Mycobacterium septicum (DSM 44393, ATCC 700731, CCUG 43574)

Name: Mycobacterium septicum (DSM 44393, ATCC 700731, CCUG 43574)
Creator: BacDive
License: http://creativecommons.org/licenses/by/4.0/

BacDive ID 8482

Type strain

Strain Designation Australia 9330, W4964

Culture col. no. DSM 44393 ATCC 700731 CCUG 43574 Australia 9330 W4964 2 more

NCBI tax ID(s) 1341646 98668

Special Collections DSMZ CCUG JCM CIP Wink compendium

History <- J. M. Brown, CDC, Atlanta; W4964 <- G. G. Hogg; Australia 9330 CIP 106642 <-- J. M. Brown W4964 <-- G. G. Hogg. CIP <- 2000, J.M. Brown, CDC, Atlanta, Georgia, USA: strain W4964 <- G.G. Hogg, Australia

Links

Mycobacterium septicum Australia 9330 is an aerobe, rod-shaped bacterium that was isolated from catheter tip of centrally located Hickman catheter.

rod-shaped aerobe genome sequence 16S sequence Bacteria

Name and taxonomic classification

SI-ID 44108

ATCC 700731,DSM 44393,CIP 106642,CCUG 43574,JCM 14743

@ref 20215

Last LPSN update 2026-02-09 11:19:43

Domain Bacteria

Phylum Actinomycetota

Class Actinomycetes

Order Mycobacteriales

Family Mycobacteriaceae

Genus Mycobacterium

Species Mycobacterium septicum

Full scientific name Mycobacterium septicum Schinsky et al. 2000

Synonyms (1)

Mycolicibacterium septicum

BacDive ID	Other strains from **Mycobacterium septicum** (3)	Type strain
8249	M. septicum DSM 43076, IMRU 12
8257	M. septicum Gent 5, DSM 43480, IMET 10653, SN 252 Typ ...
136951	M. septicum D13, CIP 108512

Morphology

Cell morphology

@ref	Cell shape	Confidence	Gram stain
122566	rod-shaped
125438		91
125438		92.223	positive
125439		90.2	positive

Colony morphology

@ref	Colony color	Incubation period	Medium used
19860	Ivory	10-14 days	5006
19860	Ivory	10-14 days	MB7H10
19860	Ivory	10-14 days	MB7H11
55946		4 days

