Actinoplanes teichomyceticus AB 8327 is an aerobe, spore-forming, Gram-positive bacterium that produces antibiotic compounds and was isolated from soil.
antibiotic compound production spore-forming Gram-positive aerobe genome sequence 16S sequence Bacteria| @ref 20215 |
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| Domain Bacteria |
| Phylum Actinomycetota |
| Class Actinomycetes |
| Order Micromonosporales |
| Family Micromonosporaceae |
| Genus Actinoplanes |
| Species Actinoplanes teichomyceticus |
| Full scientific name Actinoplanes teichomyceticus Wink et al. 2006 |
| Synonyms (1) |
| @ref: | 11347 |
| multimedia content: | DSM_43866.jpg |
| multimedia.multimedia content: | https://www.dsmz.de/microorganisms/photos/DSM_43866.jpg |
| caption: | Medium 252 28°C |
| intellectual property rights: | © Leibniz-Institut DSMZ |
| manual_annotation: | 1 |
| @ref | Name | Growth | Medium link | Composition | |
|---|---|---|---|---|---|
| 11347 | STARCH - MINERAL SALT - AGAR (STMS) (DSMZ Medium 252) | Medium recipe at MediaDive | Name: STARCH - MINERAL SALT - AGAR (STMS) (DSMZ Medium 252) Composition: Agar 14.985 g/l Starch 9.99001 g/l (NH4)2SO4 1.998 g/l CaCO3 1.998 g/l K2HPO4 0.999001 g/l MgSO4 x 7 H2O 0.999001 g/l NaCl 0.999001 g/l FeSO4 x 7 H2O 0.000999001 g/l MnCl2 x 4 H2O 0.000999001 g/l ZnSO4 x 7 H2O 0.000999001 g/l Distilled water | ||
| 11347 | GYM STREPTOMYCES MEDIUM (DSMZ Medium 65) | Medium recipe at MediaDive | Name: GYM STREPTOMYCES MEDIUM (DSMZ Medium 65) Composition: Agar 18.0 g/l Malt extract 10.0 g/l Yeast extract 4.0 g/l Glucose 4.0 g/l CaCO3 2.0 g/l Distilled water | ||
| 19610 | ISP 2 | Name: ISP 2 / Yeast Malt Agar (5265); 5265 Composition Malt extract 10.0 g/l Yeast extract 4.0 g/l Glucose 4.0 g/l Agar 15.0 g/l Preparation: Sterilisation: 20 minutes at 121°C pH before sterilisation: 7.0 Usage: Maintenance and Taxonomy Organisms: All Actinomycetes | |||
| 19610 | ISP 3 | Name: ISP 3; 5315 Composition Dog oat flakes 20.0 g/l Trace element solution (5314) 2.5 ml/l Agar 18.0 g/l Preparation: Oat flakes are cooked for 20 minutes, trace element solution and agar are added (in the case of non rolled oat flakes the suspension has to bee filtrated). Sterilisation: 20 minutes at 121°C pH before sterilisation: 7.8 Usage: Maintenance and taxonomy (e.g. SEM As liquid medium for metabolite production) Organisms: All Actinomycetes Trace element solution 5314 Name: Trace element solution 5314; 5314 Composition CaCl2 x H2O 3.0 g/l Fe-III-citrate 1.0 g/l MnSO4 0.2 g/l ZnCl2 0.1 g/l CuSO4 x 5 H2O 0.025 g/l Sodium tetra borate 0.2 g/l CoCl2 x 6 H2O 0.004 g/l Sodium molybdate 0.01 g/l Preparation: Use double destillated water. Sterilisation: 20 minutes at 121°C pH before sterilisation: Usage: Trace element solution for different media Organisms: | |||
| 19610 | ISP 4 | Name: ISP 4; DSM 547 Solution I: Difco soluble starch, 10.0 g. Make a paste of the starch with a small amount of cold distilled water and bring to a volume of 500 ml. Solution II: CaCO3 2.0 g K2HPO4 (anhydrous) 1.0 g MgSO4 x 7 H2O 1.0 g NaCl 1.0 g (NH4)2SO4 2.0 g Distilled water 500.0 ml Trace salt solution (see below) 1.0 ml The pH should be between 7.0 and 7.4. Do not adjust if it is within this range. Mix solutions I and II together. Add 20.0 g agar. Liquify agar by steaming at 100°C for 10 to 20 min. Trace element solution: FeSO4 x 7 H2O 0.1 g MnCl2 x 4 H2O 0.1 g ZnSO4 x 7 H2O 0.1 g Distilled water 100.0 ml | |||
