Micromonospora olivasterospora MK-70 is a bacterium that builds an aerial mycelium and was isolated from soil, paddy field.
genome sequence 16S sequence Bacteria| @ref 20215 |
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| Domain Bacteria |
| Phylum Actinomycetota |
| Class Actinomycetes |
| Order Micromonosporales |
| Family Micromonosporaceae |
| Genus Micromonospora |
| Species Micromonospora olivasterospora |
| Full scientific name Micromonospora olivasterospora Kawamoto et al. 1983 |
| Synonyms (1) |
| @ref: | 11349 |
| multimedia content: | DSM_43868_MilliQ.jpg |
| multimedia.multimedia content: | https://www.dsmz.de/microorganisms/photos/DSM_43868_MilliQ.jpg |
| caption: | MilliQ |
| intellectual property rights: | © Leibniz-Institut DSMZ |
| manual_annotation: | 1 |
| @ref: | 11349 |
| multimedia content: | DSM_43868-1_destH2O.jpg |
| multimedia.multimedia content: | https://www.dsmz.de/microorganisms/photos/DSM_43868-1_destH2O.jpg |
| caption: | destH2O |
| intellectual property rights: | © Leibniz-Institut DSMZ |
| manual_annotation: | 1 |
| @ref: | 11349 |
| multimedia content: | DSM_43868-2.jpg |
| multimedia.multimedia content: | https://www.dsmz.de/microorganisms/photos/DSM_43868-2.jpg |
| intellectual property rights: | © Leibniz-Institut DSMZ |
| manual_annotation: | 1 |
| @ref: | 11349 |
| multimedia content: | DSM_43868-3.jpg |
| multimedia.multimedia content: | https://www.dsmz.de/microorganisms/photos/DSM_43868-3.jpg |
| intellectual property rights: | © Leibniz-Institut DSMZ |
| manual_annotation: | 1 |
| @ref: | 11349 |
| multimedia content: | DSM_43868.jpg |
| multimedia.multimedia content: | https://www.dsmz.de/microorganisms/photos/DSM_43868.jpg |
| caption: | Medium 65 28°C |
| intellectual property rights: | © Leibniz-Institut DSMZ |
| manual_annotation: | 1 |
| @ref | Name | Growth | Medium link | Composition | |
|---|---|---|---|---|---|
| 11349 | GYM STREPTOMYCES MEDIUM (DSMZ Medium 65) | Medium recipe at MediaDive | Name: GYM STREPTOMYCES MEDIUM (DSMZ Medium 65) Composition: Agar 18.0 g/l Malt extract 10.0 g/l Yeast extract 4.0 g/l Glucose 4.0 g/l CaCO3 2.0 g/l Distilled water | ||
| 19611 | ISP 2 | Name: ISP 2 / Yeast Malt Agar (5265); 5265 Composition Malt extract 10.0 g/l Yeast extract 4.0 g/l Glucose 4.0 g/l Agar 15.0 g/l Preparation: Sterilisation: 20 minutes at 121°C pH before sterilisation: 7.0 Usage: Maintenance and Taxonomy Organisms: All Actinomycetes | |||
| 19611 | ISP 3 | Name: ISP 3; 5315 Composition Dog oat flakes 20.0 g/l Trace element solution (5314) 2.5 ml/l Agar 18.0 g/l Preparation: Oat flakes are cooked for 20 minutes, trace element solution and agar are added (in the case of non rolled oat flakes the suspension has to bee filtrated). Sterilisation: 20 minutes at 121°C pH before sterilisation: 7.8 Usage: Maintenance and taxonomy (e.g. SEM As liquid medium for metabolite production) Organisms: All Actinomycetes Trace element solution 5314 Name: Trace element solution 5314; 5314 Composition CaCl2 x H2O 3.0 g/l Fe-III-citrate 1.0 g/l MnSO4 0.2 g/l ZnCl2 0.1 g/l CuSO4 x 5 H2O 0.025 g/l Sodium tetra borate 0.2 g/l CoCl2 x 6 H2O 0.004 g/l Sodium molybdate 0.01 g/l Preparation: Use double destillated water. Sterilisation: 20 minutes at 121°C pH before sterilisation: Usage: Trace element solution for different media Organisms: | |||