Culture and growth conditions

Culture medium

@ref	Name	Medium link	Composition
11717	MIDDLEBROOK MEDIUM (DSMZ Medium 645)	Medium recipe at MediaDive	Name: MIDDLEBROOK MEDIUM (DSMZ Medium 645) Composition: Bacto Middlebrook 7H10 agar 20.9945 g/l Glycerol Distilled water
19860	MB7H10		Name: Middlebrook 7H10 (MB7H10) Broth Base Composition: amount in percent Middlebrook 7H10 Agar 1.9% Glycerol 0.5% OADC-Enrichment in ml (NL5633) 10ml Comments: Add broth base and glycerol to ddh2O. Adjust volumes. Autoclave. Cool to 42°C. Add OADC-stock. Sterilisation: 20 minutes Temperature:121°C PH before: PH after: Biological details Culture type: suitable for: Mycobacteria OADC stock solution old broth-name: OADC-Stock Composition: Bovine Serum Albumin, fraction V 5 % 1% Oleic Acid in 0.2N NaOH 5ml Glucose 2 % NaCl 0.85 % Comments: Melt 1% Oleic Acid in 65°C water bath. Dissolve all ingredients in 700ml of ddH2O. Adjust volume to 1L. Filter sterilize and store at 4°C. -To make 1% Oleic Acid in 0.2N NaOH: Dissolve 5g oleic acid (ampule) in 500ml 0.2N NaOH (300ml ddH2O + 20ml NaOH + adjust volume to 500ml). Heat solution to 55°C for oleic acid to melt. Store at -20°C in 50ml aliquots. There is no need to sterilize this. Sterilisation: 20 minutes Temperature:121°C PH before: PH after: Biological details Culture type: suitable for: Mycobacteria
19860	MB7H11		Name: Middlebrook 7H11 (MB7H11) Broth Base Composition: Middlebrook 7H11 Agar 2% Glycerol 0.5% OADC-Enrichment 10ml Comments: Add broth base and glycerol to ddH2O. Adjust volumes. Autoclave. Cool to 42°C. Add OADC-Stock. Sterilisation: 20 minutes Temperature:121°C PH before: PH after: Biological details Culture type: suitable for: Mycobacteria OADC stock solution old broth-name: OADC-Stock Composition: Bovine Serum Albumin, fraction V 5 % 1% Oleic Acid in 0.2N NaOH 5ml Glucose 2 % NaCl 0.85 % Comments: Melt 1% Oleic Acid in 65°C water bath. Dissolve all ingredients in 700ml of ddH2O. Adjust volume to 1L. Filter sterilize and store at 4°C. -To make 1% Oleic Acid in 0.2N NaOH: Dissolve 5g oleic acid (ampule) in 500ml 0.2N NaOH (300ml ddH2O + 20ml NaOH + adjust volume to 500ml). Heat solution to 55°C for oleic acid to melt. Store at -20°C in 50ml aliquots. There is no need to sterilize this. Sterilisation: 20 minutes Temperature:121°C PH before: PH after: Biological details Culture type: suitable for: Mycobacteria
19860	5006		Medium: 5006 Name: Composition (g/l) Sucrose 3,0 Dextrin 15,0 Meat extract 1,0 Yeast extract 2,0 Tryptone soy broth (Oxoid) 5,0 NaCl 0,5 K2HPO4 0,5 MgSO4 x 7 H2O 0,5 FeSO4 x 7 H2O 0,01 Agar 20,0 Preparation: Sterilisation: 20 minutes at 121°C pH before sterilisation: 7,3 Usage: Maintenance Organisms: All Actinomycetes
36370	MEDIUM 55 - for Mycobacterium
122566	CIP Medium 55	Medium recipe at CIP

Culture temp

@ref	Growth	Type	Temperature (°C)
11717	positive	growth	37
19860	positive	optimum	37
36370	positive	growth	30
55946	positive	growth	37
67770	positive	growth	28
122566	positive	growth	22-30
122566	negative	growth	10
122566	negative	growth	37
122566	negative	growth	45

Physiology and metabolism

Oxygen tolerance

@ref	Oxygen tolerance	Confidence
55946	aerobe
122566	obligate aerobe
125439	obligate aerobe	96

Metabolite utilization

@ref	Chebi-ID	Metabolite	Utilization activity	Kind of utilization tested
68379	17634 ChEBI	D-glucose	-	fermentation	from API Coryne
68379	16899 ChEBI	D-mannitol	-	fermentation	from API Coryne
68379	16988 ChEBI	D-ribose	-	fermentation	from API Coryne
68379	65327 ChEBI	D-xylose	-	fermentation	from API Coryne
68379	4853 ChEBI	esculin	+	hydrolysis	from API Coryne
68379	5291 ChEBI	gelatin	-	hydrolysis	from API Coryne
68379	28087 ChEBI	glycogen	-	fermentation	from API Coryne
122566	606565 ChEBI	hippurate	-	hydrolysis
68379	17716 ChEBI	lactose	-	fermentation	from API Coryne
68379	17306 ChEBI	maltose	-	fermentation	from API Coryne
68379	17632 ChEBI	nitrate	-	reduction	from API Coryne
122566	17632 ChEBI	nitrate	+	reduction
122566	17632 ChEBI	nitrate	-	respiration
122566	16301 ChEBI	nitrite	-	reduction
68379	17992 ChEBI	sucrose	-	fermentation	from API Coryne

