Acinetobacter tandoii 4N13 is an obligate aerobe, Gram-negative, oval-shaped bacterium that was isolated from Wastewater treatment plant.
Gram-negative oval-shaped obligate aerobe genome sequence 16S sequence Bacteria| @ref 20215 |
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| Domain Bacteria |
| Phylum Pseudomonadota |
| Class Gammaproteobacteria |
| Order Pseudomonadales |
| Family Moraxellaceae |
| Genus Acinetobacter |
| Species Acinetobacter tandoii |
| Full scientific name Acinetobacter tandoii Carr et al. 2003 |
| BacDive ID | Other strains from Acinetobacter tandoii (1) | Type strain |
|---|---|---|
| 152762 | A. tandoii CCUG 47563 B |
| @ref | Name | Growth | Medium link | Composition | |
|---|---|---|---|---|---|
| 5645 | CASO AGAR (MERCK 105458) (DSMZ Medium 220) | Medium recipe at MediaDive | Name: CASO AGAR (Merck 105458) (DSMZ Medium 220) Composition: Agar 15.0 g/l Casein peptone 15.0 g/l NaCl 5.0 g/l Soy peptone 5.0 g/l Distilled water | ||
| 5645 | TRYPTICASE SOY BROTH AGAR (DSMZ Medium 535) | Medium recipe at MediaDive | Name: TRYPTICASE SOY BROTH AGAR (DSMZ Medium 535) Composition: Trypticase soy broth 30.0 g/l Agar 15.0 g/l Distilled water | ||
| 42122 | MEDIUM 72- for trypto casein soja agar | Distilled water make up to (1000.000 ml);Trypto casein soy agar (40.000 g) | |||
| 123427 | CIP Medium 72 | Medium recipe at CIP |
| @ref | Chebi-ID | Metabolite | Utilization activity | Kind of utilization tested | |
|---|---|---|---|---|---|
| 68369 | 17128 ChEBI | adipate | - | assimilation | from API 20NE |
| 68369 | 29016 ChEBI | arginine | - | hydrolysis | from API 20NE |
| 68369 | 17634 ChEBI | D-glucose | - | assimilation | from API 20NE |
| 68369 | 17634 ChEBI | D-glucose | - | fermentation | from API 20NE |
| 68369 | 16899 ChEBI | D-mannitol | - | assimilation | from API 20NE |
| 68369 | 16024 ChEBI | D-mannose | - | assimilation | from API 20NE |
| 68369 | 27689 ChEBI | decanoate | + | assimilation | from API 20NE |
| 68369 | 4853 ChEBI | esculin | - | hydrolysis | from API 20NE |
| 68369 | 5291 ChEBI | gelatin | - | hydrolysis | from API 20NE |
| 68369 | 24265 ChEBI | gluconate | - | assimilation | from API 20NE |
| 68369 | 30849 ChEBI | L-arabinose | - | assimilation | from API 20NE |
| 68369 | 25115 ChEBI | malate | + | assimilation | from API 20NE |
| 68369 | 17306 ChEBI | maltose | - | assimilation | from API 20NE |
| 68369 | 59640 ChEBI | N-acetylglucosamine | - | assimilation | from API 20NE |
| 123427 | 17632 ChEBI | nitrate | - | reduction | |
| 123427 | 17632 ChEBI | nitrate | - | respiration | |
| 68369 | 17632 ChEBI | nitrate | - | reduction | from API 20NE |
| 123427 | 16301 ChEBI | nitrite | - | reduction | |
| 68369 | 27897 ChEBI | tryptophan | - | energy source | from API 20NE |
| 68369 | 16199 ChEBI | urea | - | hydrolysis | from API 20NE |
| @ref | Metabolite | Is sensitive | Is resistant | |
|---|---|---|---|---|
| 123427 | 0129 (2,4-Diamino-6,7-di-iso-propylpteridine phosphate) |
| @ref | Value | Activity | Ec | |
|---|---|---|---|---|
| 68382 | acid phosphatase | - | 3.1.3.2 | from API zym |
| 68382 | alkaline phosphatase | - | 3.1.3.1 | from API zym |
| 68382 | alpha-chymotrypsin | - | 3.4.21.1 | from API zym |
| 68382 | alpha-fucosidase | - | 3.2.1.51 | from API zym |
