Name: Acinetobacter calcoaceticus DSM 30006
Creator: BacDive
License: https://creativecommons.org/licenses/by/4.0/

Strain identifier

BacDive ID: 8057

Type strain:

Species: Acinetobacter calcoaceticus

Culture col. no.: DSM 30006, ATCC 23055, CIP 81.08, CIP 81.8, LMD 22.16, CCUG 12804, LMG 1046, IFO 13718, Delft L360, JCM 6842, CECT 441, IAM 12087, KCTC 2357, LMG 10511, NBIMCC 3730, NBRC 13718, NCCB 22016, NCIMB 10694, NCTC 12983, VTT E-981117, LMD 98116

Strain history: CIP <- 1981, ATCC <- M. Doudoroff: strain 46, Moraxella calcoacetica <- Lab. voor Microbiol., The Netherlands: strain Delf 1, Micrococcus calcoaceticus designated as strain 317 until 1922 <- M.W. Beijerinck

NCBI tax ID(s): 981331 (strain), 471 (species)

SI-ID 3966

LMG 1046, ATCC 23055, CCUG 12804, CECT 441, IAM 12087, IFO 13718, LMG 10511, NCIB 10694, NCIB 9029, ATCC 19638, ATCC 23322, LMD 1, NCTC 12983, JCM 6842, NCIMB 10694, NCIMB9029, LMD 95.116, CIP 81.08, LMD 95.118, LMD 22.16, LMD 95.141, LMD 89.14, LMD95.114, CCRC 10351, KCTC 2357, NBRC 13718, NCCB 22016, NCCB 89014, LMD 89.51, LMD 89.66, LMD 89.69, BCRC 10351, NBIMCC 3730, VTT E-981117, LMD 98116, DSM 30006, CIP 81.8

Special Collections

Other strains from Acinetobacter calcoaceticus

Section

Acinetobacter calcoaceticus DSM 30006 is an obligate aerobe, Gram-negative bacterium that was isolated from quinate enrichment from soil.

Gram-negative
obligate aerobe
16S sequence
Bacteria
genome sequence

Information on the name and the taxonomic classification. Name and taxonomic classification

	Last LPSN update	14-12-2023 (DD-MM-YYYY)
	Domain	"Bacteria"
	Phylum	*Pseudomonadota*
	Class	*Gammaproteobacteria*
	Order	*Pseudomonadales*
	Family	*Moraxellaceae*
	Genus	*Acinetobacter*
	Species	**Acinetobacter calcoaceticus**
	Full Scientific Name (LPSN)	Acinetobacter calcoaceticus (Beijerinck 1911) Baumann et al. 1968 (Approved Lists 1980)

Synonym

"Micrococcus calcoaceticus"

Information on morphological and physiological properties Morphology

[Ref.: #117098]	Gram stain	negative
[Ref.: #69480]	Gram stain	negative Confidence in %98.5

[Ref.: #117098]	Cell shape	oval-shaped

[Ref.: #117098]	Motility	no

[Ref.: #9083]	Type of hemolysis	gamma
[Ref.: #9083]	Incubation period	1-2 days

Information on culture and growth conditions Culture and growth conditions

[Ref.: #42150]

Culture medium

MEDIUM 3 - Columbia agar

[Ref.: #42150]

Culture medium growth

[Ref.: #42150]

Culture medium composition

expand / minimize

[Ref.: #9083]

Culture medium

COLUMBIA BLOOD MEDIUM (DSMZ Medium 693)

[Ref.: #9083]

Culture medium growth

[Ref.: #9083]

Culture medium link

Medium recipe at MediaDive

[Ref.: #9083]

Culture medium composition

expand / minimize

[Ref.: #9083]

Culture medium

NUTRIENT AGAR (DSMZ Medium 1)

[Ref.: #9083]

Culture medium growth

[Ref.: #9083]

Culture medium link

Medium recipe at MediaDive

[Ref.: #9083]

Culture medium composition

expand / minimize

[Ref.: #117098]

Culture medium

CIP Medium 72

[Ref.: #117098]

Culture medium growth

[Ref.: #117098]

Culture medium link

Medium recipe provided by DSMZ

[Ref.: #117098]

Culture medium

CIP Medium 3

[Ref.: #117098]

Culture medium growth

[Ref.: #117098]

Culture medium link

Medium recipe provided by DSMZ

	Kind of temperature		Temperature
[Ref.: #9083]		growth	30 °C
[Ref.: #42150]		growth	30 °C
[Ref.: #67770]		growth	30 °C
[Ref.: #117098]		growth	10-37 °C
[Ref.: #117098]	no	growth	41 °C
[Ref.: #117098]	no	growth	45 °C

Information on physiology and metabolism Physiology and metabolism

[Ref.: #117098]

Oxygen tolerance

obligate aerobe

Note that the displayed test results represent raw data and therefore may deviate!

