Dactylosporangium salmoneum (DSM 43910, ATCC 31222, IFO 14103)

Name: Dactylosporangium salmoneum (DSM 43910, ATCC 31222, IFO 14103)
Creator: BacDive
License: http://creativecommons.org/licenses/by/4.0/

BacDive ID 7879

Type strain

Strain Designation FD 25647

Culture col. no. DSM 43910 ATCC 31222 IFO 14103 JCM 3272 KCC A-0272 5 more

NCBI tax ID(s) 53361

Special Collections DSMZ JCM Wink compendium Literature strains

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Dactylosporangium salmoneum FD 25647 is an aerobe, spore-forming, mesophilic prokaryote that was isolated from soil.

spore-forming Gram-positive motile aerobe mesophilic genome sequence 16S sequence

Name and taxonomic classification

SI-ID 39948

ATCC 31222,DSM 43910,IFO 14103,JCM 3272,CCRC 12481,NBRC 14103,BCRC 12481,NRRL B-16294

@ref 20215

Last LPSN update 2025-12-16 09:48:41

Domain Bacillati

Phylum Actinomycetota

Class Actinomycetes

Order Micromonosporales

Family Micromonosporaceae

Genus Dactylosporangium

Species Dactylosporangium salmoneum

Full scientific name Dactylosporangium salmoneum (ex Celmer et al. 1978) Kim et al. 2010

Morphology

Cell morphology

@ref	Gram stain	Motility
29586	positive

Colony morphology

@ref	Colony color	Incubation period	Medium used
19978	Saffron yellow (1017)	10-14 days	ISP 2
19978	Sun yellow (1037)	10-14 days	ISP 3
19978	Beige (1011)	10-14 days	ISP 4
19978	Sun yellow (1037)	10-14 days	ISP 5
19978	Beige (1011)	10-14 days	ISP 6
19978	Beige (1011)	10-14 days	ISP 7

Multicellular morphology

@ref	Forms multicellular complex	Medium name
19978		ISP 2
19978		ISP 3
19978		ISP 4
19978		ISP 5
19978		ISP 6
19978		ISP 7

