Mycobacterium fortuitum subsp. fortuitum Cruz 1 is an obligate aerobe, mesophilic human pathogen that was isolated from cold abscess, human.
obligate aerobe mesophilic human pathogen genome sequence 16S sequence| @ref 20215 |
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| Domain Bacillati |
| Phylum Actinomycetota |
| Class Actinomycetes |
| Order Mycobacteriales |
| Family Mycobacteriaceae |
| Genus Mycobacterium |
| Species Mycobacterium fortuitum subsp. fortuitum |
| Full scientific name Mycobacterium fortuitum subsp. fortuitum (da Costa Cruz 1938) Tsukamura et al. 1986 |
| Synonyms (1) |
| @ref: | 12593 |
| multimedia content: | DSM_46621-1.jpg |
| multimedia.multimedia content: | https://www.dsmz.de/microorganisms/photos/DSM_46621-1.jpg |
| intellectual property rights: | © Leibniz-Institut DSMZ |
| manual_annotation: | 1 |
| @ref: | 12593 |
| multimedia content: | DSM_46621-2.jpg |
| multimedia.multimedia content: | https://www.dsmz.de/microorganisms/photos/DSM_46621-2.jpg |
| intellectual property rights: | © Leibniz-Institut DSMZ |
| manual_annotation: | 1 |
| @ref: | 12593 |
| multimedia content: | DSM_46621.jpg |
| multimedia.multimedia content: | https://www.dsmz.de/microorganisms/photos/DSM_46621.jpg |
| caption: | Medium 645 37°C |
| intellectual property rights: | © Leibniz-Institut DSMZ |
| manual_annotation: | 1 |
| @ref | Name | Growth | Medium link | Composition | |
|---|---|---|---|---|---|
| 12593 | MIDDLEBROOK MEDIUM (DSMZ Medium 645) | Medium recipe at MediaDive | Name: MIDDLEBROOK MEDIUM (DSMZ Medium 645) Composition: Bacto Middlebrook 7H10 agar 20.9945 g/l Glycerol Distilled water | ||
| 32743 | MEDIUM 93 - for Mycobacterium avium subsp. sylvaticum | Distilled water make up to (900.000 ml);Glycerol (4.500 ml);Middlebrook7H10 agar (17.000 g);Middelbrook OADC enrichment (100.000 ml) | |||
| 119439 | CIP Medium 55 | Medium recipe at CIP | |||
| 119439 | CIP Medium 93 | Medium recipe at CIP |
| 12593 | Compoundrestriction endonuclease MfoAI |
| 67770 | Observationquinones: MK-9(H2) |
| @ref | Metabolite | Is antibiotic | Is sensitive | Is resistant | |
|---|---|---|---|---|---|
| 119439 | 0129 (2,4-Diamino-6,7-di-iso-propylpteridine phosphate) |
| @ref | Value | Activity | Ec | |
|---|---|---|---|---|
| 68382 | acid phosphatase | + | 3.1.3.2 | from API zym |
| 119439 | alcohol dehydrogenase | - | 1.1.1.1 | |
| 68382 | alkaline phosphatase | + | 3.1.3.1 | from API zym |
| 68382 | alpha-chymotrypsin | - | 3.4.21.1 | from API zym |
| 68382 | alpha-fucosidase | - | 3.2.1.51 | from API zym |
| 68382 | alpha-galactosidase | - | 3.2.1.22 | from API zym |
| 68382 | alpha-glucosidase | - | 3.2.1.20 | from API zym |
| 68382 | alpha-mannosidase | + | 3.2.1.24 | from API zym |
| 119439 | amylase | - | ||
| 68382 | beta-galactosidase | - | 3.2.1.23 | from API zym |
| 119439 | beta-galactosidase | - | 3.2.1.23 | |
| 68382 | beta-glucosidase | + | 3.2.1.21 | from API zym |
| 68382 | beta-glucuronidase | - | 3.2.1.31 | from API zym |
| 119439 | caseinase | - | 3.4.21.50 | |
| 119439 | catalase | + | 1.11.1.6 | |
| 68382 | cystine arylamidase | - | 3.4.11.3 | from API zym |
| 119439 | DNase | - | ||
| 68382 | esterase (C 4) | + | from API zym | |
| 68382 | esterase lipase (C 8) | + | from API zym | |
| 119439 | gamma-glutamyltransferase | - | 2.3.2.2 | |
| 119439 | gelatinase | - | ||
| 119439 | lecithinase | - | ||
| 68382 | leucine arylamidase | + | 3.4.11.1 | from API zym |
| 119439 | lipase | - | ||
| 68382 | lipase (C 14) | - | from API zym | |
| 119439 | lysine decarboxylase | - | 4.1.1.18 | |
| 68382 | N-acetyl-beta-glucosaminidase | - | 3.2.1.52 | from API zym |
