Peribacillus simplex (DSM 1321, ATCC 49097, NRS 960)

Name: Peribacillus simplex (DSM 1321, ATCC 49097, NRS 960)
Creator: BacDive
License: http://creativecommons.org/licenses/by/4.0/

BacDive ID 790

Type strain

Strain Designation NRS-960

Culture col. no. DSM 1321 ATCC 49097 NRS 960 VTT E-97781 NRRL NRS-960 11 more

NCBI tax ID(s) 1478

Special Collections DSMZ CCUG JCM KCTC CIP Literature strains

History <- R.E. Gordon, NRS 960 (Bacillus megaterium) <- J.R. Porter <- O.F. Edwards <- H.J. Cohn DSM 1321 <-- R. E. Gordon NRS 960 <-- J. R. Porter <-- O. F. Edwards <-- H. J. Cohn. CIP <- 2001, CCUG <- 1991, L.K. Nakamura, NRRL, Peoria, USA: strain NRS-960

Links

Peribacillus simplex NRS-960 is an obligate aerobe, mesophilic, Gram-positive prokaryote that was isolated from Soil.

Gram-positive rod-shaped obligate aerobe mesophilic genome sequence 16S sequence

Name and taxonomic classification

SI-ID 1178

LMG 11160,ATCC 49097,DSM 1321,CCUG 28889,NRRL NRS-960,IFO 15720,CIP 106934,KCTC 3450,CCM 7148,NBRC 15720,BCRC 15909,CCRC 15909,JCM 12307,CGMCC 1.3471,VTT E-97781

@ref 20215

Last LPSN update 2026-02-09 11:17:57

Domain Bacteria

Phylum Bacillota

Class Bacilli

Order Caryophanales

Family Bacillaceae

Genus Peribacillus

Species Peribacillus simplex

Full scientific name Peribacillus simplex (Priest et al. 1989 ex Meyer and Gottheil 1901) Patel and Gupta 2020

Synonyms (1)

Bacillus simplex

BacDive ID	Other strains from **Peribacillus simplex** (44)	Type strain
787	P. simplex DSM 1317, NRS 607
788	P. simplex DSM 1318, NRS 610
789	P. simplex DSM 1319, NRS 623
791	P. simplex DSM 1322, NCTC 2597, NRS 961
792	P. simplex DSM 1323, NRS 986
793	P. simplex DSM 1509, NRS 822
794	P. simplex DSM 1510, NRS 824
795	P. simplex DSM 1511, NRS 835
796	P. simplex C18, DSM 1512, NRS 836
797	P. simplex DSM 1513, NRS 837
798	P. simplex DSM 1514, NRS 907
799	P. simplex DSM 1515, NRS 962
800	P. simplex DSM 1516, NRS 1335
801	P. simplex Gibson 21, DSM 1527, NCIB 4821
802	P. simplex Blau, DSM 1640, NRS 608
803	P. simplex DSM 1641, NRS 828
804	P. simplex DSM 1642, NRS 829
805	P. simplex 41, DSM 2897, ATCC 13368
806	P. simplex ES 21, DSM 13997
807	P. simplex ES2-W11a2, DSM 30649
808	P. simplex ES2-W8c1, DSM 30646
809	P. simplex W19/1, DSM 30788
130863	P. simplex P-6, DSM 100650
22914	P. simplex P2/14_1, DSM 30922
130171	P. simplex G1, DSM 31018
130172	P. simplex b9_1, DSM 31006
130173	P. simplex b9_2, DSM 31007
130174	P. simplex b9_3, DSM 31017
130175	P. simplex b9_7, DSM 31004
130176	P. simplex WLC1_1, DSM 31012
130177	P. simplex T2_51, DSM 31000
131634	P. simplex D27_1, DSM 103750
157595	P. simplex Turin241018_C2, DSM 108813
157596	P. simplex K25-2, DSM 109491
158841	P. simplex K26-6, DSM 109524
158842	P. simplex K26-8, DSM 109525
163610	P. simplex JCM 28805
163611	P. simplex JCM 28806
163612	P. simplex JCM 28807
163619	P. simplex JCM 28813
163653	P. simplex JCM 28848
163662	P. simplex JCM 28856
163672	P. simplex JCM 28866
169174	P. simplex M19, DSM 103777