| 68382 | alpha-galactosidase | - | 3.2.1.22 | from API zym |
| 68382 | alpha-glucosidase | - | 3.2.1.20 | from API zym |
| 68382 | alpha-mannosidase | - | 3.2.1.24 | from API zym |
| 68369 | arginine dihydrolase | - | 3.5.3.6 | from API 20NE |
| 68382 | beta-galactosidase | - | 3.2.1.23 | from API zym |
| 123427 | beta-galactosidase | + | 3.2.1.23 | |
| 68382 | beta-glucosidase | - | 3.2.1.21 | from API zym |
| 68369 | beta-glucosidase | - | 3.2.1.21 | from API 20NE |
| 68382 | beta-glucuronidase | - | 3.2.1.31 | from API zym |
| 5645 | catalase | + | 1.11.1.6 | |
| 123427 | catalase | + | 1.11.1.6 | |
| 68382 | cystine arylamidase | - | 3.4.11.3 | from API zym |
| 68369 | cytochrome oxidase | - | 1.9.3.1 | from API 20NE |
| 5645 | cytochrome-c oxidase | - | 1.9.3.1 | |
| 68382 | esterase (C 4) | + | from API zym | |
| 68382 | esterase lipase (C 8) | + | from API zym | |
| 123427 | gamma-glutamyltransferase | - | 2.3.2.2 | |
| 123427 | gelatinase | - | ||
| 68369 | gelatinase | - | from API 20NE | |
| 68382 | leucine arylamidase | + | 3.4.11.1 | from API zym |
| 68382 | lipase (C 14) | - | from API zym | |
| 68382 | N-acetyl-beta-glucosaminidase | - | 3.2.1.52 | from API zym |
| 68382 | naphthol-AS-BI-phosphohydrolase | - | from API zym | |
| 123427 | oxidase | - | ||
| 68382 | trypsin | - | 3.4.21.4 | from API zym |
| 123427 | urease | - | 3.5.1.5 | |
| 68369 | urease | - | 3.5.1.5 | from API 20NE |
| 68382 | valine arylamidase | - | from API zym |
| @ref | Description | Assembly level | INSDC accession | BV-BRC accession | IMG accession | NCBI tax ID | Score | |
|---|---|---|---|---|---|---|---|---|
| 66792 | Acin_tand_CIP_107469_V1 assembly for Acinetobacter tandoii DSM 14970 = CIP 107469 | scaffold | 1120927 | 69.23 | ||||
| 66792 | ASM62106v1 assembly for Acinetobacter tandoii DSM 14970 = CIP 107469 | scaffold | 1120927 | 61.4 |
| @ref | Description | Accession | Length | Database | NCBI tax ID | |
|---|---|---|---|---|---|---|
| 20218 | Acinetobacter tandoii strain DSM14970 16S ribosomal RNA gene, partial sequence | EF611414 | 452 | 202954 | ||
| 20218 | Acinetobacter tandoii strain DSM 14970 16S ribosomal RNA gene, partial sequence | GU388381 | 1375 | 202954 | ||
| 20218 | Acinetobacter tandoii genomic DNA containing 16S-23S IGS, strain DSM 14970, direct sequence All | HE651866 | 657 | 202954 | ||
| 20218 | Acinetobacter tandoii 16S rRNA gene, strain DSM 14970 | HE651929 | 1529 | 202954 | ||
| 5645 | Acinetobacter tandoii 16S ribosomal RNA gene, partial sequence | AF509830 | 1325 | 202954 | ||
| 124043 | Acinetobacter tandoii strain DSM 14970 16S ribosomal RNA gene, partial sequence. | OQ331051 | 282 | 202954 | ||
| 124043 | Acinetobacter tandoii strain DSM 14970 16S ribosomal RNA gene, partial sequence. | MN294612 | 953 | 202954 | ||
| 124043 | Acinetobacter tandoii strain DSM 14970 16S ribosomal RNA gene, partial sequence. | MH660445 | 404 | 202954 | ||
| 124043 | Acinetobacter tandoii strain CCM 7199 16S ribosomal RNA gene, partial sequence. | HQ180189 | 1392 | 202954 |
| @ref | Trait | Model | Prediction | Confidence in % | In training data |
|---|---|---|---|---|---|
| 125439 | oxygen_tolerance | BacteriaNetⓘ | obligate aerobe | 97.15 | no |
| 125439 | gram_stain | BacteriaNetⓘ | negative | 79.72 | no |