Antibiotic susceptibility testing

Test 1

Test 2

Test 3

Reference

[Ref.: #9083]
Mueller-Hinton Agar



yes
Inhibition zone diameter in mm
30
42
40
>50
>50
30
34-36
>50
>50
>50
>50
38
40
42
30
>50
resistant0
>50
>50
22
34
30
40
22
>50
30
>50
>50
30
22-24
>50
24
resistant0
38
20
>50

[Ref.: #9083]
Mueller-Hinton Agar
30

aerob
yes
Inhibition zone diameter in mm
22
34
32
46-48
40
22
28-30
42
40
46-48
42
28-30
32
34
20
42
18
42
40
18
26
22-24
32
20
36
28-30
44
42
30
12
44
30
resistant0
32
14-16
46

[Ref.: #9083]
Mueller-Hinton Agar
30
1
aerob
yes
Inhibition zone diameter in mm
28
38
34
>50
46
28-30
32-34
50
44
>50
46-48
30
30
34
24-26
40
18-20
42
40
18
28
26
32
20
32
26
42
46-48
30
14
42
30
resistant0
32
16
48

Only first 15 entries are displayed. Click here to see all.

[Ref.: #69480]

Ability of spore formation

no Confidence in %94.372

[Ref.: #9083]	Name of produced compound	isoprene
[Ref.: #20216]	Name of produced compound	Isoprene

	Salt	Tested relation		Salt conc.
[Ref.: #117098]	NaCl		growth	0-2	%
[Ref.: #117098]	NaCl	no	growth	4	%
[Ref.: #117098]	NaCl	no	growth	6	%
[Ref.: #117098]	NaCl	no	growth	8	%
[Ref.: #117098]	NaCl	no	growth	10	%

	Metabolite	Utilization activity	Kind of utilization tested
[Ref.: #68369]	adipate ChEBI	+	assimilation	* from API 20NE
[Ref.: #68368]	amygdalin ChEBI	-	fermentation	* from API 20E
[Ref.: #68369]	arginine ChEBI	-	hydrolysis	* from API 20NE, API 20E, API ID32E
[Ref.: #68374]	cellobiose ChEBI	-	builds acid from	* from API ID32E
[Ref.: #68368]	citrate ChEBI	-	assimilation	* from API 20E
[Ref.: #68374]	D-arabitol ChEBI	-	builds acid from	* from API ID32E
[Ref.: #68374]	D-galacturonic acid ChEBI	-	builds acid from	* from API ID32E
[Ref.: #68368]	D-glucose ChEBI	+	fermentation	* from API 20E
[Ref.: #68374]	D-glucose ChEBI	-	builds acid from	* from API ID32E
[Ref.: #68369]	D-glucose ChEBI	-	fermentation	* from API 20NE
[Ref.: #68369]	D-mannitol ChEBI	-	assimilation	* from API 20NE
[Ref.: #68374]	D-mannitol ChEBI	-	builds acid from	* from API ID32E
[Ref.: #68368]	D-mannitol ChEBI	-	fermentation	* from API 20E
[Ref.: #68369]	D-mannose ChEBI	-	assimilation	* from API 20NE
[Ref.: #68369]	decanoate ChEBI	+	assimilation	* from API 20NE
[Ref.: #68369]	esculin ChEBI	-	hydrolysis	* from API 20NE
[Ref.: #68369]	gelatin ChEBI	-	hydrolysis	* from API 20NE, API 20E
[Ref.: #68369]	gluconate ChEBI	-	assimilation	* from API 20NE
[Ref.: #117098]	glucose ChEBI	+/-	degradation
[Ref.: #68368]	L-arabinose ChEBI	+	fermentation	* from API 20E
[Ref.: #68369]	L-arabinose ChEBI	-	assimilation	* from API 20NE
[Ref.: #68374]	L-arabinose ChEBI	-	builds acid from	* from API ID32E
[Ref.: #68374]	L-arabitol ChEBI	-	builds acid from	* from API ID32E
[Ref.: #68374]	L-rhamnose ChEBI	-	builds acid from	* from API ID32E
[Ref.: #68368]	L-rhamnose ChEBI	-	fermentation	* from API 20E
[Ref.: #68368]	lysine ChEBI	-	degradation	* from API 20E, API ID32E
[Ref.: #68369]	malate ChEBI	+	assimilation	* from API 20NE
[Ref.: #68374]	malonate ChEBI	-	assimilation	* from API ID32E
[Ref.: #68369]	maltose ChEBI	-	assimilation	* from API 20NE
[Ref.: #68374]	maltose ChEBI	-	builds acid from	* from API ID32E
[Ref.: #68368]	melibiose ChEBI	+	fermentation	* from API 20E
[Ref.: #68374]	myo-inositol ChEBI	-	builds acid from	* from API ID32E
[Ref.: #68368]	myo-inositol ChEBI	-	fermentation	* from API 20E
[Ref.: #68369]	N-acetylglucosamine ChEBI	-	assimilation	* from API 20NE
[Ref.: #117098]	nitrate ChEBI	-	reduction
[Ref.: #117098]	nitrate ChEBI	-	respiration
[Ref.: #68369]	nitrate ChEBI	-	reduction	* from API 20NE, API 20E
[Ref.: #117098]	nitrite ChEBI	-	reduction
[Ref.: #68368]	ornithine ChEBI	-	degradation	* from API 20E, API ID32E
[Ref.: #68374]	palatinose ChEBI	-	builds acid from	* from API ID32E
[Ref.: #68374]	Potassium 5-ketogluconate ChEBI	-	builds acid from	* from API ID32E
[Ref.: #68374]	ribitol ChEBI	-	builds acid from	* from API ID32E
[Ref.: #68374]	sorbitol ChEBI	-	builds acid from	* from API ID32E
[Ref.: #68368]	sorbitol ChEBI	-	fermentation	* from API 20E
[Ref.: #68374]	sucrose ChEBI	-	builds acid from	* from API ID32E
[Ref.: #68368]	sucrose ChEBI	-	fermentation	* from API 20E
[Ref.: #68374]	trehalose ChEBI	-	builds acid from	* from API ID32E
[Ref.: #68369]	tryptophan ChEBI	-	energy source	* from API 20NE, API 20E, API ID32E
[Ref.: #68369]	urea ChEBI	-	hydrolysis	* from API 20NE, API 20E, API ID32E
	Only first 10 entries are displayed. Click here to see all.

