Paenarthrobacter ilicis (DSM 20138, ATCC 14264, NCPPB 1228)

Name: Paenarthrobacter ilicis (DSM 20138, ATCC 14264, NCPPB 1228)
Creator: BacDive
License: http://creativecommons.org/licenses/by/4.0/

BacDive ID 7619

Type strain

Strain Designation Cr-2

Culture col. no. DSM 20138 ATCC 14264 NCPPB 1228 CCUG 23889 LMG 3659 14 more

NCBI tax ID(s) 43665

Special Collections DSMZ CCUG JCM CIP Wink compendium

History <- ATCC <- M. Mandel; (Corynebacterium ilicis) CECT 4207 <-- NCPPB 1228 <-- M. Mandel CR2 <-- M. Mandel and E. F. Guba. CIP <- 2001, CCUG <- 1989, LMG <- 1981, NCPPB <- 1962, Mandel: strain Cr-2

Links

Paenarthrobacter ilicis Cr-2 is an obligate aerobe, Gram-positive, motile bacterium that was isolated from american holly .

Gram-positive motile rod-shaped obligate aerobe genome sequence 16S sequence Bacteria

Name and taxonomic classification

SI-ID 1002

LMG 3659,ATCC 14264,DSM 20138,ICMP 2607,ICMP 2608,LMG 7254,NCPPB 1228,PDDCC 2607,PDDCC 2608,CCUG 23889,IFO 15514,VKM Ac-1987,CECT 4207,CFBP 1380,CIP 107004,KCTC 3468,CCM 4967,JCM 12267,NBRC 15514,HAMBI 1849,IAM 14586,CFBP 8879

@ref 20215

Last LPSN update 2026-02-09 11:19:31

Domain Bacteria

Phylum Actinomycetota

Class Actinomycetes

Order Micrococcales

Family Micrococcaceae

Genus Paenarthrobacter

Species Paenarthrobacter ilicis

Full scientific name Paenarthrobacter ilicis (Collins et al. 1982) Busse 2016

Synonyms (1)

Arthrobacter ilicis

Morphology

Cell morphology

@ref	Gram stain	Cell shape	Motility
120047	positive	rod-shaped

Colony morphology

@ref	Colony color	Incubation period	Medium used	Hemolysis ability
18628	Sand yellow (1002)	10-14 days	ISP 2
18628	Zinc yellow (1016)	10-14 days	ISP 3
18628	Colorless	10-14 days	ISP 6
18628	Colorless	10-14 days	ISP 7
120047				1

Multicellular morphology

@ref	Forms multicellular complex	Medium name
18628		ISP 2
18628		ISP 3
18628		ISP 6
18628		ISP 7

Culture and growth conditions

Culture medium

@ref	Name	Medium link	Composition
8563	CORYNEBACTERIUM AGAR (DSMZ Medium 53)	Medium recipe at MediaDive	Name: CORYNEBACTERIUM AGAR (DSMZ Medium 53) Composition: Agar 15.0 g/l Casein peptone 10.0 g/l NaCl 5.0 g/l Glucose 5.0 g/l Yeast extract 5.0 g/l Distilled water
18628	ISP 2		Name: ISP 2 / Yeast Malt Agar (5265); 5265 Composition Malt extract 10.0 g/l Yeast extract 4.0 g/l Glucose 4.0 g/l Agar 15.0 g/l Preparation: Sterilisation: 20 minutes at 121°C pH before sterilisation: 7.0 Usage: Maintenance and Taxonomy Organisms: All Actinomycetes
18628	ISP 3		Name: ISP 3; 5315 Composition Dog oat flakes 20.0 g/l Trace element solution (5314) 2.5 ml/l Agar 18.0 g/l Preparation: Oat flakes are cooked for 20 minutes, trace element solution and agar are added (in the case of non rolled oat flakes the suspension has to bee filtrated). Sterilisation: 20 minutes at 121°C pH before sterilisation: 7.8 Usage: Maintenance and taxonomy (e.g. SEM As liquid medium for metabolite production) Organisms: All Actinomycetes Trace element solution 5314 Name: Trace element solution 5314; 5314 Composition CaCl2 x H2O 3.0 g/l Fe-III-citrate 1.0 g/l MnSO4 0.2 g/l ZnCl2 0.1 g/l CuSO4 x 5 H2O 0.025 g/l Sodium tetra borate 0.2 g/l CoCl2 x 6 H2O 0.004 g/l Sodium molybdate 0.01 g/l Preparation: Use double destillated water. Sterilisation: 20 minutes at 121°C pH before sterilisation: Usage: Trace element solution for different media Organisms:
18628	ISP 6		Name: ISP 6 (5318) Composition Peptone 15.0 g/l Proteose peptose 5.0 g/l Ferric ammonium citrate 0.5 g/l Sodium glycerophosphate 1.0 g/l Sodium thiosulfate 0.08 g/l Yeast extract 1.0 g/l Agar 15.0 g/l Sterilisation: 20 minutes at 121°C pH before sterilisation: Usage: Production of melanoid pigments Organisms: All Actinomycetes
18628	ISP 7		Name: ISP 7 (5322) Composition Glycerol 15.0 g/l L-Tyrosine 0.5 g/l L-Asparagine 1.0 g/l K2HPO4 0.5 g/l NaCl 0.5 g/l FeSO4 x 7 H2O 0.01 g/l Trace element solution 5343 1.0 ml/l Agar 20.0 Sterilisation: 20 minutes at 121°C pH before sterilisation: 7.3 Usage: Production of melanoid pigments Organisms: All Actinomycetes
41900	MEDIUM 72- for trypto casein soja agar		Distilled water make up to (1000.000 ml);Trypto casein soy agar (40.000 g)
120047	CIP Medium 72	Medium recipe at CIP

