Name: Kocuria rosea DSM 20447
Creator: BacDive
License: http://creativecommons.org/licenses/by-nc/4.0/

Strain identifier

BacDive ID: 7641

Type strain:

Species: Kocuria rosea

Culture col. no.: DSM 20447, ATCC 186, CCM 679, NCTC 7523, CCUG 4312, IAM 1315, IFO 3768, JCM 11614, BCRC 11044, CECT 5052, CECT 52, CIP 71.15, IAM 14818, IMSNU 11063, IMSNU 21322, JCM 7236, KCCM 40158, KCTC 3137, KCTC 3199, KCTC 3488, LMG 14224, NBRC 3768, NCFB 975, NCIMB 11696, NRRL B-2977, PCM 548, VKM Ac-2200, VKM B-1236, VKM B-1823

Strain history: CCM 679 <-- ATCC 186 <-- R. S. Breed ("Micrococcus rubens") <-- Král Collection <-- W. Migula <-- O. Bujwid.

NCBI tax ID(s): 1275 (species)

Other strains from Kocuria rosea

K. rosea DSM 11630, ATCC 187, CCM 706
K. rosea DSM 12801, ATCC 49321, JCM 21325, ...
K. rosea ST000650(HKI),
K. rosea CIP 82.61, ATCC 516, CCM 839
K. rosea CIP 56.93
K. rosea CIP 68.26
K. rosea CCUG 50155 C
K. rosea I10A-01275, DSM 24530
K. rosea JCM 20141, ATCC 9815, BCRC 11577, ...
K. rosea JCM 20437, ATCC 412, CCM 633, IAM ...
K. rosea JCM 20438, ATCC 185, CCM 385, IAM ...

Section

Kocuria rosea DSM 20447 is an aerobe, mesophilic bacterium of the family Micrococcaceae.

aerobe
mesophilic
16S sequence
Bacteria
genome sequence

Information on the name and the taxonomic classification. Name and taxonomic classification

	Last LPSN update	25-08-2022 (DD-MM-YYYY)
	Domain	Bacteria
	Phylum	Actinomycetota
	Class	Actinomycetes
	Order	Micrococcales
	Family	Micrococcaceae
	Genus	Kocuria
	Species	Kocuria rosea
	Full Scientific Name (PNU)	Kocuria rosea (Flügge 1886) Stackebrandt et al. 1995

	Synonym	Kocuria erythromyxa
	Synonym	Micrococcus roseus
	Synonym	Deinococcus erythromyxa
	Synonym	Pelczaria aurantia

Information on morphological and physiological properties Morphology

[Ref.: #18746]	Colony color	Salmon orange
[Ref.: #18746]	Incubation period	10-14 days
[Ref.: #18746]	Cultivation medium used	5006

[Ref.: #18746]	Colony color	Salmon orange
[Ref.: #18746]	Incubation period	10-14 days
[Ref.: #18746]	Cultivation medium used	5425

[Ref.: #18746]	Colony color	Salmon orange
[Ref.: #18746]	Incubation period	10-14 days
[Ref.: #18746]	Cultivation medium used	5428

[Ref.: #18746]	Colony color	Salmon orange
[Ref.: #18746]	Incubation period	10-14 days
[Ref.: #18746]	Cultivation medium used	5530

[Ref.: #18746]	Colony color	Salmon orange
[Ref.: #18746]	Incubation period	10-14 days
[Ref.: #18746]	Cultivation medium used	ISP 2

[Ref.: #18746]	Medium Name (multicellularity)	ISP 2

[Ref.: #18746]	Medium Name (multicellularity)	5006

[Ref.: #18746]	Medium Name (multicellularity)	5425

[Ref.: #18746]	Medium Name (multicellularity)	5530

Information on culture and growth conditions Culture and growth conditions

[Ref.: #8819]

Culture medium

CORYNEBACTERIUM AGAR (DSMZ Medium 53)

[Ref.: #8819]

Culture medium growth

[Ref.: #8819]

Culture medium link

Medium recipe at MediaDive

[Ref.: #8819]

Culture medium composition

expand / minimize

[Ref.: #18746]

Culture medium

ISP 2

[Ref.: #18746]

