Name: Mycobacterium peregrinum Bojalil 40
Creator: BacDive
License: http://creativecommons.org/licenses/by-nc/4.0/

Strain identifier

BacDive ID: 8276

Type strain:

Species: Mycobacterium peregrinum

Strain Designation: Bojalil 40

Culture col. no.: DSM 43271, ATCC 14467, ATCC 23023, IMET 10608, NCTC 10264, TMC 1547, JCM 12142, ATCC 23036, CCUG 27976, CCUG 41354, CECT 3023, CIP 105382, KCTC 9615, LMG 19256, PCM 639

Strain history: LMG 19256 <-- D. Springael <-- DSM 43271 <-- K. Kieslich; Schering 206 <-- ATCC 14467 <-- L. F. Bojalil; 40 <-- Hosp. Infantil, Mexico; 6020.

NCBI tax ID(s): 43304 (species)

Other strains from Mycobacterium peregrinum

M. peregrinum DSM 43533, SN 2300
M. peregrinum DSM 46638, IMET 10654, SN 259 Typ ...
M. peregrinum CCUG 28064

Section

Mycobacterium peregrinum Bojalil 40 is a mesophilic human pathogen that was isolated from bronchial aspiration.

human pathogen
mesophilic
16S sequence
Bacteria
genome sequence

Information on the name and the taxonomic classification. Name and taxonomic classification

	Last LPSN update	07-12-2022 (DD-MM-YYYY)
	Domain	"Bacteria"
	Phylum	*Actinomycetota*
	Class	*Actinomycetes*
	Order	*Mycobacteriales*
	Family	*Mycobacteriaceae*
	Genus	*Mycobacterium*
	Species	**Mycobacterium peregrinum**
	Full Scientific Name (PNU)	Mycobacterium peregrinum (ex Bojalil et al. 1962) Kusunoki and Ezaki 1992

Synonym

Mycolicibacterium peregrinum

Information on culture and growth conditions Culture and growth conditions

[Ref.: #36366]

Culture medium

MEDIUM 55 - for Mycobacterium

[Ref.: #36366]

Culture medium growth

[Ref.: #10803]

Culture medium

MIDDLEBROOK MEDIUM (DSMZ Medium 645)

[Ref.: #10803]

Culture medium growth

[Ref.: #10803]

Culture medium link

Medium recipe provided by DSMZ

		Temperature
[Ref.: #10803]	growth	37 °C
[Ref.: #36366]	growth	37 °C
[Ref.: #67770]	growth	37 °C

[Ref.: #10803]	Temperature range	mesophilic
[Ref.: #36366]	Temperature range	mesophilic
[Ref.: #67770]	Temperature range	mesophilic

Information on isolation source, the sampling and environmental conditions Isolation, sampling and environmental information

[Ref.: #10803]	Sample type/isolated from	bronchial aspiration

[Ref.: #67770]	Sample type/isolated from	Bronchial aspiration of a child
[Ref.: #67770]	Country	Mexico
[Ref.: #67770]	Country ISO 3 Code	MEX
[Ref.: #67770]	Continent	North America
* marker position based on {}

Isolation sources categories

#Host Body Product	#Fluids	#Aspirate
#Host Body-Site	#Oral cavity and airways	-

What are isolation sources categories?

Information on possible application of the strain and its possible interaction with e.g. potential hosts Safety information

[Ref.: #10803]	Pathogenicity (human)	yes
[Ref.: #10803]	Pathogenicity (animal)	yes
[Ref.: #10803]	Biosafety level	2	Risk group (German classification) According to TRBA 466

Information on genomic background e.g. entries in nucleic sequence databass Sequence information

16S Sequence information:

	Sequence accession description	Seq. accession number	Sequence length (bp)	Sequence database	Associated NCBI tax ID
[Ref.: #20218]	Mycobacterium peregrinum 16S ribosomal RNA gene, partial sequence	AF058712	1469	ENA	43304 tax ID	*
[Ref.: #20218]	Mycobacterium peregrinum 16S ribosomal RNA gene, partial sequence	AF130308	1440	ENA	43304 tax ID	*
[Ref.: #20218]	Mycobacterium peregrinum partial 16S rRNA gene, strain ATCC14467	AJ422046	1077	ENA	43304 tax ID	*
[Ref.: #20218]	Mycobacterium peregrinum partial 16S rRNA gene, strain NCTC 10264	AM884319	551	ENA	43304 tax ID	*
[Ref.: #67770]	Mycolicibacterium peregrinum strain CIP 105382 16S ribosomal RNA gene, partial sequence	AY457069	1483	ENA	43304 tax ID

Genome sequence information:

	Sequence accession description	Seq. accession number	Assembly level (bp)	Sequence database	Associated NCBI tax ID
[Ref.: #66792]	Mycobacterium peregrinum strain DSM 43271	43304.9	wgs	PATRIC	43304 tax ID	*
[Ref.: #67770]	Mycolicibacterium peregrinum DSM 43271	GCA_002102345	contig	GenBank	43304 tax ID
[Ref.: #66792]	Mycolicibacterium peregrinum DSM 43271	GCA_025822425	scaffold	GenBank	43304 tax ID	*
[Ref.: #66792]	Vibrio cholerae 2012HC-31	GCA_000788835	scaffold	PATRIC	666 tax ID	*

[Ref.: #67770]

GC-content

66.3 mol%

genome sequence analysis

Availability in culture collections External links

[Ref.: #10803]

Culture collection no.

DSM 43271, ATCC 14467, ATCC 23023, IMET 10608, NCTC 10264, TMC 1547, JCM 12142, ATCC 23036, CCUG 27976, CCUG 41354, CECT 3023, CIP 105382, KCTC 9615, LMG 19256, PCM 639

[Ref.: #20218]

Associated Passport(s) in StrainInfo

49646, 49642, 49643, 153051, 153052

Literature:

Topic	Title	Authors	Journal	DOI	Year
Phylogeny	Proposal of Mycobacterium peregrinum sp. nov., nom. rev., and elevation of Mycobacterium chelonae subsp. abscessus (Kubica et al.) to species status: Mycobacterium abscessus comb. nov.	Kusunoki S, Ezaki T	Int J Syst Bacteriol	10.1099/00207713-42-2-240	1992	*
Enzymology	Multicenter evaluation of mycobacteria identification by PCR restriction enzyme analysis in laboratories from Latin America and the Caribbean.	Leao SC, Bernardelli A, Cataldi A, Zumarraga M, Robledo J, Realpe T, Mejia GI, da Silva Telles MA, Chimara E, Velazco M, Fernandez J, Rodrigues PA, Guerrero MI, Leon CI, Porras TB, Rastogi N, Goh KS, Suffys P, da Silva Rocha A, dos Santos Netto D, Ritacco V, Lopez B, Barrera L, Palomino JC, Martin A, Portaels F	J Microbiol Methods	10.1016/j.mimet.2004.11.015	2004	*

References

#10803

Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 43271

#20215

Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )

#20218

Verslyppe, B., De Smet, W., De Baets, B., De Vos, P., Dawyndt P.: StrainInfo introduces electronic passports for microorganisms.. Syst Appl Microbiol. 37: 42 - 50 2014 ( DOI 10.1016/j.syapm.2013.11.002 , PubMed 24321274 )

#36366 ; Curators of the CIP;

#66792

Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

#67770 Japan Collection of Microorganism (JCM) ; Curators of the JCM;

#69480

Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Predictions based on genome sequence made in the Diaspora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

* These data were automatically processed and therefore are not curated

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