| 19611 | ISP 4 | Name: ISP 4; DSM 547 Solution I: Difco soluble starch, 10.0 g. Make a paste of the starch with a small amount of cold distilled water and bring to a volume of 500 ml. Solution II: CaCO3 2.0 g K2HPO4 (anhydrous) 1.0 g MgSO4 x 7 H2O 1.0 g NaCl 1.0 g (NH4)2SO4 2.0 g Distilled water 500.0 ml Trace salt solution (see below) 1.0 ml The pH should be between 7.0 and 7.4. Do not adjust if it is within this range. Mix solutions I and II together. Add 20.0 g agar. Liquify agar by steaming at 100°C for 10 to 20 min. Trace element solution: FeSO4 x 7 H2O 0.1 g MnCl2 x 4 H2O 0.1 g ZnSO4 x 7 H2O 0.1 g Distilled water 100.0 ml | |||
| 19611 | ISP 5 | Name: ISP 5 (5323) Composition L-Asparagine 1.0 g/l Glycerol 10.0 g/l K2HPO4 1.0 g/l Salt solution (see preparation) 1.0 ml/l Agar 20.0 g/l Preparation: Salt solution 1.0 g FeSO4 x 7 H2O 1.0 g MnCl2 x 4 H2O 1.0 g ZNSO4 x 7 H2O in 100 ml water Sterilisation: 20 minutes at 121°C pH before sterilisation: 7.2 Usage: Maintenance and taxonomy Organisms: All Actinomycetes | |||
| 19611 | ISP 6 | Name: ISP 6 (5318) Composition Peptone 15.0 g/l Proteose peptose 5.0 g/l Ferric ammonium citrate 0.5 g/l Sodium glycerophosphate 1.0 g/l Sodium thiosulfate 0.08 g/l Yeast extract 1.0 g/l Agar 15.0 g/l Sterilisation: 20 minutes at 121°C pH before sterilisation: Usage: Production of melanoid pigments Organisms: All Actinomycetes | |||
| 19611 | ISP 7 | Name: ISP 7 (5322) Composition Glycerol 15.0 g/l L-Tyrosine 0.5 g/l L-Asparagine 1.0 g/l K2HPO4 0.5 g/l NaCl 0.5 g/l FeSO4 x 7 H2O 0.01 g/l Trace element solution 5343 1.0 ml/l Agar 20.0 Sterilisation: 20 minutes at 121°C pH before sterilisation: 7.3 Usage: Production of melanoid pigments Organisms: All Actinomycetes | |||
| 11349 | ROLLED OATS MINERAL MEDIUM (DSMZ Medium 84) | Medium recipe at MediaDive | Name: ROLLED OATS MINERAL MEDIUM (DSMZ Medium 84) Composition: Agar 20.0 g/l Rolled oats 20.0 g/l ZnSO4 x 7 H2O 0.001 g/l MnCl2 x 4 H2O 0.001 g/l FeSO4 x 7 H2O 0.001 g/l Distilled water |
| @ref | Ability | Type | PH | PH range | |
|---|---|---|---|---|---|
| 19611 | positive | minimum | 3.5 | acidophile |
| @ref | Oxygen tolerance | Confidence | |
|---|---|---|---|
| 125439 | obligate aerobe | 98.821 |
| @ref | Spore formation | Confidence | |
|---|---|---|---|
| 125439 | 95.476 |
| 11349 | Compoundfortimicin B |
| @ref | Salt | Growth | Tested relation | Concentration | |
|---|---|---|---|---|---|
| 19611 | NaCl | positive | growth | 0 % |
| @ref | Compound | Percentage | |
|---|---|---|---|
| 19611 | Lysozyme | 0 |
| @ref | Chebi-ID | Metabolite | Utilization activity | Kind of utilization tested | |
|---|---|---|---|---|---|
| 19611 | 22599 ChEBI | arabinose | +/- | ||
| 68368 | 29016 ChEBI | arginine | + | hydrolysis | from API 20E |
| 19611 | 62968 ChEBI | cellulose | +/- | ||
| 68368 | 16947 ChEBI | citrate | + | assimilation | from API 20E |
| 19611 | 28757 ChEBI | fructose | +/- | ||
| 68368 | 5291 ChEBI | gelatin | + | hydrolysis | from API 20E |
| 19611 | 17234 ChEBI | glucose | +/- | ||
| 68368 | 25094 ChEBI | lysine | - | degradation | from API 20E |
| 19611 | 29864 ChEBI | mannitol | +/- | ||
| 19611 | 17268 ChEBI | myo-inositol | +/- | ||
| 68368 | 18257 ChEBI | ornithine | - | degradation | from API 20E |
| 19611 | 16634 ChEBI | raffinose | +/- | ||
| 19611 | 26546 ChEBI | rhamnose | +/- | ||
| 19611 | 17992 ChEBI | sucrose | +/- | ||
| 68368 | 27897 ChEBI | tryptophan | - | energy source | from API 20E |
| 68368 | 16199 ChEBI | urea | + | hydrolysis | from API 20E |
| 19611 | 18222 ChEBI | xylose | +/- |
| @ref | Value | Activity | Ec | |
|---|---|---|---|---|
| 68382 | acid phosphatase | + | 3.1.3.2 | from API zym |
| 68382 | alkaline phosphatase | + | 3.1.3.1 | from API zym |
| 68382 | alpha-chymotrypsin | - | 3.4.21.1 | from API zym |
| 68382 | alpha-fucosidase | - | 3.2.1.51 | from API zym |