Culture medium growth

[Ref.: #18746]

Culture medium composition

expand / minimize

[Ref.: #18746]

Culture medium

5006

[Ref.: #18746]

Culture medium growth

[Ref.: #18746]

Culture medium composition

expand / minimize

[Ref.: #18746]

Culture medium

5425

[Ref.: #18746]

Culture medium growth

[Ref.: #18746]

Culture medium composition

expand / minimize

[Ref.: #18746]

Culture medium

5428

[Ref.: #18746]

Culture medium growth

[Ref.: #18746]

Culture medium

5530

[Ref.: #18746]

Culture medium growth

[Ref.: #37340]

Culture medium

MEDIUM 72- for trypto casein soja agar

[Ref.: #37340]

Culture medium growth

[Ref.: #37340]

Culture medium composition

expand / minimize

		Temperature
[Ref.: #8819]	growth	30 °C
[Ref.: #18746]	optimum	28 °C
[Ref.: #37340]	growth	30 °C
[Ref.: #44732]	growth	22-30 °C
[Ref.: #67770]	growth	28 °C

[Ref.: #8819]	Temperature range	mesophilic
[Ref.: #18746]	Temperature range	mesophilic
[Ref.: #37340]	Temperature range	mesophilic
[Ref.: #67770]	Temperature range	mesophilic

Information on physiology and metabolism Physiology and metabolism

[Ref.: #44732]

Oxygen tolerance

aerobe

[Ref.: #20216]

Name of produced compound

Putrescine oxidase

[Ref.: #8819]	Murein short key	A11.07
[Ref.: #8819]	Murein types	A3alpha L-Lys-L-Ala₄

[Ref.: #67770]

Observation

quinones: MK-8(H₂)

	Metabolite	Utilization activity	Kind of utilization tested
[Ref.: #68375]	arabinose ChEBI	-	fermentation	* from API ID32STA
[Ref.: #68368]	arginine ChEBI	+	hydrolysis	* from API 20E
[Ref.: #68375]	arginine ChEBI	-	hydrolysis	* from API ID32STA
[Ref.: #68375]	cellobiose ChEBI	-	fermentation	* from API ID32STA
[Ref.: #68368]	citrate ChEBI	-	assimilation	* from API 20E
[Ref.: #68375]	D-fructose ChEBI	-	fermentation	* from API ID32STA
[Ref.: #68375]	D-glucose ChEBI	-	fermentation	* from API ID32STA, API Coryne
[Ref.: #68375]	D-mannitol ChEBI	-	fermentation	* from API ID32STA, API Coryne
[Ref.: #68375]	D-mannose ChEBI	-	fermentation	* from API ID32STA
[Ref.: #68375]	D-ribose ChEBI	-	fermentation	* from API ID32STA, API Coryne
[Ref.: #68379]	D-xylose ChEBI	-	fermentation	* from API Coryne
[Ref.: #68375]	esculin ChEBI	+	hydrolysis	* from API ID32STA, API Coryne
[Ref.: #68379]	gelatin ChEBI	-	hydrolysis	* from API Coryne, API 20E
[Ref.: #68379]	glycogen ChEBI	-	fermentation	* from API Coryne
[Ref.: #68375]	lactose ChEBI	-	fermentation	* from API ID32STA, API Coryne
[Ref.: #68368]	lysine ChEBI	+	degradation	* from API 20E
[Ref.: #68375]	maltose ChEBI	-	fermentation	* from API ID32STA, API Coryne
[Ref.: #68375]	N-acetylglucosamine ChEBI	-	fermentation	* from API ID32STA
[Ref.: #68375]	nitrate ChEBI	+	reduction	* from API ID32STA
[Ref.: #68379]	nitrate ChEBI	-	reduction	* from API Coryne
[Ref.: #68368]	ornithine ChEBI	+	degradation	* from API 20E
[Ref.: #68375]	ornithine ChEBI	-	degradation	* from API ID32STA
[Ref.: #68375]	raffinose ChEBI	-	fermentation	* from API ID32STA
[Ref.: #68379]	sucrose ChEBI	+	fermentation	* from API Coryne
[Ref.: #68375]	sucrose ChEBI	-	fermentation	* from API ID32STA
[Ref.: #68375]	trehalose ChEBI	-	fermentation	* from API ID32STA
[Ref.: #68368]	tryptophan ChEBI	-	energy source	* from API 20E
[Ref.: #68375]	turanose ChEBI	-	fermentation	* from API ID32STA
[Ref.: #68368]	urea ChEBI	+	hydrolysis	* from API 20E
[Ref.: #68375]	urea ChEBI	-	hydrolysis	* from API ID32STA, API Coryne
	Only first 10 entries are displayed. Click here to see all.

