Name: Mycobacterium parascrofulaceum DSM 44648
Creator: BacDive
License: http://creativecommons.org/licenses/by-nc/4.0/

Strain identifier

BacDive ID: 8533

Type strain:

Species: Mycobacterium parascrofulaceum

Culture col. no.: DSM 44648, ATCC BAA 614, HSC 68, JCM 13015, CIP 108112, KCTC 9979

Strain history: KCTC 9979 <-- C. Y. Turenne HSC-68 <-- J. N. Wolfe.

NCBI tax ID(s): 240125 (species)

Other strains from Mycobacterium parascrofulaceum

M. parascrofulaceum M6, DSM 43222, SN 601
M. parascrofulaceum CCUG 20996
M. parascrofulaceum CCUG 27854, ATCC 35787
M. parascrofulaceum CCUG 28068

Section

Mycobacterium parascrofulaceum DSM 44648 is a mesophilic bacterium that was isolated from cervix biopsy.

mesophilic
16S sequence
Bacteria
genome sequence

Information on the name and the taxonomic classification. Name and taxonomic classification

	Last LPSN update	07-12-2022 (DD-MM-YYYY)
	Domain	"Bacteria"
	Phylum	*Actinomycetota*
	Class	*Actinomycetes*
	Order	*Mycobacteriales*
	Family	*Mycobacteriaceae*
	Genus	*Mycobacterium*
	Species	**Mycobacterium parascrofulaceum**
	Full Scientific Name (PNU)	Mycobacterium parascrofulaceum Turenne et al. 2004

Information on morphological and physiological properties Morphology

[Ref.: #30100]

Motility

[Ref.: #30100]

Pigment production

yes

Information on culture and growth conditions Culture and growth conditions

[Ref.: #11957]

Culture medium

MIDDLEBROOK MEDIUM (DSMZ Medium 645)

[Ref.: #11957]

Culture medium growth

[Ref.: #11957]

Culture medium link

Medium recipe provided by DSMZ

[Ref.: #11957]

Culture medium composition

expand / minimize

[Ref.: #36338]

Culture medium

MEDIUM 55 - for Mycobacterium

[Ref.: #36338]

Culture medium growth

		Temperature
[Ref.: #11957]	growth	37 °C
[Ref.: #30100]	growth	25-37 °C
[Ref.: #30100]	optimum	37 °C
[Ref.: #36338]	growth	37 °C
[Ref.: #67770]	growth	37 °C

[Ref.: #11957]	Temperature range	mesophilic
[Ref.: #30100]	Temperature range	mesophilic
[Ref.: #36338]	Temperature range	mesophilic
[Ref.: #67770]	Temperature range	mesophilic

Information on physiology and metabolism Physiology and metabolism

	Halophily	Salt	Tested relation		Salt conc.
[Ref.: #30100]		NaCl		growth	5	%

	Enzyme	Enzyme activity	EC number
[Ref.: #30100]	catalase	+	1.11.1.6
[Ref.: #30100]	pyrazinamidase	+	3.5.1.B15
[Ref.: #30100]	urease	+	3.5.1.5

Information on isolation source, the sampling and environmental conditions Isolation, sampling and environmental information

[Ref.: #11957]	Sample type/isolated from	cervix biopsy
[Ref.: #11957]	Geographic location (country and/or sea, region)	Winnipeg, Manitoba
[Ref.: #11957]	Country	Canada
[Ref.: #11957]	Country ISO 3 Code	CAN
[Ref.: #11957]	Continent	North America

[Ref.: #67770]	Sample type/isolated from	Cervix biopsy
[Ref.: #67770]	Geographic location (country and/or sea, region)	Manitoba
[Ref.: #67770]	Country	Canada
[Ref.: #67770]	Country ISO 3 Code	CAN
[Ref.: #67770]	Continent	North America
* marker position based on {}

Isolation sources categories

#Infection	#Patient	#Biopsy
#Host Body-Site	#Urogenital tract	#Ovary

What are isolation sources categories?