Metabolite production

@ref	Chebi-ID	Metabolite	Production
122566	35581 ChEBI	indole

Enzymes

@ref	Value	Activity	Ec
68382	acid phosphatase	+	3.1.3.2	from API zym
68379	alkaline phosphatase	-	3.1.3.1	from API Coryne
68382	alpha-chymotrypsin	-	3.4.21.1	from API zym
68382	alpha-fucosidase	-	3.2.1.51	from API zym
68382	alpha-galactosidase	-	3.2.1.22	from API zym
68382	alpha-glucosidase	-	3.2.1.20	from API zym
68379	alpha-glucosidase	-	3.2.1.20	from API Coryne
122566	amylase	-
122566	beta-galactosidase	-	3.2.1.23
68379	beta-galactosidase	-	3.2.1.23	from API Coryne
68382	beta-glucosidase	+	3.2.1.21	from API zym
68379	beta-glucosidase	+	3.2.1.21	from API Coryne
68382	beta-glucuronidase	-	3.2.1.31	from API zym
68379	beta-glucuronidase	-	3.2.1.31	from API Coryne
122566	caseinase	-	3.4.21.50
122566	catalase	+	1.11.1.6
122566	DNase	-
68382	esterase (C 4)	+		from API zym
68382	esterase lipase (C 8)	+		from API zym
122566	gamma-glutamyltransferase	+	2.3.2.2
122566	gelatinase	-
68379	gelatinase	-		from API Coryne
122566	lecithinase	-
68382	leucine arylamidase	+	3.4.11.1	from API zym
122566	lipase	-
68382	lipase (C 14)	+		from API zym
68382	N-acetyl-beta-glucosaminidase	-	3.2.1.52	from API zym
68379	N-acetyl-beta-glucosaminidase	-	3.2.1.52	from API Coryne
68382	naphthol-AS-BI-phosphohydrolase	+		from API zym
122566	oxidase	-
122566	protease	-
68379	pyrrolidonyl arylamidase	-	3.4.19.3	from API Coryne
68382	trypsin	-	3.4.21.4	from API zym
122566	tween esterase	+
122566	urease	-	3.5.1.5

Fatty acid profile

Metadata FA analysis

@ref

55946

Fatty acid	Percentage	ECL
C18:1 ω9c	32.6	17.769
C16:0	31.4	16
C14:0	11.3	14
C16:1 ω7c/C15:0 ISO 2OH	9.9	15.85
C18:2 ω6,9c/C18:0 ANTE	5	17.724
TBSA 10Me18:0	3	18.392
C16:1 ω7c	2.3	15.819
C18:0	2	18
C16:1 ω9c	0.8	15.774
C17:1 ω8c	0.4	16.792
C12:0	0.4	12
C16:0 anteiso	0.4	15.717
C15:0	0.4	15
Unidentified	0.3	13.767

API coryne

@ref	Reduction of nitrateNIT	PYZ	PYRA	PAL	beta GUR	beta GAL	alpha GLU	beta NAG	ESC	URE	GEL	Control fermentationControl	GLU	RIB	XYL	MAN	MAL	LAC	SAC	GLYG	CAT
19860	-	+/-	-	-	-	-	-	-	+	+/-	-	not determinedn.d.	-	-	-	-	-	-	-	-	not determinedn.d.

API zym

@ref	Control	Alkaline phosphatase	Esterase (C 4)	2-naphtyl caprylateEsterase Lipase (C 8)	Lipase (C 14)	L-leucyl-2-naphthylamideLeucine arylamidase	L-valyl-2-naphthylamideValine arylamidase	L-cystyl-2-naphthylamideCystine arylamidase	Trypsin	alpha- Chymotrypsin	Acid phosphatase	Naphthol-AS-BI-phosphateNaphthol-AS-BI-phosphohydrolase	alpha- Galactosidase	beta- Galactosidase	beta- Glucuronidase	alpha- Glucosidase	beta- Glucosidase	N-acetyl-beta- glucosaminidase	alpha- Mannosidase	alpha- Fucosidase
19860	not determinedn.d.	+	+	+	+	+	+	+	-	-	+	+	-	+	-	-	+	-	+	-
122566	-	-	+	+	+	+	-	-	-	-	+	+	-	-	-	-	+	-	-	-