	Metabolite	Production
[Ref.: #117098]	indole ChEBI	no
[Ref.: #68368]	acetoin ChEBI	yes	* from API 20E
[Ref.: #68368]	dinitrogen ChEBI	no	* from API 20E
[Ref.: #68368]	hydrogen sulfide ChEBI	no	* from API 20E
[Ref.: #68374]	indole ChEBI	no	* from API ID32E, API 20NE, API 20E
[Ref.: #68368]	nitrite ChEBI	no	* from API 20E

	Metabolite	Voges-Proskauer-test	Methylred-test	Indole test
[Ref.: #117098]	acetoin ChEBI	-
[Ref.: #117098]	glucose ChEBI		-
[Ref.: #68368]	acetoin ChEBI	+			* from API 20E
[Ref.: #68374]	indole ChEBI			-	* from API ID32E, API 20NE, API 20E

	Enzyme	Enzyme activity	EC number
[Ref.: #68382]	acid phosphatase	+	3.1.3.2	* from API zym
[Ref.: #68382]	alkaline phosphatase	+	3.1.3.1	* from API zym
[Ref.: #68382]	alpha-chymotrypsin	-	3.4.21.1	* from API zym
[Ref.: #68382]	alpha-fucosidase	-	3.2.1.51	* from API zym
[Ref.: #68374]	alpha-galactosidase	-	3.2.1.22	* from API ID32E, API zym
[Ref.: #68374]	alpha-glucosidase	-	3.2.1.20	* from API ID32E, API zym
[Ref.: #68374]	alpha-maltosidase	-		* from API ID32E
[Ref.: #68382]	alpha-mannosidase	-	3.2.1.24	* from API zym
[Ref.: #68374]	arginine dihydrolase	-	3.5.3.6	* from API ID32E, API 20NE, API 20E
[Ref.: #117098]	beta-galactosidase	-	3.2.1.23
[Ref.: #68374]	beta-galactosidase	-	3.2.1.23	* from API ID32E, API 20E, API zym
[Ref.: #68374]	beta-glucosidase	-	3.2.1.21	* from API ID32E, API 20NE, API zym
[Ref.: #68374]	beta-glucuronidase	-	3.2.1.31	* from API ID32E, API zym
[Ref.: #9083]	catalase	+	1.11.1.6
[Ref.: #117098]	catalase	+	1.11.1.6
[Ref.: #68382]	cystine arylamidase	-	3.4.11.3	* from API zym
[Ref.: #68369]	cytochrome oxidase	-	1.9.3.1	* from API 20NE
[Ref.: #9083]	cytochrome-c oxidase	-	1.9.3.1
[Ref.: #68382]	esterase (C 4)	+		* from API zym
[Ref.: #68382]	esterase lipase (C 8)	+		* from API zym
[Ref.: #117098]	gamma-glutamyltransferase	-	2.3.2.2
[Ref.: #117098]	gelatinase	-
[Ref.: #68369]	gelatinase	-		* from API 20NE, API 20E
[Ref.: #68374]	L-aspartate arylamidase	+	3.4.11.21	* from API ID32E
[Ref.: #68382]	leucine arylamidase	+	3.4.11.1	* from API zym
[Ref.: #68374]	lipase	-		* from API ID32E
[Ref.: #68382]	lipase (C 14)	-		* from API zym
[Ref.: #68374]	lysine decarboxylase	-	4.1.1.18	* from API ID32E, API 20E
[Ref.: #68374]	N-acetyl-beta-glucosaminidase	-	3.2.1.52	* from API ID32E, API zym
[Ref.: #68382]	naphthol-AS-BI-phosphohydrolase	+		* from API zym
[Ref.: #68374]	ornithine decarboxylase	-	4.1.1.17	* from API ID32E, API 20E
[Ref.: #117098]	oxidase	-
[Ref.: #68382]	trypsin	-	3.4.21.4	* from API zym
[Ref.: #68368]	tryptophan deaminase	-	4.1.99.1	* from API 20E
[Ref.: #117098]	urease	-	3.5.1.5
[Ref.: #68374]	urease	-	3.5.1.5	* from API ID32E, API 20NE, API 20E
[Ref.: #68382]	valine arylamidase	-		* from API zym
	Only first 10 entries are displayed. Click here to see all.

