Enteractinococcus fodinae (DSM 22966, MTCC 9846, G-5)

Name: Enteractinococcus fodinae (DSM 22966, MTCC 9846, G-5)
Creator: BacDive
License: http://creativecommons.org/licenses/by/4.0/

BacDive ID 7793

Type strain

Strain Designation G-5, G5

Culture col. no. DSM 22966 MTCC 9846 G-5 G5 JCM 17931

NCBI tax ID(s) 684663

Special Collections DSMZ JCM Wink compendium Literature strains

History <- S. Mayilraj, MTCC; G-5 <- S. Dhanjal MTCC 9846 <-- S. Dhanjal G5.

Links

Enteractinococcus fodinae G-5 is an aerobe, Gram-positive, coccus-shaped bacterium that was isolated from soil from a coal mine.

Gram-positive coccus-shaped aerobe genome sequence 16S sequence Bacteria

Name and taxonomic classification

SI-ID 27991

JCM 17931

@ref 20215

Last LPSN update 2026-02-09 11:19:33

Domain Bacteria

Phylum Actinomycetota

Class Actinomycetes

Order Micrococcales

Family Micrococcaceae

Genus Enteractinococcus

Species Enteractinococcus fodinae

Full scientific name Enteractinococcus fodinae (Dhanjal et al. 2011) Cao et al. 2012

Synonyms (1)

Yaniella fodinae

Morphology

Cell morphology

@ref	Gram stain	Cell shape	Motility
29778	positive	coccus-shaped

Colony morphology

@ref	Colony color	Medium used
69234	Rape yellow (1021)	ISP 7
69234	Rape yellow (1021)	suter without tyrosine
69234	Signal yellow (1003)	ISP 6
69234	Traffic yellow (1023)	ISP 2
69234	Traffic yellow (1023)	ISP 3
69234	Traffic yellow (1023)	ISP 5
69234	Traffic yellow (1023)	suter with tyrosine
69234	Zinc yellow (1018)	ISP 4

Multicellular morphology

@ref	Complex name	Medium name
69234	Aerial mycelium	ISP 2
69234	Aerial mycelium	ISP 3
69234	Aerial mycelium	ISP 4
69234	Aerial mycelium	ISP 5
69234	Aerial mycelium	ISP 6
69234	Aerial mycelium	ISP 7
69234	Aerial mycelium	suter with tyrosine
69234	Aerial mycelium	suter without tyrosine

Pigmentation

@ref	Production	Name
29778
69234		melanin pigment
69234		soluble pigment

Multimedia

@ref:	69234
multimedia content:	DSM_22966_image5.jpeg
multimedia.multimedia content:	DSM_22966_image5.jpeg
caption:	(ISP6, SSM+T, SSM-T)
intellectual property rights:	Helmholtz-Zentrum für Infektionsforschung GmbH
manual_annotation:	1

@ref:	69234
multimedia content:	DSM_22966_image6.jpeg
multimedia.multimedia content:	DSM_22966_image6.jpeg
caption:	(ISP6, SSM+T, SSM-T)
intellectual property rights:	Helmholtz-Zentrum für Infektionsforschung GmbH
manual_annotation:	1

Culture and growth conditions

Culture temp

@ref	Growth	Type	Temperature (°C)
29778	positive	growth	15-37
29778	positive	optimum	30
67770	positive	growth	28

Culture pH

@ref	Ability	Type	PH	PH range
29778	positive	optimum	7.5
29778	positive	growth	5.2-11.0	alkaliphile

Physiology and metabolism

Oxygen tolerance

29778

Oxygen toleranceaerobe

Halophily

@ref	Salt	Growth	Tested relation	Concentration
29778	NaCl	positive	growth	0-15 %
29778	NaCl	positive	optimum	15 %
69234	NaCl	positive	growth	0-10 %