| 19610 | ISP 5 | Name: ISP 5 (5323) Composition L-Asparagine 1.0 g/l Glycerol 10.0 g/l K2HPO4 1.0 g/l Salt solution (see preparation) 1.0 ml/l Agar 20.0 g/l Preparation: Salt solution 1.0 g FeSO4 x 7 H2O 1.0 g MnCl2 x 4 H2O 1.0 g ZNSO4 x 7 H2O in 100 ml water Sterilisation: 20 minutes at 121°C pH before sterilisation: 7.2 Usage: Maintenance and taxonomy Organisms: All Actinomycetes | |||
| 19610 | ISP 6 | Name: ISP 6 (5318) Composition Peptone 15.0 g/l Proteose peptose 5.0 g/l Ferric ammonium citrate 0.5 g/l Sodium glycerophosphate 1.0 g/l Sodium thiosulfate 0.08 g/l Yeast extract 1.0 g/l Agar 15.0 g/l Sterilisation: 20 minutes at 121°C pH before sterilisation: Usage: Production of melanoid pigments Organisms: All Actinomycetes | |||
| 19610 | ISP 7 | Name: ISP 7 (5322) Composition Glycerol 15.0 g/l L-Tyrosine 0.5 g/l L-Asparagine 1.0 g/l K2HPO4 0.5 g/l NaCl 0.5 g/l FeSO4 x 7 H2O 0.01 g/l Trace element solution 5343 1.0 ml/l Agar 20.0 Sterilisation: 20 minutes at 121°C pH before sterilisation: 7.3 Usage: Production of melanoid pigments Organisms: All Actinomycetes |
| @ref | Salt | Growth | Tested relation | Concentration | |
|---|---|---|---|---|---|
| 19610 | NaCl | positive | maximum | 7.5 % |
| 67770 | Observationquinones: MK-9(H4), MK-10(H4) |
| @ref | Chebi-ID | Metabolite | Utilization activity | Kind of utilization tested | |
|---|---|---|---|---|---|
| 68368 | 29016 ChEBI | arginine | + | hydrolysis | from API 20E |
| 68368 | 16947 ChEBI | citrate | - | assimilation | from API 20E |
| 68368 | 5291 ChEBI | gelatin | + | hydrolysis | from API 20E |
| 68368 | 25094 ChEBI | lysine | + | degradation | from API 20E |
| 68368 | 18257 ChEBI | ornithine | + | degradation | from API 20E |
| 68368 | 27897 ChEBI | tryptophan | - | energy source | from API 20E |
| 68368 | 16199 ChEBI | urea | + | hydrolysis | from API 20E |
| @ref | Value | Activity | Ec | |
|---|---|---|---|---|
| 68382 | acid phosphatase | + | 3.1.3.2 | from API zym |
| 68382 | alkaline phosphatase | + | 3.1.3.1 | from API zym |
| 68382 | alpha-chymotrypsin | - | 3.4.21.1 | from API zym |
| 68382 | alpha-fucosidase | - | 3.2.1.51 | from API zym |
| 68382 | alpha-galactosidase | - | 3.2.1.22 | from API zym |
| 68382 | alpha-glucosidase | - | 3.2.1.20 | from API zym |
| 68382 | alpha-mannosidase | - | 3.2.1.24 | from API zym |
| 68368 | arginine dihydrolase | + | 3.5.3.6 | from API 20E |
| 68382 | beta-galactosidase | - | 3.2.1.23 | from API zym |
| 68368 | beta-galactosidase | - | 3.2.1.23 | from API 20E |
| 68382 | beta-glucosidase | - | 3.2.1.21 | from API zym |
| 68382 | beta-glucuronidase | - | 3.2.1.31 | from API zym |
| 68382 | cystine arylamidase | - | 3.4.11.3 | from API zym |
| 68382 | esterase (C 4) | + | from API zym | |
| 68382 | esterase lipase (C 8) | + | from API zym | |
| 68368 | gelatinase | + | from API 20E | |
| 68382 | leucine arylamidase | - | 3.4.11.1 | from API zym |
| 68382 | lipase (C 14) | - | from API zym | |
| 68368 | lysine decarboxylase | + | 4.1.1.18 | from API 20E |
| 68382 | N-acetyl-beta-glucosaminidase | - | 3.2.1.52 | from API zym |
| 68382 | naphthol-AS-BI-phosphohydrolase | + | from API zym | |
| 68368 | ornithine decarboxylase | + | 4.1.1.17 | from API 20E |
| 68382 | trypsin | - | 3.4.21.4 | from API zym |
| 68368 | tryptophan deaminase | - | 4.1.99.1 | from API 20E |
| 68368 | urease | + | 3.5.1.5 | from API 20E |
| 68382 | valine arylamidase | - | from API zym |
| @ref | pathway | enzyme coverage | annotated reactions | external links | |
|---|---|---|---|---|---|
| 66794 | biotin biosynthesis | 100 | 4 of 4 | ||
| 66794 | octane oxidation | 100 | 3 of 3 | ||
| 66794 | sulfopterin metabolism | 100 | 4 of 4 | ||