Morphology

Cell morphology

@ref	Gram stain	Cell shape	Motility
122621	positive	rod-shaped

Colony morphology

@ref	Colony color
22903	white
122621

Culture and growth conditions

Culture medium

@ref	Name	Medium link	Composition
22903	MacConkey agar
519	NUTRIENT AGAR (DSMZ Medium 1)	Medium recipe at MediaDive	Name: NUTRIENT AGAR (DSMZ Medium 1) Composition: Agar 15.0 g/l Peptone 5.0 g/l Meat extract 3.0 g/l Distilled water
34193	MEDIUM 29- Brain heart agar		Distilled water make up to (1000.000 ml);Brain heart infusion agar (52.000 g)
122621	CIP Medium 29	Medium recipe at CIP

Culture temp

@ref	Growth	Type	Temperature (°C)	Range
519	positive	growth	30	mesophilic
34193	positive	growth	30	mesophilic
67770	positive	growth	30	mesophilic
122621	positive	growth	10-37
122621	negative	growth	45
122621	negative	growth	55

Culture pH

@ref	Ability	Type	PH
122621	positive	growth	6

Physiology and metabolism

Oxygen tolerance

122621

Oxygen toleranceobligate aerobe

Spore formation

@ref	Spore formation	Confidence
125439		96.1
125438		92.426

Halophily

@ref	Salt	Growth	Tested relation	Concentration
122621	NaCl	positive	growth	0-2 %
122621	NaCl		growth	4 %
122621	NaCl		growth	6 %
122621	NaCl		growth	8 %
122621	NaCl		growth	10 %

Metabolite utilization

@ref	Chebi-ID	Metabolite	Utilization activity	Kind of utilization tested
68371	27613 ChEBI	amygdalin	-	builds acid from	from API 50CH acid
68371	18305 ChEBI	arbutin	-	builds acid from	from API 50CH acid
22904		casein	+	hydrolysis
68371	17057 ChEBI	cellobiose	-	builds acid from	from API 50CH acid
122621	16947 ChEBI	citrate	-	carbon source
68371	17108 ChEBI	D-arabinose	-	builds acid from	from API 50CH acid
68371	18333 ChEBI	D-arabitol	-	builds acid from	from API 50CH acid
68371	15824 ChEBI	D-fructose	+	builds acid from	from API 50CH acid
68371	28847 ChEBI	D-fucose	+	builds acid from	from API 50CH acid
68371	12936 ChEBI	D-galactose	-	builds acid from	from API 50CH acid
22904	17634 ChEBI	D-glucose	+	builds acid from
68371	17634 ChEBI	D-glucose	-	builds acid from	from API 50CH acid
68371	62318 ChEBI	D-lyxose	-	builds acid from	from API 50CH acid
22904	16899 ChEBI	D-mannitol	+	builds acid from
68371	16899 ChEBI	D-mannitol	-	builds acid from	from API 50CH acid
22904	16024 ChEBI	D-mannose	-	builds acid from
68371	16024 ChEBI	D-mannose	-	builds acid from	from API 50CH acid
22904	16988 ChEBI	D-ribose	+	builds acid from
68371	16988 ChEBI	D-ribose	-	builds acid from	from API 50CH acid
68371	17924 ChEBI	D-sorbitol	+	builds acid from	from API 50CH acid
68371	16443 ChEBI	D-tagatose	-	builds acid from	from API 50CH acid
68371	65327 ChEBI	D-xylose	-	builds acid from	from API 50CH acid
68371	17113 ChEBI	erythritol	-	builds acid from	from API 50CH acid
122621	4853 ChEBI	esculin	-	hydrolysis
68371	4853 ChEBI	esculin	-	builds acid from	from API 50CH acid
22903	28757 ChEBI	fructose	-	builds acid from
68371	16813 ChEBI	galactitol	-	builds acid from	from API 50CH acid
22903	28260 ChEBI	galactose	-	builds acid from
22903	5291 ChEBI	gelatin	-	hydrolysis
22904	5291 ChEBI	gelatin	+	hydrolysis
68371	28066 ChEBI	gentiobiose	-	builds acid from	from API 50CH acid
68371	24265 ChEBI	gluconate	+	builds acid from	from API 50CH acid
22903	17234 ChEBI	glucose	+	builds acid from
22903	17754 ChEBI	glycerol	+	builds acid from
68371	17754 ChEBI	glycerol	-	builds acid from	from API 50CH acid
68371	28087 ChEBI	glycogen	-	builds acid from	from API 50CH acid
122621	606565 ChEBI	hippurate	+	hydrolysis
68371	15443 ChEBI	inulin	-	builds acid from	from API 50CH acid
22904	30849 ChEBI	L-arabinose	-	builds acid from
68371	30849 ChEBI	L-arabinose	-	builds acid from	from API 50CH acid
68371	18403 ChEBI	L-arabitol	+	builds acid from	from API 50CH acid
68371	18287 ChEBI	L-fucose	+	builds acid from	from API 50CH acid
68371	62345 ChEBI	L-rhamnose	-	builds acid from	from API 50CH acid
68371	17266 ChEBI	L-sorbose	-	builds acid from	from API 50CH acid
68371	65328 ChEBI	L-xylose	-	builds acid from	from API 50CH acid
22903	17716 ChEBI	lactose	-	builds acid from
22904	17716 ChEBI	lactose	-	builds acid from
68371	17716 ChEBI	lactose	-	builds acid from	from API 50CH acid
22903	17306 ChEBI	maltose	+	builds acid from
68371	17306 ChEBI	maltose	-	builds acid from	from API 50CH acid
22903	29864 ChEBI	mannitol	+	builds acid from
22903	37684 ChEBI	mannose	+	builds acid from
68371	6731 ChEBI	melezitose	-	builds acid from	from API 50CH acid
68371	28053 ChEBI	melibiose	-	builds acid from	from API 50CH acid
68371	320061 ChEBI	methyl alpha-D-glucopyranoside	-	builds acid from	from API 50CH acid
68371	43943 ChEBI	methyl alpha-D-mannoside	-	builds acid from	from API 50CH acid
68371	74863 ChEBI	methyl beta-D-xylopyranoside	-	builds acid from	from API 50CH acid
68371	17268 ChEBI	myo-inositol	-	builds acid from	from API 50CH acid
68371	59640 ChEBI	N-acetylglucosamine	-	builds acid from	from API 50CH acid
22903	17632 ChEBI	nitrate	+	reduction
122621	17632 ChEBI	nitrate	+	reduction
122621	17632 ChEBI	nitrate	-	respiration
122621	16301 ChEBI	nitrite	-	reduction
68371		Potassium 2-ketogluconate	-	builds acid from	from API 50CH acid
68371		Potassium 5-ketogluconate	-	builds acid from	from API 50CH acid
22903	16634 ChEBI	raffinose	-	builds acid from
68371	16634 ChEBI	raffinose	-	builds acid from	from API 50CH acid
68371	15963 ChEBI	ribitol	-	builds acid from	from API 50CH acid
68371	17814 ChEBI	salicin	-	builds acid from	from API 50CH acid
22903	30911 ChEBI	sorbitol	+	builds acid from
22904	28017 ChEBI	starch	+	hydrolysis
68371	28017 ChEBI	starch	-	builds acid from	from API 50CH acid
22903	17992 ChEBI	sucrose	-	builds acid from
68371	17992 ChEBI	sucrose	-	builds acid from	from API 50CH acid
22903	27082 ChEBI	trehalose	+	builds acid from
68371	27082 ChEBI	trehalose	-	builds acid from	from API 50CH acid
68371	32528 ChEBI	turanose	+	builds acid from	from API 50CH acid
68371	17151 ChEBI	xylitol	-	builds acid from	from API 50CH acid
22903	18222 ChEBI	xylose	+	builds acid from