Observation

67770

Observationquinones: MK-8, MK-9, MK-7, MK-8

Metabolite utilization

@ref	Chebi-ID	Metabolite	Utilization activity	Kind of utilization tested
29778	22599 ChEBI	arabinose	+	carbon source
69234	22599 ChEBI	arabinose	+/-	growth
69234	62968 ChEBI	cellulose	+/-	growth
68379	17634 ChEBI	D-glucose	-	fermentation	from API Coryne
68379	16899 ChEBI	D-mannitol	-	fermentation	from API Coryne
68379	16988 ChEBI	D-ribose	-	fermentation	from API Coryne
68379	65327 ChEBI	D-xylose	-	fermentation	from API Coryne
68379	4853 ChEBI	esculin	-	hydrolysis	from API Coryne
29778	28757 ChEBI	fructose	+	carbon source
69234	28757 ChEBI	fructose	+	growth
29778	33984 ChEBI	fucose	+	carbon source
29778	28260 ChEBI	galactose	+	carbon source
29778	24175 ChEBI	galacturonate	+	carbon source
68379	5291 ChEBI	gelatin	-	hydrolysis	from API Coryne
29778	17234 ChEBI	glucose	+	carbon source
69234	17234 ChEBI	glucose	+/-	growth
68379	28087 ChEBI	glycogen	-	fermentation	from API Coryne
69234	17268 ChEBI	inositol	+/-	growth
29778	17716 ChEBI	lactose	+	carbon source
68379	17716 ChEBI	lactose	-	fermentation	from API Coryne
68379	17306 ChEBI	maltose	-	fermentation	from API Coryne
69234	37684 ChEBI	mannose	+	growth
29778	37657 ChEBI	methyl D-glucoside	+	carbon source
29778	51850 ChEBI	methyl pyruvate	+	carbon source
68379	17632 ChEBI	nitrate	-	reduction	from API Coryne
29778	17272 ChEBI	propionate	+	carbon source
69234	16634 ChEBI	raffinose	+/-	growth
69234	26546 ChEBI	rhamnose	+/-	growth
29778	33942 ChEBI	ribose	+	carbon source
68379	17992 ChEBI	sucrose	-	fermentation	from API Coryne
69234	17992 ChEBI	sucrose	+/-	growth
29778	53423 ChEBI	tween 40	+	carbon source
29778	53426 ChEBI	tween 80	+	carbon source
68379	16199 ChEBI	urea	+	hydrolysis	from API Coryne
29778	18222 ChEBI	xylose	+	carbon source
69234	18222 ChEBI	xylose	+/-	growth

Enzymes

@ref	Value	Activity	Ec
68379	alkaline phosphatase	-	3.1.3.1	from API Coryne
68382	alkaline phosphatase	-	3.1.3.1	from API zym
68382	alpha-chymotrypsin	-	3.4.21.1	from API zym
68382	alpha-fucosidase	-	3.2.1.51	from API zym
29778	alpha-galactosidase	+	3.2.1.22
68382	alpha-galactosidase	-	3.2.1.22	from API zym
68382	alpha-glucosidase	-	3.2.1.20	from API zym
68379	alpha-glucosidase	-	3.2.1.20	from API Coryne
68382	alpha-mannosidase	-	3.2.1.24	from API zym
68382	beta-galactosidase	-	3.2.1.23	from API zym
68379	beta-galactosidase	-	3.2.1.23	from API Coryne
68382	beta-glucosidase	-	3.2.1.21	from API zym
68379	beta-glucosidase	-	3.2.1.21	from API Coryne
68382	beta-glucuronidase	-	3.2.1.31	from API zym
68379	beta-glucuronidase	-	3.2.1.31	from API Coryne
29778	catalase	+	1.11.1.6
68382	cystine arylamidase	-	3.4.11.3	from API zym
68382	esterase (C 4)	+		from API zym
68382	esterase lipase (C 8)	+		from API zym
68379	gelatinase	-		from API Coryne
68382	leucine arylamidase	+	3.4.11.1	from API zym
68382	N-acetyl-beta-glucosaminidase	-	3.2.1.52	from API zym
68379	N-acetyl-beta-glucosaminidase	-	3.2.1.52	from API Coryne
68379	pyrazinamidase	-	3.5.1.B15	from API Coryne
68379	pyrrolidonyl arylamidase	-	3.4.19.3	from API Coryne
68379	urease	+	3.5.1.5	from API Coryne

API coryne

@ref	Reduction of nitrateNIT	PYZ	PYRA	PAL	beta GUR	beta GAL	alpha GLU	beta NAG	ESC	URE	GEL	Control fermentationControl	GLU	RIB	XYL	MAN	MAL	LAC	SAC	GLYG	CAT
69234	-	-	-	-	-	-	-	-	-	+	-	not determinedn.d.	-	-	-	-	-	-	-	-	not determinedn.d.

API zym

@ref	Control	Alkaline phosphatase	Esterase (C 4)	2-naphtyl caprylateEsterase Lipase (C 8)	Lipase (C 14)	L-leucyl-2-naphthylamideLeucine arylamidase	L-valyl-2-naphthylamideValine arylamidase	L-cystyl-2-naphthylamideCystine arylamidase	Trypsin	alpha- Chymotrypsin	Acid phosphatase	Naphthol-AS-BI-phosphateNaphthol-AS-BI-phosphohydrolase	alpha- Galactosidase	beta- Galactosidase	beta- Glucuronidase	alpha- Glucosidase	beta- Glucosidase	N-acetyl-beta- glucosaminidase	alpha- Mannosidase	alpha- Fucosidase
69234	not determinedn.d.	-	+	+	+/-	+	+/-	-	+/-	-	+/-	+/-	-	-	-	-	-	-	-	-

