Mycobacterium komossense (DSM 44078, ATCC 33013, CIP 105293)

Name: Mycobacterium komossense (DSM 44078, ATCC 33013, CIP 105293)
Creator: BacDive
License: http://creativecommons.org/licenses/by/4.0/

BacDive ID 8438

Type strain

Strain Designation Ko 2

Culture col. no. DSM 44078 ATCC 33013 CIP 105293 Ko 2 HKI 0047 1 more

NCBI tax ID(s) 1779

Special Collections DSMZ CIP JMRC

History DSMZ <- S. Rüsch-Gerdes <- ATCC <- J. Kazda, Ko 2

Links

Mycobacterium komossense Ko 2 is a bacterium that was isolated from Spaghnum moss.

genome sequence 16S sequence Bacteria

Name and taxonomic classification

SI-ID 13216

LMG 19250,ATCC 33013,DSM 44078,CIP 105293,CECT 3034,JCM 12408,HAMBI 2279,HAMBI 2280,CNCTC 7277

@ref 20215

Last LPSN update 2026-05-29 08:26:52

Domain Bacteria

Phylum Actinomycetota

Class Actinomycetes

Order Mycobacteriales

Family Mycobacteriaceae

Genus Mycobacterium

Species Mycobacterium komossense

Full scientific name Mycobacterium komossense Kazda and Müller 1979 (Approved Lists 1980)

Synonyms (1)

Mycolicibacterium komossense

Morphology

Cell morphology

@ref	Motility	Confidence
125438		90

Culture and growth conditions

Culture medium

@ref	Name	Growth	Medium link	Composition
11477	MIDDLEBROOK MEDIUM (DSMZ Medium 645)		Medium recipe at MediaDive	Name: MIDDLEBROOK MEDIUM (DSMZ Medium 645) Composition: Bacto Middlebrook 7H10 agar 20.9945 g/l Glycerol Distilled water
11477	LÖWENSTEIN-JENSEN MEDIUM (DSMZ Medium 354)		Medium recipe at MediaDive	Name: LÖWENSTEIN-JENSEN MEDIUM (DSMZ Medium 354) Composition: Potato flour 18.6104 g/l L-Asparagin 2.23325 g/l KH2PO4 1.55087 g/l Mg-citrate 0.372208 g/l Malachite green 0.248139 g/l MgSO4 0.148883 g/l Glycerol Fresh egg mixture Distilled water

Culture temp

@ref	Growth	Type	Temperature (°C)
11477	positive	growth	37

Physiology and metabolism

Isolation, sampling and environmental information

Isolation source categories

Cat1	Cat2	Cat3
#Host	#Plants	#Peat moss

Isolation

@ref	Sample type	Host species	Geographic location	Country	Country ISO 3 Code	Continent
11477	Spaghnum moss	Sphagnum	South Sweden, Komosse swamp	Sweden	SWE	Europe

Interaction and safety

Risk assessment

@ref	Biosafety level	Biosafety level comment
11477	1	Risk group (German classification) According to TRBA 466

Sequence information

Genome sequences

@ref	Description	Assembly level	INSDC accession	BV-BRC accession	IMG accession	NCBI tax ID	Score
66792	ASM2582260v1 assembly for Mycolicibacterium komossense DSM 44078	scaffold	GCA_025822605	1779.10	8047388944	1779	63.37

16S sequences

@ref	Description	Accession	Length	NCBI tax ID
20218	M.komossense 16S ribosomal RNA gene	M59284	146	1779
20218	M.komossense 16S ribosomal RNA, part	X55591	1462	1779
20218	Mycobacterium komossense 16S ribosomal RNA gene, partial sequence	AY438077	540	1779

Genome-based predictions

Predictions

Predictions from bacterial phenotypic traits through improved machine learning using high-quality, curated datasets based on: Mycolicibacterium komossense DSM 44078
NCBI: GCA_025822605.1