| 66794 | coenzyme A metabolism | 100 | 4 of 4 | ||
| 66794 | formaldehyde oxidation | 100 | 3 of 3 | ||
| 66794 | valine metabolism | 100 | 9 of 9 | ||
| 66794 | glycogen metabolism | 100 | 5 of 5 | ||
| 66794 | molybdenum cofactor biosynthesis | 100 | 9 of 9 | ||
| 66794 | phenylacetate degradation (aerobic) | 100 | 5 of 5 | ||
| 66794 | adipate degradation | 100 | 2 of 2 | ||
| 66794 | kanosamine biosynthesis II | 100 | 2 of 2 | ||
| 66794 | starch degradation | 100 | 10 of 10 | ||
| 66794 | ethanol fermentation | 100 | 2 of 2 | ||
| 66794 | threonine metabolism | 100 | 10 of 10 | ||
| 66794 | cis-vaccenate biosynthesis | 100 | 2 of 2 | ||
| 66794 | ppGpp biosynthesis | 100 | 4 of 4 | ||
| 66794 | L-lactaldehyde degradation | 100 | 3 of 3 | ||
| 66794 | cardiolipin biosynthesis | 100 | 7 of 7 | ||
| 66794 | denitrification | 100 | 2 of 2 | ||
| 66794 | methylglyoxal degradation | 100 | 5 of 5 | ||
| 66794 | folate polyglutamylation | 100 | 1 of 1 | ||
| 66794 | suberin monomers biosynthesis | 100 | 2 of 2 | ||
| 66794 | anapleurotic synthesis of oxalacetate | 100 | 1 of 1 | ||
| 66794 | UDP-GlcNAc biosynthesis | 100 | 3 of 3 | ||
| 66794 | CDP-diacylglycerol biosynthesis | 100 | 2 of 2 | ||
| 66794 | palmitate biosynthesis | 100 | 22 of 22 | ||
| 66794 | aerobactin biosynthesis | 100 | 1 of 1 | ||
| 66794 | cellulose degradation | 100 | 5 of 5 | ||
| 66794 | ceramide biosynthesis | 100 | 1 of 1 | ||
| 66794 | tetrahydrofolate metabolism | 92.86 | 13 of 14 | ||
| 66794 | phenylalanine metabolism | 92.31 | 12 of 13 | ||
| 66794 | leucine metabolism | 92.31 | 12 of 13 | ||
| 66794 | pentose phosphate pathway | 90.91 | 10 of 11 | ||
| 66794 | NAD metabolism | 88.89 | 16 of 18 | ||
| 66794 | serine metabolism | 88.89 | 8 of 9 | ||
| 66794 | chorismate metabolism | 88.89 | 8 of 9 | ||
| 66794 | aspartate and asparagine metabolism | 88.89 | 8 of 9 | ||
| 66794 | C4 and CAM-carbon fixation | 87.5 | 7 of 8 | ||
| 66794 | isoleucine metabolism | 87.5 | 7 of 8 | ||
| 66794 | flavin biosynthesis | 86.67 | 13 of 15 | ||
| 66794 | peptidoglycan biosynthesis | 86.67 | 13 of 15 | ||
| 66794 | heme metabolism | 85.71 | 12 of 14 | ||
| 66794 | reductive acetyl coenzyme A pathway | 85.71 | 6 of 7 | ||
| 66794 | glutathione metabolism | 85.71 | 12 of 14 | ||
| 66794 | photosynthesis | 85.71 | 12 of 14 | ||
| 66794 | vitamin B12 metabolism | 85.29 | 29 of 34 | ||
| 66794 | urea cycle | 84.62 | 11 of 13 | ||
| 66794 | purine metabolism | 84.04 | 79 of 94 | ||
| 66794 | 1,4-dihydroxy-6-naphthoate biosynthesis | 83.33 | 5 of 6 | ||
| 66794 | glycolate and glyoxylate degradation | 83.33 | 5 of 6 | ||
| 66794 | selenocysteine biosynthesis | 83.33 | 5 of 6 | ||
| 66794 | glycolysis | 82.35 | 14 of 17 | ||
| 66794 | methionine metabolism | 80.77 | 21 of 26 | ||
| 66794 | glycine betaine biosynthesis | 80 | 4 of 5 | ||
| 66794 | hydrogen production | 80 | 4 of 5 | ||
| 66794 | Entner Doudoroff pathway | 80 | 8 of 10 | ||
| 66794 | vitamin K metabolism | 80 | 4 of 5 | ||
| 66794 | 3-chlorocatechol degradation | 80 | 4 of 5 | ||
| 66794 | factor 420 biosynthesis | 80 | 4 of 5 | ||
| 66794 | tyrosine metabolism | 78.57 | 11 of 14 | ||
| 66794 | glutamate and glutamine metabolism | 78.57 | 22 of 28 | ||
| 66794 | citric acid cycle | 78.57 | 11 of 14 | ||
| 66794 | CO2 fixation in Crenarchaeota | 77.78 | 7 of 9 | ||
| 66794 | 4-hydroxymandelate degradation | 77.78 | 7 of 9 | ||
| 66794 | allantoin degradation | 77.78 | 7 of 9 | ||
| 66794 | lipid metabolism | 77.42 | 24 of 31 | ||
| 66794 | histidine metabolism | 75.86 | 22 of 29 | ||
| 66794 | alanine metabolism | 75.86 | 22 of 29 | ||
