Name: Mycobacterium frederiksbergense Fan9
Creator: BacDive
License: http://creativecommons.org/licenses/by-nc/4.0/

Strain identifier

BacDive ID: 8504

Type strain:

Species: Mycobacterium frederiksbergense

Strain Designation: Fan9

Variant: Isotype of BacDive ID 8499

Culture col. no.: DSM 45364, JCM 13014, KCTC 19370, KCTC 19100, NRRL B-24126

Strain history: <- KCTC; KCTC 19100 <- DSMZ <- U. Karlson, Miljo and Engeri, Roskilde Denmark; Fan9

NCBI tax ID(s): 117567 (species)

Other strains from Mycobacterium frederiksbergense

M. frederiksbergense FAn9, DSM 44346, KCTC 19100, NRRL ... (type strain)
M. frederiksbergense Fan9-2, DSM 45275
M. frederiksbergense Fan 9-3, DSM 45276

Section

Mycobacterium frederiksbergense Fan9 is a mesophilic bacterium that was isolated from coaltar contaminated soil, farmer gas works site.

mesophilic
Bacteria
genome sequence

Information on the name and the taxonomic classification. Name and taxonomic classification

	Last LPSN update	14-12-2023 (DD-MM-YYYY)
	Domain	"Bacteria"
	Phylum	*Actinomycetota*
	Class	*Actinomycetes*
	Order	*Mycobacteriales*
	Family	*Mycobacteriaceae*
	Genus	*Mycobacterium*
	Species	**Mycobacterium frederiksbergense**
	Full Scientific Name (LPSN)	Mycobacterium frederiksbergense Willumsen et al. 2001

Synonym

Mycolicibacterium frederiksbergense

Information on morphological and physiological properties Morphology

[Ref.: #16363]

Incubation period

8-14 days

Information on culture and growth conditions Culture and growth conditions

[Ref.: #16363]

Culture medium

MIDDLEBROOK MEDIUM (DSMZ Medium 645)

[Ref.: #16363]

Culture medium growth

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Culture medium link

Medium recipe at MediaDive

[Ref.: #16363]

Culture medium composition

expand / minimize

	Temperatures	Kind of temperature		Temperature
[Ref.: #16363]			growth	28-37 °C

[Ref.: #16363]

Temperature range

mesophilic

Information on isolation source, the sampling and environmental conditions Isolation, sampling and environmental information

[Ref.: #16363]	Sample type/isolated from	coaltar contaminated soil, farmer gas works site
[Ref.: #16363]	Geographic location (country and/or sea, region)	Copenhagen
[Ref.: #16363]	Country	Denmark
[Ref.: #16363]	Country ISO 3 Code	DNK
[Ref.: #16363]	Continent	Europe
* marker position based on {}

Isolation sources categories

#Engineered	#Contamination	-
#Environmental	#Terrestrial	#Geologic
#Environmental	#Terrestrial	#Soil

What are isolation sources categories?

Information on possible application of the strain and its possible interaction with e.g. potential hosts Safety information

[Ref.: #16363]

Biosafety level

Risk group (German classification)
According to TRBA 466

Information on genomic background e.g. entries in nucleic sequence databass Sequence information

Genome sequence information:

	Sequence accession description	Seq. accession number	Assembly level	Sequence database	Associated NCBI tax ID
[Ref.: #66792]	Mycolicibacterium frederiksbergense DSM 45364	GCA_025822145	scaffold	GenBank	117567 tax ID	*

Data predicted using genome information as a basis Genome-based predictions

	Trait	Prediction	Confidence in %	In training data
	Predictions from Diaspora project based on: Mycobacterium frederiksbergense DSM 45364 NCBI: GCA_025822145.1
[Ref.: #69480]	motile	no	92.503	no
[Ref.: #69480]	flagellated	no	97.709	no
[Ref.: #69480]	gram-positive	yes	89.247	no
[Ref.: #69480]	anaerobic	no	99.316	no
[Ref.: #69480]	aerobic	yes	90.137	no
[Ref.: #69480]	halophile	no	91.882	no
[Ref.: #69480]	spore-forming	no	77.783	no
[Ref.: #69480]	glucose-ferment	no	90.04	no
[Ref.: #69480]	glucose-util	yes	83.719	no
[Ref.: #69480]	thermophile	no	99.569	no

Availability in culture collections External links

[Ref.: #16363]

Culture collection no.

DSM 45364, JCM 13014, KCTC 19370, KCTC 19100, NRRL B-24126

Literature:

Topic	Title	Authors	Journal	DOI	Year
Phylogeny	Mycobacterium frederiksbergense sp. nov., a novel polycyclic aromatic hydrocarbon-degrading Mycobacterium species.	Willumsen P, Karlson U, Stackebrandt E, Kroppenstedt RM	Int J Syst Evol Microbiol	10.1099/00207713-51-5-1715	2001	*

References

#16363

Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 45364

#20215

Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )

#66792

Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

#69480

Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Predictions based on genome sequence made in the Diaspora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

* These data were automatically processed and therefore are not curated

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Mycobacterium frederiksbergense DSM 45364

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