API® 20E:

Note that the displayed test results represent raw data and therefore may deviate!

	API ID	beta-GalactosidaseONPG	Arginine dihydrolaseADH (Arg)	Lysine decarboxylaseLDC (Lys)	Ornithine decarboxylaseODC	Citrate utilizationCIT	H2S productionH2S	Urease/urea hydrolysisURE	Tryptophan deaminaseTDA (Trp)	Indole productionIND	Acetoin production (Voges Proskauer test)VP	Gelatinase/gelatin hydrolysisGEL	Fermentation/oxidation of D-glucoseGLU	Fermentation/oxidation of D-mannitolMAN	Fermentation/oxidation of inositolINO	Fermentation/oxidation of sorbitolSor	Fermentation/oxidation of L-rhamnoseRHA	Fermentation/oxidation of sucroseSAC	Fermentation/oxidation of melibioseMEL	Fermentation/oxidation of amygdalinAMY	Fermentation/oxidation of L-arabinoseARA	Cytochrome oxidaseOX	Nitrite productionNO2	Reduction to N2N2	MotilityMOB	Growth on MacConkey mediumMAC	Oxidative catabolisation of D-glucoseOF-O	Fermentation of D-glucoseOF-F
[Ref.: #9083]	16851	-	-	-	-	-	-	-	-	-	+	-	+	-	-	-	-	-	+	-	+	+/-	-	-	not determinedn.d.	not determinedn.d.	not determinedn.d.	not determinedn.d.

API® 20NE:

Note that the displayed test results represent raw data and therefore may deviate!

	API ID	Reduction of nitratesNO3	Indole productionTRP	Fermentation of D-glucoseGLU_ Ferm	Arginine dihydrolaseADH (Arg)	Urease/urea hydrolysisURE	Esculin hydrolysis/beta-GlucosidaseESC	Gelatinase/gelatin hydrolysisGEL	beta-GalactosidasePNPG	Assimilation of D-glucoseGLU_ Assim	Assimilation of L-arabinoseARA	Assimilation of D-mannoseMNE	Assimilation of D-mannitolMAN	Assimilation of N-acetyl-glucosamineNAG	Assimilation of maltoseMAL	Assimilation of gluconateGNT	Assimilation of capric acidCAP	Assimilation adipic acidADI	Assimilation of malic acidMLT	Assimilation of citric acidCIT	Assimilation of phenyl-acetic acidPAC	Cytochrome oxidaseOX
[Ref.: #9083]	24476	-	-	-	-	-	-	-	-	+/-	-	-	-	-	-	-	+	+	+	+	+	-
[Ref.: #9083]	24091	-	-	-	-	-	-	-	-	+	-	-	-	-	-	-	+	+	+	+	+	not determinedn.d.
[Ref.: #9083]	24090	-	-	-	-	-	-	-	-	-	-	-	not determinedn.d.	-	-	-	+	+	+	+	+	not determinedn.d.
[Ref.: #9083]	24089	-	-	-	-	-	-	-	-	+/-	-	-	-	-	-	-	+	+	+	+	+	-

API® Biotype100:

Note that the displayed test results represent raw data and therefore may deviate!