API biotype100

@ref	ControlQ	D-glucose as carbon sourceGLU	D-fructose as carbon sourceFRU	D-galactose as carbon sourceGAL	D-trehalose as carbon sourceTRE	D-mannose as carbon sourceMNE	L-sorbose as carbon sourceSBE	D-melibiose as carbon sourceMEL	sucrose as carbon sourceSAC	D-raffinose as carbon sourceRAF	maltotriose as carbon sourceMTE	maltose as carbon sourceMAL	lactose as carbon sourceLAC	lactulose as carbon sourceLTE	1-O-methyl-beta-galactopyranoside as carbon sourceMbGa	1-O-methyl-alpha-galactopyranoside as carbon sourceMaGa	D-cellobiose as carbon sourceCEL	gentiobiose as carbon sourceGEN	1-O-methyl-beta-D-glucopyranoside as carbon sourceMbGu	esculin as carbon sourceESC	D-ribose as carbon sourceRIB	L-arabinose as carbon sourceARA	D-xylose as carbon sourceXYL	palatinose as carbon sourcePLE	L-rhamnose as carbon sourceRHA	L-fucose as carbon sourceFUC	D-melezitose as carbon sourceMLZ	D-arabitol as carbon sourceDARL	L-arabitol as carbon sourceLARL	xylitol as carbon sourceXLT	dulcitol as carbon sourceDUL	D-tagatose as carbon sourceTAG	glycerol as carbon sourceGLY	myo-inositol as carbon sourceINO	D-mannitol as carbon sourceMAN	maltitol as carbon sourceMTL	D-turanose as carbon sourceTUR	D-sorbitol as carbon sourceSOR	adonitol as carbon sourceADO	hydroxyquinoline-beta-glucuronide as carbon sourceHBG	D-lyxose as carbon sourceLYX	i-erythritol as carbon sourceERY	1-O-methyl-alpha-D-glucoside as carbon sourceMDG	3-O-methyl-D-glucose as carbon source3MDG	D-saccharate as carbon sourceSAT	mucate as carbon sourceMUC	L-tartrate as carbon sourceLTAT	D-tartrate as carbon sourceDTAT	meso-tartrate as carbon sourceMTAT	D-malate as carbon sourceDMLT	L-malate as carbon sourceLMLT	cis-aconitate as carbon sourceCATE	trans-aconitate as carbon sourceTATE	tricarballylate as carbon sourceTTE	citrate as carbon sourceCIT	D-glucuronate as carbon sourceGRT	D-galacturonate as carbon sourceGAT	2-ketogluconate as carbon source2KG	5-ketogluconate as carbon source5KG	tryptophan as carbon sourceTRY	N-acetyl-D-glucosamine as carbon sourceNAG	D-gluconate as carbon sourceGNT	phenylacetate as carbon sourcePAC	protocatechuate as carbon sourcePAT	4-hydroxybenzoate as carbon sourcepOBE	quinate as carbon sourceQAT	gentisate as carbon sourceGTE	3-hydroxybenzoate as carbon sourcemOBE	benzoate as carbon sourceBAT	3-phenylpropionate as carbon sourcePPAT	m-coumarate as carbon sourceCMT	trigonelline as carbon sourceTGE	betaine as carbon sourceBET	putrescine as carbon sourcePCE	4-aminobutyrate as carbon sourceABT	histamine as carbon sourceHIN	DL-lactate as carbon sourceLAT	caprate as carbon sourceCAP	caprylate as carbon sourceCYT	L-histidine as carbon sourceHIS	succinate as carbon sourceSUC	fumarate as carbon sourceFUM	glutarate as carbon sourceGRE	DL-glycerate as carbon sourceGYT	5-aminovalerate as carbon sourceAVT	ethanolamine as carbon sourceETN	tryptamine as carbon sourceTTN	D-glucosamine as carbon sourceGLN	itaconate as carbon sourceITA	3-hydroxybutyrate as carbon source3OBU	L-aspartate as carbon sourceAPT	L-glutamate as carbon sourceGTT	L-proline as carbon sourcePRO	D-alanine as carbon sourceDALA	L-alanine as carbon sourceLALA	L-serine as carbon sourceSER	malonate as carbon sourceMNT	propionate as carbon sourcePROP	L-tyrosine as carbon sourceTYR	2-ketoglutarate as carbon source2KT
122566	not determinedn.d.	-	+	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	+	+	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	+	-	-	-	-	-	-	-	-	-	-	+	-	-	-	-	-	-	-	-	-	-	-	+	+	-	+	-	-	-	+	+	-	-	+	+	-	-	-	+	-	-	-	+	+	+	-	+	-	-