	Antibiotica	Metabolite	Antibiotic sensitivity	Concentration
[Ref.: #68375]		novobiocin ChEBI	yes	1.8	µg	* from API ID32STA

	Metabolite
[Ref.: #68375]	acetoin ChEBI	* from API ID32STA, API 20E
[Ref.: #68368]	hydrogen sulfide ChEBI	* from API 20E
[Ref.: #68368]	indole ChEBI	* from API 20E

	Physiological tests	Metabolite	Voges-Proskauer-test	Indole test
[Ref.: #68375]		acetoin ChEBI	-		* from API ID32STA, API 20E
[Ref.: #68368]		indole ChEBI		-	* from API 20E

	Enzyme	Enzyme activity	EC number
[Ref.: #68382]	acid phosphatase	-	3.1.3.2	* from API zym
[Ref.: #68382]	alkaline phosphatase	+	3.1.3.1	* from API zym
[Ref.: #68375]	alkaline phosphatase	-	3.1.3.1	* from API ID32STA, API Coryne
[Ref.: #68382]	alpha-chymotrypsin	-	3.4.21.1	* from API zym
[Ref.: #68382]	alpha-fucosidase	-	3.2.1.51	* from API zym
[Ref.: #68382]	alpha-galactosidase	-	3.2.1.22	* from API zym
[Ref.: #68379]	alpha-glucosidase	+	3.2.1.20	* from API Coryne, API zym
[Ref.: #68382]	alpha-mannosidase	-	3.2.1.24	* from API zym
[Ref.: #68368]	arginine dihydrolase	+	3.5.3.6	* from API 20E
[Ref.: #68375]	arginine dihydrolase	-	3.5.3.6	* from API ID32STA
[Ref.: #68368]	beta-galactosidase	+	3.2.1.23	* from API 20E
[Ref.: #68375]	beta-galactosidase	-	3.2.1.23	* from API ID32STA, API Coryne, API zym
[Ref.: #68375]	beta-glucosidase	+	3.2.1.21	* from API ID32STA, API Coryne, API zym
[Ref.: #68375]	beta-glucuronidase	-	3.2.1.31	* from API ID32STA, API Coryne, API zym
[Ref.: #68382]	cystine arylamidase	+	3.4.11.3	* from API zym
[Ref.: #68382]	esterase (C 4)	-		* from API zym
[Ref.: #68382]	esterase lipase (C 8)	+		* from API zym
[Ref.: #68379]	gelatinase	-		* from API Coryne, API 20E
[Ref.: #68375]	L-arginine arylamidase	+		* from API ID32STA
[Ref.: #68382]	leucine arylamidase	+	3.4.11.1	* from API zym
[Ref.: #68382]	lipase (C 14)	-		* from API zym
[Ref.: #68368]	lysine decarboxylase	+	4.1.1.18	* from API 20E
[Ref.: #68379]	N-acetyl-beta-glucosaminidase	-	3.2.1.52	* from API Coryne, API zym
[Ref.: #68382]	naphthol-AS-BI-phosphohydrolase	-		* from API zym
[Ref.: #68368]	ornithine decarboxylase	+	4.1.1.17	* from API 20E
[Ref.: #68375]	ornithine decarboxylase	-	4.1.1.17	* from API ID32STA
[Ref.: #68379]	pyrazinamidase	-	3.5.1.B15	* from API Coryne
[Ref.: #68379]	pyrrolidonyl arylamidase	+	3.4.19.3	* from API Coryne
[Ref.: #68375]	pyrrolidonyl arylamidase	-	3.4.19.3	* from API ID32STA
[Ref.: #68382]	trypsin	+	3.4.21.4	* from API zym
[Ref.: #68368]	tryptophan deaminase	-	4.1.99.1	* from API 20E
[Ref.: #68368]	urease	+	3.5.1.5	* from API 20E
[Ref.: #68375]	urease	-	3.5.1.5	* from API ID32STA, API Coryne
[Ref.: #68382]	valine arylamidase	+		* from API zym
	Only first 10 entries are displayed. Click here to see all.