| 68382 | alpha-galactosidase | - | 3.2.1.22 | from API zym |
| 68382 | alpha-glucosidase | + | 3.2.1.20 | from API zym |
| 68382 | alpha-mannosidase | - | 3.2.1.24 | from API zym |
| 68368 | arginine dihydrolase | + | 3.5.3.6 | from API 20E |
| 68382 | beta-galactosidase | - | 3.2.1.23 | from API zym |
| 68368 | beta-galactosidase | - | 3.2.1.23 | from API 20E |
| 68382 | beta-glucosidase | + | 3.2.1.21 | from API zym |
| 68382 | beta-glucuronidase | - | 3.2.1.31 | from API zym |
| 68382 | cystine arylamidase | - | 3.4.11.3 | from API zym |
| 68382 | esterase (C 4) | + | from API zym | |
| 68382 | esterase lipase (C 8) | + | from API zym | |
| 68368 | gelatinase | + | from API 20E | |
| 68382 | leucine arylamidase | + | 3.4.11.1 | from API zym |
| 68382 | lipase (C 14) | - | from API zym | |
| 68368 | lysine decarboxylase | - | 4.1.1.18 | from API 20E |
| 68382 | N-acetyl-beta-glucosaminidase | + | 3.2.1.52 | from API zym |
| 68382 | naphthol-AS-BI-phosphohydrolase | + | from API zym | |
| 68368 | ornithine decarboxylase | - | 4.1.1.17 | from API 20E |
| 68382 | trypsin | + | 3.4.21.4 | from API zym |
| 68368 | tryptophan deaminase | - | 4.1.99.1 | from API 20E |
| 68368 | urease | + | 3.5.1.5 | from API 20E |
| 68382 | valine arylamidase | - | from API zym |
| @ref | pathway | enzyme coverage | annotated reactions | external links | |
|---|---|---|---|---|---|
| 66794 | cellulose degradation | 100 | 5 of 5 | ||
| 66794 | threonine metabolism | 100 | 10 of 10 | ||
| 66794 | ethanol fermentation | 100 | 2 of 2 | ||
| 66794 | aspartate and asparagine metabolism | 100 | 9 of 9 | ||
| 66794 | adipate degradation | 100 | 2 of 2 | ||
| 66794 | palmitate biosynthesis | 100 | 22 of 22 | ||
| 66794 | ppGpp biosynthesis | 100 | 4 of 4 | ||
| 66794 | methylglyoxal degradation | 100 | 5 of 5 | ||
| 66794 | valine metabolism | 100 | 9 of 9 | ||
| 66794 | phenylmercury acetate degradation | 100 | 2 of 2 | ||
| 66794 | acetate fermentation | 100 | 4 of 4 | ||
| 66794 | starch degradation | 100 | 10 of 10 | ||
| 66794 | biotin biosynthesis | 100 | 4 of 4 | ||
| 66794 | CMP-KDO biosynthesis | 100 | 4 of 4 | ||
| 66794 | cardiolipin biosynthesis | 100 | 7 of 7 | ||
| 66794 | anapleurotic synthesis of oxalacetate | 100 | 1 of 1 | ||
| 66794 | suberin monomers biosynthesis | 100 | 2 of 2 | ||
| 66794 | UDP-GlcNAc biosynthesis | 100 | 3 of 3 | ||
| 66794 | folate polyglutamylation | 100 | 1 of 1 | ||
| 66794 | CDP-diacylglycerol biosynthesis | 100 | 2 of 2 | ||
| 66794 | sulfopterin metabolism | 100 | 4 of 4 | ||
| 66794 | molybdenum cofactor biosynthesis | 100 | 9 of 9 | ||
| 66794 | coenzyme A metabolism | 100 | 4 of 4 | ||
| 66794 | formaldehyde oxidation | 100 | 3 of 3 | ||
| 66794 | glycine betaine biosynthesis | 100 | 5 of 5 | ||
| 66794 | phenylacetate degradation (aerobic) | 100 | 5 of 5 | ||
| 66794 | 1,4-dihydroxy-6-naphthoate biosynthesis | 100 | 6 of 6 | ||
| 66794 | cis-vaccenate biosynthesis | 100 | 2 of 2 | ||
| 66794 | glycolysis | 94.12 | 16 of 17 | ||
| 66794 | leucine metabolism | 92.31 | 12 of 13 | ||
| 66794 | phenylalanine metabolism | 92.31 | 12 of 13 | ||
| 66794 | pentose phosphate pathway | 90.91 | 10 of 11 | ||
| 66794 | CO2 fixation in Crenarchaeota | 88.89 | 8 of 9 | ||
| 66794 | NAD metabolism | 88.89 | 16 of 18 | ||
| 66794 | chorismate metabolism | 88.89 | 8 of 9 | ||
| 66794 | serine metabolism | 88.89 | 8 of 9 | ||
| 66794 | isoleucine metabolism | 87.5 | 7 of 8 | ||
| 66794 | C4 and CAM-carbon fixation | 87.5 | 7 of 8 | ||
| 66794 | peptidoglycan biosynthesis | 86.67 | 13 of 15 | ||
| 66794 | propanol degradation | 85.71 | 6 of 7 | ||