Pigmentation

29586

Productionno

Culture and growth conditions

Culture medium

@ref	Name	Medium link	Composition
11261	GYM STREPTOMYCES MEDIUM (DSMZ Medium 65)	Medium recipe at MediaDive	Name: GYM STREPTOMYCES MEDIUM (DSMZ Medium 65) Composition: Agar 18.0 g/l Malt extract 10.0 g/l Yeast extract 4.0 g/l Glucose 4.0 g/l CaCO3 2.0 g/l Distilled water
11261	N-Z-AMINE-MEDIUM (DSMZ Medium 554)	Medium recipe at MediaDive	Name: N-Z-AMINE-MEDIUM (DSMZ Medium 554) Composition: Starch 20.0 g/l Agar 20.0 g/l Glucose 10.0 g/l N-Z amine 5.0 g/l Yeast extract 5.0 g/l CaCO3 1.0 g/l Distilled water
19978	ISP 2		Name: ISP 2 / Yeast Malt Agar (5265); 5265 Composition Malt extract 10.0 g/l Yeast extract 4.0 g/l Glucose 4.0 g/l Agar 15.0 g/l Preparation: Sterilisation: 20 minutes at 121°C pH before sterilisation: 7.0 Usage: Maintenance and Taxonomy Organisms: All Actinomycetes
19978	ISP 3		Name: ISP 3; 5315 Composition Dog oat flakes 20.0 g/l Trace element solution (5314) 2.5 ml/l Agar 18.0 g/l Preparation: Oat flakes are cooked for 20 minutes, trace element solution and agar are added (in the case of non rolled oat flakes the suspension has to bee filtrated). Sterilisation: 20 minutes at 121°C pH before sterilisation: 7.8 Usage: Maintenance and taxonomy (e.g. SEM As liquid medium for metabolite production) Organisms: All Actinomycetes Trace element solution 5314 Name: Trace element solution 5314; 5314 Composition CaCl2 x H2O 3.0 g/l Fe-III-citrate 1.0 g/l MnSO4 0.2 g/l ZnCl2 0.1 g/l CuSO4 x 5 H2O 0.025 g/l Sodium tetra borate 0.2 g/l CoCl2 x 6 H2O 0.004 g/l Sodium molybdate 0.01 g/l Preparation: Use double destillated water. Sterilisation: 20 minutes at 121°C pH before sterilisation: Usage: Trace element solution for different media Organisms:
19978	ISP 4		Name: ISP 4; DSM 547 Solution I: Difco soluble starch, 10.0 g. Make a paste of the starch with a small amount of cold distilled water and bring to a volume of 500 ml. Solution II: CaCO3 2.0 g K2HPO4 (anhydrous) 1.0 g MgSO4 x 7 H2O 1.0 g NaCl 1.0 g (NH4)2SO4 2.0 g Distilled water 500.0 ml Trace salt solution (see below) 1.0 ml The pH should be between 7.0 and 7.4. Do not adjust if it is within this range. Mix solutions I and II together. Add 20.0 g agar. Liquify agar by steaming at 100°C for 10 to 20 min. Trace element solution: FeSO4 x 7 H2O 0.1 g MnCl2 x 4 H2O 0.1 g ZnSO4 x 7 H2O 0.1 g Distilled water 100.0 ml
19978	ISP 5		Name: ISP 5 (5323) Composition L-Asparagine 1.0 g/l Glycerol 10.0 g/l K2HPO4 1.0 g/l Salt solution (see preparation) 1.0 ml/l Agar 20.0 g/l Preparation: Salt solution 1.0 g FeSO4 x 7 H2O 1.0 g MnCl2 x 4 H2O 1.0 g ZNSO4 x 7 H2O in 100 ml water Sterilisation: 20 minutes at 121°C pH before sterilisation: 7.2 Usage: Maintenance and taxonomy Organisms: All Actinomycetes
19978	ISP 6		Name: ISP 6 (5318) Composition Peptone 15.0 g/l Proteose peptose 5.0 g/l Ferric ammonium citrate 0.5 g/l Sodium glycerophosphate 1.0 g/l Sodium thiosulfate 0.08 g/l Yeast extract 1.0 g/l Agar 15.0 g/l Sterilisation: 20 minutes at 121°C pH before sterilisation: Usage: Production of melanoid pigments Organisms: All Actinomycetes
19978	ISP 7		Name: ISP 7 (5322) Composition Glycerol 15.0 g/l L-Tyrosine 0.5 g/l L-Asparagine 1.0 g/l K2HPO4 0.5 g/l NaCl 0.5 g/l FeSO4 x 7 H2O 0.01 g/l Trace element solution 5343 1.0 ml/l Agar 20.0 Sterilisation: 20 minutes at 121°C pH before sterilisation: 7.3 Usage: Production of melanoid pigments Organisms: All Actinomycetes

Culture temp

@ref	Growth	Type	Temperature (°C)	Range
11261	positive	growth	28	mesophilic
19978	positive	optimum	28	mesophilic
29586	positive	growth	20-37
29586	positive	optimum	28	mesophilic
67770	positive	growth	28	mesophilic

Culture pH

@ref	Ability	Type	PH
29586	positive	optimum	7
29586	positive	growth	04-10

Physiology and metabolism

Oxygen tolerance

29586

Oxygen toleranceaerobe

Spore formation

29586

Spore formationyes

Compound production

@ref	Compound
11261	polycyclic ether antibiotic
67770	Antibiotic 44,161 (polycyclic ether)

Halophily

@ref	Salt	Growth	Tested relation	Concentration
29586	NaCl	positive	growth	1.5 %

Observation

67770

Observationquinones: MK-9(H₈), MK-9(H₆)