| 66794 | glycogen biosynthesis | 75 | 3 of 4 | ||
| 66794 | CMP-KDO biosynthesis | 75 | 3 of 4 | ||
| 66794 | gluconeogenesis | 75 | 6 of 8 | ||
| 66794 | dTDPLrhamnose biosynthesis | 75 | 6 of 8 | ||
| 66794 | acetate fermentation | 75 | 3 of 4 | ||
| 66794 | butanoate fermentation | 75 | 3 of 4 | ||
| 66794 | ketogluconate metabolism | 75 | 6 of 8 | ||
| 66794 | oxidative phosphorylation | 73.63 | 67 of 91 | ||
| 66794 | metabolism of disaccharids | 72.73 | 8 of 11 | ||
| 66794 | cysteine metabolism | 72.22 | 13 of 18 | ||
| 66794 | aclacinomycin biosynthesis | 71.43 | 5 of 7 | ||
| 66794 | ubiquinone biosynthesis | 71.43 | 5 of 7 | ||
| 66794 | propanol degradation | 71.43 | 5 of 7 | ||
| 66794 | pyrimidine metabolism | 71.11 | 32 of 45 | ||
| 66794 | tryptophan metabolism | 71.05 | 27 of 38 | ||
| 66794 | myo-inositol biosynthesis | 70 | 7 of 10 | ||
| 66794 | 4-hydroxyphenylacetate degradation | 70 | 7 of 10 | ||
| 66794 | vitamin B1 metabolism | 69.23 | 9 of 13 | ||
| 66794 | carotenoid biosynthesis | 68.18 | 15 of 22 | ||
| 66794 | IAA biosynthesis | 66.67 | 2 of 3 | ||
| 66794 | acetyl CoA biosynthesis | 66.67 | 2 of 3 | ||
| 66794 | (5R)-carbapenem carboxylate biosynthesis | 66.67 | 2 of 3 | ||
| 66794 | cyanate degradation | 66.67 | 2 of 3 | ||
| 66794 | d-mannose degradation | 66.67 | 6 of 9 | ||
| 66794 | acetoin degradation | 66.67 | 2 of 3 | ||
| 66794 | enterobactin biosynthesis | 66.67 | 2 of 3 | ||
| 66794 | non-pathway related | 65.79 | 25 of 38 | ||
| 66794 | isoprenoid biosynthesis | 65.38 | 17 of 26 | ||
| 66794 | polyamine pathway | 65.22 | 15 of 23 | ||
| 66794 | phenol degradation | 65 | 13 of 20 | ||
| 66794 | degradation of pentoses | 64.29 | 18 of 28 | ||
| 66794 | lysine metabolism | 64.29 | 27 of 42 | ||
| 66794 | d-xylose degradation | 63.64 | 7 of 11 | ||
| 66794 | degradation of sugar alcohols | 62.5 | 10 of 16 | ||
| 66794 | 6-hydroxymethyl-dihydropterin diphosphate biosynthesis | 62.5 | 5 of 8 | ||
| 66794 | 3-phenylpropionate degradation | 60 | 9 of 15 | ||
| 66794 | propionate fermentation | 60 | 6 of 10 | ||
| 66794 | metabolism of amino sugars and derivatives | 60 | 3 of 5 | ||
| 66794 | lipoate biosynthesis | 60 | 3 of 5 | ||
| 66794 | gallate degradation | 60 | 3 of 5 | ||
| 66794 | elloramycin biosynthesis | 60 | 3 of 5 | ||
| 66794 | arginine metabolism | 58.33 | 14 of 24 | ||
| 66794 | androgen and estrogen metabolism | 56.25 | 9 of 16 | ||
| 66794 | degradation of sugar acids | 56 | 14 of 25 | ||
| 66794 | degradation of hexoses | 55.56 | 10 of 18 | ||
| 66794 | vitamin B6 metabolism | 54.55 | 6 of 11 | ||
| 66794 | proline metabolism | 54.55 | 6 of 11 | ||
| 66794 | coenzyme M biosynthesis | 50 | 5 of 10 | ||
| 66794 | ribulose monophosphate pathway | 50 | 1 of 2 | ||
| 66794 | mannosylglycerate biosynthesis | 50 | 1 of 2 | ||
| 66794 | aminopropanol phosphate biosynthesis | 50 | 1 of 2 | ||
| 66794 | pantothenate biosynthesis | 50 | 3 of 6 | ||
| 66794 | lactate fermentation | 50 | 2 of 4 | ||
| 66794 | phenylmercury acetate degradation | 50 | 1 of 2 | ||
| 66794 | toluene degradation | 50 | 2 of 4 | ||
| 66794 | grixazone biosynthesis | 50 | 1 of 2 | ||
| 66794 | degradation of aromatic, nitrogen containing compounds | 50 | 6 of 12 | ||
| 66794 | quinate degradation | 50 | 1 of 2 | ||
| 66794 | bile acid biosynthesis, neutral pathway | 47.06 | 8 of 17 | ||
| 66794 | phosphatidylethanolamine bioynthesis | 46.15 | 6 of 13 | ||
| 66794 | sulfate reduction | 46.15 | 6 of 13 | ||
| 66794 | arachidonic acid metabolism | 44.44 | 8 of 18 | ||