Isolation, sampling and environmental information

Isolation source categories

Cat1	Cat2	Cat3
#Infection	#Medical device	-
#Infection	#Medical device	#Catheter

Isolation

@ref	Sample type	Geographic location	Country	Country ISO 3 Code	Continent	Latitude	Longitude	Isolation date
11717	catheter tip of centrally located Hickman catheter	Melbourne	Australia	AUS	Australia and Oceania	-37.8082	144.958 -37.8082/144.958
55946	Catheter tip of centrally located Hickman catheter	Melbourne	Australia	AUS	Australia and Oceania
67770	Catheter tip of centrally located Hickman catheter	Melbourne	Australia	AUS	Australia and Oceania
122566	Catheter tip of centrally located Hickman	Melbourne	Australia	AUS	Australia and Oceania			1990

Taxonmaps

69479

Global distribution of 16S sequence NR_042916 (>99% sequence identity) for Mycolicibacterium from Microbeatlas

Aquatic Samples	64
Soil Samples	45
Animal Samples	50
Plant Samples	337
Total Samples	496

Interaction and safety

Risk assessment

@ref	Biosafety level	Biosafety level comment
11717	2	Risk group (German classification) According to TRBA 466
19860	2	Risk group (German classification) According to TRBA 466
122566	1	Risk group (French classification) According to TRBA 466

Sequence information

Genome sequences

@ref	Description	Assembly level	INSDC accession	BV-BRC accession	IMG accession	NCBI tax ID	Score
67770	ASM1239642v1 assembly for Mycolicibacterium septicum DSM 44393 ATCC 700731	contig	GCA_012396425	1341646.5	8110768190	1341646	72.4
67770	Mycobacterium_septicum_DSM44393T assembly for Mycolicibacterium septicum DSM 44393 type strain: DSM 44393	scaffold	GCA_000455325	1341646.3	2551306423	1341646	45.12

16S sequences

@ref	Description	Accession	Length	NCBI tax ID
20218	Mycolicibacterium septicum strain DSM 44393 16S ribosomal RNA gene, partial sequence	AY457070	1483	98668
20218	Mycobacterium septicum strain ATCC 700731 16S ribosomal RNA gene, partial sequence	JQ899228	642	1341646
20218	Mycobacterium septicum strain ATCC 700731 16S ribosomal RNA gene, partial sequence	JQ899250	643	1341646
20218	Mycobacterium septicum strain CIP 106642 16S ribosomal RNA gene, partial sequence	AF547964	540	1341646
20218	Mycobacterium septicum 16S ribosomal RNA gene, partial sequence	AF111809	1491	1341646
11717	Mycolicibacterium septicum DSM 44393 16S ribosomal RNA, partial sequence	NR_042916	1483	1341646

GC content

@ref	GC-content (mol%)	Method
11717	64
67770	66.7	genome sequence analysis
67770	64	thermal denaturation, midpoint method (Tm)

Genome-based predictions

Predictions

Predictions from Deep Learning for Genome Sequence Data. R package version 0.3.1 based on: Mycolicibacterium septicum DSM 44393 type strain: DSM 44393
NCBI: GCA_000455325

