Name: Sinomonas soli CW 59
Creator: BacDive
License: http://creativecommons.org/licenses/by-nc/4.0/

Strain identifier

BacDive ID: 7791

Type strain:

Species: Sinomonas soli

Strain Designation: CW 59

Culture col. no.: DSM 26463, CCTCC AB 207193, KCTC 19389, JCM 19961

Strain history: <- Y Zhou, Nanjing Agri. Univ., China

NCBI tax ID(s): 991009 (species)

SI-ID 401095

DSM 26463

Other strains from Sinomonas soli

S. soli ID 02-1314, ID 98-275, FP 108, ...

Section

Sinomonas soli CW 59 is an aerobe, mesophilic, Gram-positive bacterium that was isolated from polluted forest soil.

Gram-positive
rod-shaped
aerobe
mesophilic
16S sequence
Bacteria

Information on the name and the taxonomic classification. Name and taxonomic classification

	Last LPSN update	14-12-2023 (DD-MM-YYYY)
	Domain	"Bacteria"
	Phylum	*Actinomycetota*
	Class	*Actinomycetes*
	Order	*Micrococcales*
	Family	*Micrococcaceae*
	Genus	*Sinomonas*
	Species	**Sinomonas soli**
	Full Scientific Name (LPSN)	Sinomonas soli Zhou et al. 2012

Information on morphological and physiological properties Morphology

[Ref.: #30183]	Gram stain	positive
[Ref.: #67771]	Gram stain	positive

[Ref.: #30183]	Cell shape	rod-shaped
[Ref.: #67771]	Cell shape	rod-shaped

[Ref.: #30183]

Pigment production

yes

Information on culture and growth conditions Culture and growth conditions

[Ref.: #18230]

Culture medium

TRYPTICASE SOY YEAST EXTRACT MEDIUM (DSMZ Medium 92)

[Ref.: #18230]

Culture medium growth

[Ref.: #18230]

Culture medium link

Medium recipe at MediaDive

[Ref.: #18230]

Culture medium composition

expand / minimize

		Temperature
[Ref.: #18230]	growth	28 °C
[Ref.: #30183]	growth	15-42 °C
[Ref.: #30183]	optimum	30-37 °C
[Ref.: #67770]	growth	28 °C
[Ref.: #67771]	growth	30 °C

[Ref.: #18230]	Temperature range	mesophilic
[Ref.: #30183]	Temperature range	mesophilic
[Ref.: #67770]	Temperature range	mesophilic
[Ref.: #67771]	Temperature range	mesophilic

	pH	Kind of pH		pH
[Ref.: #30183]			optimum	06-08
[Ref.: #30183]			growth	05-09

Information on physiology and metabolism Physiology and metabolism

[Ref.: #30183]	Oxygen tolerance	aerobe
[Ref.: #67771]	Oxygen tolerance	aerobe

	Halophily	Salt	Tested relation		Salt conc.
[Ref.: #30183]		NaCl		growth	0-3	%

[Ref.: #67770]	Observation	quinones: MK-9(H₂)
[Ref.: #67771]	Observation	quinones: MK-9(H2)

	Metabolite	Utilization activity	Kind of utilization tested
[Ref.: #30183]	esculin ChEBI	+	hydrolysis
[Ref.: #30183]	fructose ChEBI	+	carbon source
[Ref.: #30183]	mannitol ChEBI	+	carbon source
[Ref.: #30183]	mannose ChEBI	+	carbon source
[Ref.: #30183]	N-acetylglucosamine ChEBI	+	carbon source
[Ref.: #30183]	salicin ChEBI	+	carbon source
[Ref.: #30183]	sucrose ChEBI	+	carbon source
[Ref.: #30183]	tween 80 ChEBI	+	carbon source

	Enzymes	Enzyme	Enzyme activity	EC number
[Ref.: #30183]		catalase	+	1.11.1.6
[Ref.: #30183]		urease	+	3.5.1.5

Information on isolation source, the sampling and environmental conditions Isolation, sampling and environmental information

[Ref.: #18230]	Sample type/isolated from	polluted forest soil
[Ref.: #18230]	Geographic location (country and/or sea, region)	Anhui Province
[Ref.: #18230]	Country	China
[Ref.: #18230]	Country ISO 3 Code	CHN
[Ref.: #18230]	Continent	Asia