Metabolite production

@ref	Chebi-ID	Metabolite	Production
122621	35581 ChEBI	indole

Metabolite tests

@ref	Chebi-ID	Metabolite	Voges-proskauer-test	Methylred-test
122621	15688 ChEBI	acetoin	-
122621	17234 ChEBI	glucose		-

Enzymes

@ref	Value	Activity	Ec
22903	acid phosphatase	+	3.1.3.2
68382	acid phosphatase	-	3.1.3.2	from API zym
122621	alcohol dehydrogenase	-	1.1.1.1
22903	alkaline phosphatase	+	3.1.3.1
68382	alkaline phosphatase	-	3.1.3.1	from API zym
22903	alpha-chymotrypsin	+	3.4.21.1
68382	alpha-chymotrypsin	-	3.4.21.1	from API zym
68382	alpha-fucosidase	-	3.2.1.51	from API zym
68382	alpha-galactosidase	-	3.2.1.22	from API zym
22903	alpha-glucosidase	+	3.2.1.20
68382	alpha-glucosidase	-	3.2.1.20	from API zym
68382	alpha-mannosidase	-	3.2.1.24	from API zym
122621	amylase	-
22903	beta-galactosidase	-	3.2.1.23
122621	beta-galactosidase	-	3.2.1.23
68382	beta-galactosidase	-	3.2.1.23	from API zym
22903	beta-glucosidase	-	3.2.1.21
68382	beta-glucosidase	-	3.2.1.21	from API zym
68382	beta-glucuronidase	-	3.2.1.31	from API zym
122621	caseinase	-	3.4.21.50
122621	catalase	+	1.11.1.6
22903	cystine arylamidase	-	3.4.11.3
68382	cystine arylamidase	-	3.4.11.3	from API zym
122621	DNase	-
68382	esterase (C 4)	+		from API zym
68382	esterase lipase (C 8)	+		from API zym
122621	gamma-glutamyltransferase	+	2.3.2.2
22903	gelatinase	-
22904	gelatinase	+
122621	gelatinase	+/-
122621	lecithinase	-
68382	leucine arylamidase	-	3.4.11.1	from API zym
122621	lipase	-
68382	lipase (C 14)	-		from API zym
122621	lysine decarboxylase	-	4.1.1.18
22903	N-acetyl-beta-glucosaminidase	-	3.2.1.52
68382	N-acetyl-beta-glucosaminidase	-	3.2.1.52	from API zym
68382	naphthol-AS-BI-phosphohydrolase	-		from API zym
122621	ornithine decarboxylase	-	4.1.1.17
122621	oxidase	+
22903	trypsin	-	3.4.21.4
68382	trypsin	-	3.4.21.4	from API zym
122621	tween esterase	-
122621	urease	-	3.5.1.5
22903	valine arylamidase	-
68382	valine arylamidase	-		from API zym