| 125439 | motility | BacteriaNetⓘ | yes | 46.24 | no |
| 125439 | spore_formation | BacteriaNetⓘ | no | 97.89 | no |
| @ref | Trait | Model | Prediction | Confidence in % | In training data |
|---|---|---|---|---|---|
| 125438 | gram-positive | gram-positiveⓘ | no | 98.00 | no |
| 125438 | anaerobic | anaerobicⓘ | no | 98.39 | no |
| 125438 | aerobic | aerobicⓘ | yes | 89.67 | no |
| 125438 | spore-forming | spore-formingⓘ | no | 93.33 | no |
| 125438 | thermophilic | thermophileⓘ | no | 98.98 | yes |
| 125438 | flagellated | motile2+ⓘ | no | 77.70 | no |
| Topic | Title | Authors | Journal | DOI | Year | |
|---|---|---|---|---|---|---|
| Pathogenicity | A new and promiscuous alpha/beta hydrolase from Acinetobacter tandoii DSM 14970 T inactivates the mycotoxin ochratoxin A. | Sanchez-Arroyo A, Plaza-Vinuesa L, Abeijon-Mukdsi MC, de Las Rivas B, Mancheno JM, Munoz R. | Appl Microbiol Biotechnol | 10.1007/s00253-024-13073-x | 2024 | |
| Phylogeny | Microbial diversity structure in acetate single chamber microbial fuel cell for electricity generation. | Khater DZ, El-Khatib KM, Hassan HM. | J Genet Eng Biotechnol | 10.1016/j.jgeb.2017.01.008 | 2017 | |
| Metabolism | From Rare to Dominant: a Fine-Tuned Soil Bacterial Bloom during Petroleum Hydrocarbon Bioremediation. | Fuentes S, Barra B, Caporaso JG, Seeger M. | Appl Environ Microbiol | 10.1128/aem.02625-15 | 2016 | |
| Phylogeny | Seven novel species of Acinetobacter isolated from activated sludge. | Carr EL, Kampfer P, Patel BKC, Gurtler V, Seviour RJ | Int J Syst Evol Microbiol | 10.1099/ijs.0.02486-0 | 2003 | |
| Acinetobacter tibetensis sp. nov., Isolated from a Soil Under a Greenhouse in Tibet. | Pan H, Li J, Liu HH, Lu XY, Zhang YF, Tian Y. | Curr Microbiol | 10.1007/s00284-022-03158-z | 2022 |
| #5645 | Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 14970 |
| #20215 | Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 ) |
| #20218 | Verslyppe, B., De Smet, W., De Baets, B., De Vos, P., Dawyndt P.: StrainInfo introduces electronic passports for microorganisms.. Syst Appl Microbiol. 37: 42 - 50 2014 ( DOI 10.1016/j.syapm.2013.11.002 , PubMed 24321274 ) |
| #42122 | ; Curators of the CIP; |
| #66792 | Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) . |
| #68369 | Automatically annotated from API 20NE . |
| #68382 | Automatically annotated from API zym . |
| #123427 | Collection of Institut Pasteur ; Curators of the CIP; CIP 107469 |
| #124043 | Isabel Schober, Julia Koblitz: Data extracted from sequence databases, automatically matched based on designation and taxonomy . |
| #125438 | Julia Koblitz, Lorenz Christian Reimer, Rüdiger Pukall, Jörg Overmann: Predicting bacterial phenotypic traits through improved machine learning using high-quality, curated datasets. 2024 ( DOI 10.1101/2024.08.12.607695 ) |
| #125439 | Philipp Münch, René Mreches, Martin Binder, Hüseyin Anil Gündüz, Xiao-Yin To, Alice McHardy: deepG: Deep Learning for Genome Sequence Data. R package version 0.3.1 . |
| #126262 | A. Lissin, I. Schober, J. F. Witte, H. Lüken, A. Podstawka, J. Koblitz, B. Bunk, P. Dawyndt, P. Vandamme, P. de Vos, J. Overmann, L. C. Reimer: StrainInfo—the central database for linked microbial strain identifiers. ( DOI 10.1093/database/baaf059 ) |
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