| 66794 | photosynthesis | 85.71 | 12 of 14 | ||
| 66794 | ubiquinone biosynthesis | 85.71 | 6 of 7 | ||
| 66794 | tetrahydrofolate metabolism | 85.71 | 12 of 14 | ||
| 66794 | reductive acetyl coenzyme A pathway | 85.71 | 6 of 7 | ||
| 66794 | vitamin B12 metabolism | 85.29 | 29 of 34 | ||
| 66794 | selenocysteine biosynthesis | 83.33 | 5 of 6 | ||
| 66794 | glycolate and glyoxylate degradation | 83.33 | 5 of 6 | ||
| 66794 | purine metabolism | 80.85 | 76 of 94 | ||
| 66794 | methionine metabolism | 80.77 | 21 of 26 | ||
| 66794 | lipid metabolism | 80.65 | 25 of 31 | ||
| 66794 | metabolism of amino sugars and derivatives | 80 | 4 of 5 | ||
| 66794 | 3-chlorocatechol degradation | 80 | 4 of 5 | ||
| 66794 | hydrogen production | 80 | 4 of 5 | ||
| 66794 | flavin biosynthesis | 80 | 12 of 15 | ||
| 66794 | factor 420 biosynthesis | 80 | 4 of 5 | ||
| 66794 | propionate fermentation | 80 | 8 of 10 | ||
| 66794 | myo-inositol biosynthesis | 80 | 8 of 10 | ||
| 66794 | ethylmalonyl-CoA pathway | 80 | 4 of 5 | ||
| 66794 | alanine metabolism | 79.31 | 23 of 29 | ||
| 66794 | histidine metabolism | 79.31 | 23 of 29 | ||
| 66794 | tryptophan metabolism | 78.95 | 30 of 38 | ||
| 66794 | heme metabolism | 78.57 | 11 of 14 | ||
| 66794 | glutathione metabolism | 78.57 | 11 of 14 | ||
| 66794 | glutamate and glutamine metabolism | 78.57 | 22 of 28 | ||
| 66794 | citric acid cycle | 78.57 | 11 of 14 | ||
| 66794 | pyrimidine metabolism | 75.56 | 34 of 45 | ||
| 66794 | cyclohexanol degradation | 75 | 3 of 4 | ||
| 66794 | glycogen biosynthesis | 75 | 3 of 4 | ||
| 66794 | 6-hydroxymethyl-dihydropterin diphosphate biosynthesis | 75 | 6 of 8 | ||
| 66794 | arginine metabolism | 75 | 18 of 24 | ||
| 66794 | gluconeogenesis | 75 | 6 of 8 | ||
| 66794 | ketogluconate metabolism | 75 | 6 of 8 | ||
| 66794 | butanoate fermentation | 75 | 3 of 4 | ||
| 66794 | non-pathway related | 73.68 | 28 of 38 | ||
| 66794 | 3-phenylpropionate degradation | 73.33 | 11 of 15 | ||
| 66794 | proline metabolism | 72.73 | 8 of 11 | ||
| 66794 | tyrosine metabolism | 71.43 | 10 of 14 | ||
| 66794 | oxidative phosphorylation | 70.33 | 64 of 91 | ||
| 66794 | 4-hydroxyphenylacetate degradation | 70 | 7 of 10 | ||
| 66794 | Entner Doudoroff pathway | 70 | 7 of 10 | ||
| 66794 | vitamin B1 metabolism | 69.23 | 9 of 13 | ||
| 66794 | isoprenoid biosynthesis | 69.23 | 18 of 26 | ||
| 66794 | urea cycle | 69.23 | 9 of 13 | ||
| 66794 | degradation of sugar alcohols | 68.75 | 11 of 16 | ||
| 66794 | carotenoid biosynthesis | 68.18 | 15 of 22 | ||
| 66794 | 4-hydroxymandelate degradation | 66.67 | 6 of 9 | ||
| 66794 | octane oxidation | 66.67 | 2 of 3 | ||
| 66794 | L-lactaldehyde degradation | 66.67 | 2 of 3 | ||
| 66794 | d-mannose degradation | 66.67 | 6 of 9 | ||
| 66794 | cysteine metabolism | 66.67 | 12 of 18 | ||
| 66794 | (5R)-carbapenem carboxylate biosynthesis | 66.67 | 2 of 3 | ||
| 66794 | acetoin degradation | 66.67 | 2 of 3 | ||
| 66794 | acetyl CoA biosynthesis | 66.67 | 2 of 3 | ||
| 66794 | phenol degradation | 65 | 13 of 20 | ||
| 66794 | metabolism of disaccharids | 63.64 | 7 of 11 | ||
| 66794 | d-xylose degradation | 63.64 | 7 of 11 | ||
| 66794 | dTDPLrhamnose biosynthesis | 62.5 | 5 of 8 | ||
| 66794 | lysine metabolism | 61.9 | 26 of 42 | ||
| 66794 | phosphatidylethanolamine bioynthesis | 61.54 | 8 of 13 | ||
| 66794 | vitamin K metabolism | 60 | 3 of 5 | ||
| 66794 | elloramycin biosynthesis | 60 | 3 of 5 | ||
| 66794 | arachidonate biosynthesis | 60 | 3 of 5 | ||
| 66794 | glycogen metabolism | 60 | 3 of 5 | ||
| 66794 | lipoate biosynthesis | 60 | 3 of 5 | ||