API zym

@ref	Control	Alkaline phosphatase	Esterase (C 4)	2-naphtyl caprylateEsterase Lipase (C 8)	Lipase (C 14)	L-leucyl-2-naphthylamideLeucine arylamidase	L-valyl-2-naphthylamideValine arylamidase	L-cystyl-2-naphthylamideCystine arylamidase	Trypsin	alpha- Chymotrypsin	Acid phosphatase	Naphthol-AS-BI-phosphateNaphthol-AS-BI-phosphohydrolase	alpha- Galactosidase	beta- Galactosidase	beta- Glucuronidase	alpha- Glucosidase	beta- Glucosidase	N-acetyl-beta- glucosaminidase	alpha- Mannosidase	alpha- Fucosidase
122621	-	-	+	+	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-

API 50CHac

@ref	ControlQ	GLY	ERY	DARA	LARA	RIB	DXYL	LXYL	ADO	MDX	GAL	GLU	FRU	MNE	SBE	RHA	DUL	INO	MAN	SOR	MDM	MDG	NAG	AMY	ARB	ESC	SAL	CEL	MAL	LAC	MEL	SAC	TRE	INU	MLZ	RAF	AMD	GLYG	XLT	GEN	TUR	LYX	TAG	DFUC	LFUC	DARL	LARL	GNT	2KG	5KG
122621	not determinedn.d.	-	-	-	-	-	-	-	-	-	-	-	+	-	-	-	-	-	-	+	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	+	-	-	+	+	-	+	+	-	-