@ref	Trait	Model	Prediction	Confidence in %	In training data
125439	spore_formation	BacteriaNetⓘ	no	61.10	no
125439	motility	BacteriaNetⓘ	no	60.40	no
125439	gram_stain	BacteriaNetⓘ	positive	90.20	no
125439	oxygen_tolerance	BacteriaNetⓘ	obligate aerobe	96.00	no

Predictions from bacterial phenotypic traits through improved machine learning using high-quality, curated datasets based on: Mycobacterium septicum DSM 44393
PATRIC: 1341646.3

@ref	Trait	Model	Prediction	Confidence in %	In training data
125438	gram-positive	gram-positiveⓘ	yes	92.22	no
125438	anaerobic	anaerobicⓘ	no	97.59	yes
125438	spore-forming	spore-formingⓘ	no	61.96	no
125438	aerobic	aerobicⓘ	yes	87.78	yes
125438	thermophilic	thermophileⓘ	no	98.00	no
125438	flagellated	motile2+ⓘ	no	91.00	no

Literature

Topic	Title	Authors	Journal	DOI	Year
	Draft Genome Sequence of Mycobacterium neworleansense Strain ATCC 49404T.	Asmar S, Robert C, Croce O, Caputo A, Drancourt M.	Genome Announc	10.1128/genomea.01314-15	2015
	Draft Genome Sequence of Mycobacterium peregrinum Strain CSUR P2098.	Asmar S, Rascovan N, Robert C, Drancourt M.	Genome Announc	10.1128/genomea.01274-15	2015
Phylogeny	Variation among human, veterinary and environmental Mycobacterium chelonae-abscessus complex isolates observed using core genome phylogenomic analysis, targeted gene comparison, and anti-microbial susceptibility patterns.	Fogelson SB, Camus AC, Lorenz WW, Vasireddy R, Vasireddy S, Smith T, Brown-Elliott BA, Wallace RJ, Hasan NA, Reischl U, Sanchez S.	PLoS One	10.1371/journal.pone.0214274	2019
Phylogeny	Phylogenomics and Comparative Genomic Studies Robustly Support Division of the Genus Mycobacterium into an Emended Genus Mycobacterium and Four Novel Genera.	Gupta RS, Lo B, Son J.	Front Microbiol	10.3389/fmicb.2018.00067	2018
	In Vitro Activity of the Sudapyridine (WX-081) against Non-Tuberculous Mycobacteria Isolated in Beijing, China.	Zhu R, Shang Y, Chen S, Xiao H, Ren R, Wang F, Xue Y, Li L, Li Y, Chu N, Huang H.	Microbiol Spectr	10.1128/spectrum.01372-22	2022
	In Vitro Antimicrobial Activities of Tigecycline, Eravacycline, Omadacycline, and Sarecycline against Rapidly Growing Mycobacteria.	Zhang T, Du J, Dong L, Wang F, Zhao L, Jia J, Wang C, Cheng M, Yu X, Huang H.	Microbiol Spectr	10.1128/spectrum.03238-22	2023
Pathogenicity	In vitro activities of tigecycline and 10 other antimicrobials against nonpigmented rapidly growing mycobacteria.	Fernandez-Roblas R, Martin-de-Hijas NZ, Fernandez-Martinez AI, Garcia-Almeida D, Gadea I, Esteban J.	Antimicrob Agents Chemother	10.1128/aac.00695-08	2008
Pathogenicity	In Vitro Activities of Bedaquiline and Delamanid against Nontuberculous Mycobacteria Isolated in Beijing, China.	Yu X, Gao X, Li C, Luo J, Wen S, Zhang T, Ma Y, Dong L, Wang F, Huang H.	Antimicrob Agents Chemother	10.1128/aac.00031-19	2019
	Mycobacterial biomaterials and resources for researchers.	Hazbon MH, Rigouts L, Schito M, Ezewudo M, Kudo T, Itoh T, Ohkuma M, Kiss K, Wu L, Ma J, Hamada M, Strong M, Salfinger M, Daley CL, Nick JA, Lee JS, Rastogi N, Couvin D, Hurtado-Ortiz R, Bizet C, Suresh A, Rodwell T, Albertini A, Lacourciere KA, Deheer-Graham A, Alexander S, Russell JE, Bradford R, Riojas MA.	Pathog Dis	10.1093/femspd/fty042	2018
Phylogeny	Rapid identification of mycobacterial whole cells in solid and liquid culture media by matrix-assisted laser desorption ionization-time of flight mass spectrometry.	Lotz A, Ferroni A, Beretti JL, Dauphin B, Carbonnelle E, Guet-Revillet H, Veziris N, Heym B, Jarlier V, Gaillard JL, Pierre-Audigier C, Frapy E, Berche P, Nassif X, Bille E.	J Clin Microbiol	10.1128/jcm.01397-10	2010
Genetics	Noncontiguous Genome Sequence of Mycobacterium septicum Strain DSM 44393T.	Sassi M, Robert C, Raoult D, Drancourt M	Genome Announc	10.1128/genomeA.00574-13	2013
Phylogeny	Isolation of Mycobacterium septicum from the sputum of a patient suffering from hemoptoic pneumonia.	Adekambi T, Drancourt M	Res Microbiol	10.1016/j.resmic.2005.10.006	2005
Phylogeny	Mycobacterium septicum sp. nov., a new rapidly growing species associated with catheter-related bacteraemia.	Schinsky MF, McNeil MM, Whitney AM, Steigerwalt AG, Lasker BA, Floyd MM, Hogg GG, Brenner DJ, Brown JM	Int J Syst Evol Microbiol	10.1099/00207713-50-2-575	2000