	API ID	ControlQ	D-glucose as carbon sourceGLU	D-fructose as carbon sourceFRU	D-galactose as carbon sourceGAL	D-trehalose as carbon sourceTRE	D-mannose as carbon sourceMNE	L-sorbose as carbon sourceSBE	D-melibiose as carbon sourceMEL	sucrose as carbon sourceSAC	D-raffinose as carbon sourceRAF	maltotriose as carbon sourceMTE	maltose as carbon sourceMAL	lactose as carbon sourceLAC	lactulose as carbon sourceLTE	1-O-methyl-beta-galactopyranoside as carbon sourceMbGa	1-O-methyl-alpha-galactopyranoside as carbon sourceMaGa	D-cellobiose as carbon sourceCEL	gentiobiose as carbon sourceGEN	1-O-methyl-beta-D-glucopyranoside as carbon sourceMbGu	esculin as carbon sourceESC	D-ribose as carbon sourceRIB	L-arabinose as carbon sourceARA	D-xylose as carbon sourceXYL	palatinose as carbon sourcePLE	L-rhamnose as carbon sourceRHA	L-fucose as carbon sourceFUC	D-melezitose as carbon sourceMLZ	D-arabitol as carbon sourceDARL	L-arabitol as carbon sourceLARL	xylitol as carbon sourceXLT	dulcitol as carbon sourceDUL	D-tagatose as carbon sourceTAG	glycerol as carbon sourceGLY	myo-inositol as carbon sourceINO	D-mannitol as carbon sourceMAN	maltitol as carbon sourceMTL	D-turanose as carbon sourceTUR	D-sorbitol as carbon sourceSOR	adonitol as carbon sourceADO	hydroxyquinoline-beta-glucuronide as carbon sourceHBG	D-lyxose as carbon sourceLYX	i-erythritol as carbon sourceERY	1-O-methyl-alpha-D-glucoside as carbon sourceMDG	3-O-methyl-D-glucose as carbon source3MDG	D-saccharate as carbon sourceSAT	mucate as carbon sourceMUC	L-tartrate as carbon sourceLTAT	D-tartrate as carbon sourceDTAT	meso-tartrate as carbon sourceMTAT	D-malate as carbon sourceDMLT	L-malate as carbon sourceLMLT	cis-aconitate as carbon sourceCATE	trans-aconitate as carbon sourceTATE	tricarballylate as carbon sourceTTE	citrate as carbon sourceCIT	D-glucuronate as carbon sourceGRT	D-galacturonate as carbon sourceGAT	2-ketogluconate as carbon source2KG	5-ketogluconate as carbon source5KG	tryptophan as carbon sourceTRY	N-acetyl-D-glucosamine as carbon sourceNAG	D-gluconate as carbon sourceGNT	phenylacetate as carbon sourcePAC	protocatechuate as carbon sourcePAT	4-hydroxybenzoate as carbon sourcepOBE	quinate as carbon sourceQAT	gentisate as carbon sourceGTE	3-hydroxybenzoate as carbon sourcemOBE	benzoate as carbon sourceBAT	3-phenylpropionate as carbon sourcePPAT	m-coumarate as carbon sourceCMT	trigonelline as carbon sourceTGE	betaine as carbon sourceBET	putrescine as carbon sourcePCE	4-aminobutyrate as carbon sourceABT	histamine as carbon sourceHIN	DL-lactate as carbon sourceLAT	caprate as carbon sourceCAP	caprylate as carbon sourceCYT	L-histidine as carbon sourceHIS	succinate as carbon sourceSUC	fumarate as carbon sourceFUM	glutarate as carbon sourceGRE	DL-glycerate as carbon sourceGYT	5-aminovalerate as carbon sourceAVT	ethanolamine as carbon sourceETN	tryptamine as carbon sourceTTN	D-glucosamine as carbon sourceGLN	itaconate as carbon sourceITA	3-hydroxybutyrate as carbon source3OBU	L-aspartate as carbon sourceAPT	L-glutamate as carbon sourceGTT	L-proline as carbon sourcePRO	D-alanine as carbon sourceDALA	L-alanine as carbon sourceLALA	L-serine as carbon sourceSER	malonate as carbon sourceMNT	propionate as carbon sourcePROP	L-tyrosine as carbon sourceTYR	2-ketoglutarate as carbon source2KT
[Ref.: #117098]	3448	not determinedn.d.	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	+	+	+	+	+	-	-	-	-	+	-	-	-	+	+	+	-	-	+	+	+	-	-	+	+	-	+	-	+	+	+	+	+	-	-	-	-	-	-	+	+	+	+	+	+	-	+	+	+	+

API® ID32E:

Note that the displayed test results represent raw data and therefore may deviate!

	API ID	Ornithine decarboxylaseODC	Arginine dihydrolaseADH (Arg)	Lysine decarboxylaseLDC (Lys)	Urease/urea hydrolysisURE	Acid from L-arabitolLARL	Acid from D-galacturonic acidGAT	Acid from 5-Ketogluconate5KG	LipaseLIP	Phenol red (Acidification)RP	beta-Glucosidasebeta GLU	Acid from D-mannitolMAN	Acid from maltoseMAL	Acid from D-adonitolADO	Acid from palatinosePLE	beta-Glucuronidasebeta GUR	MalonateMNT	Indole productionIND	N-Acetyl-beta-Glucosaminidasebeta NAG	beta-Galactosidasebeta GAL	Acid from D-glucoseGLU	Acid from sucroseSAC	Acid from L-arabinoseLARA	Acid from D-arabitolDARL	alpha-Glucosidasealpha GLU	alpha-Galactosidasealpha GAL	Acid from trehaloseTRE	Acid from L-rhamnoseRHA	Acid from inositolINO	Acid from cellobioseCEL	Acid from sorbitolSOR	alpha-MaltosidasealphaMAL	L-aspartic acid arylamidaseAspA
[Ref.: #45829]	622	-	-	-	-	-	-	-	-	+	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	+

API® zym:

Note that the displayed test results represent raw data and therefore may deviate!

