Name: Dactylosporangium darangshiense DLS-44
Creator: BacDive
License: https://creativecommons.org/licenses/by/4.0/

Strain identifier

BacDive ID: 7876

Type strain:

Species: Dactylosporangium darangshiense

Strain Designation: DLS-44

Culture col. no.: DSM 45260, KCTC 19560, JCM 17441, NBRC 109065

Strain history: <- SD Lee, Cheju Univ.

NCBI tax ID(s): 579108 (species)

SI-ID 404870

DSM 45260

Special Collections

Section

When using BacDive for research please cite our paper

Dactylosporangium darangshiense DLS-44 is an aerobe, spore-forming, mesophilic bacterium that was isolated from rock soil.

Gram-positive
spore-forming
aerobe
mesophilic
16S sequence
Bacteria

Information on the name and the taxonomic classification. Name and taxonomic classification

	Last LPSN update	09-12-2024 (DD-MM-YYYY)
	Domain	*Bacteria*
	Phylum	*Actinomycetota*
	Class	*Actinomycetes*
	Order	*Micromonosporales*
	Family	*Micromonosporaceae*
	Genus	*Dactylosporangium*
	Species	**Dactylosporangium darangshiense**
	Full Scientific Name (LPSN)	Dactylosporangium darangshiense Seo and Lee 2010

Information on morphological and physiological properties Morphology

[Ref.: #29423]	Gram stain	positive
[Ref.: #67771]	Gram stain	positive

[Ref.: #29423]

Pigment production

Multimedia content

[Ref.: #16012]

Caption:

Medium 65 28°C

[Ref.: #16012]

Intellectual property rights:

Information on culture and growth conditions Culture and growth conditions

[Ref.: #16012]

Culture medium

GYM STREPTOMYCES MEDIUM (DSMZ Medium 65)

[Ref.: #16012]

Culture medium growth

[Ref.: #16012]

Culture medium link

Medium recipe at MediaDive

[Ref.: #16012]

Culture medium composition

expand / minimize

[Ref.: #16012]

Culture medium

ISP2 MEDIUM (DSMZ Medium 987)

[Ref.: #16012]

Culture medium growth

[Ref.: #16012]

Culture medium link

Medium recipe at MediaDive

[Ref.: #16012]

Culture medium composition

expand / minimize

[Ref.: #16012]

Culture medium

GPHF-MEDIUM (DSMZ Medium 553)

[Ref.: #16012]

Culture medium growth

[Ref.: #16012]

Culture medium link

Medium recipe at MediaDive

[Ref.: #16012]

Culture medium composition

expand / minimize

		Temperature
[Ref.: #16012]	growth	28 °C
[Ref.: #29423]	growth	30-37 °C
[Ref.: #29423]	optimum	37 °C
[Ref.: #67770]	growth	28 °C
[Ref.: #67771]	growth	30 °C

	pH	Kind of pH		pH
[Ref.: #29423]			optimum	7.1
[Ref.: #29423]			growth	6.1-8.1

Information on physiology and metabolism Physiology and metabolism

[Ref.: #29423]	Oxygen tolerance	aerobe
[Ref.: #67771]	Oxygen tolerance	aerobe

[Ref.: #29423]

Ability of spore formation

yes

	Halophily	Salt	Tested relation		Salt conc.
[Ref.: #29423]		NaCl		growth	<1	%

[Ref.: #67770]

Observation

quinones: MK-9(H₈), MK-9(H₆)

	Metabolite	Utilization activity	Kind of utilization tested
[Ref.: #29423]	arabinose ChEBI	+	carbon source
[Ref.: #29423]	cellobiose ChEBI	+	carbon source
[Ref.: #29423]	esculin ChEBI	+	hydrolysis
[Ref.: #29423]	fructose ChEBI	+	carbon source
[Ref.: #29423]	glucose ChEBI	+	carbon source
[Ref.: #29423]	glycerol ChEBI	+	carbon source
[Ref.: #29423]	lactose ChEBI	+	carbon source
[Ref.: #29423]	maltose ChEBI	+	carbon source
[Ref.: #29423]	mannitol ChEBI	+	carbon source
[Ref.: #29423]	mannose ChEBI	+	carbon source
[Ref.: #29423]	melibiose ChEBI	+	carbon source
[Ref.: #29423]	raffinose ChEBI	+	carbon source
[Ref.: #29423]	rhamnose ChEBI	+	carbon source
[Ref.: #29423]	salicin ChEBI	+	carbon source
[Ref.: #29423]	sucrose ChEBI	+	carbon source
[Ref.: #29423]	trehalose ChEBI	+	carbon source
[Ref.: #29423]	xylose ChEBI	+	carbon source
	Only first 10 entries are displayed. Click here to see all.