References

#11717	Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 44393
#19860	Wink, J.: Compendium of Actinobacteria. HZI-Helmholtz-Centre for Infection Research, Braunschweig .
#20215	Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )
#20218	Verslyppe, B., De Smet, W., De Baets, B., De Vos, P., Dawyndt P.: StrainInfo introduces electronic passports for microorganisms.. Syst Appl Microbiol. 37: 42 - 50 2014 ( DOI 10.1016/j.syapm.2013.11.002 , PubMed 24321274 )
#36370	; Curators of the CIP;
#55946	Culture Collection University of Gothenburg (CCUG) ; Curators of the CCUG; CCUG 43574
#67770	Japan Collection of Microorganism (JCM) ; Curators of the JCM;
#68379	Automatically annotated from API Coryne .
#68382	Automatically annotated from API zym .
#69479	João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta .
#122566	Collection of Institut Pasteur ; Curators of the CIP; CIP 106642
#125438	Julia Koblitz, Lorenz Christian Reimer, Rüdiger Pukall, Jörg Overmann: Predicting bacterial phenotypic traits through improved machine learning using high-quality, curated datasets. 2024 ( DOI 10.1101/2024.08.12.607695 )
#125439	Philipp Münch, René Mreches, Martin Binder, Hüseyin Anil Gündüz, Xiao-Yin To, Alice McHardy: deepG: Deep Learning for Genome Sequence Data. R package version 0.3.1 .
#126262	A. Lissin, I. Schober, J. F. Witte, H. Lüken, A. Podstawka, J. Koblitz, B. Bunk, P. Dawyndt, P. Vandamme, P. de Vos, J. Overmann, L. C. Reimer: StrainInfo—the central database for linked microbial strain identifiers. ( DOI 10.1093/database/baaf059 )

Rate our new design

Content

About us

Mycobacterium septicum (DSM 44393, ATCC 700731, CCUG 43574)

Name and taxonomic classification

Morphology

Cell morphology

Colony morphology

Culture and growth conditions

Culture medium

Culture temp

Physiology and metabolism

Oxygen tolerance

Metabolite utilization

Metabolite production

Enzymes

Fatty acid profile

API coryne

API zym

API biotype100

Isolation, sampling and environmental information

Isolation source categories

Isolation

Taxonmaps

Interaction and safety

Risk assessment

Sequence information

Genome sequences

Genome browser: GCA_012396425

16S sequences

GC content

Genome-based predictions

Predictions

Literature

Literature

References

BacDive

Help

Social Media