API® 20E:

Note that the displayed test results represent raw data and therefore may deviate!

	API ID	beta-GalactosidaseONPG	Arginine dihydrolaseADH (Arg)	Lysine decarboxylaseLDC (Lys)	Ornithine decarboxylaseODC	Citrate utilizationCIT	H2S productionH2S	Urease/urea hydrolysisURE	Tryptophan deaminaseTDA (Trp)	Indole productionIND	Acetoin production (Voges Proskauer test)VP	Gelatinase/gelatin hydrolysisGEL	Fermentation/oxidation of D-glucoseGLU	Fermentation/oxidation of D-mannitolMAN	Fermentation/oxidation of inositolINO	Fermentation/oxidation of sorbitolSor	Fermentation/oxidation of L-rhamnoseRHA	Fermentation/oxidation of sucroseSAC	Fermentation/oxidation of melibioseMEL	Fermentation/oxidation of amygdalinAMY	Fermentation/oxidation of L-arabinoseARA	Cytochrome oxidaseOX	Nitrite productionNO2	Reduction to N2N2	MotilityMOB	Growth on MacConkey mediumMAC	Oxidative catabolisation of D-glucoseOF-O	Fermentation of D-glucoseOF-F
[Ref.: #18746]	230	+	+	+	+	-	-	+	-	-	-	-	not determinedn.d.	not determinedn.d.	not determinedn.d.	not determinedn.d.	not determinedn.d.	not determinedn.d.	not determinedn.d.	not determinedn.d.	not determinedn.d.	not determinedn.d.	not determinedn.d.	not determinedn.d.	not determinedn.d.	not determinedn.d.	not determinedn.d.	not determinedn.d.

API® Coryne:

Note that the displayed test results represent raw data and therefore may deviate!

	API ID	Reduction of nitrateNIT	PyrazinamidasePYZ	Pyrrolidonyl arylamidasePYRA	Alkaline phosphatasePAL	beta-Glucuronidasebeta GUR	beta-Galactosidasebeta GAL	alpha-Glucosidasealpha GLU	N-Acetyl-beta-Glucosidasebeta NAG	Esculin hydrolysis/beta-GlucosidaseESC	Urease/urea hydrolysisURE	Gelatinase/gelatin hydrolysisGEL	Control fermentationControl	Fermentation of D-glucoseGLU	Fermentation of D-riboseRIB	Fermentation of D-xyloseXYL	Fermentation of D-mannitolMAN	Fermentation of maltoseMAL	Fermentation of lactoseLAC	Fermentation of sucroseSAC	Fermentation of glycogenGLYG	CatalaseCAT
[Ref.: #18746]	189	-	-	+	-	-	-	+	-	+	-	-	not determinedn.d.	-	-	-	-	-	-	+	-	not determinedn.d.

API® ID32STA:

Note that the displayed test results represent raw data and therefore may deviate!

	API ID	Urease/urea hydrolysisURE	Arginine dihydrolaseADH (Arg)	Ornithine decarboxylaseODC	Esculin hydrolysisESC	Fermentation of D-glucoseGLU	Fermentation of D-fructoseFRU	Fermentation of D-mannoseMNE	Fermentation of maltoseMAL	Fermentation of lactoseLAC	Fermentation of trehaloseTRE	Fermentation of D-mannitolMAN	Fermentation of raffinoseRAF	Fermentation of D-riboseRIB	Fermentation of cellobioseCEL	Reduction of nitrateNIT	Acetoin production (Voges Proskauer test)VP	beta-Galactosidasebeta GAL	L-arginine arylamidaseArgA	Alkaline phosphatasePAL	Pyrrolidonyl arylamidasePyrA	Novobiocin resistanceNOVO	Fermentation of sucroseSAC	Fermentation of N-acetyl-glucosamineNAG	Fermentation of turanoseTUR	Fermentation of arabinoseARA	beta-Glucuronidasebeta GUR
[Ref.: #8819]	4391	-	-	-	+	-	-	-	-	-	-	-	-	-	-	+	-	-	+	-	-	-	-	-	-	-	-

API® zym:

Note that the displayed test results represent raw data and therefore may deviate!