API biotype100

@ref	ControlQ	D-glucose as carbon sourceGLU	D-fructose as carbon sourceFRU	D-galactose as carbon sourceGAL	D-trehalose as carbon sourceTRE	D-mannose as carbon sourceMNE	L-sorbose as carbon sourceSBE	D-melibiose as carbon sourceMEL	sucrose as carbon sourceSAC	D-raffinose as carbon sourceRAF	maltotriose as carbon sourceMTE	maltose as carbon sourceMAL	lactose as carbon sourceLAC	lactulose as carbon sourceLTE	1-O-methyl-beta-galactopyranoside as carbon sourceMbGa	1-O-methyl-alpha-galactopyranoside as carbon sourceMaGa	D-cellobiose as carbon sourceCEL	gentiobiose as carbon sourceGEN	1-O-methyl-beta-D-glucopyranoside as carbon sourceMbGu	esculin as carbon sourceESC	D-ribose as carbon sourceRIB	L-arabinose as carbon sourceARA	D-xylose as carbon sourceXYL	palatinose as carbon sourcePLE	L-rhamnose as carbon sourceRHA	L-fucose as carbon sourceFUC	D-melezitose as carbon sourceMLZ	D-arabitol as carbon sourceDARL	L-arabitol as carbon sourceLARL	xylitol as carbon sourceXLT	dulcitol as carbon sourceDUL	D-tagatose as carbon sourceTAG	glycerol as carbon sourceGLY	myo-inositol as carbon sourceINO	D-mannitol as carbon sourceMAN	maltitol as carbon sourceMTL	D-turanose as carbon sourceTUR	D-sorbitol as carbon sourceSOR	adonitol as carbon sourceADO	hydroxyquinoline-beta-glucuronide as carbon sourceHBG	D-lyxose as carbon sourceLYX	i-erythritol as carbon sourceERY	1-O-methyl-alpha-D-glucoside as carbon sourceMDG	3-O-methyl-D-glucose as carbon source3MDG	D-saccharate as carbon sourceSAT	mucate as carbon sourceMUC	L-tartrate as carbon sourceLTAT	D-tartrate as carbon sourceDTAT	meso-tartrate as carbon sourceMTAT	D-malate as carbon sourceDMLT	L-malate as carbon sourceLMLT	cis-aconitate as carbon sourceCATE	trans-aconitate as carbon sourceTATE	tricarballylate as carbon sourceTTE	citrate as carbon sourceCIT	D-glucuronate as carbon sourceGRT	D-galacturonate as carbon sourceGAT	2-ketogluconate as carbon source2KG	5-ketogluconate as carbon source5KG	tryptophan as carbon sourceTRY	N-acetyl-D-glucosamine as carbon sourceNAG	D-gluconate as carbon sourceGNT	phenylacetate as carbon sourcePAC	protocatechuate as carbon sourcePAT	4-hydroxybenzoate as carbon sourcepOBE	quinate as carbon sourceQAT	gentisate as carbon sourceGTE	3-hydroxybenzoate as carbon sourcemOBE	benzoate as carbon sourceBAT	3-phenylpropionate as carbon sourcePPAT	m-coumarate as carbon sourceCMT	trigonelline as carbon sourceTGE	betaine as carbon sourceBET	putrescine as carbon sourcePCE	4-aminobutyrate as carbon sourceABT	histamine as carbon sourceHIN	DL-lactate as carbon sourceLAT	caprate as carbon sourceCAP	caprylate as carbon sourceCYT	L-histidine as carbon sourceHIS	succinate as carbon sourceSUC	fumarate as carbon sourceFUM	glutarate as carbon sourceGRE	DL-glycerate as carbon sourceGYT	5-aminovalerate as carbon sourceAVT	ethanolamine as carbon sourceETN	tryptamine as carbon sourceTTN	D-glucosamine as carbon sourceGLN	itaconate as carbon sourceITA	3-hydroxybutyrate as carbon source3OBU	L-aspartate as carbon sourceAPT	L-glutamate as carbon sourceGTT	L-proline as carbon sourcePRO	D-alanine as carbon sourceDALA	L-alanine as carbon sourceLALA	L-serine as carbon sourceSER	malonate as carbon sourceMNT	propionate as carbon sourcePROP	L-tyrosine as carbon sourceTYR	2-ketoglutarate as carbon source2KT
122621	not determinedn.d.	+	+	-	+	-	-	-	-	-	+	+	-	-	-	-	+	-	-	+	+	-	+	-	+	-	-	-	-	-	-	-	+	+	+	-	-	+	-	-	-	-	-	-	+	+	+	-	-	+	+	-	+	-	+	+	-	+	-	-	+	+	+	+	-	+	-	+	+	+	+	-	-	+	+	-	+	-	+	-	+	+	+	-	+	+	-	+	-	+	+	+	+	+	+	+	-	-	+	-

Isolation, sampling and environmental information

Isolation

@ref	Sample type
67770	Soil
122621	Environment, Soil

Taxonmaps

69479

Global distribution of 16S sequence AJ439078 (>99% sequence identity) for Peribacillus from Microbeatlas

Aquatic Samples	1051
Soil Samples	6241
Animal Samples	2464
Plant Samples	880
Total Samples	10636

Interaction and safety

Risk assessment

@ref	Biosafety level	Biosafety level comment
519	1	Risk group (German classification) According to TRBA 466
122621	1	Risk group (French classification) According to TRBA 466

Sequence information

Genome sequences

@ref	Description	Assembly level	INSDC accession	BV-BRC accession	IMG accession	NCBI tax ID	Score
66792	ASM224364v1 assembly for Peribacillus simplex NBRC 15720 = DSM 1321	complete	GCA_002243645	1349754.5	2823415468	1349754	98.39
124043	ASM5046846v1 assembly for Peribacillus simplex NRS-960	contig	GCA_050468465			1478	61.78
67770	ASM159178v1 assembly for Peribacillus simplex NBRC 15720 = DSM 1321	contig	GCA_001591785	1349754.4	2731957667	1349754	57.46
66792	ASM767957v1 assembly for Peribacillus simplex NBRC 15720 = DSM 1321 DE0084	scaffold	GCA_007679575	1349754.9	8002441012	1349754	44.25

