Name: Micromonospora peucetia B-211
Creator: BacDive
License: http://creativecommons.org/licenses/by-nc/4.0/

Strain identifier

BacDive ID: 7994

Type strain:

Species: Micromonospora peucetia

Strain Designation: B-211

Culture col. no.: DSM 43363, JCM 12820, NBRC 101886

Strain history: DSM 43363 <-- A. Grein B-211.

NCBI tax ID(s): 47871 (species)

SI-ID 87949

DSM 43363, JCM 12820, NBRC 101886

Section

Micromonospora peucetia B-211 is a spore-forming, mesophilic bacterium that was isolated from soil.

spore-forming
mesophilic
16S sequence
Bacteria
genome sequence

Information on the name and the taxonomic classification. Name and taxonomic classification

	Last LPSN update	14-12-2023 (DD-MM-YYYY)
	Domain	"Bacteria"
	Phylum	*Actinomycetota*
	Class	*Actinomycetes*
	Order	*Micromonosporales*
	Family	*Micromonosporaceae*
	Genus	*Micromonospora*
	Species	**Micromonospora peucetia**
	Full Scientific Name (LPSN)	Micromonospora peucetia Kroppenstedt et al. 2005

Synonym

"Micromonospora peucetica"

Information on morphological and physiological properties Morphology

[Ref.: #69480]	Gram stain	positive Confidence in %100

[Ref.: #69480]	Motility	no Confidence in %92.036

Information on culture and growth conditions Culture and growth conditions

[Ref.: #10983]

Culture medium

GYM STREPTOMYCES MEDIUM (DSMZ Medium 65)

[Ref.: #10983]

Culture medium growth

[Ref.: #10983]

Culture medium link

Medium recipe at MediaDive

[Ref.: #10983]

Culture medium composition

expand / minimize

	Temperatures	Kind of temperature		Temperature
[Ref.: #10983]			growth	28 °C
[Ref.: #67770]			growth	28 °C

[Ref.: #10983]	Temperature range	mesophilic
[Ref.: #67770]	Temperature range	mesophilic

Information on physiology and metabolism Physiology and metabolism

[Ref.: #69481]	Ability of spore formation	yes Confidence in %100
[Ref.: #69480]	Ability of spore formation	yes Confidence in %100

[Ref.: #67770]

Observation

quinones: MK-9(H₄)

	Metabolite	Utilization activity
[Ref.: #18487]	arabinose ChEBI	-
[Ref.: #18487]	cellulose ChEBI	+
[Ref.: #18487]	fructose ChEBI	+
[Ref.: #18487]	glucose ChEBI	+
[Ref.: #18487]	mannitol ChEBI	-
[Ref.: #18487]	myo-inositol ChEBI	-
[Ref.: #18487]	raffinose ChEBI	-
[Ref.: #18487]	rhamnose ChEBI	-
[Ref.: #18487]	sucrose ChEBI	+
[Ref.: #18487]	xylose ChEBI	-

	Metabolite production	Metabolite	Production
[Ref.: #67770]		doxorubicin ChEBI	yes

	Enzyme	Enzyme activity	EC number
[Ref.: #68382]	acid phosphatase	+	3.1.3.2	* from API zym
[Ref.: #68382]	alkaline phosphatase	+	3.1.3.1	* from API zym
[Ref.: #68382]	alpha-chymotrypsin	+	3.4.21.1	* from API zym
[Ref.: #68382]	alpha-fucosidase	-	3.2.1.51	* from API zym
[Ref.: #68382]	alpha-galactosidase	-	3.2.1.22	* from API zym
[Ref.: #68382]	alpha-glucosidase	+	3.2.1.20	* from API zym
[Ref.: #68382]	alpha-mannosidase	-	3.2.1.24	* from API zym
[Ref.: #68382]	beta-galactosidase	-	3.2.1.23	* from API zym
[Ref.: #68382]	beta-glucosidase	-	3.2.1.21	* from API zym
[Ref.: #68382]	beta-glucuronidase	-	3.2.1.31	* from API zym
[Ref.: #68382]	cystine arylamidase	-	3.4.11.3	* from API zym
[Ref.: #68382]	esterase (C 4)	+		* from API zym
[Ref.: #68382]	esterase lipase (C 8)	+		* from API zym
[Ref.: #68382]	leucine arylamidase	+	3.4.11.1	* from API zym
[Ref.: #68382]	lipase (C 14)	-		* from API zym
[Ref.: #68382]	N-acetyl-beta-glucosaminidase	+	3.2.1.52	* from API zym
[Ref.: #68382]	naphthol-AS-BI-phosphohydrolase	+		* from API zym
[Ref.: #68382]	trypsin	-	3.4.21.4	* from API zym
[Ref.: #68382]	valine arylamidase	+		* from API zym
	Only first 10 entries are displayed. Click here to see all.

API® zym:

Note that the displayed test results represent raw data and therefore may deviate!