	API ID	Control	2-naphthyl phosphateAlkaline phosphatase	2-naphthyl butyrateEsterase (C 4)	2-naphtyl caprylateEsterase Lipase (C 8)	2-naphthyl myristateLipase (C 14)	L-leucyl-2-naphthylamideLeucine arylamidase	L-valyl-2-naphthylamideValine arylamidase	L-cystyl-2-naphthylamideCystine arylamidase	N-benzoyl-DL-arginine-2-naphthylamideTrypsin	N-glutaryl-phenylalanine-2-naphthylamidealpha- Chymotrypsin	2-naphthyl phosphateAcid phosphatase	Naphthol-AS-BI-phosphateNaphthol-AS-BI-phosphohydrolase	6-Br-2-naphthyl-alphaD-galactpyranosidealpha- Galactosidase	2-naphthyl-betaD-galactpyranosidebeta- Galactosidase	Naphthol-AS-BI-betaD-glucuronidebeta- Glucuronidase	2-naphthyl-alphaD-glucopyranosidealpha- Glucosidase	6-Br-2-naphthyl-betaD-glucopyranosidebeta- Glucosidase	1-naphthyl-N-acetyl-betaD-glucosaminideN-acetyl-beta- glucosaminidase	6-Br-2-naphthyl-alphaD-mannopyranosidealpha- Mannosidase	2-naphthyl-alphaL-fucopyranosidealpha- Fucosidase
[Ref.: #18746]	318	not determinedn.d.	+	-	+	-	+	+	+	+	-	-	-	-	-	-	+	+	-	-	-

Information on possible application of the strain and its possible interaction with e.g. potential hosts Safety information

[Ref.: #18746]	Biosafety level	1	Risk group (German classification)
[Ref.: #8819]	Biosafety level	1	Risk group (German classification) According to TRBA 466

Information on genomic background e.g. entries in nucleic sequence databass Sequence information

16S Sequence information:

	Sequence accession description	Seq. accession number	Sequence length (bp)	Sequence database	Associated NCBI tax ID
[Ref.: #8819]	M.roseus 16S rRNA gene	X87756	1481	ENA	1275 tax ID

Genome sequence information:

Only first 5 entries are displayed. Click here to see all.

	Sequence accession description	Seq. accession number	Assembly level (bp)	Sequence database	Associated NCBI tax ID
[Ref.: #66792]	Kocuria rosea ATCC 186	GCA_006094695	complete	GenBank	1275 tax ID	*
[Ref.: #66792]	Kocuria rosea DSM 20447	GCA_006717035	contig	GenBank	1275 tax ID	*
[Ref.: #66792]	Kocuria rosea ATCC 186	GCA_003124035	contig	GenBank	1275 tax ID	*
[Ref.: #66792]	Kocuria rosea strain ATCC 186	1275.9	wgs	PATRIC	1275 tax ID	*
[Ref.: #66792]	Kocuria rosea strain ATCC 186	1275.17	complete	PATRIC	1275 tax ID	*
[Ref.: #66792]	Kocuria rosea strain DSM 20447	1275.18	wgs	PATRIC	1275 tax ID	*

[Ref.: #8819]	GC-content	69.0 mol%
[Ref.: #67770]	GC-content	69 mol%	thermal denaturation, midpoint method (Tm)

Availability in culture collections External links

[Ref.: #8819]

Culture collection no.

DSM 20447, ATCC 186, CCM 679, NCTC 7523, CCUG 4312, IAM 1315, IFO 3768, JCM 11614, BCRC 11044, CECT 5052, CECT 52, CIP 71.15, IAM 14818, IMSNU 11063, IMSNU 21322, JCM 7236, KCCM 40158, KCTC 3137, KCTC 3199, KCTC 3488, LMG 14224, NBRC 3768, NCFB 975, NCIMB 11696, NRRL B-2977, PCM 548, VKM Ac-2200, VKM B-1236, VKM B-1823

[Ref.: #20218]

Associated Passport(s) in StrainInfo

37032, 37029, 37037

Literature:

Only first 10 entries are displayed. Click here to see all.