| 66794 | lipid A biosynthesis | 44.44 | 4 of 9 | ||
| 66794 | nitrate assimilation | 44.44 | 4 of 9 | ||
| 66794 | daunorubicin biosynthesis | 44.44 | 4 of 9 | ||
| 66794 | ascorbate metabolism | 40.91 | 9 of 22 | ||
| 66794 | D-cycloserine biosynthesis | 40 | 2 of 5 | ||
| 66794 | ethylmalonyl-CoA pathway | 40 | 2 of 5 | ||
| 66794 | arachidonate biosynthesis | 40 | 2 of 5 | ||
| 66794 | glycine metabolism | 40 | 4 of 10 | ||
| 66794 | bacilysin biosynthesis | 40 | 2 of 5 | ||
| 66794 | carnitine metabolism | 37.5 | 3 of 8 | ||
| 66794 | sphingosine metabolism | 33.33 | 2 of 6 | ||
| 66794 | phenylpropanoid biosynthesis | 30.77 | 4 of 13 | ||
| 66794 | benzoyl-CoA degradation | 28.57 | 2 of 7 | ||
| 66794 | chlorophyll metabolism | 27.78 | 5 of 18 | ||
| 66794 | dolichyl-diphosphooligosaccharide biosynthesis | 27.27 | 3 of 11 | ||
| 66794 | catecholamine biosynthesis | 25 | 1 of 4 | ||
| 66794 | vitamin E metabolism | 25 | 1 of 4 | ||
| 66794 | cyclohexanol degradation | 25 | 1 of 4 | ||
| 66794 | methanogenesis from CO2 | 25 | 3 of 12 | ||
| 66794 | alginate biosynthesis | 25 | 1 of 4 |
| @ref | Description | Assembly level | INSDC accession | BV-BRC accession | IMG accession | NCBI tax ID | Score | |
|---|---|---|---|---|---|---|---|---|
| 66792 | ASM371110v1 assembly for Actinoplanes teichomyceticus ATCC 31121 | complete | 457423 | 91.88 | ||||
| 66792 | Actinoplanes teichomyceticus DSM 43866 | complete | 1867 | 90.12 | ||||
| 66792 | ASM782991v1 assembly for Actinoplanes teichomyceticus DSM 43866 | contig | 1867 | 69.79 | ||||
| 66792 | ASM1686241v1 assembly for Actinoplanes teichomyceticus NBRC 13999 | contig | 1867 | 29.66 |
| @ref | Description | Accession | Length | Database | NCBI tax ID | |
|---|---|---|---|---|---|---|
| 20218 | Actinoplanes teichomyceticus gene for 16S rRNA, partial sequence | AB047513 | 1472 | 1867 | ||
| 20218 | Actinoplanes teichomyceticus partial 16S rRNA gene, strain IMSNU 20043 | AJ277584 | 1456 | 1867 | ||
| 11347 | Actinoplanes teichomyceticus 16S rRNA gene, type strain DSM 43866T | AJ865472 | 1365 | 1867 |
| @ref | Trait | Model | Prediction | Confidence in % | In training data |
|---|---|---|---|---|---|
| 125439 | spore_formation | BacteriaNetⓘ | yes | 83.10 | no |
| 125439 | motility | BacteriaNetⓘ | no | 84.80 | no |
| 125439 | gram_stain | BacteriaNetⓘ | positive | 99.50 | no |
| 125439 | oxygen_tolerance | BacteriaNetⓘ | obligate aerobe | 99.10 | no |
| @ref | Trait | Model | Prediction | Confidence in % | In training data |
|---|---|---|---|---|---|
| 125438 | gram-positive | gram-positiveⓘ | yes | 89.45 | yes |
| 125438 | anaerobic | anaerobicⓘ | no | 91.12 | yes |
| 125438 | aerobic | aerobicⓘ | yes | 88.46 | yes |
| 125438 | spore-forming | spore-formingⓘ | yes | 90.23 | yes |
| 125438 | thermophilic | thermophileⓘ | no | 94.04 | yes |
| 125438 | flagellated | motile2+ⓘ | no | 62.83 | no |
| Topic | Title | Authors | Journal | DOI | Year | |
|---|---|---|---|---|---|---|
| Draft Genome Sequence of Teicoplanin-Producing Strain Actinoplanes teichomyceticus CPCC 203265. | Li X, Zhang C, Lei X, Wang L, Hong B. | Microbiol Resour Announc | 10.1128/mra.01091-19 | 2019 | ||
| Extending the Salinilactone Family. | Schlawis C, Harig T, Ehlers S, Guillen-Matus DG, Creamer KE, Jensen PR, Schulz S. | Chembiochem | 10.1002/cbic.201900764 | 2020 | ||
| Genetics | Metagenomic analysis of soybean endosphere microbiome to reveal signatures of microbes for health and disease. | Chouhan U, Gamad U, Choudhari JK. | J Genet Eng Biotechnol | 10.1186/s43141-023-00535-4 | 2023 | |
