Mycobacterium duvalii 141180001 is a microaerophile, mesophilic, rod-shaped prokaryote that was isolated from cases of leprosy.
rod-shaped microaerophile mesophilic genome sequence 16S sequence| @ref 20215 |
|
|
| Domain Bacillati |
| Phylum Actinomycetota |
| Class Actinomycetes |
| Order Mycobacteriales |
| Family Mycobacteriaceae |
| Genus Mycobacterium |
| Species Mycobacterium duvalii |
| Full scientific name Mycobacterium duvalii Stanford and Gunthorpe 1971 (Approved Lists 1980) |
| Synonyms (1) |
| BacDive ID | Other strains from Mycobacterium duvalii (4) | Type strain |
|---|---|---|
| 8409 | M. duvalii DSM 43543, SN 3000 | |
| 8410 | M. duvalii DSM 43544, SN 3001 | |
| 8411 | M. duvalii DSM 43545, SN 3002 | |
| 153581 | M. duvalii CCUG 50278 |
| @ref | Name | Growth | Medium link | Composition | |
|---|---|---|---|---|---|
| 11619 | MYCOBACTERIUM MEDIUM (DSMZ Medium 219) | Medium recipe at MediaDive | Name: MYCOBACTERIUM MEDIUM (DSMZ Medium 219) Composition: Agar 20.0 g/l Na2HPO4 x 12 H2O 2.5 g/l Yeast extract 2.0 g/l Proteose peptone no. 3 2.0 g/l Casein peptone 2.0 g/l Sodium citrate 1.5 g/l KH2PO4 1.0 g/l MgSO4 x 7 H2O 0.6 g/l Tween 0.5 g/l Glycerol Distilled water | ||
| 11619 | MIDDLEBROOK MEDIUM (DSMZ Medium 645) | Medium recipe at MediaDive | Name: MIDDLEBROOK MEDIUM (DSMZ Medium 645) Composition: Bacto Middlebrook 7H10 agar 20.9945 g/l Glycerol Distilled water | ||
| 20030 | MB7H10 | Name: Middlebrook 7H10 (MB7H10) Broth Base Composition: amount in percent Middlebrook 7H10 Agar 1.9% Glycerol 0.5% OADC-Enrichment in ml (NL5633) 10ml Comments: Add broth base and glycerol to ddh2O. Adjust volumes. Autoclave. Cool to 42°C. Add OADC-stock. Sterilisation: 20 minutes Temperature:121°C PH before: PH after: Biological details Culture type: suitable for: Mycobacteria OADC stock solution old broth-name: OADC-Stock Composition: Bovine Serum Albumin, fraction V 5 % 1% Oleic Acid in 0.2N NaOH 5ml Glucose 2 % NaCl 0.85 % Comments: Melt 1% Oleic Acid in 65°C water bath. Dissolve all ingredients in 700ml of ddH2O. Adjust volume to 1L. Filter sterilize and store at 4°C. -To make 1% Oleic Acid in 0.2N NaOH: Dissolve 5g oleic acid (ampule) in 500ml 0.2N NaOH (300ml ddH2O + 20ml NaOH + adjust volume to 500ml). Heat solution to 55°C for oleic acid to melt. Store at -20°C in 50ml aliquots. There is no need to sterilize this. Sterilisation: 20 minutes Temperature:121°C PH before: PH after: Biological details Culture type: suitable for: Mycobacteria | |||
| 20030 | MB7H11 | Name: Middlebrook 7H11 (MB7H11) Broth Base Composition: Middlebrook 7H11 Agar 2% Glycerol 0.5% OADC-Enrichment 10ml Comments: Add broth base and glycerol to ddH2O. Adjust volumes. Autoclave. Cool to 42°C. Add OADC-Stock. Sterilisation: 20 minutes Temperature:121°C PH before: PH after: Biological details Culture type: suitable for: Mycobacteria OADC stock solution old broth-name: OADC-Stock Composition: Bovine Serum Albumin, fraction V 5 % 1% Oleic Acid in 0.2N NaOH 5ml Glucose 2 % NaCl 0.85 % Comments: Melt 1% Oleic Acid in 65°C water bath. Dissolve all ingredients in 700ml of ddH2O. Adjust volume to 1L. Filter sterilize and store at 4°C. -To make 1% Oleic Acid in 0.2N NaOH: Dissolve 5g oleic acid (ampule) in 500ml 0.2N NaOH (300ml ddH2O + 20ml NaOH + adjust volume to 500ml). Heat solution to 55°C for oleic acid to melt. Store at -20°C in 50ml aliquots. There is no need to sterilize this. Sterilisation: 20 minutes Temperature:121°C PH before: PH after: Biological details Culture type: suitable for: Mycobacteria | |||