16S sequences

@ref	Description	Accession	Length	NCBI tax ID
20218	Bacillus simplex 16S rRNA gene, strain DSM 1321T	AJ439078	1522	1478
20218	Bacillus simplex DNA for 16S ribosomal RNA, partial sequence	D78478	1433	1478
20218	B.simplex 16S ribosomal RNA	X60638	1429	1478
20218	Bacillus simplex partial 16S rRNA gene, type strain LMG 11160T	AJ628743	1503	1478
20218	Bacillus simplex gene for 16S rRNA, partial sequence, strain: NBRC 15720	AB363738	1476	1478
124043	Peribacillus simplex NBRC 15720 = DSM 1321 strain ZSTM12231 16S ribosomal RNA gene, partial sequence.	ON629931	1017	1349754
124043	Peribacillus simplex strain NBRC 15720 = DSM 1321 16S ribosomal RNA gene, partial sequence.	OR660296	1067	1478
124043	Peribacillus simplex NBRC 15720 = DSM 1321 16S ribosomal RNA gene, partial sequence.	PP757990	1431	1349754

GC content

@ref	GC-content (mol%)	Method
519	40.1
67770	40-41	thermal denaturation, midpoint method (Tm)

Genome-based predictions

Predictions

Predictions from Deep Learning for Genome Sequence Data. R package version 0.3.1 based on: Bacillus simplex NBRC 15720 = DSM 1321
PATRIC: 1349754.5

@ref	Trait	Model	Prediction	Confidence in %	In training data
125439	spore_formation	BacteriaNetⓘ	yes	96.10	no
125439	motility	BacteriaNetⓘ	yes	89.10	no
125439	gram_stain	BacteriaNetⓘ	variable	77.10	no
125439	oxygen_tolerance	BacteriaNetⓘ	obligate aerobe	85.50	no

Predictions from bacterial phenotypic traits through improved machine learning using high-quality, curated datasets based on: Peribacillus simplex NBRC 15720 = DSM 1321 DSM 1321
NCBI: GCA_002243645.1

@ref	Trait	Model	Prediction	Confidence in %	In training data
125438	gram-positive	gram-positiveⓘ	yes	81.37	no
125438	anaerobic	anaerobicⓘ	no	93.90	yes
125438	aerobic	aerobicⓘ	yes	76.84	yes
125438	spore-forming	spore-formingⓘ	yes	92.43	no
125438	thermophilic	thermophileⓘ	no	93.01	yes
125438	flagellated	motile2+ⓘ	yes	81.98	no