| A proof-reading mechanism for non-proteinogenic amino acid incorporation into glycopeptide antibiotics. | Kaniusaite M, Tailhades J, Marschall EA, Goode RJA, Schittenhelm RB, Cryle MJ. | Chem Sci | 10.1039/c9sc03678d | 2019 | ||
| Genetics | A Genomics-Based Discovery of Secondary Metabolite Biosynthetic Gene Clusters in the Potential Novel Strain Streptomyces sp. 21So2-11 Isolated from Antarctic Soil | Du Y, Han W, Hao P, Hu Y, Hu T, Zeng Y. | Microorganisms | 2024 | ||
| Genetics | Complete Genome Assembly of Amycolatopsis bartoniae DSM 45807T Allows the Characterization of a Novel Glycopeptide Biosynthetic Gene Cluster. | Stepanyshyn A, Ruckert-Reed C, Busche T, Yaruta B, Andreo-Vidal A, Marinelli F, Kalinowski J, Yushchuk O. | Genes (Basel) | 10.3390/genes15121651 | 2024 | |
| Cross-Talking of Pathway-Specific Regulators in Glycopeptide Antibiotics (Teicoplanin and A40926) Production. | Andreo-Vidal A, Yushchuk O, Marinelli F, Binda E. | Antibiotics (Basel) | 10.3390/antibiotics12040641 | 2023 | ||
| Specificity of Induction of Glycopeptide Antibiotic Resistance in the Producing Actinomycetes. | Binda E, Cappelletti P, Marinelli F, Marcone GL. | Antibiotics (Basel) | 10.3390/antibiotics7020036 | 2018 | ||
| A rare peptide scaffold in kineomicins, the glycopeptide antibiotics produced by Actinokineospora auranticolor DSM 44650. | Yushchuk O, Berini F, Zhong L, Ruckert-Reed C, Bernasconi E, Bartolone L, Busche T, Kalinowski J, Sussmuth RD, Marinelli F. | Commun Chem | 10.1038/s42004-025-01534-x | 2025 | ||
| Genetics Behind the Glycosylation Patterns in the Biosynthesis of Dalbaheptides. | Yushchuk O, Zhukrovska K, Berini F, Fedorenko V, Marinelli F. | Front Chem | 10.3389/fchem.2022.858708 | 2022 | ||
| Metabolism | Microbial transformation of 2-amino-4-methyl-3-nitropyridine. | Tully T, Liu M, Huang Y, Ye Q, Patel RN, Goswami A. | J Ind Microbiol Biotechnol | 10.1007/s10295-012-1189-7 | 2012 | |
| Pathogenicity | Relationship between glycopeptide production and resistance in the actinomycete Nonomuraea sp. ATCC 39727. | Marcone GL, Binda E, Carrano L, Bibb M, Marinelli F. | Antimicrob Agents Chemother | 10.1128/aac.02626-14 | 2014 | |
| Enzymology | Granulomatous amebic encephalitis in a child with acute lymphoblastic leukemia successfully treated with multimodal antimicrobial therapy and hyperbaric oxygen. | Maritschnegg P, Sovinz P, Lackner H, Benesch M, Nebl A, Schwinger W, Walochnik J, Urban C. | J Clin Microbiol | 10.1128/jcm.01456-10 | 2011 | |
| Metabolism | Overproduction of Ristomycin A by activation of a silent gene cluster in Amycolatopsis japonicum MG417-CF17. | Spohn M, Kirchner N, Kulik A, Jochim A, Wolf F, Muenzer P, Borst O, Gross H, Wohlleben W, Stegmann E. | Antimicrob Agents Chemother | 10.1128/aac.03512-14 | 2014 | |
| DNA in antibiotic preparations: absence of intact resistance genes. | Woegerbauer M, Lagler H, Graninger W, Burgmann H. | Antimicrob Agents Chemother | 10.1128/aac.49.6.2490-2494.2005 | 2005 | ||
| Genomic Insights into the Distribution and Phylogeny of Glycopeptide Resistance Determinants within the Actinobacteria Phylum. | Andreo-Vidal A, Binda E, Fedorenko V, Marinelli F, Yushchuk O. | Antibiotics (Basel) | 10.3390/antibiotics10121533 | 2021 | ||
| Pathogenicity | Novel mechanism of glycopeptide resistance in the A40926 producer Nonomuraea sp. ATCC 39727. | Marcone GL, Beltrametti F, Binda E, Carrano L, Foulston L, Hesketh A, Bibb M, Marinelli F. | Antimicrob Agents Chemother | 10.1128/aac.00106-10 | 2010 | |