| 68382 | naphthol-AS-BI-phosphohydrolase | + | from API zym | |
| 119439 | ornithine decarboxylase | - | 4.1.1.17 | |
| 119439 | oxidase | - | ||
| 119439 | protease | - | ||
| 68382 | trypsin | - | 3.4.21.4 | from API zym |
| 119439 | tryptophan deaminase | - | ||
| 119439 | tween esterase | - | ||
| 119439 | urease | + | 3.5.1.5 | |
| 68382 | valine arylamidase | + | from API zym |
| @ref | Description | Assembly level | INSDC accession | BV-BRC accession | IMG accession | NCBI tax ID | Score | |
|---|---|---|---|---|---|---|---|---|
| 66792 | ASM2217954v1 assembly for Mycolicibacterium fortuitum subsp. fortuitum JCM 6387 | complete | 144549 | 97.83 | ||||
| 67770 | ASM29585v1 assembly for Mycolicibacterium fortuitum subsp. fortuitum DSM 46621 = ATCC 6841 = JCM 6387 | scaffold | 1214102 | 13.24 | ||||
| 66792 | ASM147549v2 assembly for Mycolicibacterium fortuitum subsp. fortuitum DSM 46621 = ATCC 6841 = JCM 6387 | chromosome | 1214102 | |||||
| 67770 | Mycobacterium fortuitum ATCC 6841 assembly for Mycolicibacterium fortuitum subsp. fortuitum DSM 46621 = ATCC 6841 = JCM 6387 | scaffold | 1214102 |
| @ref | Description | Accession | Length | Database | NCBI tax ID | |
|---|---|---|---|---|---|---|
| 20218 | Mycolicibacterium fortuitum subsp. fortuitum DSM 46621 = ATCC 6841 = JCM 6387 16S ribosomal RNA (rrs), partial sequence | AF059851 | 171 | 1214102 | ||
| 20218 | Mycobacterium fortuitum subsp. fortuitum strain CIP 104534 16S ribosomal RNA gene, partial sequence | AF547924 | 540 | 1214102 | ||
| 20218 | Mycobacterium fortuitum tyrS gene, 3-mag gene (partial) and 16S rRNA gene (partial), strain ATCC 6841 | AJ296160 | 2397 | 1214102 | ||
| 20218 | Mycobacterium fortuitum subsp. fortuitum 16S rRNA gene | AJ536039 | 1457 | 1214102 | ||
| 20218 | M.fortuitum 16S ribosomal RNA gene | M59282 | 146 | 1766 | ||
| 20218 | Mycobacterium fortuitum ATCC 6841, 16S ribosomal RNA gene, partial sequence | U92089 | 880 | 1214102 | ||
| 20218 | Mycobacterium fortuitum 16S rRNA gene | X52933 | 1450 | 1214102 | ||
| 12593 | Mycolicibacterium fortuitum subsp. fortuitum DSM 46621 = ATCC 6841 = JCM 6387 strain CIP 104534 16S ribosomal RNA gene, partial sequence | AY457066 | 1483 | 1214102 |
| @ref | GC-content (mol%) | Method | |
|---|---|---|---|
| 67770 | 66.4 | genome sequence analysis |
| Title | Authors | Journal | DOI | Year | |
|---|---|---|---|---|---|
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| #12593 | Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 46621 |
| #20215 | Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 ) |
| #20218 | Verslyppe, B., De Smet, W., De Baets, B., De Vos, P., Dawyndt P.: StrainInfo introduces electronic passports for microorganisms.. Syst Appl Microbiol. 37: 42 - 50 2014 ( DOI 10.1016/j.syapm.2013.11.002 , PubMed 24321274 ) |
| #32743 | ; Curators of the CIP; |
| #66792 | Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) . |
| #67770 | Japan Collection of Microorganism (JCM) ; Curators of the JCM; |
| #68382 | Automatically annotated from API zym . |
| #119439 | Collection of Institut Pasteur ; Curators of the CIP; CIP 104534 |
| #125439 | Philipp Münch, René Mreches, Martin Binder, Hüseyin Anil Gündüz, Xiao-Yin To, Alice McHardy: deepG: Deep Learning for Genome Sequence Data. R package version 0.3.1 . |
| #126262 | A. Lissin, I. Schober, J. F. Witte, H. Lüken, A. Podstawka, J. Koblitz, B. Bunk, P. Dawyndt, P. Vandamme, P. de Vos, J. Overmann, L. C. Reimer: StrainInfo—the central database for linked microbial strain identifiers. ( DOI 10.1093/database/baaf059 ) |
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