@ref	Trait	Model	Prediction	Confidence in %	In training data
125438	gram-positive	gram-positiveⓘ	yes	89.16	no
125438	anaerobic	anaerobicⓘ	no	96.44	no
125438	aerobic	aerobicⓘ	yes	87.38	no
125438	spore-forming	spore-formingⓘ	no	55.81	no
125438	thermophilic	thermophileⓘ	no	92.50	no
125438	flagellated	motile2+ⓘ	no	90.00	no

Literature

Topic	Title	Authors	Journal	DOI	Year
Phylogeny	Phylogenomics and Comparative Genomic Studies Robustly Support Division of the Genus Mycobacterium into an Emended Genus Mycobacterium and Four Novel Genera.	Gupta RS, Lo B, Son J.	Front Microbiol	10.3389/fmicb.2018.00067	2018
Pathogenicity	Can phenotypic data complement our understanding of antimycobacterial effects for drug combinations?	Kloprogge F, Hammond R, Copas A, Gillespie SH, Della Pasqua O.	J Antimicrob Chemother	10.1093/jac/dkz369	2019
	In vitro Antimicrobial Activity Comparison of Linezolid, Tedizolid, Sutezolid and Delpazolid Against Slowly Growing Mycobacteria Isolated in Beijing, China.	Yu X, Huo F, Wang F, Wen S, Jiang G, Xue Y, Dong L, Zhao L, Zhu R, Huang H.	Infect Drug Resist	10.2147/idr.s332835	2021
	Implications of drug-induced phenotypical resistance: Is isoniazid radicalizing M. tuberculosis?	Hammond R, Kloprogge F, Pasqua OD, Gillespie SH.	Front Antibiot	10.3389/frabi.2022.928365	2022
Metabolism	Two new Mycobacterium strains and their role in toluene degradation in a contaminated stream.	Tay ST, Hemond HF, Polz MF, Polz MF, Cavanaugh CM, Dejesus I, Krumholz LR.	Appl Environ Microbiol	10.1128/aem.64.5.1715-1720.1998	1998
Enzymology	Group-specific small-subunit rRNA hybridization probes to characterize filamentous foaming in activated sludge systems.	de los Reyes FL, Ritter W, Raskin L.	Appl Environ Microbiol	10.1128/aem.63.3.1107-1117.1997	1997
	Compilation of small ribosomal subunit RNA structures.	Neefs JM, Van de Peer Y, De Rijk P, Chapelle S, De Wachter R.	Nucleic Acids Res	10.1093/nar/21.13.3025	1993

References

#11477	Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 44078
#20215	Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )
#20216	Curators of the JMRC: Jena Microbial Resource Collection (JMRC):
#20218	Verslyppe, B., De Smet, W., De Baets, B., De Vos, P., Dawyndt P.: StrainInfo introduces electronic passports for microorganisms.. Syst Appl Microbiol. 37: 42 - 50 2014 ( DOI 10.1016/j.syapm.2013.11.002 , PubMed 24321274 )
#66792	Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .
#125438	Julia Koblitz, Lorenz Christian Reimer, Rüdiger Pukall, Jörg Overmann: Predicting bacterial phenotypic traits through improved machine learning using high-quality, curated datasets. 2024 ( DOI 10.1101/2024.08.12.607695 )
#126262	A. Lissin, I. Schober, J. F. Witte, H. Lüken, A. Podstawka, J. Koblitz, B. Bunk, P. Dawyndt, P. Vandamme, P. de Vos, J. Overmann, L. C. Reimer: StrainInfo—the central database for linked microbial strain identifiers. ( DOI 10.1093/database/baaf059 )

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Mycobacterium komossense (DSM 44078, ATCC 33013, CIP 105293)

Name and taxonomic classification

Morphology

Cell morphology

Culture and growth conditions

Culture medium

Culture temp

Physiology and metabolism

Isolation, sampling and environmental information

Isolation source categories

Isolation

Interaction and safety

Risk assessment

Sequence information

Genome sequences

Genome browser: GCA_025822605

16S sequences

Genome-based predictions

Predictions

Literature

Literature

References

BacDive

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