Name: Mycobacterium porcinum MF-155
Creator: BacDive
License: http://creativecommons.org/licenses/by-nc/4.0/

Strain identifier

BacDive ID: 8472

Type strain:

Species: Mycobacterium porcinum

Strain Designation: MF-155, W6238

Culture col. no.: CCUG 47583, CIP 107826, DSM 44678, ATCC BAA-329

Strain history: CIP <- 2003, G. Goolsby, CDC, Atlanta, USA: strain W6238, "Mycobacterium concordensi" <- R.J. Wallace

NCBI tax ID(s): 39693 (species)

SI-ID 100106

ATCC BAA-329, DSM 44678, CIP 107826

Other strains from Mycobacterium porcinum

M. porcinum E10241-1, DSM 44242, ATCC 33776, ... (type strain)

Section

Mycobacterium porcinum MF-155 is an aerobe, mesophilic, Gram-negative human pathogen of the family Mycobacteriaceae.

Gram-negative
motile
rod-shaped
aerobe
human pathogen
mesophilic
16S sequence
Bacteria

Information on the name and the taxonomic classification. Name and taxonomic classification

	Last LPSN update	14-12-2023 (DD-MM-YYYY)
	Domain	"Bacteria"
	Phylum	*Actinomycetota*
	Class	*Actinomycetes*
	Order	*Mycobacteriales*
	Family	*Mycobacteriaceae*
	Genus	*Mycobacterium*
	Species	**Mycobacterium porcinum**
	Full Scientific Name (LPSN)	Mycobacterium porcinum Tsukamura et al. 1983

Synonym

Mycolicibacterium porcinum

Information on morphological and physiological properties Morphology

[Ref.: #122565]	Gram stain	negative

[Ref.: #122565]	Cell shape	rod-shaped

[Ref.: #122565]	Motility	yes

[Ref.: #57766]

Incubation period

2 days

Information on culture and growth conditions Culture and growth conditions

[Ref.: #11993]

Culture medium

MIDDLEBROOK MEDIUM (DSMZ Medium 645)

[Ref.: #11993]

Culture medium growth

[Ref.: #11993]

Culture medium link

Medium recipe at MediaDive

[Ref.: #11993]

Culture medium composition

expand / minimize

[Ref.: #36650]

Culture medium

MEDIUM 55 - for Mycobacterium

[Ref.: #36650]

Culture medium growth

[Ref.: #122565]

Culture medium

CIP Medium 72

[Ref.: #122565]

Culture medium growth

[Ref.: #122565]

Culture medium link

Medium recipe provided by DSMZ

[Ref.: #122565]

Culture medium

CIP Medium 55

[Ref.: #122565]

Culture medium growth

[Ref.: #122565]

Culture medium link

Medium recipe provided by DSMZ

	Kind of temperature		Temperature
[Ref.: #11993]		growth	37 °C
[Ref.: #36650]		growth	37 °C
[Ref.: #57766]		growth	37 °C
[Ref.: #122565]		growth	10-30 °C
[Ref.: #122565]	no	growth	45 °C

[Ref.: #11993]	Temperature range	mesophilic
[Ref.: #36650]	Temperature range	mesophilic
[Ref.: #57766]	Temperature range	mesophilic
[Ref.: #122565]	Temperature range	thermophilic

Information on physiology and metabolism Physiology and metabolism

[Ref.: #57766]

Oxygen tolerance

aerobe

[Ref.: #122565]

Ability of spore formation

	Metabolite	Utilization activity	Kind of utilization tested
[Ref.: #122565]	hippurate ChEBI	+	hydrolysis
[Ref.: #122565]	nitrate ChEBI	+	reduction
[Ref.: #122565]	nitrite ChEBI	-	reduction

	Antibiotica	Metabolite	Antibiotic sensitivity	Antibiotic resistance
[Ref.: #122565]		0129 (2,4-Diamino-6,7-di-iso-propylpteridine phosphate)	yes	no