	Enzymes	Enzyme	Enzyme activity	EC number
[Ref.: #29423]		catalase	+	1.11.1.6
[Ref.: #29423]		cytochrome oxidase	+	1.9.3.1

Information on isolation source, the sampling and environmental conditions Isolation, sampling and environmental information

[Ref.: #16012]	Sample type/isolated from	rock soil
[Ref.: #16012]	Geographic location (country and/or sea, region)	Jeju, peak of the mountain Darangshi Oreum
[Ref.: #16012]	Country	Republic of Korea
[Ref.: #16012]	Country ISO 3 Code	KOR
[Ref.: #16012]	Continent	Asia

[Ref.: #67770]	Sample type/isolated from	Rock soil
[Ref.: #67770]	Geographic location (country and/or sea, region)	Jeju
[Ref.: #67770]	Country	Republic of Korea
[Ref.: #67770]	Country ISO 3 Code	KOR
[Ref.: #67770]	Continent	Asia

[Ref.: #67771]	Sample type/isolated from	From rock surface from the peak of Darangshi Oreum (Small Mountain)
[Ref.: #67771]	Geographic location (country and/or sea, region)	Jeju
[Ref.: #67771]	Country	Republic of Korea
[Ref.: #67771]	Country ISO 3 Code	KOR
[Ref.: #67771]	Continent	Asia
* marker position based on {}

Isolation sources categories

#Environmental

#Terrestrial

#Soil

What are isolation sources categories?

Information on possible application of the strain and its possible interaction with e.g. potential hosts Safety information

[Ref.: #16012]

Biosafety level

Risk group (German classification)
According to TRBA 466

Information on genomic background e.g. entries in nucleic sequence databass Sequence information

16S Sequence information:

	Sequence accession description	Seq. accession number	Sequence length (bp)	Sequence database	Associated NCBI tax ID
[Ref.: #16012]	Dactylosporangium darangshiense partial 16S rRNA gene, strain DLS-44	FM882231	1422	GenBank ENA	579108 tax ID

[Ref.: #16012]	GC-content	69.8 mol%	high performance liquid chromatography (HPLC)
[Ref.: #29423]	GC-content	69.8 mol%

Availability in culture collections External links

[Ref.: #16012]

Culture collection no.

DSM 45260, KCTC 19560, JCM 17441, NBRC 109065

[Ref.: #77312]

SI-ID 404870

Literature:

Topic	Title	Authors	Journal	DOI	Year
Phylogeny	Dactylosporangium solaniradicis sp. nov., a novel actinobacterium isolated from a root of tomato (Solanum lycopersicum L.).	Fan J, Liu C, Ma Z, Zhou S, Li W, Li J, Chu L, Wang X, Xiang W	Antonie Van Leeuwenhoek	10.1007/s10482-016-0697-2	2016	*
Phylogeny	Dactylosporangium darangshiense sp. nov., isolated from rock soil.	Seo SH, Lee SD	Int J Syst Evol Microbiol	10.1099/ijs.0.012856-0	2009	*

References

#16012

Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 45260

#20215

Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )

#29423

Barberan A, Caceres Velazquez H, Jones S, Fierer N.: Hiding in Plain Sight: Mining Bacterial Species Records for Phenotypic Trait Information. mSphere 2: 2017 ( DOI 10.1128/mSphere.00237-17 , PubMed 28776041 ) - originally annotated from #25829 (see below)

#67770 Japan Collection of Microorganism (JCM) ; Curators of the JCM;
#67771 Korean Collection for Type Cultures (KCTC) ; Curators of the KCTC;

#77312

Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.: StrainInfo: A central database for resolving microbial strain identifiers . ( DOI 10.60712/SI-ID404870.1 )

#25829

IJSEM 1256 2010 ( DOI 10.1099/ijs.0.012856-0 , PubMed 19666791 )

* These data were automatically processed and therefore are not curated

Change proposal

You found an error in BacDive? Please tell us about it!

Note that changes will be reviewed and judged. If your changes are legitimate, changes will occur within the next BacDive update. Only proposed changes supported by the according reference will be reviewed. The BacDive team reserves the right to reject proposed changes.

Search for species Dactylosporangium darangshiense in external resources:
SILVA
BRENDA
PANGAEA
GBIF