Topic	Title	Authors	Journal	DOI	Year
Phylogeny	Kocuria polaris sp. nov., an orange-pigmented psychrophilic bacterium isolated from an Antarctic cyanobacterial mat sample.	Reddy GSN, Prakash JSS, Prabahar V, Matsumoto GI, Stackebrandt E, Shivaji S	Int J Syst Evol Microbiol	10.1099/ijs.0.02336-0	2003	*
Phylogeny	Kocuria aegyptia sp. nov., a novel actinobacterium isolated from a saline, alkaline desert soil in Egypt.	Li WJ, Zhang YQ, Schumann P, Chen HH, Hozzein WN, Tian XP, Xu LH, Jiang CL	Int J Syst Evol Microbiol	10.1099/ijs.0.63876-0	2006	*
Phylogeny	Kocuria himachalensis sp. nov., an actinobacterium isolated from the Indian Himalayas.	Mayilraj S, Kroppenstedt RM, Suresh K, Saini HS	Int J Syst Evol Microbiol	10.1099/ijs.0.63915-0	2006	*
Phylogeny	Kocuria dechangensis sp. nov., an actinobacterium isolated from saline and alkaline soils.	Wang K, Zhang L, Liu Y, Pan Y, Meng L, Xu T, Zhang C, Liu H, Hong S, Huang H, Jiang J	Int J Syst Evol Microbiol	10.1099/ijs.0.000372	2015	*
Phylogeny	Kocuria subflava sp. nov., isolated from marine sediment from the Indian Ocean.	Jiang Z, Zhang WH, Yuan CG, Chen JY, Cao LX, Park DJ, Xiao M, Kim CJ, Li WJ	Antonie Van Leeuwenhoek	10.1007/s10482-015-0587-z	2015	*
Phylogeny	Kocuria oceani sp. nov., isolated from a deep-sea hydrothermal plume.	Zhang L, Xi L, Ruan J, Huang Y	Int J Syst Evol Microbiol	10.1099/ijsem.0.001599	2017	*
	Radio-resistance in psychrotrophic Kocuria sp. ASB 107 isolated from Ab-e-Siah radioactive spring.	Asgarani E, Soudi MR, Borzooee F, Dabbagh R	J Environ Radioact	10.1016/j.jenvrad.2012.04.009	2012	*
	On-chip cell lysis by antibacterial non-leaching reusable quaternary ammonium monolithic column.	Aly Saad Aly M, Gauthier M, Yeow J	Biomed Microdevices	10.1007/s10544-015-0025-z	2016	*

References

#8819

Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 20447

#18746

Wink, J.: Compendium of Actinobacteria. HZI-Helmholtz-Centre for Infection Research, Braunschweig .

#20215

Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )

#20216

Leibniz-Institut für Naturstoff-Forschung und Infektionsbiologie e. V. Hans-Knöll-Institut (HKI) Curators of the HKI: Collection Description Leibniz-Institut für Naturstoff-Forschung und Infektionsbiologie e. V. Hans-Knöll-Institut (HKI) .

#20218

Verslyppe, B., De Smet, W., De Baets, B., De Vos, P., Dawyndt P.: StrainInfo introduces electronic passports for microorganisms.. Syst Appl Microbiol. 37: 42 - 50 2014 ( DOI 10.1016/j.syapm.2013.11.002 , PubMed 24321274 )

#37340 ; Curators of the CIP;
#44732 Culture Collection University of Gothenburg (CCUG) ; Curators of the CCUG; CCUG 4312

#66792

Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

#67770 Japan Collection of Microorganism (JCM) ; Curators of the JCM;

#68368

Automatically annotated from API 20E .

#68375

Automatically annotated from API ID32STA .

#68379

Automatically annotated from API Coryne .

#68382

Automatically annotated from API zym .

* These data were automatically processed and therefore are not curated

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