	Metabolite production	Metabolite	Production
[Ref.: #122565]		indole ChEBI	no

	Enzyme	Enzyme activity	EC number
[Ref.: #68382]	acid phosphatase	+	3.1.3.2	* from API zym
[Ref.: #68382]	alkaline phosphatase	-	3.1.3.1	* from API zym
[Ref.: #68382]	alpha-chymotrypsin	-	3.4.21.1	* from API zym
[Ref.: #68382]	alpha-fucosidase	-	3.2.1.51	* from API zym
[Ref.: #68382]	alpha-galactosidase	-	3.2.1.22	* from API zym
[Ref.: #68382]	alpha-glucosidase	-	3.2.1.20	* from API zym
[Ref.: #68382]	alpha-mannosidase	-	3.2.1.24	* from API zym
[Ref.: #122565]	amylase	-
[Ref.: #122565]	beta-galactosidase	+	3.2.1.23
[Ref.: #68382]	beta-galactosidase	-	3.2.1.23	* from API zym
[Ref.: #68382]	beta-glucosidase	+	3.2.1.21	* from API zym
[Ref.: #68382]	beta-glucuronidase	-	3.2.1.31	* from API zym
[Ref.: #122565]	caseinase	-	3.4.21.50
[Ref.: #122565]	catalase	+	1.11.1.6
[Ref.: #68382]	cystine arylamidase	-	3.4.11.3	* from API zym
[Ref.: #122565]	DNase	+
[Ref.: #68382]	esterase (C 4)	-		* from API zym
[Ref.: #68382]	esterase lipase (C 8)	-		* from API zym
[Ref.: #122565]	gamma-glutamyltransferase	+	2.3.2.2
[Ref.: #122565]	gelatinase	-
[Ref.: #122565]	lecithinase	-
[Ref.: #68382]	leucine arylamidase	+	3.4.11.1	* from API zym
[Ref.: #122565]	lipase	-
[Ref.: #68382]	lipase (C 14)	-		* from API zym
[Ref.: #68382]	N-acetyl-beta-glucosaminidase	-	3.2.1.52	* from API zym
[Ref.: #68382]	naphthol-AS-BI-phosphohydrolase	+		* from API zym
[Ref.: #122565]	oxidase	-
[Ref.: #122565]	protease	-
[Ref.: #68382]	trypsin	-	3.4.21.4	* from API zym
[Ref.: #122565]	tween esterase	+
[Ref.: #122565]	urease	+	3.5.1.5
[Ref.: #68382]	valine arylamidase	-		* from API zym
	Only first 10 entries are displayed. Click here to see all.

Fatty acid profile

Metadata FA analysis

Reference

[Ref.: #57766]

Fatty acid	Percentage	ECL
C16:0	35	16
C18:1 ω9c	34	17.769
C16:1 ω7c/C15:0 ISO 2OH	10	15.85
C14:0	7.9	14
C16:1 ω7c	3.4	15.819
TBSA 10Me18:0	2.9	18.392
C18:0	2.3	18
C18:2 ω6,9c/C18:0 ANTE	1.9	17.724
C16:1 ω9c	0.7	15.774
C20:1 ω9c	0.6	19.77
C20:0	0.4	20
C17:1 ω8c	0.4	16.792
C12:0	0.3	12
C13:0 ISO 2OH	0.2	13.814

API® Biotype100:

Note that the displayed test results represent raw data and therefore may deviate!