Metabolite utilization

@ref	Chebi-ID	Metabolite	Utilization activity
19978	22599 ChEBI	arabinose	+
29586	22599 ChEBI	arabinose	+
29586	17057 ChEBI	cellobiose	+
19978	62968 ChEBI	cellulose	-
29586	16947 ChEBI	citrate	+
29586	23652 ChEBI	dextrin	+
19978	28757 ChEBI	fructose	+
29586	28757 ChEBI	fructose	+
29586	28260 ChEBI	galactose	+
19978	17234 ChEBI	glucose	+
29586	17754 ChEBI	glycerol	+
29586	18403 ChEBI	L-arabitol	+
29586	17716 ChEBI	lactose	+
29586	25115 ChEBI	malate	+
29586	17306 ChEBI	maltose	+
19978	29864 ChEBI	mannitol	+
29586	29864 ChEBI	mannitol	+
29586	37684 ChEBI	mannose	+
29586	28053 ChEBI	melibiose	+
19978	17268 ChEBI	myo-inositol	-
29586	17268 ChEBI	myo-inositol	+
29586	17632 ChEBI	nitrate	+
29586	17272 ChEBI	propionate	+
29586	15361 ChEBI	pyruvate	+
19978	16634 ChEBI	raffinose	+
29586	16634 ChEBI	raffinose	+
19978	26546 ChEBI	rhamnose	+
29586	26546 ChEBI	rhamnose	+
29586	15963 ChEBI	ribitol	+
29586	17814 ChEBI	salicin	+
19978	17992 ChEBI	sucrose	+
29586	27082 ChEBI	trehalose	+
19978	18222 ChEBI	xylose	-
29586	18222 ChEBI	xylose	+

Metabolite production

@ref	Chebi-ID	Metabolite	Production
29586	16136 ChEBI	hydrogen sulfide

Enzymes

@ref	Value	Activity	Ec
68382	acid phosphatase	+	3.1.3.2	from API zym
68382	alkaline phosphatase	+	3.1.3.1	from API zym
68382	alpha-chymotrypsin	-	3.4.21.1	from API zym
68382	alpha-fucosidase	-	3.2.1.51	from API zym
68382	alpha-galactosidase	+	3.2.1.22	from API zym
68382	alpha-glucosidase	+	3.2.1.20	from API zym
68382	alpha-mannosidase	-	3.2.1.24	from API zym
68382	beta-galactosidase	+	3.2.1.23	from API zym
68382	beta-glucosidase	+	3.2.1.21	from API zym
68382	beta-glucuronidase	+	3.2.1.31	from API zym
68382	cystine arylamidase	-	3.4.11.3	from API zym
68382	esterase (C 4)	+		from API zym
68382	esterase lipase (C 8)	+		from API zym
29586	gelatinase	+
68382	leucine arylamidase	+	3.4.11.1	from API zym
68382	lipase (C 14)	-		from API zym
68382	N-acetyl-beta-glucosaminidase	+	3.2.1.52	from API zym
68382	naphthol-AS-BI-phosphohydrolase	+		from API zym
68382	trypsin	-	3.4.21.4	from API zym
68382	valine arylamidase	-		from API zym

API zym

@ref	Control	Alkaline phosphatase	Esterase (C 4)	2-naphtyl caprylateEsterase Lipase (C 8)	Lipase (C 14)	L-leucyl-2-naphthylamideLeucine arylamidase	L-valyl-2-naphthylamideValine arylamidase	L-cystyl-2-naphthylamideCystine arylamidase	Trypsin	alpha- Chymotrypsin	Acid phosphatase	Naphthol-AS-BI-phosphateNaphthol-AS-BI-phosphohydrolase	alpha- Galactosidase	beta- Galactosidase	beta- Glucuronidase	alpha- Glucosidase	beta- Glucosidase	N-acetyl-beta- glucosaminidase	alpha- Mannosidase	alpha- Fucosidase
19978	not determinedn.d.	+	+	+	-	+	-	-	-	-	+	+	+	+	+	+	+	+	-	-

Isolation, sampling and environmental information

Isolation source categories

Cat1	Cat2	Cat3
#Environmental	#Terrestrial	#Soil

Isolation

@ref	Sample type	Geographic location	Country	Country ISO 3 Code	Continent
11261	soil	Japan	Japan	JPN	Asia
67770	Soil		Japan	JPN	Asia

Interaction and safety

Risk assessment

@ref	Biosafety level	Biosafety level comment
11261	1	Risk group (German classification) According to TRBA 466

