Name: Mycobacterium yunnanensis DSM 44838
Creator: BacDive
License: http://creativecommons.org/licenses/by-nc/4.0/

Strain identifier

BacDive ID: 8532

Type strain:

Species: Mycobacterium yunnanensis

Culture col. no.: DSM 44838, KCTC 19022, YIM 70063

Strain history: <- W.-J. Li, YIM

NCBI tax ID(s): 368477 (species)

Section

Mycobacterium yunnanensis DSM 44838 is a mesophilic Actinobacterium that was isolated from forest soil.

mesophilic
16S sequence
genome sequence

Information on the name and the taxonomic classification. Name and taxonomic classification

[Ref.: #12019]	Domain	Bacteria
[Ref.: #12019]	Phylum	Actinobacteria
[Ref.: #12019]	Class	Actinobacteria
[Ref.: #12019]	Order	Actinomycetales
[Ref.: #12019]	Family	Mycobacteriaceae
[Ref.: #12019]	Genus	Mycobacterium
[Ref.: #12019]	Species	Mycobacterium yunnanensis
[Ref.: #12019]	Full Scientific Name	Mycobacterium yunnanensis Li et al.
[Ref.: #12019]	Type strain

Information on culture and growth conditions Culture and growth conditions

[Ref.: #12019]

Culture medium

MIDDLEBROOK MEDIUM (DSMZ Medium 645)

[Ref.: #12019]

Culture medium growth

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Culture medium link

Medium recipe at MediaDive

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Culture medium composition

expand / minimize

	Temperatures	Kind of temperature		Temperature
[Ref.: #12019]			growth	28 °C

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Temperature range

mesophilic

Information on isolation source, the sampling and environmental conditions Isolation, sampling and environmental information

[Ref.: #12019]	Sample type/isolated from	forest soil
[Ref.: #12019]	Geographic location (country and/or sea, region)	Yunnan Province
[Ref.: #12019]	Country	China
[Ref.: #12019]	Country ISO 3 Code	CHN
[Ref.: #12019]	Continent	Asia
* marker position based on {}

Isolation sources categories

#Environmental	#Terrestrial	#Forest
#Environmental	#Terrestrial	#Soil

What are isolation sources categories?

Information on genomic background e.g. entries in nucleic sequence databass Sequence information

16S Sequence information:

	Sequence accession description	Seq. accession number	Sequence length (bp)	Sequence database	Associated NCBI tax ID
[Ref.: #20218]	Mycobacterium yunnanensis strain DSM 44838 16S ribosomal RNA gene, partial sequence	DQ350153	505	ENA	368477 tax ID	*

Genome sequence information:

	Sequence accession description	Seq. accession number	Assembly level	Sequence database	Associated NCBI tax ID
[Ref.: #66792]	Mycobacterium yunnanensis DSM 44838	GCA_025823185	scaffold	GenBank	368477 tax ID	*

Data predicted using genome information as a basis Genome-based predictions

	Trait	Prediction	Confidence in %	In training data
	Predictions from Diaspora project based on: Mycobacterium yunnanensis DSM 44838 NCBI: GCA_025823185.1
[Ref.: #69480]	motile	no	92.68	no
[Ref.: #69480]	flagellated	no	98.283	no
[Ref.: #69480]	gram-positive	yes	90.144	no
[Ref.: #69480]	anaerobic	no	99.412	no
[Ref.: #69480]	aerobic	yes	92.519	no
[Ref.: #69480]	halophile	no	94.502	no
[Ref.: #69480]	spore-forming	no	87.482	no
[Ref.: #69480]	glucose-ferment	no	91.332	no
[Ref.: #69480]	thermophile	no	99.442	no
[Ref.: #69480]	glucose-util	yes	88.896	no

Availability in culture collections External links

[Ref.: #12019]

Culture collection no.

DSM 44838, KCTC 19022, YIM 70063

References

#12019

Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 44838

#20218

Verslyppe, B., De Smet, W., De Baets, B., De Vos, P., Dawyndt P.: StrainInfo introduces electronic passports for microorganisms.. Syst Appl Microbiol. 37: 42 - 50 2014 ( DOI 10.1016/j.syapm.2013.11.002 , PubMed 24321274 )

#66792

Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

#69480

Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Predictions based on genome sequence made in the Diaspora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

* These data were automatically processed and therefore are not curated

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