	API ID	ControlQ	D-glucose as carbon sourceGLU	D-fructose as carbon sourceFRU	D-galactose as carbon sourceGAL	D-trehalose as carbon sourceTRE	D-mannose as carbon sourceMNE	L-sorbose as carbon sourceSBE	D-melibiose as carbon sourceMEL	sucrose as carbon sourceSAC	D-raffinose as carbon sourceRAF	maltotriose as carbon sourceMTE	maltose as carbon sourceMAL	lactose as carbon sourceLAC	lactulose as carbon sourceLTE	1-O-methyl-beta-galactopyranoside as carbon sourceMbGa	1-O-methyl-alpha-galactopyranoside as carbon sourceMaGa	D-cellobiose as carbon sourceCEL	gentiobiose as carbon sourceGEN	1-O-methyl-beta-D-glucopyranoside as carbon sourceMbGu	esculin as carbon sourceESC	D-ribose as carbon sourceRIB	L-arabinose as carbon sourceARA	D-xylose as carbon sourceXYL	palatinose as carbon sourcePLE	L-rhamnose as carbon sourceRHA	L-fucose as carbon sourceFUC	D-melezitose as carbon sourceMLZ	D-arabitol as carbon sourceDARL	L-arabitol as carbon sourceLARL	xylitol as carbon sourceXLT	dulcitol as carbon sourceDUL	D-tagatose as carbon sourceTAG	glycerol as carbon sourceGLY	myo-inositol as carbon sourceINO	D-mannitol as carbon sourceMAN	maltitol as carbon sourceMTL	D-turanose as carbon sourceTUR	D-sorbitol as carbon sourceSOR	adonitol as carbon sourceADO	hydroxyquinoline-beta-glucuronide as carbon sourceHBG	D-lyxose as carbon sourceLYX	i-erythritol as carbon sourceERY	1-O-methyl-alpha-D-glucoside as carbon sourceMDG	3-O-methyl-D-glucose as carbon source3MDG	D-saccharate as carbon sourceSAT	mucate as carbon sourceMUC	L-tartrate as carbon sourceLTAT	D-tartrate as carbon sourceDTAT	meso-tartrate as carbon sourceMTAT	D-malate as carbon sourceDMLT	L-malate as carbon sourceLMLT	cis-aconitate as carbon sourceCATE	trans-aconitate as carbon sourceTATE	tricarballylate as carbon sourceTTE	citrate as carbon sourceCIT	D-glucuronate as carbon sourceGRT	D-galacturonate as carbon sourceGAT	2-ketogluconate as carbon source2KG	5-ketogluconate as carbon source5KG	tryptophan as carbon sourceTRY	N-acetyl-D-glucosamine as carbon sourceNAG	D-gluconate as carbon sourceGNT	phenylacetate as carbon sourcePAC	protocatechuate as carbon sourcePAT	4-hydroxybenzoate as carbon sourcepOBE	quinate as carbon sourceQAT	gentisate as carbon sourceGTE	3-hydroxybenzoate as carbon sourcemOBE	benzoate as carbon sourceBAT	3-phenylpropionate as carbon sourcePPAT	m-coumarate as carbon sourceCMT	trigonelline as carbon sourceTGE	betaine as carbon sourceBET	putrescine as carbon sourcePCE	4-aminobutyrate as carbon sourceABT	histamine as carbon sourceHIN	DL-lactate as carbon sourceLAT	caprate as carbon sourceCAP	caprylate as carbon sourceCYT	L-histidine as carbon sourceHIS	succinate as carbon sourceSUC	fumarate as carbon sourceFUM	glutarate as carbon sourceGRE	DL-glycerate as carbon sourceGYT	5-aminovalerate as carbon sourceAVT	ethanolamine as carbon sourceETN	tryptamine as carbon sourceTTN	D-glucosamine as carbon sourceGLN	itaconate as carbon sourceITA	3-hydroxybutyrate as carbon source3OBU	L-aspartate as carbon sourceAPT	L-glutamate as carbon sourceGTT	L-proline as carbon sourcePRO	D-alanine as carbon sourceDALA	L-alanine as carbon sourceLALA	L-serine as carbon sourceSER	malonate as carbon sourceMNT	propionate as carbon sourcePROP	L-tyrosine as carbon sourceTYR	2-ketoglutarate as carbon source2KT
[Ref.: #122565]	2455	not determinedn.d.	-	-	-	+	-	-	-	-	-	-	-	-	-	-	-	-	-	-	+	-	-	-	-	-	-	-	-	-	-	-	-	+	+	+	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	+	-	-	-	-	-	-	-	-	-	-	+	-	-	-	-	-	-	+	-	-	-	-	+	-	-	-	-	+	-	-	+	-	-	-	+	-	-	-	+	-	-	-	-	-	-	-	+	-	-

API® zym:

Note that the displayed test results represent raw data and therefore may deviate!

