Name: Dactylosporangium darangshiense DLS-44
Creator: BacDive
License: https://creativecommons.org/licenses/by/4.0/

Strain identifier

BacDive ID: 7876

Type strain:

Species: Dactylosporangium darangshiense

Strain Designation: DLS-44

Culture col. no.: DSM 45260, KCTC 19560, JCM 17441, NBRC 109065

Strain history: <- SD Lee, Cheju Univ.

NCBI tax ID(s): 579108 (species)

SI-ID 404870

DSM 45260

Special Collections

Section

Dactylosporangium darangshiense DLS-44 is an aerobe, spore-forming, Gram-positive bacterium that was isolated from rock soil.

Gram-positive
spore-forming
aerobe
16S sequence
Bacteria

Information on the name and the taxonomic classification. Name and taxonomic classification

	Last LPSN update	14-12-2023 (DD-MM-YYYY)
	Domain	"Bacteria"
	Phylum	*Actinomycetota*
	Class	*Actinomycetes*
	Order	*Micromonosporales*
	Family	*Micromonosporaceae*
	Genus	*Dactylosporangium*
	Species	**Dactylosporangium darangshiense**
	Full Scientific Name (LPSN)	Dactylosporangium darangshiense Seo and Lee 2010

Information on morphological and physiological properties Morphology

[Ref.: #29423]	Gram stain	positive
[Ref.: #67771]	Gram stain	positive

[Ref.: #29423]

Pigment production

Multimedia content

[Ref.: #16012]

Caption:

Medium 65 28°C

[Ref.: #16012]

Intellectual property rights:

Information on culture and growth conditions Culture and growth conditions

[Ref.: #16012]

Culture medium

GYM STREPTOMYCES MEDIUM (DSMZ Medium 65)

[Ref.: #16012]

Culture medium growth

[Ref.: #16012]

Culture medium link

Medium recipe at MediaDive

[Ref.: #16012]

Culture medium composition

expand / minimize

[Ref.: #16012]

Culture medium

ISP2 MEDIUM (DSMZ Medium 987)

[Ref.: #16012]

Culture medium growth

[Ref.: #16012]

Culture medium link

Medium recipe at MediaDive

[Ref.: #16012]

Culture medium composition

expand / minimize

[Ref.: #16012]

Culture medium

GPHF-MEDIUM (DSMZ Medium 553)

[Ref.: #16012]

Culture medium growth

[Ref.: #16012]

Culture medium link

Medium recipe at MediaDive

[Ref.: #16012]

Culture medium composition

expand / minimize

		Temperature
[Ref.: #16012]	growth	28 °C
[Ref.: #29423]	growth	30-37 °C
[Ref.: #29423]	optimum	37 °C
[Ref.: #67770]	growth	28 °C
[Ref.: #67771]	growth	30 °C

	pH	Kind of pH		pH
[Ref.: #29423]			optimum	7.1
[Ref.: #29423]			growth	6.1-8.1

Information on physiology and metabolism Physiology and metabolism

[Ref.: #29423]	Oxygen tolerance	aerobe
[Ref.: #67771]	Oxygen tolerance	aerobe

[Ref.: #29423]

Ability of spore formation

yes

	Halophily	Salt	Tested relation		Salt conc.
[Ref.: #29423]		NaCl		growth	<1	%

[Ref.: #67770]

Observation

quinones: MK-9(H₈), MK-9(H₆)

	Metabolite	Utilization activity	Kind of utilization tested
[Ref.: #29423]	arabinose ChEBI	+	carbon source
[Ref.: #29423]	cellobiose ChEBI	+	carbon source
[Ref.: #29423]	esculin ChEBI	+	hydrolysis
[Ref.: #29423]	fructose ChEBI	+	carbon source
[Ref.: #29423]	glucose ChEBI	+	carbon source
[Ref.: #29423]	glycerol ChEBI	+	carbon source
[Ref.: #29423]	lactose ChEBI	+	carbon source
[Ref.: #29423]	maltose ChEBI	+	carbon source
[Ref.: #29423]	mannitol ChEBI	+	carbon source
[Ref.: #29423]	mannose ChEBI	+	carbon source
[Ref.: #29423]	melibiose ChEBI	+	carbon source
[Ref.: #29423]	raffinose ChEBI	+	carbon source
[Ref.: #29423]	rhamnose ChEBI	+	carbon source
[Ref.: #29423]	salicin ChEBI	+	carbon source
[Ref.: #29423]	sucrose ChEBI	+	carbon source
[Ref.: #29423]	trehalose ChEBI	+	carbon source
[Ref.: #29423]	xylose ChEBI	+	carbon source
	Only first 10 entries are displayed. Click here to see all.