| 20030 | 5006 | Medium: 5006 Name: Composition (g/l) Sucrose 3,0 Dextrin 15,0 Meat extract 1,0 Yeast extract 2,0 Tryptone soy broth (Oxoid) 5,0 NaCl 0,5 K2HPO4 0,5 MgSO4 x 7 H2O 0,5 FeSO4 x 7 H2O 0,01 Agar 20,0 Preparation: Sterilisation: 20 minutes at 121°C pH before sterilisation: 7,3 Usage: Maintenance Organisms: All Actinomycetes | |||
| 36324 | MEDIUM 55 - for Mycobacterium | ||||
| 118984 | CIP Medium 55 | Medium recipe at CIP |
| @ref | Chebi-ID | Metabolite | Utilization activity | Kind of utilization tested | |
|---|---|---|---|---|---|
| 118984 | 16947 ChEBI | citrate | - | carbon source | |
| 68379 | 17634 ChEBI | D-glucose | - | fermentation | from API Coryne |
| 68379 | 16899 ChEBI | D-mannitol | - | fermentation | from API Coryne |
| 68379 | 16988 ChEBI | D-ribose | - | fermentation | from API Coryne |
| 68379 | 65327 ChEBI | D-xylose | - | fermentation | from API Coryne |
| 68379 | 4853 ChEBI | esculin | - | hydrolysis | from API Coryne |
| 68379 | 5291 ChEBI | gelatin | - | hydrolysis | from API Coryne |
| 68379 | 28087 ChEBI | glycogen | - | fermentation | from API Coryne |
| 118984 | 606565 ChEBI | hippurate | - | hydrolysis | |
| 68379 | 17716 ChEBI | lactose | - | fermentation | from API Coryne |
| 68379 | 17306 ChEBI | maltose | - | fermentation | from API Coryne |
| 118984 | 17632 ChEBI | nitrate | + | reduction | |
| 118984 | 17632 ChEBI | nitrate | - | respiration | |
| 68379 | 17632 ChEBI | nitrate | + | reduction | from API Coryne |
| 118984 | 16301 ChEBI | nitrite | - | reduction | |
| 118984 | 132112 ChEBI | sodium thiosulfate | - | builds gas from | |
| 68379 | 17992 ChEBI | sucrose | - | fermentation | from API Coryne |
| 68379 | 16199 ChEBI | urea | - | hydrolysis | from API Coryne |
| @ref | Value | Activity | Ec | |
|---|---|---|---|---|
| 68382 | acid phosphatase | + | 3.1.3.2 | from API zym |
| 118984 | alcohol dehydrogenase | - | 1.1.1.1 | |
| 68382 | alkaline phosphatase | - | 3.1.3.1 | from API zym |
| 68379 | alkaline phosphatase | - | 3.1.3.1 | from API Coryne |
| 68382 | alpha-fucosidase | - | 3.2.1.51 | from API zym |
| 68382 | alpha-galactosidase | - | 3.2.1.22 | from API zym |
| 68382 | alpha-glucosidase | + | 3.2.1.20 | from API zym |
| 68379 | alpha-glucosidase | - | 3.2.1.20 | from API Coryne |
| 68382 | alpha-mannosidase | - | 3.2.1.24 | from API zym |
| 118984 | amylase | - | ||
| 68382 | beta-galactosidase | - | 3.2.1.23 | from API zym |
| 118984 | beta-galactosidase | - | 3.2.1.23 | |
| 68379 | beta-galactosidase | + | 3.2.1.23 | from API Coryne |
| 68379 | beta-glucosidase | - | 3.2.1.21 | from API Coryne |
| 68382 | beta-glucosidase | - | 3.2.1.21 | from API zym |
| 68382 | beta-glucuronidase | - | 3.2.1.31 | from API zym |
| 68379 | beta-glucuronidase | - | 3.2.1.31 | from API Coryne |
| 118984 | caseinase | - | 3.4.21.50 | |
| 118984 | catalase | + | 1.11.1.6 | |
| 68382 | esterase (C 4) | + | from API zym | |
| 68382 | esterase lipase (C 8) | + | from API zym | |
| 118984 | gelatinase | - | ||
| 68379 | gelatinase | - | from API Coryne | |
| 68382 | leucine arylamidase | + | 3.4.11.1 | from API zym |
| 118984 | lipase | + | ||
| 118984 | lysine decarboxylase | - | 4.1.1.18 | |
| 68382 | N-acetyl-beta-glucosaminidase | - | 3.2.1.52 | from API zym |
| 68379 | N-acetyl-beta-glucosaminidase | - | 3.2.1.52 | from API Coryne |
| 118984 | ornithine decarboxylase | - | 4.1.1.17 | |
| 118984 | oxidase | - | ||
| 68379 | pyrazinamidase | - | 3.5.1.B15 | from API Coryne |
| 68379 | pyrrolidonyl arylamidase | + | 3.4.19.3 | from API Coryne |