	API ID	Control	2-naphthyl phosphateAlkaline phosphatase	2-naphthyl butyrateEsterase (C 4)	2-naphtyl caprylateEsterase Lipase (C 8)	2-naphthyl myristateLipase (C 14)	L-leucyl-2-naphthylamideLeucine arylamidase	L-valyl-2-naphthylamideValine arylamidase	L-cystyl-2-naphthylamideCystine arylamidase	N-benzoyl-DL-arginine-2-naphthylamideTrypsin	N-glutaryl-phenylalanine-2-naphthylamidealpha- Chymotrypsin	2-naphthyl phosphateAcid phosphatase	Naphthol-AS-BI-phosphateNaphthol-AS-BI-phosphohydrolase	6-Br-2-naphthyl-alphaD-galactpyranosidealpha- Galactosidase	2-naphthyl-betaD-galactpyranosidebeta- Galactosidase	Naphthol-AS-BI-betaD-glucuronidebeta- Glucuronidase	2-naphthyl-alphaD-glucopyranosidealpha- Glucosidase	6-Br-2-naphthyl-betaD-glucopyranosidebeta- Glucosidase	1-naphthyl-N-acetyl-betaD-glucosaminideN-acetyl-beta- glucosaminidase	6-Br-2-naphthyl-alphaD-mannopyranosidealpha- Mannosidase	2-naphthyl-alphaL-fucopyranosidealpha- Fucosidase
[Ref.: #122565]	10680	-	-	-	-	-	+	-	-	-	-	+	+	-	-	-	-	+	-	-	-

Information on isolation source, the sampling and environmental conditions Isolation, sampling and environmental information

[Ref.: #57766]	Sample type/isolated from	Source not available
[Ref.: #57766]	Geographic location (country and/or sea, region)	NH,Concord
[Ref.: #57766]	Country	USA
[Ref.: #57766]	Country ISO 3 Code	USA
[Ref.: #57766]	Continent	North America

[Ref.: #11993]	Geographic location (country and/or sea, region)	N. H., Concord
[Ref.: #11993]	Country	USA
[Ref.: #11993]	Country ISO 3 Code	USA
[Ref.: #11993]	Continent	North America

[Ref.: #122565]	Country	United States of America
[Ref.: #122565]	Country ISO 3 Code	USA
[Ref.: #122565]	Continent	North America
* marker position based on {}

[Ref.: #69479]

Global distribution of 16S sequence AY012576 (>99% sequence identity) for Mycolicibacterium from Microbeatlas

Aquatic Samples	64
Soil Samples	45
Animal Samples	50
Plant Samples	337
Total Samples	496

Information on possible application of the strain and its possible interaction with e.g. potential hosts Safety information

[Ref.: #11993]	Pathogenicity (human)	yes
[Ref.: #11993]	Pathogenicity (animal)	yes
[Ref.: #11993]	Biosafety level	2	Risk group (German classification) According to TRBA 466
[Ref.: #122565]	Biosafety level	1	Risk group (French classification)

Information on genomic background e.g. entries in nucleic sequence databass Sequence information

16S Sequence information:

	Sequence accession description	Seq. accession number	Sequence length (bp)	Sequence database	Associated NCBI tax ID
[Ref.: #11993]	Mycobacterium septicum strain W6238 16S ribosomal RNA gene, partial sequence	AY012576	1487	ENA	98668 tax ID

[Ref.: #11993]

GC-content

64 mol%

Availability in culture collections External links

[Ref.: #11993]

Culture collection no.

CCUG 47583, CIP 107826, DSM 44678, ATCC BAA-329

[Ref.: #77867]

SI-ID 100106

References

#11993

Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 44678

#20215

Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )

#36650 ; Curators of the CIP;
#57766 Culture Collection University of Gothenburg (CCUG) ; Curators of the CCUG; CCUG 47583

#68382

Automatically annotated from API zym .

#69479

João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta .

#77867

Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.: StrainInfo: A central database for resolving microbial strain identifiers . ( DOI 10.60712/SI-ID100106.1 )

#122565 Collection of Institut Pasteur ; Curators of the CIP; CIP 107826
* These data were automatically processed and therefore are not curated

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