	API ID	Control	2-naphthyl phosphateAlkaline phosphatase	2-naphthyl butyrateEsterase (C 4)	2-naphtyl caprylateEsterase Lipase (C 8)	2-naphthyl myristateLipase (C 14)	L-leucyl-2-naphthylamideLeucine arylamidase	L-valyl-2-naphthylamideValine arylamidase	L-cystyl-2-naphthylamideCystine arylamidase	N-benzoyl-DL-arginine-2-naphthylamideTrypsin	N-glutaryl-phenylalanine-2-naphthylamidealpha- Chymotrypsin	2-naphthyl phosphateAcid phosphatase	Naphthol-AS-BI-phosphateNaphthol-AS-BI-phosphohydrolase	6-Br-2-naphthyl-alphaD-galactpyranosidealpha- Galactosidase	2-naphthyl-betaD-galactpyranosidebeta- Galactosidase	Naphthol-AS-BI-betaD-glucuronidebeta- Glucuronidase	2-naphthyl-alphaD-glucopyranosidealpha- Glucosidase	6-Br-2-naphthyl-betaD-glucopyranosidebeta- Glucosidase	1-naphthyl-N-acetyl-betaD-glucosaminideN-acetyl-beta- glucosaminidase	6-Br-2-naphthyl-alphaD-mannopyranosidealpha- Mannosidase	2-naphthyl-alphaL-fucopyranosidealpha- Fucosidase
[Ref.: #117098]	13507	-	+	+	+	-	+	-	-	-	-	+	+	-	-	-	-	-	-	-	-

Information on isolation source, the sampling and environmental conditions Isolation, sampling and environmental information

[Ref.: #9083]	Sample type/isolated from	quinate enrichment from soil

[Ref.: #45829]	Sample type/isolated from	Soil,quinate enrichment
[Ref.: #45829]	Sampling date	1909
[Ref.: #45829]	Geographic location (country and/or sea, region)	Delft
[Ref.: #45829]	Country	Netherlands
[Ref.: #45829]	Country ISO 3 Code	NLD
[Ref.: #45829]	Continent	Europe

[Ref.: #67770]	Sample type/isolated from	Soil

[Ref.: #117098]	Sample type/isolated from	Environment, Soil enriched with quinate
* marker position based on {}

Isolation sources categories

#Environmental

#Terrestrial

#Soil

What are isolation sources categories?

[Ref.: #69479]

Global distribution of 16S sequence X81661 (>99% sequence identity) for Acinetobacter from Microbeatlas

Aquatic Samples	12125
Soil Samples	7889
Animal Samples	20278
Plant Samples	5974
Total Samples	46266

Information on possible application of the strain and its possible interaction with e.g. potential hosts Safety information

[Ref.: #9083]	Biosafety level	2	Risk group (German classification) According to TRBA 466
[Ref.: #117098]	Biosafety level	1	Risk group (French classification)

Information on genomic background e.g. entries in nucleic sequence databass Sequence information

16S Sequence information:

Only first 5 entries are displayed. Click here to see all.

	Sequence accession description	Seq. accession number	Sequence length (bp)	Sequence database	Associated NCBI tax ID
[Ref.: #9083]	A.calcoaceticus 16S rRNA gene (DSM30006)	X81661	1460	GenBank ENA	981331 tax ID
[Ref.: #67770]	Acinetobacter calcoaceticus gene for 16S rRNA, partial sequence, strain: JCM 6842	AB626122	1460	GenBank ENA	471 tax ID
[Ref.: #67770]	Acinetobacter calcoaceticus partial 16S rRNA gene, type strain NCCB 22016	AJ888983	1516	GenBank ENA	983712 tax ID
[Ref.: #9083]	Acinetobacter calcoaceticus 16S rRNA gene, type strain DSM 30006T	AJ633632	1463	GenBank ENA	981331 tax ID
[Ref.: #67770]	Acinetobacter calcoaceticus 16S rRNA gene, type strain LMG 1046T	AJ633631	1462	GenBank ENA	471 tax ID
[Ref.: #20218]	Acinetobacter calcoaceticus genomic DNA containing 16S rRNA-23S rRNA IGS, strain ATCC 23055, clone 01	HE651573	639	GenBank ENA	471 tax ID	*
[Ref.: #20218]	Acinetobacter calcoaceticus genomic DNA containing 16S rRNA-23S rRNA IGS, strain ATCC 23055, clone 03	HE651574	639	GenBank ENA	471 tax ID	*
[Ref.: #20218]	Acinetobacter calcoaceticus genomic DNA containing 16S rRNA-23S rRNA IGS, strain ATCC 23055, clone 04	HE651575	639	GenBank ENA	471 tax ID	*
[Ref.: #20218]	Acinetobacter calcoaceticus genomic DNA containing 16S rRNA-23S rRNA IGS, strain ATCC 23055, clone 05	HE651576	639	GenBank ENA	471 tax ID	*
[Ref.: #20218]	Acinetobacter calcoaceticus genomic DNA containing 16S rRNA-23S rRNA IGS, strain ATCC 23055, clone 06	HE651577	639	GenBank ENA	471 tax ID	*
[Ref.: #20218]	Acinetobacter calcoaceticus genomic DNA containing 16S rRNA-23S rRNA IGS, strain ATCC 23055, clone 07	HE651578	639	GenBank ENA	471 tax ID	*
[Ref.: #20218]	Acinetobacter calcoaceticus genomic DNA containing 16S rRNA-23S rRNA IGS, strain ATCC 23055, clone 08	HE651579	639	GenBank ENA	471 tax ID	*
[Ref.: #20218]	Acinetobacter calcoaceticus genomic DNA containing 16S rRNA-23S rRNA IGS, strain ATCC 23055, clone 09	HE651580	639	GenBank ENA	471 tax ID	*
[Ref.: #20218]	Acinetobacter calcoaceticus genomic DNA containing 16S rRNA-23S rRNA IGS, strain ATCC 23055, clone 10	HE651581	639	GenBank ENA	471 tax ID	*
[Ref.: #20218]	Acinetobacter calcoaceticus genomic DNA containing 16S rRNA-23S rRNA IGS, strain ATCC 23055, clone 11	HE651582	639	GenBank ENA	471 tax ID	*
[Ref.: #20218]	Acinetobacter calcoaceticus genomic DNA containing 16S rRNA-23S rRNA IGS, strain ATCC 23055, clone 12	HE651583	639	GenBank ENA	471 tax ID	*
[Ref.: #20218]	Acinetobacter calcoaceticus genomic DNA containing 16S rRNA-23S rRNA IGS, strain ATCC 23055, clone 14	HE651584	639	GenBank ENA	471 tax ID	*
[Ref.: #20218]	Acinetobacter calcoaceticus genomic DNA containing 16S rRNA-23S rRNA IGS, strain ATCC 23055, clone 15	HE651585	639	GenBank ENA	471 tax ID	*
[Ref.: #124043]	Acinetobacter calcoaceticus partial 16S rRNA gene, type strain LMG 1046	AJ631191	449	GenBank ENA	471 tax ID	*
[Ref.: #20218]	Acinetobacter calcoaceticus 16S-23S ribosomal RNA intergenic spacer, including Ile-tRNA and Ala-tRNA genes	U60278	638	GenBank ENA	471 tax ID	*
[Ref.: #20218]	Acinetobacter calcoaceticus partial 16S rRNA gene, type strain ATCC 23055	AJ888984	1511	GenBank ENA	471 tax ID	*
[Ref.: #20218]	Acinetobacter calcoaceticus 16S rRNA gene, partial	AJ247199	452	GenBank ENA	981331 tax ID	*
[Ref.: #20218]	A.calcoaceticus 16S rRNA gene (strain ATCC 23055T)	Z93434	1417	GenBank ENA	471 tax ID	*
[Ref.: #20218]	Acinetobacter calcoaceticus strain DSM30006 16S ribosomal RNA gene, partial sequence	EF611409	452	GenBank ENA	981331 tax ID	*
[Ref.: #20218]	Acinetobacter calcoaceticus 16S rRNA gene, strain ATCC 23055	HE651903	1530	GenBank ENA	471 tax ID	*