Literature

Topic	Title	Authors	Journal	DOI	Year
	Maize Endophytic Plant Growth-Promoting Bacteria Peribacillus simplex Can Alleviate Plant Saline and Alkaline Stress.	Li G, Shi M, Wan W, Wang Z, Ji S, Yang F, Jin S, Zhang J.	Int J Mol Sci	10.3390/ijms252010870	2024
Enzymology	Enzyme immobilization on alpha-1,3-glucan: development of flow reactor with fusion protein of alpha-1,3-glucan binding domains and histamine dehydrogenase.	Nagahashi Y, Hasegawa K, Takagi K, Yano S.	J Gen Appl Microbiol	10.2323/jgam.2023.04.002	2024
	Implications of Sample Preparation Methods on the MALDI-TOF MS Identification of Spore-Forming Bacillus Species from Food Samples: A Closer Look at Bacillus licheniformis, Peribacillus simplex, Lysinibacillus fusiformis, Bacillus flexus, and Bacillus marisflavi.	Janiszewska D, Zloch M, Pomastowski P, Szultka-Mlynska M.	ACS Omega	10.1021/acsomega.3c04354	2023
	Links between Soil Bacteriobiomes and Fungistasis toward Fungi Infecting the Colorado Potato Beetle.	Chertkova E, Kabilov MR, Yaroslavtseva O, Polenogova O, Kosman E, Sidorenko D, Alikina T, Noskov Y, Krivopalov A, Glupov VV, Kryukov VY.	Microorganisms	10.3390/microorganisms11040943	2023
	Comparative analysis of microbial contamination in diesel fuels using MALDI-TOF MS.	Ludwiczak A, Zielinski T, Sibinska E, Czeszewska-Rosiak G, Zloch M, Rudnicka J, Tretyn A, Pomastowski P.	Sci Rep	10.1038/s41598-025-87713-1	2025
	Draft Genome Sequence of the Naturally Competent Bacillus simplex Strain WY10.	Keen EC, Bliskovsky VV, Adhya SL, Dantas G.	Genome Announc	10.1128/genomea.01295-17	2017
	The Epiphyte Bacillus sp. G2112 Produces a Large Diversity of Nobilamide Peptides That Promote Biofilm Formation in Pseudomonads and Mycobacterium aurum.	Iloabuchi K, Spiteller D.	Biomolecules	10.3390/biom14101244	2024
	Insights into the diversity and survival strategies of soil bacterial isolates from the Atacama Desert.	Reverdy A, Hathaway D, Jha J, Michaels G, Sullivan J, McAdoo DD, Riquelme C, Chai Y, Godoy-Carter V.	Front Microbiol	10.3389/fmicb.2024.1335989	2024
Enzymology	Epiphytic PGPB Bacillus megaterium AFI1 and Paenibacillus nicotianae AFI2 Improve Wheat Growth and Antioxidant Status under Ni Stress.	Pishchik VN, Filippova PS, Mirskaya GV, Khomyakov YV, Vertebny VE, Dubovitskaya VI, Ostankova YV, Semenov AV, Chakrabarty D, Zuev EV, Chebotar VK.	Plants (Basel)	10.3390/plants10112334	2021
	Reconstruction and identification of DNA sequence landscapes from unzipping experiments at equilibrium.	Barbieri C, Cocco S, Jorg T, Monasson R.	Biophys J	10.1016/j.bpj.2013.11.4496	2014
Phylogeny	Characterization of microbial communities removing nitrogen oxides from flue gas: the BioDeNOx process.	Kumaraswamy R, van Dongen U, Kuenen JG, Abma W, van Loosdrecht MC, Muyzer G.	Appl Environ Microbiol	10.1128/aem.71.10.6345-6352.2005	2005
	The Roman Houses of the Caelian Hill (Rome, Italy): Multitemporal Evaluation of Biodeterioration Patterns.	Isola D, Bartoli F, Morretta S, Caneva G.	Microorganisms	10.3390/microorganisms11071770	2023
Genetics	Whole-genome analysis revealed the growth-promoting mechanism of endophytic bacterial strain Q2H1 in potato plants.	Wang Y, Zhao Q, Sun Z, Li Y, He H, Zhang Y, Yang X, Wang D, Dong B, Zhou H, Zhao M, Zheng H.	Front Microbiol	10.3389/fmicb.2022.1035901	2022
	Prevalence and Correlates of Phenazine Resistance in Culturable Bacteria from a Dryland Wheat Field.	Perry EK, Newman DK.	Appl Environ Microbiol	10.1128/aem.02320-21	2022
	Intimate relationships among actinomycetes and mycolic acid-containing bacteria.	Kato M, Asamizu S, Onaka H.	Sci Rep	10.1038/s41598-022-11406-2	2022
Phylogeny	Diversity of Culturable Bacteria Isolated from Highland Barley Cultivation Soil in Qamdo, Tibet Autonomous Region.	Pan HU, Zhou J, Dawa Z, Dai Y, Zhang Y, Yang H, Wang C, Liu H, Zhou H, Lu X, Tian Y.	Pol J Microbiol	10.33073/pjm-2021-008	2021
	Investigation of Biofouling and Its Effect on the Properties of Basalt Fiber Reinforced Plastic Rebars Exposed to Extremely Cold Climate Conditions.	Kychkin AK, Erofeevskaya LA, Kychkin A, Vasileva ED, Struchkov NF, Lebedev MP.	Polymers (Basel)	10.3390/polym14030369	2022
Phylogeny	A primary assessment of the endophytic bacterial community in a xerophilous moss (Grimmia montana) using molecular method and cultivated isolates.	Liu XL, Liu SL, Liu M, Kong BH, Liu L, Li YH.	Braz J Microbiol	10.1590/s1517-83822014000100022	2014
Metabolism	Divulging diazotrophic bacterial community structure in Kuwait desert ecosystems and their N2-fixation potential.	Suleiman MK, Quoreshi AM, Bhat NR, Manuvel AJ, Sivadasan MT.	PLoS One	10.1371/journal.pone.0220679	2019
Phylogeny	Reclassification of Brevibacterium frigoritolerans DSM 8801(T) as Bacillus frigoritolerans comb. nov. Based on Genome Analysis.	Liu GH, Liu B, Wang JP, Che JM, Li PF	Curr Microbiol	10.1007/s00284-020-01964-x	2020
Genetics	Draft Genome Sequence of Bacillus simplex DSM 1321 for Setting Up Phylogenomics in Genomic Taxonomy of the Bacillus-Like Bacteria.	Liu GH, Liu B, Wang JP, Che JM, Chen QQ, Chen Z	Genome Announc	10.1128/genomeA.00574-16	2016
Phylogeny	Bacillus loiseleuriae sp. nov., isolated from rhizosphere soil from a loiseleuria plant.	Liu B, Liu GH, Zhu YJ, Wang JP, Che JM, Chen QQ, Chen Z	Int J Syst Evol Microbiol	10.1099/ijsem.0.001107	2016
Phylogeny	Bacillus gossypii sp. nov., isolated from the stem of Gossypium hirsutum.	Kampfer P, Busse HJ, McInroy JA, Glaeser SP	Int J Syst Evol Microbiol	10.1099/ijsem.0.000555	2015
Phylogeny	Bacillus cihuensis sp. nov., isolated from rhizosphere soil of a plant in the Cihu area of Taiwan.	Liu B, Liu GH, Sengonca C, Schumann P, Wang MK, Tang JY, Chen MC	Antonie Van Leeuwenhoek	10.1007/s10482-014-0284-3	2014
Phylogeny	Bacillus huizhouensis sp. nov., isolated from a paddy field soil.	Li J, Yang G, Wu M, Zhao Y, Zhou S	Antonie Van Leeuwenhoek	10.1007/s10482-014-0208-2	2014
Phylogeny	Bacillus endoradicis sp. nov., an endophytic bacterium isolated from soybean root.	Zhang YZ, Chen WF, Li M, Sui XH, Liu HC, Zhang XX, Chen WX	Int J Syst Evol Microbiol	10.1099/ijs.0.028936-0	2011
Phylogeny	Bacillus butanolivorans sp. nov., a species with industrial application for the remediation of n-butanol.	Kuisiene N, Raugalas J, Sproer C, Kroppenstedt RM, Chitavichius D	Int J Syst Evol Microbiol	10.1099/ijs.0.65332-0	2008
Phylogeny	Peribacillus castrilensis sp. nov.: A Plant-Growth-Promoting and Biocontrol Species Isolated From a River Otter in Castril, Granada, Southern Spain.	Rodriguez M, Reina JC, Sampedro I, Llamas I, Martinez-Checa F	Front Plant Sci	10.3389/fpls.2022.896728	2022