| Metabolism | Essentiality of the Maltase AmlE in Maltose Utilization and Its Transcriptional Regulation by the Repressor AmlR in the Acarbose-Producing Bacterium Actinoplanes sp. SE50/110. | Schaffert L, Schneiker-Bekel S, Dymek S, Droste J, Persicke M, Busche T, Brandt D, Puhler A, Kalinowski J. | Front Microbiol | 10.3389/fmicb.2019.02448 | 2019 | |
| Pathogenicity | Comparison of the in vitro activities of teichomycin A2 and vancomycin against staphylococci and enterococci. | Cynamon MH, Granato PA. | Antimicrob Agents Chemother | 10.1128/aac.21.3.504 | 1982 | |
| Metabolism | Use of direct-infusion electrospray mass spectrometry to guide empirical development of improved conditions for expression of secondary metabolites from actinomycetes. | Zahn JA, Higgs RE, Hilton MD. | Appl Environ Microbiol | 10.1128/aem.67.1.377-386.2001 | 2001 | |
| Metabolism | Charge and lipophilicity govern the pharmacokinetics of glycopeptide antibiotics. | Pitkin DH, Mico BA, Sitrin RD, Nisbet LJ. | Antimicrob Agents Chemother | 10.1128/aac.29.3.440 | 1986 | |
| In vitro activity and human pharmacokinetics of teicoplanin. | Verbist L, Tjandramaga B, Hendrickx B, Van Hecken A, Van Melle P, Verbesselt R, Verhaegen J, De Schepper PJ. | Antimicrob Agents Chemother | 10.1128/aac.26.6.881 | 1984 | ||
| The Impact of Heterologous Regulatory Genes from Lipodepsipeptide Biosynthetic Gene Clusters on the Production of Teicoplanin and A40926. | Zhukrovska K, Binda E, Fedorenko V, Marinelli F, Yushchuk O. | Antibiotics (Basel) | 10.3390/antibiotics13020115 | 2024 | ||
| Biotechnology | Strain Improvement and Strain Maintenance Revisited. The Use of Actinoplanes teichomyceticus ATCC 31121 Protoplasts in the Identification of Candidates for Enhanced Teicoplanin Production. | Mellere L, Bava A, Capozzoli C, Branduardi P, Berini F, Beltrametti F | Antibiotics (Basel) | 10.3390/antibiotics11010024 | 2021 | |
| Metabolism | Microparticles enhance the formation of seven major classes of natural products in native and metabolically engineered actinobacteria through accelerated morphological development. | Kuhl M, Ruckert C, Glaser L, Beganovic S, Luzhetskyy A, Kalinowski J, Wittmann C | Biotechnol Bioeng | 10.1002/bit.27818 | 2021 | |
| Genetics | Genetic insights into the mechanism of teicoplanin self-resistance in Actinoplanes teichomyceticus. | Yushchuk O, Homoniuk V, Ostash B, Marinelli F, Fedorenko V | J Antibiot (Tokyo) | 10.1038/s41429-019-0274-9 | 2020 | |
| Enzymology | Cloning of metK from Actinoplanes teichomyceticus ATCC31121 and effect of its high expression on antibiotic production. | Kim DY, Hwang YI, Choi SU | J Microbiol Biotechnol | 10.4014/jmb.1101.01018 | 2011 | |
| Metabolism | Actinoplanes teichomyceticus ATCC 31121 as a cell factory for producing teicoplanin. | Taurino C, Frattini L, Marcone GL, Gastaldo L, Marinelli F | Microb Cell Fact | 10.1186/1475-2859-10-82 | 2011 | |
| Metabolism | Protoplast preparation and reversion to the normal filamentous growth in antibiotic-producing uncommon actinomycetes. | Marcone GL, Carrano L, Marinelli F, Beltrametti F | J Antibiot (Tokyo) | 10.1038/ja.2009.127 | 2010 | |
| Metabolism | Biotransformations of lipoglycopeptides to obtain novel antibiotics. | Gandolfi R, Jovetic S, Marinelli F, Molinari F | J Antibiot (Tokyo) | 10.1038/ja.2007.33 | 2007 | |
| Metabolism | Resistance to glycopeptide antibiotics in the teicoplanin producer is mediated by van gene homologue expression directing the synthesis of a modified cell wall peptidoglycan. | Beltrametti F, Consolandi A, Carrano L, Bagatin F, Rossi R, Leoni L, Zennaro E, Selva E, Marinelli F | Antimicrob Agents Chemother | 10.1128/AAC.01071-06 | 2007 | |