Genome sequence information:

Only first 5 entries are displayed. Click here to see all.

	Sequence accession description	Seq. accession number	Assembly level	Sequence database	Associated NCBI tax ID
[Ref.: #67770]	Acinetobacter calcoaceticus DSM 30006 = CIP 81.8	GCA_000248175	contig	GenBank ENA	981331 tax ID
[Ref.: #67770]	Acinetobacter calcoaceticus DSM 30006 = CIP 81.8	GCA_000368965	scaffold	GenBank ENA	981331 tax ID
[Ref.: #67770]	Acinetobacter calcoaceticus KCTC 2357	GCA_000931735	contig	GenBank ENA	471 tax ID
[Ref.: #67770]	Acinetobacter calcoaceticus NCTC12983	GCA_900444805	contig	GenBank ENA	471 tax ID
[Ref.: #66792]	Acinetobacter calcoaceticus strain KCTC 2357	471.18	wgs	PATRIC	471 tax ID	*
[Ref.: #66792]	Acinetobacter calcoaceticus DSM 30006	2534682017	draft	JGI IMG/M	981331 tax ID	*

Data predicted using genome information as a basis Genome-based predictions

	Trait	Model	Prediction	Confidence in %	In training data
	Predictions from Diaspora project based on: Acinetobacter calcoaceticus DSM 30006 = CIP 81.8 PATRIC: 981331.5
[Ref.: #69480]	gram-positive	gram-positiveⓘ	no	98.5	no
[Ref.: #69480]	anaerobic	anaerobicⓘ	no	97.85	no
[Ref.: #69480]	aerobic	aerobicⓘ	yes	85.808	yes
[Ref.: #69480]	spore-forming	spore-formingⓘ	no	94.372	no
[Ref.: #69480]	thermophilic	thermophileⓘ	no	99	yes
[Ref.: #69480]	flagellated	motile2+ⓘ	no	77.968	no

Availability in culture collections External links

[Ref.: #9083]

Culture collection no.

DSM 30006, ATCC 23055, CIP 81.08, CIP 81.8, LMD 22.16, CCUG 12804, LMG 1046, IFO 13718, Delft L360, JCM 6842, CECT 441, IAM 12087, KCTC 2357, LMG 10511, NBIMCC 3730, NBRC 13718, NCCB 22016, NCIMB 10694, NCTC 12983, VTT E-981117, LMD 98116

[Ref.: #77485]

SI-ID 3966

Literature:

Only first 10 entries are displayed. Click here to see all.