References

#519	Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 1321
#20215	Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )
#20218	Verslyppe, B., De Smet, W., De Baets, B., De Vos, P., Dawyndt P.: StrainInfo introduces electronic passports for microorganisms.. Syst Appl Microbiol. 37: 42 - 50 2014 ( DOI 10.1016/j.syapm.2013.11.002 , PubMed 24321274 )
#22903	Isao Yumoto, Kikue Hirota, Shingo Yamaga, Yoshinobu Nodasaka, Tsuneshirou Kawasaki, Hidetoshi Matsuyama, Kenji Nakajima: Bacillus asahii sp. nov., a novel bacterium isolated from soil with the ability to deodorize the bad smell generated from short-chain fatty acids. IJSEM 54: 1997 - 2001 2004 ( DOI 10.1099/ijs.0.03014-0 , PubMed 15545424 )
#22904	Yun Zeng Zhang, Wen Feng Chen, Mao Li, Xin Hua Sui, Hong-Can Liu, Xiao Xia Zhang, Wen Xin Chen: Bacillus endoradicis sp. nov., an endophytic bacterium isolated from soybean root. IJSEM 62: 359 - 363 2012 ( DOI 10.1099/ijs.0.028936-0 , PubMed 21441377 )
#34193	; Curators of the CIP;
#66792	Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .
#67770	Japan Collection of Microorganism (JCM) ; Curators of the JCM;
#68371	Automatically annotated from API 50CH acid .
#68382	Automatically annotated from API zym .
#69479	João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta .
#122621	Collection of Institut Pasteur ; Curators of the CIP; CIP 106934
#124043	Isabel Schober, Julia Koblitz: Data extracted from sequence databases, automatically matched based on designation and taxonomy .
#125438	Julia Koblitz, Lorenz Christian Reimer, Rüdiger Pukall, Jörg Overmann: Predicting bacterial phenotypic traits through improved machine learning using high-quality, curated datasets. 2024 ( DOI 10.1101/2024.08.12.607695 )
#125439	Philipp Münch, René Mreches, Martin Binder, Hüseyin Anil Gündüz, Xiao-Yin To, Alice McHardy: deepG: Deep Learning for Genome Sequence Data. R package version 0.3.1 .
#126262	A. Lissin, I. Schober, J. F. Witte, H. Lüken, A. Podstawka, J. Koblitz, B. Bunk, P. Dawyndt, P. Vandamme, P. de Vos, J. Overmann, L. C. Reimer: StrainInfo—the central database for linked microbial strain identifiers. ( DOI 10.1093/database/baaf059 )

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Peribacillus simplex (DSM 1321, ATCC 49097, NRS 960)

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