| 66794 | aclacinomycin biosynthesis | 57.14 | 4 of 7 | ||
| 66794 | degradation of pentoses | 57.14 | 16 of 28 | ||
| 66794 | daunorubicin biosynthesis | 55.56 | 5 of 9 | ||
| 66794 | cholesterol biosynthesis | 54.55 | 6 of 11 | ||
| 66794 | aminopropanol phosphate biosynthesis | 50 | 1 of 2 | ||
| 66794 | degradation of aromatic, nitrogen containing compounds | 50 | 6 of 12 | ||
| 66794 | mannosylglycerate biosynthesis | 50 | 1 of 2 | ||
| 66794 | toluene degradation | 50 | 2 of 4 | ||
| 66794 | androgen and estrogen metabolism | 50 | 8 of 16 | ||
| 66794 | degradation of hexoses | 50 | 9 of 18 | ||
| 66794 | kanosamine biosynthesis II | 50 | 1 of 2 | ||
| 66794 | glycine metabolism | 50 | 5 of 10 | ||
| 66794 | ribulose monophosphate pathway | 50 | 1 of 2 | ||
| 66794 | coenzyme M biosynthesis | 50 | 5 of 10 | ||
| 66794 | ascorbate metabolism | 50 | 11 of 22 | ||
| 66794 | pantothenate biosynthesis | 50 | 3 of 6 | ||
| 66794 | degradation of sugar acids | 48 | 12 of 25 | ||
| 66794 | bile acid biosynthesis, neutral pathway | 47.06 | 8 of 17 | ||
| 66794 | sulfate reduction | 46.15 | 6 of 13 | ||
| 66794 | phenylpropanoid biosynthesis | 46.15 | 6 of 13 | ||
| 66794 | lipid A biosynthesis | 44.44 | 4 of 9 | ||
| 66794 | nitrate assimilation | 44.44 | 4 of 9 | ||
| 66794 | polyamine pathway | 43.48 | 10 of 23 | ||
| 66794 | D-cycloserine biosynthesis | 40 | 2 of 5 | ||
| 66794 | gallate degradation | 40 | 2 of 5 | ||
| 66794 | bacilysin biosynthesis | 40 | 2 of 5 | ||
| 66794 | carnitine metabolism | 37.5 | 3 of 8 | ||
| 66794 | vitamin B6 metabolism | 36.36 | 4 of 11 | ||
| 66794 | arachidonic acid metabolism | 33.33 | 6 of 18 | ||
| 66794 | enterobactin biosynthesis | 33.33 | 1 of 3 | ||
| 66794 | sphingosine metabolism | 33.33 | 2 of 6 | ||
| 66794 | cyanate degradation | 33.33 | 1 of 3 | ||
| 66794 | IAA biosynthesis | 33.33 | 1 of 3 | ||
| 66794 | benzoyl-CoA degradation | 28.57 | 2 of 7 | ||
| 66794 | chlorophyll metabolism | 27.78 | 5 of 18 | ||
| 66794 | dolichyl-diphosphooligosaccharide biosynthesis | 27.27 | 3 of 11 | ||
| 66794 | vitamin E metabolism | 25 | 1 of 4 | ||
| 66794 | alginate biosynthesis | 25 | 1 of 4 | ||
| 66794 | lactate fermentation | 25 | 1 of 4 | ||
| 66794 | catecholamine biosynthesis | 25 | 1 of 4 | ||
| 66794 | methanogenesis from CO2 | 25 | 3 of 12 | ||
| 66794 | allantoin degradation | 22.22 | 2 of 9 |
| @ref | Description | Assembly level | INSDC accession | BV-BRC accession | IMG accession | NCBI tax ID | Score | |
|---|---|---|---|---|---|---|---|---|
| 66792 | Micromonospora olivasterospora DSM 43868 | complete | 1880 | 99.69 | ||||
| 66792 | ASM783026v1 assembly for Micromonospora olivasterospora DSM 43868 | contig | 1880 | 68.32 | ||||
| 124043 | ASM3953349v1 assembly for Micromonospora olivasterospora JCM 7348 | scaffold | 1880 | 0 |
| @ref | Trait | Model | Prediction | Confidence in % | In training data |
|---|---|---|---|---|---|
| 125439 | oxygen_tolerance | BacteriaNetⓘ | obligate aerobe | 98.82 | no |
| 125439 | gram_stain | BacteriaNetⓘ | positive | 99.68 | no |
| 125439 | motility | BacteriaNetⓘ | no | 96.33 | no |
| 125439 | spore_formation | BacteriaNetⓘ | yes | 95.48 | no |
| @ref | Trait | Model | Prediction | Confidence in % | In training data |
|---|---|---|---|---|---|
| 125438 | gram-positive | gram-positiveⓘ | yes | 90.56 | no |
| 125438 | anaerobic | anaerobicⓘ | no | 92.08 | no |
| 125438 | spore-forming | spore-formingⓘ | yes | 89.28 | no |
| 125438 | aerobic | aerobicⓘ | yes | 88.26 | no |
| 125438 | thermophilic | thermophileⓘ | no | 92.98 | yes |