Isolation, sampling and environmental information

Isolation source categories

Cat1	Cat2	Cat3
#Engineered	#Other	#Mine
#Environmental	#Terrestrial	#Soil

Isolation

@ref	Sample type	Country	Country ISO 3 Code	Continent
16562	soil from a coal mine	India	IND	Asia
67770	Soil from a coal mine	India	IND	Asia

Taxonmaps

69479

Global distribution of 16S sequence FJ871122 (>99% sequence identity) for Enteractinococcus fodinae from Microbeatlas

Aquatic Samples	27
Soil Samples	41
Animal Samples	166
Plant Samples	3
Total Samples	237

Interaction and safety

Risk assessment

@ref	Biosafety level	Biosafety level comment
16562	1	Risk group (German classification) According to TRBA 466

Sequence information

Genome sequences

@ref	Description	Assembly level	INSDC accession	BV-BRC accession	IMG accession	NCBI tax ID	Score
124043	ASM3954193v1 assembly for Enteractinococcus fodinae JCM 17931	contig	GCA_039541935			684663	72.34
124043	ASM3145839v1 assembly for Enteractinococcus fodinae DSM 22966	contig	GCA_031458395	684663.4	2923486541	684663	70.36

16S sequences

@ref	Description	Accession	Length	Database	NCBI tax ID
16562	Enteractinococcus fodinae strain G5 16S ribosomal RNA gene, complete sequence	FJ871122	1434		684663

GC content

@ref	GC-content (mol%)	Method
16562	61.6	thermal denaturation, midpoint method (Tm)
29778	61.6

Genome-based predictions

Literature

Topic	Title	Authors	Journal	DOI	Year
Phylogeny	Enteractinococcus lamae sp. nov. and Enteractinococcus viverrae sp. nov., isolated from animal faeces.	Chen X, Li GD, Li QY, Hu CJ, Qiu SM, Jiang Y, Jiang CL, Han L, Huang XS	Antonie Van Leeuwenhoek	10.1007/s10482-015-0603-3	2015
Phylogeny	Enteractinococcus coprophilus gen. nov., sp. nov., of the family Micrococcaceae, isolated from Panthera tigris amoyensis faeces, and transfer of Yaniella fodinae Dhanjal et al. 2011 to the genus Enteractinococcus as Enteractinococcus fodinae comb. nov.	Cao YR, Jiang Y, Jin RX, Han L, He WX, Li YL, Huang XS, Xue QH	Int J Syst Evol Microbiol	10.1099/ijs.0.034249-0	2012
Phylogeny	Yaniella fodinae sp. nov., isolated from a coal mine.	Dhanjal S, Ruckmani A, Cameotra SS, Pukall R, Klenk HP, Mayilraj S	Int J Syst Evol Microbiol	10.1099/ijs.0.020636-0	2010

References

#16562	Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 22966
#20215	Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )
#26158	IJSEM 535 2011 ( DOI 10.1099/ijs.0.020636-0 , PubMed 20382793 )
#29778	Barberan A, Caceres Velazquez H, Jones S, Fierer N.: Hiding in Plain Sight: Mining Bacterial Species Records for Phenotypic Trait Information. mSphere 2: 2017 ( DOI 10.1128/mSphere.00237-17 , PubMed 28776041 ) - originally annotated from #26158
#67770	Japan Collection of Microorganism (JCM) ; Curators of the JCM;
#68379	Automatically annotated from API Coryne .
#68382	Automatically annotated from API zym .
#69234	Wink, J.: Compendium of Actinobacteria. HZI-Helmholtz-Centre for Infection Research, Braunschweig .
#69479	João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta .
#124043	Isabel Schober, Julia Koblitz: Data extracted from sequence databases, automatically matched based on designation and taxonomy .
#126262	A. Lissin, I. Schober, J. F. Witte, H. Lüken, A. Podstawka, J. Koblitz, B. Bunk, P. Dawyndt, P. Vandamme, P. de Vos, J. Overmann, L. C. Reimer: StrainInfo—the central database for linked microbial strain identifiers. ( DOI 10.1093/database/baaf059 )

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Enteractinococcus fodinae (DSM 22966, MTCC 9846, G-5)

Name and taxonomic classification

Morphology

Cell morphology

Colony morphology

Multicellular morphology

Pigmentation

Multimedia

Culture and growth conditions

Culture temp

Culture pH

Physiology and metabolism

Oxygen tolerance

Halophily

Observation

Metabolite utilization

Enzymes

API coryne

API zym

Isolation, sampling and environmental information

Isolation source categories

Isolation

Taxonmaps

Interaction and safety

Risk assessment

Sequence information

Genome sequences

Genome browser: GCA_039541935

16S sequences

GC content

Genome-based predictions

Literature

Literature

References

BacDive

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