| 118984 | tryptophan deaminase | - | ||
| 118984 | urease | + | 3.5.1.5 | |
| 68379 | urease | - | 3.5.1.5 | from API Coryne |
| @ref | Description | Assembly level | INSDC accession | BV-BRC accession | IMG accession | NCBI tax ID | Score | |
|---|---|---|---|---|---|---|---|---|
| 66792 | ASM1072664v1 assembly for Mycolicibacterium duvalii JCM 6396 | complete | 39688 | 99.07 | ||||
| 66792 | ASM2582300v1 assembly for Mycolicibacterium duvalii DSM 44244 | scaffold | 39688 | 69.25 |
| @ref | Trait | Model | Prediction | Confidence in % | In training data |
|---|---|---|---|---|---|
| 125439 | spore_formation | BacteriaNetⓘ | no | 51.80 | no |
| 125439 | motility | BacteriaNetⓘ | no | 78.50 | no |
| 125439 | gram_stain | BacteriaNetⓘ | positive | 98.60 | no |
| 125439 | oxygen_tolerance | BacteriaNetⓘ | obligate aerobe | 99.30 | no |
| @ref | Trait | Model | Prediction | Confidence in % | In training data |
|---|---|---|---|---|---|
| 125438 | gram-positive | gram-positiveⓘ | yes | 93.71 | no |
| 125438 | anaerobic | anaerobicⓘ | no | 97.89 | yes |
| 125438 | aerobic | aerobicⓘ | yes | 87.67 | no |
| 125438 | spore-forming | spore-formingⓘ | no | 63.11 | no |
| 125438 | thermophilic | thermophileⓘ | no | 96.47 | yes |
| 125438 | flagellated | motile2+ⓘ | no | 89.37 | no |
| Title | Authors | Journal | DOI | Year | |
|---|---|---|---|---|---|
| A novel real-time PCR assay for specific detection and quantification of Mycobacterium avium subsp. paratuberculosis in milk with the inherent possibility of differentiation between viable and dead cells. | Dzieciol M, Volgger P, Khol J, Baumgartner W, Wagner M, Hein I. | BMC Res Notes | 10.1186/1756-0500-3-251 | 2010 | |
| Phylogenomics and Comparative Genomic Studies Robustly Support Division of the Genus Mycobacterium into an Emended Genus Mycobacterium and Four Novel Genera. | Gupta RS, Lo B, Son J. | Front Microbiol | 10.3389/fmicb.2018.00067 | 2018 | |
| In Vitro Antimicrobial Activities of Tigecycline, Eravacycline, Omadacycline, and Sarecycline against Rapidly Growing Mycobacteria. | Zhang T, Du J, Dong L, Wang F, Zhao L, Jia J, Wang C, Cheng M, Yu X, Huang H. | Microbiol Spectr | 10.1128/spectrum.03238-22 | 2023 | |
| Biochip system for rapid and accurate identification of mycobacterial species from isolates and sputum. | Zhu L, Jiang G, Wang S, Wang C, Li Q, Yu H, Zhou Y, Zhao B, Huang H, Xing W, Mitchelson K, Cheng J, Zhao Y, Guo Y. | J Clin Microbiol | 10.1128/jcm.00158-10 | 2010 | |
| Non-tuberculous mycobacteria and other acid fast bacilli pathogens identification by qPCR and MALDI-ToF MS in tuberculosis-like lesions of slaughtered cattle from Ecuador. | Orlando SA, Vera Loor LE, Calderon J, Carvajal-Capa MJ, Arcos Alcivar F, Torres-Lasso P, Maza Valle WF, Vargas Gonzalez ON, Mora-Jaramillo N, Leon-Sosa A, Rivera A, Rodriguez-Pazmino AS, Castro-Rodriguez B, Franco Sotomayor G, Uruchima-Campoverde S, Gonzalez M, Benitez-Medina JM, Jimenez-Pizarro N, Hermoso de Mendoza J, Parra-Vera H, Garcia-Bereguiain MA. | Front Vet Sci | 10.3389/fvets.2025.1565066 | 2025 | |
| Nucleic acid amplification techniques for rapid diagnosis of nontuberculous mycobacteria: A protocol of systematic review and meta-analysis. | Yu G, Shen Y, Xu X, Lin L. | PLoS One | 10.1371/journal.pone.0250470 | 2021 | |
| In Vitro Susceptibility Testing of Bedaquiline against Mycobacterium abscessus Complex. | Brown-Elliott BA, Wallace RJ. | Antimicrob Agents Chemother | 10.1128/aac.01919-18 | 2019 | |