	API ID	Control	2-naphthyl phosphateAlkaline phosphatase	2-naphthyl butyrateEsterase (C 4)	2-naphtyl caprylateEsterase Lipase (C 8)	2-naphthyl myristateLipase (C 14)	L-leucyl-2-naphthylamideLeucine arylamidase	L-valyl-2-naphthylamideValine arylamidase	L-cystyl-2-naphthylamideCystine arylamidase	N-benzoyl-DL-arginine-2-naphthylamideTrypsin	N-glutaryl-phenylalanine-2-naphthylamidealpha- Chymotrypsin	2-naphthyl phosphateAcid phosphatase	Naphthol-AS-BI-phosphateNaphthol-AS-BI-phosphohydrolase	6-Br-2-naphthyl-alphaD-galactpyranosidealpha- Galactosidase	2-naphthyl-betaD-galactpyranosidebeta- Galactosidase	Naphthol-AS-BI-betaD-glucuronidebeta- Glucuronidase	2-naphthyl-alphaD-glucopyranosidealpha- Glucosidase	6-Br-2-naphthyl-betaD-glucopyranosidebeta- Glucosidase	1-naphthyl-N-acetyl-betaD-glucosaminideN-acetyl-beta- glucosaminidase	6-Br-2-naphthyl-alphaD-mannopyranosidealpha- Mannosidase	2-naphthyl-alphaL-fucopyranosidealpha- Fucosidase
[Ref.: #18487]	185	not determinedn.d.	+	+	+	-	+	+	-	-	+	+	+	-	-	-	+	-	+	-	-

Information on isolation source, the sampling and environmental conditions Isolation, sampling and environmental information

[Ref.: #10983]	Sample type/isolated from	soil

[Ref.: #67770]	Sample type/isolated from	Soil
* marker position based on {}

Isolation sources categories

#Environmental

#Terrestrial

#Soil

What are isolation sources categories?

Information on possible application of the strain and its possible interaction with e.g. potential hosts Safety information

[Ref.: #18487]	Biosafety level	1	German classification
[Ref.: #10983]	Biosafety level	1	Risk group (German classification) According to TRBA 466

Information on genomic background e.g. entries in nucleic sequence databass Sequence information

16S Sequence information:

	Sequence accession description	Seq. accession number	Sequence length (bp)	Sequence database	Associated NCBI tax ID
[Ref.: #10983]	Micromonospora peucetia 16S rRNA gene, type strain DSM 43363	X92603	1477	ENA	47871 tax ID

Genome sequence information:

	Sequence accession description	Seq. accession number	Assembly level	Sequence database	Associated NCBI tax ID
[Ref.: #67770]	Micromonospora peucetia DSM 43363	GCA_900091625	contig	GenBank	47871 tax ID
[Ref.: #66792]	Micromonospora peucetia strain DSM 43363	47871.4	wgs	PATRIC	47871 tax ID	*
[Ref.: #66792]	Micromonospora peucetia DSM 43363	2622736606	draft	JGI IMG/M	47871 tax ID	*

[Ref.: #67770]

GC-content

72.28 mol%

genome sequence analysis

Data predicted using genome information as a basis Genome-based predictions

	Trait	Prediction	Confidence in %	In training data
	Predictions from GenomeNet Sporulation v. 1 based on: Micromonospora peucetia strain DSM 43363 PATRIC: 47871.4
[Ref.: #69481]	spore-forming	yes	100	no

	Trait	Prediction	Confidence in %	In training data
	Predictions from Diaspora project based on: Micromonospora peucetia strain DSM 43363 PATRIC: 47871.4
[Ref.: #69480]	gram-positive	yes	89.681	no
[Ref.: #69480]	anaerobic	no	99.341	no
[Ref.: #69480]	halophile	no	93.851	no
[Ref.: #69480]	spore-forming	yes	94.809	no
[Ref.: #69480]	glucose-util	yes	87.154	no
[Ref.: #69480]	aerobic	yes	96.658	no
[Ref.: #69480]	motile	no	95.1	no
[Ref.: #69480]	flagellated	no	97.259	no
[Ref.: #69480]	thermophile	no	98.489	yes
[Ref.: #69480]	glucose-ferment	no	92.176	no

Availability in culture collections External links

[Ref.: #10983]

Culture collection no.

DSM 43363, JCM 12820, NBRC 101886

[Ref.: #77424]

SI-ID 87949

Literature:

Topic	Title	Authors	Journal	DOI	Year
Phylogeny	Micromonospora musae sp. nov., an endophytic actinomycete isolated from roots of Musa species.	Kuncharoen N, Kudo T, Yuki M, Okuma M, Booncharoen A, Tanasupawat S	Syst Appl Microbiol	10.1016/j.syapm.2019.126020	2019	*
Phylogeny	Description of Verrucosispora qiuiae sp. nov., isolated from mangrove swamp sediment, and emended description of the genus Verrucosispora.	Xi L, Zhang L, Ruan J, Huang Y	Int J Syst Evol Microbiol	10.1099/ijs.0.033787-0	2011	*
Phylogeny	Eight new species of the genus Micromonospora, Micromonospora citrea sp. nov., Micromonospora echinaurantiaca sp. nov., Micromonospora echinofusca sp. nov. Micromonospora fulviviridis sp. nov., Micromonospora inyonensis sp. nov., Micromonospora peucetia sp. nov., Micromonospora sagamiensis sp. nov., and Micromonospora viridifaciens sp. nov.	Kroppenstedt RM, Mayilraj S, Wink JM, Kallow W, Schumann P, Secondini C, Stackebrandt E	Syst Appl Microbiol	10.1016/j.syapm.2004.12.011	2005	*

References

#10983

Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 43363

#18487

Wink, J.: Compendium of Actinobacteria. HZI-Helmholtz-Centre for Infection Research, Braunschweig .

#20215

Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )

#66792

Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

#67770 Japan Collection of Microorganism (JCM) ; Curators of the JCM;

#68382

Automatically annotated from API zym .

#69480

Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Predictions based on genome sequence made in the Diaspora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

#69481

Xiao-Yin To, René Mreches, Martin Binder, Alice C. McHardy, Philipp C. Münch: Predictions based on the model GenomeNet Sporulation v. 1 . ( DOI 10.21203/rs.3.rs-2527258/v1 )

#77424

Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.: StrainInfo: A central database for resolving microbial strain identifiers . ( DOI 10.60712/SI-ID87949.1 )

* These data were automatically processed and therefore are not curated

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Micromonospora peucetia strain DSM 43363

Micromonospora peucetia strain DSM 43363

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