Information on possible application of the strain and its possible interaction with e.g. potential hosts Safety information

[Ref.: #11957]

Biosafety level

Risk group (German classification)
According to TRBA 466

Information on genomic background e.g. entries in nucleic sequence databass Sequence information

16S Sequence information:

Only first 5 entries are displayed. Click here to see all.

	Sequence accession description	Seq. accession number	Sequence length (bp)	Sequence database	Associated NCBI tax ID
[Ref.: #20218]	Mycobacterium parascrofulaceum strain BAA-614 16S ribosomal RNA gene, partial sequence; 16S-23S intergenic spacer region, complete sequence; and 23S ribosomal RNA gene, partial sequence	AY337279	373	ENA	525368 tax ID	*
[Ref.: #20218]	Mycobacterium parascrofulaceum strain ATCC BAA-614 16S ribosomal RNA gene, partial sequence	GQ153273	1483	ENA	525368 tax ID	*
[Ref.: #20218]	Mycobacterium parascrofulaceum strain ATCC BAA-614 16S ribosomal RNA gene, partial sequence	JF271815	1383	ENA	525368 tax ID	*
[Ref.: #20218]	Mycobacterium parascrofulaceum strain ATCC BAA-614 16S ribosomal RNA gene, partial sequence; 16S-23S ribosomal RNA intergenic spacer, complete sequence; and 23S ribosomal RNA gene, partial sequence	JQ411511	441	ENA	525368 tax ID	*
[Ref.: #20218]	Mycobacterium parascrofulaceum strain ATCC BAA-614 16S-23S ribosomal RNA intergenic spacer, partial sequence	JQ411531	281	ENA	525368 tax ID	*
[Ref.: #20218]	Mycobacterium parascrofulaceum strain CIP 108112 16S ribosomal RNA gene, partial sequence	AY943211	539	ENA	240125 tax ID	*
[Ref.: #30100]	Mycobacterium parascrofulaceum strain BAA-614 16S ribosomal RNA gene, partial sequence	AY337273	1468	GenBank	525368 tax ID

Genome sequence information:

	Sequence accession description	Seq. accession number	Assembly level (bp)	Sequence database	Associated NCBI tax ID
[Ref.: #67770]	Mycobacterium parascrofulaceum ATCC BAA-614 ATCC BAA-614	GCA_000164135	scaffold	GenBank	525368 tax ID

[Ref.: #67770]

GC-content

68.4 mol%

genome sequence analysis

Availability in culture collections External links

[Ref.: #11957]

Culture collection no.

DSM 44648, ATCC BAA 614, HSC 68, JCM 13015, CIP 108112, KCTC 9979

[Ref.: #20218]

Associated Passport(s) in StrainInfo

381468, 301569

Literature:

Topic	Title	Authors	Journal	DOI	Year
Phylogeny	Mycobacterium parascrofulaceum sp. nov., novel slowly growing, scotochromogenic clinical isolates related to Mycobacterium simiae.	Turenne CY, Cook VJ, Burdz TV, Pauls RJ, Thibert L, Wolfe JN, Kabani A	Int J Syst Evol Microbiol	10.1099/ijs.0.02940-0	2004	*

References

#11957

Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 44648

#20215

Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )

#20218

Verslyppe, B., De Smet, W., De Baets, B., De Vos, P., Dawyndt P.: StrainInfo introduces electronic passports for microorganisms.. Syst Appl Microbiol. 37: 42 - 50 2014 ( DOI 10.1016/j.syapm.2013.11.002 , PubMed 24321274 )

#30100

Barberan A, Caceres Velazquez H, Jones S, Fierer N.: Hiding in Plain Sight: Mining Bacterial Species Records for Phenotypic Trait Information. mSphere 2: 2017 ( DOI 10.1128/mSphere.00237-17 , PubMed 28776041 ) - originally annotated from #26456 (see below)

#36338 ; Curators of the CIP;
#67770 Japan Collection of Microorganism (JCM) ; Curators of the JCM;

#26456

IJSEM 1543 2004 ( DOI 10.1099/ijs.0.02940-0 , PubMed 15388708 )

* These data were automatically processed and therefore are not curated

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