[Ref.: #67770]	Sample type/isolated from	Polluted forest soil
[Ref.: #67770]	Geographic location (country and/or sea, region)	Anhui Province
[Ref.: #67770]	Country	China
[Ref.: #67770]	Country ISO 3 Code	CHN
[Ref.: #67770]	Continent	Asia

[Ref.: #67771]	Sample type/isolated from	From polluted forest soil
[Ref.: #67771]	Geographic location (country and/or sea, region)	Anhui Province
[Ref.: #67771]	Country	China
[Ref.: #67771]	Country ISO 3 Code	CHN
[Ref.: #67771]	Continent	Asia
* marker position based on {}

Isolation sources categories

#Engineered	#Contamination	-
#Environmental	#Terrestrial	#Forest
#Environmental	#Terrestrial	#Soil

What are isolation sources categories?

[Ref.: #69479]

Global distribution of 16S sequence HQ605707 (>99% sequence identity) for Sinomonas from Microbeatlas

Aquatic Samples	434
Soil Samples	1972
Animal Samples	554
Plant Samples	155
Total Samples	3115

Information on possible application of the strain and its possible interaction with e.g. potential hosts Safety information

[Ref.: #18230]

Biosafety level

Risk group (German classification)
According to TRBA 466

Information on genomic background e.g. entries in nucleic sequence databass Sequence information

16S Sequence information:

	Sequence accession description	Seq. accession number	Sequence length (bp)	Sequence database	Associated NCBI tax ID
[Ref.: #18230]	Sinomonas soli strain CW 59 16S ribosomal RNA gene, partial sequence	HQ605707	1347	ENA	991009 tax ID

[Ref.: #18230]	GC-content	66.9 mol%
[Ref.: #67770]	GC-content	66.9 mol%	high performance liquid chromatography (HPLC)

Availability in culture collections External links

[Ref.: #18230]

Culture collection no.

DSM 26463, CCTCC AB 207193, KCTC 19389, JCM 19961

[Ref.: #77234]

SI-ID 401095

Literature:

Topic	Title	Authors	Journal	DOI	Year
Phylogeny	Sinomonas halotolerans sp. nov., an actinobacterium isolated from a soil sample.	Guo QQ, Ming H, Meng XL, Huang JR, Duan YY, Li SH, Li S, Zhang JX, Li WJ, Nie GX	Antonie Van Leeuwenhoek	10.1007/s10482-015-0543-y	2015	*
Phylogeny	Sinomonas susongensis sp. nov., isolated from the surface of weathered biotite.	Bao YY, Huang Z, Mao DM, Sheng XF, He LY	Int J Syst Evol Microbiol	10.1099/ijs.0.000064	2015	*
Phylogeny	Sinomonas humi sp. nov., an amylolytic actinobacterium isolated from mangrove forest soil.	Lee LH, Azman AS, Zainal N, Yin WF, Mutalib NA, Chan KG	Int J Syst Evol Microbiol	10.1099/ijs.0.000053	2015	*
Phylogeny	Description of Sinomonas soli sp. nov., reclassification of Arthrobacter echigonensis and Arthrobacter albidus (Ding et al. 2009) as Sinomonas echigonensis comb. nov. and Sinomonas albida comb. nov., respectively, and emended description of the genus Sinomonas.	Zhou Y, Chen X, Zhang Y, Wang W, Xu J	Int J Syst Evol Microbiol	10.1099/ijs.0.030361-0	2011	*

References

#18230

Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 26463

#20215

Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )

#30183

Barberan A, Caceres Velazquez H, Jones S, Fierer N.: Hiding in Plain Sight: Mining Bacterial Species Records for Phenotypic Trait Information. mSphere 2: 2017 ( DOI 10.1128/mSphere.00237-17 , PubMed 28776041 ) - originally annotated from #26531 (see below)

#67770 Japan Collection of Microorganism (JCM) ; Curators of the JCM;
#67771 Korean Collection for Type Cultures (KCTC) ; Curators of the KCTC;

#69479

João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta .

#77234

Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.: StrainInfo: A central database for resolving microbial strain identifiers . ( DOI 10.60712/SI-ID401095.1 )

#26531

IJSEM 764 2012 ( DOI 10.1099/ijs.0.030361-0 , PubMed 21571934 )

* These data were automatically processed and therefore are not curated

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