| Specificity of the immunohistochemical demonstration of mycobacterial antigens. | Geisel O, Netter F, Hermanns W. | Zentralbl Veterinarmed B | 10.1111/j.1439-0450.1994.tb00262.x | 1994 | |
| Antimicrobial susceptibility of standard strains of nontuberculous mycobacteria by microplate Alamar Blue assay. | Li G, Lian LL, Wan L, Zhang J, Zhao X, Jiang Y, Zhao LL, Liu H, Wan K. | PLoS One | 10.1371/journal.pone.0084065 | 2013 | |
| Polyclonal antibodies raised against Bacillus Calmette-Guerin, Mycobacterium duvalii, and Mycobacterium paratuberculosis used to detect mycobacteria in tissue with the use of immunohistochemical techniques. | Wiley EL, Mulhollan TJ, Beck B, Tyndall JA, Freeman RG. | Am J Clin Pathol | 10.1093/ajcp/94.3.307 | 1990 | |
| Cross-reactive and species specific Mycobacterium tuberculosis antigens in the immunoprofile of Schaumann bodies: a major clue to the etiology of sarcoidosis. | Ang SC, Moscovic EA. | Histol Histopathol | 1996 | ||
| Detection of Mycobacterium avium-intracellulare complex in bone marrow specimens of patients with acquired immunodeficiency syndrome. | Wiley EL, Perry A, Nightingale SD, Lawrence J. | Am J Clin Pathol | 10.1093/ajcp/101.4.446 | 1994 | |
| Mycolic acid patterns of some rapidly-growing species of Mycobacterium. | Minnikin DE, Minnikin SM, Parlett JH, Goodfellow M. | Zentralbl Bakteriol Mikrobiol Hyg A | 10.1016/s0176-6724(85)80076-6 | 1985 | |
| Mycobacterial biomaterials and resources for researchers. | Hazbon MH, Rigouts L, Schito M, Ezewudo M, Kudo T, Itoh T, Ohkuma M, Kiss K, Wu L, Ma J, Hamada M, Strong M, Salfinger M, Daley CL, Nick JA, Lee JS, Rastogi N, Couvin D, Hurtado-Ortiz R, Bizet C, Suresh A, Rodwell T, Albertini A, Lacourciere KA, Deheer-Graham A, Alexander S, Russell JE, Bradford R, Riojas MA. | Pathog Dis | 10.1093/femspd/fty042 | 2018 | |
| Numerical analysis of relationships among rapidly growing, scotochromogenic mycobacteria. | Tsukamura M, Mizuno S. | J Gen Microbiol | 10.1099/00221287-98-2-511 | 1977 | |
| Enoyl-coenzyme A hydratase and antigen 85B of Mycobacterium habana are specifically recognized by antibodies in sera from leprosy patients. | Serafin-Lopez J, Talavera-Paulin M, Amador-Molina JC, Alvarado-Riveron M, Vilchis-Landeros MM, Mendez-Ortega P, Fafutis-Morris M, Paredes-Cervantes V, Lopez-Santiago R, Leon CI, Guerrero MI, Ribas-Aparicio RM, Mendoza-Hernandez G, Carreno-Martinez C, Estrada-Parra S, Estrada-Garcia I. | Clin Vaccine Immunol | 10.1128/cvi.00519-10 | 2011 | |
| Evaluation of the new GenoType Mycobacterium assay for identification of mycobacterial species. | Russo C, Tortoli E, Menichella D. | J Clin Microbiol | 10.1128/jcm.44.2.334-339.2006 | 2006 | |
| Antibody responses in reindeer (Rangifer tarandus) infected with Mycobacterium bovis. | Waters WR, Palmer MV, Bannantine JP, Greenwald R, Esfandiari J, Andersen P, McNair J, Pollock JM, Lyashchenko KP. | Clin Diagn Lab Immunol | 10.1128/cdli.12.6.727-735.2005 | 2005 | |
| Catalases, peroxidases, and superoxide dismutases in Mycobacterium leprae and other mycobacteria studied by crossed immunoelectrophoresis and polyacrylamide gel electrophoresis. | Lygren ST, Closs O, Bercouvier H, Wayne LG. | Infect Immun | 10.1128/iai.54.3.666-672.1986 | 1986 | |
| A study of some fast-growing scotochromogenic mycobacteria including species descriptions of Mycobacterium gilvum (new species) and Mycobacterium duv alii (new species). | Stanford JL, Gunthorpe WJ. | Br J Exp Pathol | 1971 | ||