	Enzymes	Enzyme	Enzyme activity	EC number
[Ref.: #29423]		catalase	+	1.11.1.6
[Ref.: #29423]		cytochrome oxidase	+	1.9.3.1

Information on isolation source, the sampling and environmental conditions Isolation, sampling and environmental information

[Ref.: #16012]	Sample type/isolated from	rock soil
[Ref.: #16012]	Geographic location (country and/or sea, region)	Jeju, peak of the mountain Darangshi Oreum
[Ref.: #16012]	Country	Republic of Korea
[Ref.: #16012]	Country ISO 3 Code	KOR
[Ref.: #16012]	Continent	Asia

[Ref.: #67770]	Sample type/isolated from	Rock soil
[Ref.: #67770]	Geographic location (country and/or sea, region)	Jeju
[Ref.: #67770]	Country	Republic of Korea
[Ref.: #67770]	Country ISO 3 Code	KOR
[Ref.: #67770]	Continent	Asia

[Ref.: #67771]	Sample type/isolated from	From rock surface from the peak of Darangshi Oreum (Small Mountain)
[Ref.: #67771]	Geographic location (country and/or sea, region)	Jeju
[Ref.: #67771]	Country	Republic of Korea
[Ref.: #67771]	Country ISO 3 Code	KOR
[Ref.: #67771]	Continent	Asia
* marker position based on {}

Isolation sources categories

#Environmental

#Terrestrial

#Soil

What are isolation sources categories?

Information on possible application of the strain and its possible interaction with e.g. potential hosts Safety information

[Ref.: #16012]

Biosafety level

Risk group (German classification)
According to TRBA 466

Information on genomic background e.g. entries in nucleic sequence databass Sequence information

16S Sequence information:

	Sequence accession description	Seq. accession number	Sequence length (bp)	Sequence database	Associated NCBI tax ID
[Ref.: #16012]	Dactylosporangium darangshiense partial 16S rRNA gene, strain DLS-44	FM882231	1422	GenBank ENA	579108 tax ID

[Ref.: #16012]	GC-content	69.8 mol%	high performance liquid chromatography (HPLC)
[Ref.: #29423]	GC-content	69.8 mol%

Availability in culture collections External links

[Ref.: #16012]

Culture collection no.

DSM 45260, KCTC 19560, JCM 17441, NBRC 109065

[Ref.: #77312]

SI-ID 404870

Literature:

Topic	Title	Authors	Journal	DOI	Year
Phylogeny	Dactylosporangium solaniradicis sp. nov., a novel actinobacterium isolated from a root of tomato (Solanum lycopersicum L.).	Fan J, Liu C, Ma Z, Zhou S, Li W, Li J, Chu L, Wang X, Xiang W	Antonie Van Leeuwenhoek	10.1007/s10482-016-0697-2	2016	*
Phylogeny	Dactylosporangium darangshiense sp. nov., isolated from rock soil.	Seo SH, Lee SD	Int J Syst Evol Microbiol	10.1099/ijs.0.012856-0	2009	*

References

#16012

Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 45260

#20215

Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )

#29423

Barberan A, Caceres Velazquez H, Jones S, Fierer N.: Hiding in Plain Sight: Mining Bacterial Species Records for Phenotypic Trait Information. mSphere 2: 2017 ( DOI 10.1128/mSphere.00237-17 , PubMed 28776041 ) - originally annotated from #25829 (see below)

#67770 Japan Collection of Microorganism (JCM) ; Curators of the JCM;
#67771 Korean Collection for Type Cultures (KCTC) ; Curators of the KCTC;

#77312

Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.: StrainInfo: A central database for resolving microbial strain identifiers . ( DOI 10.60712/SI-ID404870.1 )

#25829

IJSEM 1256 2010 ( DOI 10.1099/ijs.0.012856-0 , PubMed 19666791 )

* These data were automatically processed and therefore are not curated

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