| Pathogenicity | Synthesis and antibacterial activity of alkyl derivatives of the glycopeptide antibiotic A40926 and their amides. | Maffioli SI, Ciabatti R, Romano G, Marzorati E, Preobrazhenskaya M, Pavlov A | Bioorg Med Chem Lett | 10.1016/j.bmcl.2005.05.076 | 2005 | |
| Metabolism | Biosynthetic studies of the glycopeptide teicoplanin by (1)H and (13)C NMR. | Heydorn A, Petersen BO, Duus JO, Bergmann S, Suhr-Jessen T, Nielsen J | J Biol Chem | 10.1074/jbc.275.9.6201 | 2000 | |
| Enzymology | Growth and production kinetics of a teicoplanin producing strain of Actinoplanes teichomyceticus. | Heydorn A, Suhr-Jessen T, Nielsen J | J Antibiot (Tokyo) | 10.7164/antibiotics.52.40 | 1999 | |
| Metabolism | Microbial de-mannosylation and mannosylation of teicoplanin derivatives. | Borghi A, Ferrari P, Gallo GG, Zanol M, Zerilli LF, Lancini GC | J Antibiot (Tokyo) | 10.7164/antibiotics.44.1444 | 1991 | |
| Metabolism | Teichomycins, new antibiotics from Actinoplanes teichomyceticus Nov. Sp. I. Description of the producer strain, fermentation studies and biological properties. | Parenti F, Beretta G, Berti M, Arioli V | J Antibiot (Tokyo) | 10.7164/antibiotics.31.276 | 1978 | |
| Phylogeny | Actinoplanes liguriensis sp. nov. and Actinoplanes teichomyceticus sp. nov. | Wink JM, Kroppenstedt RM, Schumann P, Seibert G, Stackebrandt E | Int J Syst Evol Microbiol | 10.1099/ijs.0.64240-0 | 2006 |
| #11347 | Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 43866 |
| #19610 | Wink, J.: Compendium of Actinobacteria. HZI-Helmholtz-Centre for Infection Research, Braunschweig . |
| #20215 | Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 ) |
| #20216 | Curators of the HKI: Collection Description Leibniz-Institut für Naturstoff-Forschung und Infektionsbiologie e. V. Hans-Knöll-Institut (HKI) . Leibniz-Institut für Naturstoff-Forschung und Infektionsbiologie e. V. Hans-Knöll-Institut (HKI): |
| #20218 | Verslyppe, B., De Smet, W., De Baets, B., De Vos, P., Dawyndt P.: StrainInfo introduces electronic passports for microorganisms.. Syst Appl Microbiol. 37: 42 - 50 2014 ( DOI 10.1016/j.syapm.2013.11.002 , PubMed 24321274 ) |
| #66792 | Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) . |
| #66794 | Antje Chang, Lisa Jeske, Sandra Ulbrich, Julia Hofmann, Julia Koblitz, Ida Schomburg, Meina Neumann-Schaal, Dieter Jahn, Dietmar Schomburg: BRENDA, the ELIXIR core data resource in 2021: new developments and updates. Nucleic Acids Res. 49: D498 - D508 2020 ( DOI 10.1093/nar/gkaa1025 , PubMed 33211880 ) |
| #67770 | Japan Collection of Microorganism (JCM) ; Curators of the JCM; |
| #67771 | Korean Collection for Type Cultures (KCTC) ; Curators of the KCTC; |
| #68368 | Automatically annotated from API 20E . |
| #68382 | Automatically annotated from API zym . |
| #125438 | Julia Koblitz, Lorenz Christian Reimer, Rüdiger Pukall, Jörg Overmann: Predicting bacterial phenotypic traits through improved machine learning using high-quality, curated datasets. 2024 ( DOI 10.1101/2024.08.12.607695 ) |
| #125439 | Philipp Münch, René Mreches, Martin Binder, Hüseyin Anil Gündüz, Xiao-Yin To, Alice McHardy: deepG: Deep Learning for Genome Sequence Data. R package version 0.3.1 . |
| #126262 | A. Lissin, I. Schober, J. F. Witte, H. Lüken, A. Podstawka, J. Koblitz, B. Bunk, P. Dawyndt, P. Vandamme, P. de Vos, J. Overmann, L. C. Reimer: StrainInfo—the central database for linked microbial strain identifiers. ( DOI 10.1093/database/baaf059 ) |
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