avium complex and description of MAC-X as a new ITS genetic variant.	Murcia MI, Tortoli E, Menendez MC, Palenque E, Garcia MJ	Int J Syst Evol Microbiol	10.1099/ijs.0.64190-0	2006

References

#12347	Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 45105
#20215	Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )
#20218	Verslyppe, B., De Smet, W., De Baets, B., De Vos, P., Dawyndt P.: StrainInfo introduces electronic passports for microorganisms.. Syst Appl Microbiol. 37: 42 - 50 2014 ( DOI 10.1016/j.syapm.2013.11.002 , PubMed 24321274 )
#42061	; Curators of the CIP;
#60679	Culture Collection University of Gothenburg (CCUG) ; Curators of the CCUG; CCUG 55633
#66792	Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .
#67770	Japan Collection of Microorganism (JCM) ; Curators of the JCM;
#68382	Automatically annotated from API zym .
#69479	João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta .
#118706	Collection of Institut Pasteur ; Curators of the CIP; CIP 108962
#124043	Isabel Schober, Julia Koblitz: Data extracted from sequence databases, automatically matched based on designation and taxonomy .
#125438	Julia Koblitz, Lorenz Christian Reimer, Rüdiger Pukall, Jörg Overmann: Predicting bacterial phenotypic traits through improved machine learning using high-quality, curated datasets. 2024 ( DOI 10.1101/2024.08.12.607695 )
#125439	Philipp Münch, René Mreches, Martin Binder, Hüseyin Anil Gündüz, Xiao-Yin To, Alice McHardy: deepG: Deep Learning for Genome Sequence Data. R package version 0.3.1 .
#126262	A. Lissin, I. Schober, J. F. Witte, H. Lüken, A. Podstawka, J. Koblitz, B. Bunk, P. Dawyndt, P. Vandamme, P. de Vos, J. Overmann, L. C. Reimer: StrainInfo—the central database for linked microbial strain identifiers. ( DOI 10.1093/database/baaf059 )

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Mycobacterium colombiense (DSM 45105, CECT 3035, CIP 108962)

Name and taxonomic classification

Morphology

Cell morphology

Colony morphology

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Culture and growth conditions

Culture medium

Culture temp

Physiology and metabolism

Oxygen tolerance

Metabolite utilization

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Enzymes

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Isolation, sampling and environmental information

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Isolation

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Sequence information

Genome sequences

Genome browser: GCA_002105755

16S sequences

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