| Specificities and functions of the recA and pps1 intein genes of Mycobacterium tuberculosis and application for diagnosis of tuberculosis. | Saves I, Lewis LA, Westrelin F, Warren R, Daffe M, Masson JM. | J Clin Microbiol | 10.1128/jcm.40.3.943-950.2002 | 2002 | |
| Extracellular and cytosolic iron superoxide dismutase from Mycobacterium bovis BCG. | Kang SK, Jung YJ, Kim CH, Song CY. | Clin Diagn Lab Immunol | 10.1128/cdli.5.6.784-789.1998 | 1998 | |
| A study of Mycobacterium gordonae and Mycobacterium marianum (Scrofulaceum). | Gunthorpe WJ, Stanford JL. | Br J Exp Pathol | 1972 | ||
| Growth of group IV mycobacteria on medium containing various saturated and unsaturated fatty acids. | Saito H, Tomioka H, Yoneyama T. | Antimicrob Agents Chemother | 10.1128/aac.26.2.164 | 1984 | |
| In vitro activity of bedaquiline against rapidly growing nontuberculous mycobacteria. | Aguilar-Ayala DA, Cnockaert M, Andre E, Andries K, Gonzalez-Y-Merchand JA, Vandamme P, Palomino JC, Martin A. | J Med Microbiol | 10.1099/jmm.0.000537 | 2017 | |
| Genomics Insights into Mycolicibacterium Hassiacum Causing Infection in a Cat with Pyogranulomatous Dermatitis and Panniculitis. | Smedile D, Iurescia M, Carfora V, Cocumelli C, Palmerini T, Diaconu EL, Congiu I, Donati V, Stravino F, Sorbara L, Romano E, Caprioli A, Battisti A. | Pathogens | 10.3390/pathogens13090785 | 2024 |
| #11619 | Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 44244 |
| #20030 | Wink, J.: Compendium of Actinobacteria. HZI-Helmholtz-Centre for Infection Research, Braunschweig . |
| #20215 | Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 ) |
| #20218 | Verslyppe, B., De Smet, W., De Baets, B., De Vos, P., Dawyndt P.: StrainInfo introduces electronic passports for microorganisms.. Syst Appl Microbiol. 37: 42 - 50 2014 ( DOI 10.1016/j.syapm.2013.11.002 , PubMed 24321274 ) |
| #36324 | ; Curators of the CIP; |
| #55029 | Culture Collection University of Gothenburg (CCUG) ; Curators of the CCUG; CCUG 41352 |
| #66792 | Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) . |
| #67770 | Japan Collection of Microorganism (JCM) ; Curators of the JCM; |
| #68379 | Automatically annotated from API Coryne . |
| #68382 | Automatically annotated from API zym . |
| #118984 | Collection of Institut Pasteur ; Curators of the CIP; CIP 104539 |
| #125438 | Julia Koblitz, Lorenz Christian Reimer, Rüdiger Pukall, Jörg Overmann: Predicting bacterial phenotypic traits through improved machine learning using high-quality, curated datasets. 2024 ( DOI 10.1101/2024.08.12.607695 ) |
| #125439 | Philipp Münch, René Mreches, Martin Binder, Hüseyin Anil Gündüz, Xiao-Yin To, Alice McHardy: deepG: Deep Learning for Genome Sequence Data. R package version 0.3.1 . |
| #126262 | A. Lissin, I. Schober, J. F. Witte, H. Lüken, A. Podstawka, J. Koblitz, B. Bunk, P. Dawyndt, P. Vandamme, P. de Vos, J. Overmann, L. C. Reimer: StrainInfo—the central database for linked microbial strain identifiers. ( DOI 10.1093/database/baaf059 ) |
You found an error in BacDive? Please tell us about it!
Note that changes will be reviewed and judged. If your changes are legitimate, changes will occur within the next BacDive update. Only proposed changes supported by the according reference will be reviewed. The BacDive team reserves the right to reject proposed changes.
Successfully sent
If you want to cite this particular strain cite the following doi:
https://doi.org/10.13145/bacdive8412.20251217.10
When using BacDive for research please cite the following paper
BacDive in 2025: the core database for prokaryotic strain data