| 125438 | flagellated | motile2+ⓘ | no | 87.50 | no |
| Topic | Title | Authors | Journal | DOI | Year | |
|---|---|---|---|---|---|---|
| Response Surface D-Optimal Design for Optimizing Fortimicins Production by Micromonospora olivasterospora and New Synergistic Fortimicin-A-Antibiotic Combinations. | Selim HMRM, Gomaa FAM, Alshahrani MY, Aboshanab KM. | Curr Microbiol | 10.1007/s00284-024-04049-1 | 2025 | ||
| A novel, highly efficient gene-cloning system for Micromonospora strains. | Hasegawa M, Dairi T, Ohta T, Hashimoto E. | J Bacteriol | 10.1128/jb.173.21.7004-7011.1991 | 1991 | ||
| In Vivo Characterization of Phosphotransferase-Encoding Genes istP and forP as Interchangeable Launchers of the C3',4'-Dideoxygenation Biosynthetic Pathway of 1,4-Diaminocyclitol Antibiotics. | Huong N, Lee NJ, Hwang HH, Son HB, Kim HJ, Seo EG, Hoang N, Park JW. | J Microbiol Biotechnol | 10.4014/jmb.1809.09021 | 2019 | ||
| Metabolism | Characterisation of 6-DMATSMo from Micromonospora olivasterospora leading to identification of the divergence in enantioselectivity, regioselectivity and multiple prenylation of tryptophan prenyltransferases. | Winkelblech J, Xie X, Li SM. | Org Biomol Chem | 10.1039/c6ob01803c | 2016 | |
| Improving activity of GenB3 and GenB4 in gentamicin dideoxygenation biosynthesis by semi-rational engineering. | Zhai H, Yang L, Ye Q, Kong Z, Pei J, Ji Y, Liu B, Chen X, Tian T, Ni X, Xia H, Zhang S. | Microb Cell Fact | 10.1186/s12934-025-02678-0 | 2025 | ||
| Odor Characteristics of Novel Non-Canonical Terpenes. | Sommer S, Lang LM, Drummond L, Buchhaupt M, Fraatz MA, Zorn H. | Molecules | 10.3390/molecules27123827 | 2022 | ||
| Metabolism | Heterologous expression of 2-methylisoborneol / 2 methylenebornane biosynthesis genes in Escherichia coli yields novel C11-terpenes. | Kschowak MJ, Wortmann H, Dickschat JS, Schrader J, Buchhaupt M. | PLoS One | 10.1371/journal.pone.0196082 | 2018 | |
| Phylogeny | Intrageneric relationships among Micromonospora species deduced from gyrB-based phylogeny and DNA relatedness. | Kasai H, Tamura T, Harayama S. | Int J Syst Evol Microbiol | 10.1099/00207713-50-1-127 | 2000 | |
| Metabolism | Identification and functional analysis of genes controlling biosynthesis of 2-methylisoborneol. | Komatsu M, Tsuda M, Omura S, Oikawa H, Ikeda H. | Proc Natl Acad Sci U S A | 10.1073/pnas.0802312105 | 2008 | |
| Analysis of the self-defense gene (fmrO) of a fortimicin A (astromicin) producer, Micromonospora olivasterospora: comparison with other aminoglycoside-resistance-encoding genes. | Ohta T, Hasegawa M. | Gene | 10.1016/0378-1119(93)90617-c | 1993 | ||
| Self cloning in Micromonospora olivasterospora of fms genes for fortimicin A (astromicin) biosynthesis. | Dairi T, Ohta T, Hashimoto E, Hasegawa M. | Mol Gen Genet | 10.1007/bf00280005 | 1992 | ||
| Organization and nature of fortimicin A (astromicin) biosynthetic genes studied using a cosmid library of Micromonospora olivasterospora DNA. | Dairi T, Ohta T, Hashimoto E, Hasegawa M. | Mol Gen Genet | 10.1007/bf00279641 | 1992 | ||
| Phylogeny | K-259-2, a new inhibitor of Ca2+ and calmodulin-dependent cyclic nucleotide phosphodiesterase from Micromonospora olivasterospora. | Matsuda Y, Asano K, Kawamoto I, Kase H. | J Antibiot (Tokyo) | 10.7164/antibiotics.40.1092 | 1987 | |
| Metabolism | Biosynthetic similarity between Streptomyces tenjimariensis and Micromonospora olivasterospora which produce fortimicin-group antibiotics. | Hotta K, Morioka M, Okami Y. | J Antibiot (Tokyo) | 10.7164/antibiotics.42.745 | 1989 | |