Sequence information

Genome sequences

@ref	Description	Assembly level	INSDC accession	NCBI tax ID	Score
124043	ASM3953252v1 assembly for Dactylosporangium salmoneum JCM 3272	scaffold	GCA_039532525	53361	10.97

Genome browser: GCA_039532525

16S sequences

@ref	Description	Accession	Length	NCBI tax ID
20218	Dactylosporangium salmoneum gene for 16S ribosomal RNA, partial sequence	D86938	1466	53361
20218	D.salmoneum 16S rRNA gene	X93195	1477	53361
11261	Dactylosporangium salmoneum strain NRRL B-16294 16S ribosomal RNA gene, partial sequence	FJ973607	1433	53361
124043	Dactylosporangium salmoneum strain JCM 3272 16S ribosomal RNA gene, partial sequence.	MT760432	1362	53361

GC content

@ref	GC-content (mol%)	Method
11261	73	thermal denaturation, midpoint method (Tm)
29586	73

Genome-based predictions

Literature

Topic	Title	Authors	Journal	DOI	Year
Metabolism	Genetic screening strategy for rapid access to polyether ionophore producers and products in actinomycetes.	Wang H, Liu N, Xi L, Rong X, Ruan J, Huang Y.	Appl Environ Microbiol	10.1128/aem.02915-10	2011
Phylogeny	Dactylosporangium tropicum sp. nov., isolated from soil.	Thawai C, Tanasupawat S, Kudo T	Int J Syst Evol Microbiol	10.1099/ijs.0.028829-0	2010
Phylogeny	Dactylosporangium luridum sp. nov., Dactylosporangium luteum sp. nov. and Dactylosporangium salmoneum sp. nov., nom. rev., isolated from soil.	Kim BY, Stach JEM, Weon HY, Kwon SW, Goodfellow M	Int J Syst Evol Microbiol	10.1099/ijs.0.016451-0	2010

References

#11261	Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 43910
#19978	Wink, J.: Compendium of Actinobacteria. HZI-Helmholtz-Centre for Infection Research, Braunschweig .
#20215	Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )
#20218	Verslyppe, B., De Smet, W., De Baets, B., De Vos, P., Dawyndt P.: StrainInfo introduces electronic passports for microorganisms.. Syst Appl Microbiol. 37: 42 - 50 2014 ( DOI 10.1016/j.syapm.2013.11.002 , PubMed 24321274 )
#29586	Barberan A, Caceres Velazquez H, Jones S, Fierer N.: Hiding in Plain Sight: Mining Bacterial Species Records for Phenotypic Trait Information. mSphere 2: 2017 ( DOI 10.1128/mSphere.00237-17 , PubMed 28776041 ) - originally annotated from #25978 (see below)
#67770	Japan Collection of Microorganism (JCM) ; Curators of the JCM;
#68382	Automatically annotated from API zym .
#124043	Isabel Schober, Julia Koblitz: Data extracted from sequence databases, automatically matched based on designation and taxonomy .
#126262	A. Lissin, I. Schober, J. F. Witte, H. Lüken, A. Podstawka, J. Koblitz, B. Bunk, P. Dawyndt, P. Vandamme, P. de Vos, J. Overmann, L. C. Reimer: StrainInfo—the central database for linked microbial strain identifiers. ( DOI 10.1093/database/baaf059 )

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Dactylosporangium salmoneum (DSM 43910, ATCC 31222, IFO 14103)

Name and taxonomic classification

Morphology

Cell morphology

Colony morphology

Multicellular morphology

Pigmentation

Culture and growth conditions

Culture medium

Culture temp

Culture pH

Physiology and metabolism

Oxygen tolerance

Spore formation

Compound production

Halophily

Observation

Metabolite utilization

Metabolite production

Enzymes

API zym

Isolation, sampling and environmental information

Isolation source categories

Isolation

Interaction and safety

Risk assessment

Sequence information

Genome sequences

Genome browser: GCA_039532525

16S sequences

GC content

Genome-based predictions

Literature

Literature

References

BacDive

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