	Title	Authors	Journal	DOI	Year
Phylogeny	Isolation and molecular identification of landfill bacteria capable of growing on di-(2-ethylhexyl) phthalate and deteriorating PVC materials.	Latorre I, Hwang S, Montalvo-Rodriguez R	J Environ Sci Health A Tox Hazard Subst Environ Eng	10.1080/10934529.2012.707549	2012	*
Metabolism	Influence of microbial interactions and EPS/polysaccharide composition on nutrient removal activity in biofilms formed by strains found in wastewater treatment systems.	Andersson S, Dalhammar G, Kuttuva Rajarao G	Microbiol Res	10.1016/j.micres.2010.08.005	2010	*
Phylogeny	Acinetobacter brisouii sp. nov., isolated from a wetland in Korea.	Anandham R, Weon HY, Kim SJ, Kim YS, Kim BY, Kwon SW	J Microbiol	10.1007/s12275-009-0132-8	2010	*
Phylogeny	Acinetobacter strains IH9 and OCI1, two rhizospheric phosphate solubilizing isolates able to promote plant growth, constitute a new genomovar of Acinetobacter calcoaceticus.	Peix A, Lang E, Verbarg S, Sproer C, Rivas R, Santa-Regina I, Mateos PF, Martinez-Molina E, Rodriguez-Barrueco C, Velazquez E	Syst Appl Microbiol	10.1016/j.syapm.2009.03.004	2009	*
Phylogeny	Reverse transcription of 16S rRNA to monitor ribosome-synthesizing bacterial populations in the environment.	Lu T, Stroot PG, Oerther DB	Appl Environ Microbiol	10.1128/AEM.02970-08	2009	*
Phylogeny	Acinetobacter sp. strain Ths, a novel psychrotolerant and alkalitolerant bacterium that utilizes hydrocarbon.	Yamahira K, Hirota K, Nakajima K, Morita N, Nodasaka Y, Yumoto I	Extremophiles	10.1007/s00792-008-0180-8	2008	*
Cultivation	Biofilm formation and interactions of bacterial strains found in wastewater treatment systems.	Andersson S, Kuttuva Rajarao G, Land CJ, Dalhammar G	FEMS Microbiol Lett	10.1111/j.1574-6968.2008.01149.x	2008	*
Enzymology	Cloning and expression of dipeptidase from Acinetobacter calcoaceticus ATCC 23055.	Adachi H, Tsujimoto M	J Biochem	10.1093/oxfordjournals.jbchem.a124945	1995	*
Enzymology	Purification and characterization of L-2,4-diaminobutyrate decarboxylase from Acinetobacter calcoaceticus.	Yamamoto S, Tsuzaki Y, Tougou K, Shinoda S	J Gen Microbiol	10.1099/00221287-138-7-1461	1992	*
Enzymology	Taxonomic studies of Acinetobacter species based on the electrophoretic analysis of enzymes.	Nishimura Y, Kanzaki H, Iizuka H	J Basic Microbiol	10.1002/jobm.3620280605	1988	*
	Novel Oxadiazole Thioglycosides as Potential Anti-Acinetobacter Agents.	Akbari Dilmaghani K, Nasuhi Pur F, Mahammad Pour M, Mahammad Nejad J	Iran J Pharm Res		2016	*
	Synthesis and Antibacterial Evaluation of New Thione Substituted 1,2,4-Triazole Schiff Bases as Novel Antimicrobial Agents.	Akbari Dilmaghani K, Nasuhi Pur F, Hatami Nezhad M	Iran J Pharm Res		2015	*

References

#9083

Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 30006

#20215

Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )

#20216

Leibniz-Institut für Naturstoff-Forschung und Infektionsbiologie e. V. Hans-Knöll-Institut (HKI) Curators of the HKI: Collection Description Leibniz-Institut für Naturstoff-Forschung und Infektionsbiologie e. V. Hans-Knöll-Institut (HKI) .

#20218

Verslyppe, B., De Smet, W., De Baets, B., De Vos, P., Dawyndt P.: StrainInfo introduces electronic passports for microorganisms.. Syst Appl Microbiol. 37: 42 - 50 2014 ( DOI 10.1016/j.syapm.2013.11.002 , PubMed 24321274 )

#42150 ; Curators of the CIP;
#45829 Culture Collection University of Gothenburg (CCUG) ; Curators of the CCUG; CCUG 12804

#66792

Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

#67770 Japan Collection of Microorganism (JCM) ; Curators of the JCM;

#68368

Automatically annotated from API 20E .

#68369

Automatically annotated from API 20NE .

#68374

Automatically annotated from API ID32E .

#68382

Automatically annotated from API zym .

#69479

João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta .

#69480

Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Predictions based on genome sequence made in the Diaspora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

#77485

Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.: StrainInfo: A central database for resolving microbial strain identifiers . ( DOI 10.60712/SI-ID3966.1 )

#117098 Collection of Institut Pasteur ; Curators of the CIP; CIP 81.8

#124043

Dr. Isabel Schober, Dr. Julia Koblitz: Data extracted from sequence databases, automatically matched based on designation and taxonomy .

* These data were automatically processed and therefore are not curated

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Acinetobacter calcoaceticus DSM 30006 = CIP 81.8

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