| Enzymology | N-formimidoyl fortimicin A synthase, a unique oxidase involved in fortimicin A biosynthesis: purification, characterization and gene cloning. | Dairi T, Yamaguchi K, Hasegawa M. | Mol Gen Genet | 10.1007/bf00279642 | 1992 | |
| Enzymology | A novel, highly efficient gene-cloning system in Micromonospora applied to the genetic analysis of fortimicin biosynthesis. | Hasegawa M. | Gene | 10.1016/0378-1119(92)90544-y | 1992 | |
| Metabolism | Biosynthesis of astromicin and related antibiotics. II. Biosynthetic studies with blocked mutants of Micromonospora olivasterospora. | Odakura Y, Kase H, Itoh S, Satoh S, Takasawa S, Takahashi K, Shirahata K, Nakayama K. | J Antibiot (Tokyo) | 10.7164/antibiotics.37.1670 | 1984 | |
| Metabolism | Common biosynthetic feature of fortimicin-group antibiotics. | Dairi T, Hasegawa M. | J Antibiot (Tokyo) | 10.7164/antibiotics.42.934 | 1989 | |
| Phylogeny | Genome-based classification of micromonosporae with a focus on their biotechnological and ecological potential. | Carro L, Nouioui I, Sangal V, Meier-Kolthoff JP, Trujillo ME, Montero-Calasanz MDC, Sahin N, Smith DL, Kim KE, Peluso P, Deshpande S, Woyke T, Shapiro N, Kyrpides NC, Klenk HP, Goker M, Goodfellow M. | Sci Rep | 10.1038/s41598-017-17392-0 | 2018 | |
| Biosynthesis of astromicin and related antibiotics. I. Biosynthetic studies by bioconversion experiments. | Itoh S, Odakura Y, Kase H, Satoh S, Takahashi K, Iida T, Shirahata K, Nakayama K. | J Antibiot (Tokyo) | 10.7164/antibiotics.37.1664 | 1984 | ||
| Metabolism | Exploration and mining of the bacterial terpenome. | Cane DE, Ikeda H. | Acc Chem Res | 10.1021/ar200198d | 2012 | |
| Metabolism | Microbisporicin gene cluster reveals unusual features of lantibiotic biosynthesis in actinomycetes. | Foulston LC, Bibb MJ. | Proc Natl Acad Sci U S A | 10.1073/pnas.1008285107 | 2010 | |
| Enzymology | Plasmid-mediated 16S rRNA methylase in Serratia marcescens conferring high-level resistance to aminoglycosides. | Doi Y, Yokoyama K, Yamane K, Wachino J, Shibata N, Yagi T, Shibayama K, Kato H, Arakawa Y. | Antimicrob Agents Chemother | 10.1128/aac.48.2.491-496.2004 | 2004 | |
| Pathogenicity | Plasmid-mediated high-level resistance to aminoglycosides in Enterobacteriaceae due to 16S rRNA methylation. | Galimand M, Courvalin P, Lambert T. | Antimicrob Agents Chemother | 10.1128/aac.47.8.2565-2571.2003 | 2003 | |
| Phylogeny | Widespread and persistent populations of a major new marine actinomycete taxon in ocean sediments. | Mincer TJ, Jensen PR, Kauffman CA, Fenical W. | Appl Environ Microbiol | 10.1128/aem.68.10.5005-5011.2002 | 2002 | |
| Metabolism | Isolation and characterization of novel marine-derived actinomycete taxa rich in bioactive metabolites. | Magarvey NA, Keller JM, Bernan V, Dworkin M, Sherman DH. | Appl Environ Microbiol | 10.1128/aem.70.12.7520-7529.2004 | 2004 | |
| Metabolism | Characterization of fortimicin aminoglycoside profiles produced from Micromonospora olivasterospora DSM 43868 by high-performance liquid chromatography-electrospray ionization-ion trap-mass spectrometry. | Huong NL, Hoang NH, Hong SY, Sohng JK, Yoon YJ, Park JW | Anal Bioanal Chem | 10.1007/s00216-015-9281-2 | 2016 | |
| Pathogenicity | Characterization of two different types of resistance genes among producers of fortimicin-group antibiotics. | Ohta T, Dairi T, Hasegawa M | J Gen Microbiol | 10.1099/00221287-139-3-591 | 1993 | |
| Enzymology | Cloning and analysis of a gene (sms13) encoding sannamycin B-glycyltransferase from Streptomyces sannanensis and its distribution among actinomycetes. | Ohta T, Hashimoto E, Hasegawa M | J Antibiot (Tokyo) | 10.7164/antibiotics.45.1167 | 1992 | |
| Phylogeny | Micromonospora yasonensis sp. nov., isolated from a Black Sea sediment. | Veyisoglu A, Carro L, Guven K, Cetin D, Sproer C, Schumann P, Klenk HP, Goodfellow M, Sahin N. | Antonie Van Leeuwenhoek | 10.1007/s10482-016-0701-x | 2016 | |
| Phylogeny | Micromonospora craniellae sp. nov., isolated from a marine sponge, and reclassification of Jishengella endophytica as Micromonospora endophytica comb. nov. | Li L, Zhu HR, Xu QH, Lin HW, Lu YH | Int J Syst Evol Microbiol | 10.1099/ijsem.0.003209 | 2019 | |
| Phylogeny | Micromonospora avicenniae sp. nov., isolated from a root of Avicennia marina. | Li L, Mao YJ, Xie QY, Deng Z, Hong K | Antonie Van Leeuwenhoek | 10.1007/s10482-013-9888-2 | 2013 | |
| Phylogeny | Micromonospora equina sp. nov., isolated from soil from a racecourse. | Everest GJ, Meyers PR | Int J Syst Evol Microbiol | 10.1099/ijs.0.042929-0 | 2012 | |
| Phylogeny | Description of Verrucosispora qiuiae sp. nov., isolated from mangrove swamp sediment, and emended description of the genus Verrucosispora. | Xi L, Zhang L, Ruan J, Huang Y | Int J Syst Evol Microbiol | 10.1099/ijs.0.033787-0 | 2011 | |
| Phylogeny | Micromonospora rhizosphaerae sp. nov., isolated from mangrove rhizosphere soil. | Wang C, Xu XX, Qu Z, Wang HL, Lin HP, Xie QY, Ruan JS, Hong K | Int J Syst Evol Microbiol | 10.1099/ijs.0.020461-0 | 2010 | |
| Phylogeny | Micromonospora pattaloongensis sp. nov., isolated from a Thai mangrove forest. | Thawai C, Tanasupawat S, Kudo T | Int J Syst Evol Microbiol | 10.1099/ijs.0.65410-0 | 2008 |
| #11349 | Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 43868 |
| #19611 | Wink, J.: Compendium of Actinobacteria. HZI-Helmholtz-Centre for Infection Research, Braunschweig . |
| #20215 | Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 ) |
| #20216 | Curators of the JMRC: Jena Microbial Resource Collection (JMRC): |
| #20218 | Verslyppe, B., De Smet, W., De Baets, B., De Vos, P., Dawyndt P.: StrainInfo introduces electronic passports for microorganisms.. Syst Appl Microbiol. 37: 42 - 50 2014 ( DOI 10.1016/j.syapm.2013.11.002 , PubMed 24321274 ) |
| #66792 | Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) . |
| #66794 | Antje Chang, Lisa Jeske, Sandra Ulbrich, Julia Hofmann, Julia Koblitz, Ida Schomburg, Meina Neumann-Schaal, Dieter Jahn, Dietmar Schomburg: BRENDA, the ELIXIR core data resource in 2021: new developments and updates. Nucleic Acids Res. 49: D498 - D508 2020 ( DOI 10.1093/nar/gkaa1025 , PubMed 33211880 ) |
| #67770 | Japan Collection of Microorganism (JCM) ; Curators of the JCM; |
| #68368 | Automatically annotated from API 20E . |
| #68382 | Automatically annotated from API zym . |
| #124043 | Isabel Schober, Julia Koblitz: Data extracted from sequence databases, automatically matched based on designation and taxonomy . |
| #125438 | Julia Koblitz, Lorenz Christian Reimer, Rüdiger Pukall, Jörg Overmann: Predicting bacterial phenotypic traits through improved machine learning using high-quality, curated datasets. 2024 ( DOI 10.1101/2024.08.12.607695 ) |
| #125439 | Philipp Münch, René Mreches, Martin Binder, Hüseyin Anil Gündüz, Xiao-Yin To, Alice McHardy: deepG: Deep Learning for Genome Sequence Data. R package version 0.3.1 . |
| #126262 | A. Lissin, I. Schober, J. F. Witte, H. Lüken, A. Podstawka, J. Koblitz, B. Bunk, P. Dawyndt, P. Vandamme, P. de Vos, J. Overmann, L. C. Reimer: StrainInfo—the central database for linked microbial strain identifiers. ( DOI 10.1093/database/baaf059 ) |
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