Culture temp

@ref	Growth	Type	Temperature (°C)
8563	positive	growth	30
18628	positive	optimum	28
41900	positive	growth	30
67770	positive	growth	28
120047	positive	growth	10-37
120047	negative	growth	41
120047	negative	growth	45

Physiology and metabolism

Oxygen tolerance

@ref	Oxygen tolerance	Confidence
120047	obligate aerobe
125439	obligate aerobe	97.4

Halophily

@ref	Salt	Growth	Tested relation	Concentration
18628	NaCl	positive	maximum	5 %
120047	NaCl	positive	growth	0-4 %
120047	NaCl		growth	6 %
120047	NaCl		growth	8 %
120047	NaCl		growth	10 %

Murein

@ref	Murein short key	Type
8563	A11.17	A3alpha L-Lys-L-Ala-L-Thr-L-Ala

Observation

67770

Observationquinones: MK-9(H₂)

Metabolite utilization

@ref	Chebi-ID	Metabolite	Utilization activity	Kind of utilization tested
68368	29016 ChEBI	arginine	+	hydrolysis	from API 20E
120047	16947 ChEBI	citrate	-	carbon source
68368	16947 ChEBI	citrate	+	assimilation	from API 20E
68379	17634 ChEBI	D-glucose	+	fermentation	from API Coryne
68379	16899 ChEBI	D-mannitol	-	fermentation	from API Coryne
68379	16988 ChEBI	D-ribose	+	fermentation	from API Coryne
68379	65327 ChEBI	D-xylose	-	fermentation	from API Coryne
68379	4853 ChEBI	esculin	+	hydrolysis	from API Coryne
120047	4853 ChEBI	esculin	+	hydrolysis
68379	5291 ChEBI	gelatin	+	hydrolysis	from API Coryne
68368	5291 ChEBI	gelatin	-	hydrolysis	from API 20E
68379	28087 ChEBI	glycogen	-	fermentation	from API Coryne
120047	606565 ChEBI	hippurate	+	hydrolysis
68379	17716 ChEBI	lactose	+	fermentation	from API Coryne
68368	25094 ChEBI	lysine	+	degradation	from API 20E
68379	17306 ChEBI	maltose	+	fermentation	from API Coryne
68379	17632 ChEBI	nitrate	+	reduction	from API Coryne
120047	17632 ChEBI	nitrate	-	reduction
120047	17632 ChEBI	nitrate	-	respiration
120047	16301 ChEBI	nitrite	-	reduction
68368	18257 ChEBI	ornithine	-	degradation	from API 20E
68379	17992 ChEBI	sucrose	+	fermentation	from API Coryne
68368	27897 ChEBI	tryptophan	-	energy source	from API 20E
68379	16199 ChEBI	urea	+	hydrolysis	from API Coryne
68368	16199 ChEBI	urea	+	hydrolysis	from API 20E

Antibiotic resistance

@ref	Metabolite	Is sensitive	Is resistant
120047	0129 (2,4-Diamino-6,7-di-iso-propylpteridine phosphate)

Metabolite production

@ref	Chebi-ID	Metabolite
68368	15688 ChEBI	acetoin	from API 20E
68368	16136 ChEBI	hydrogen sulfide	from API 20E
120047	35581 ChEBI	indole
68368	35581 ChEBI	indole	from API 20E

Metabolite tests

@ref	Chebi-ID	Metabolite	Voges-proskauer-test	Methylred-test	Indole test
120047	15688 ChEBI	acetoin	-
68368	15688 ChEBI	acetoin	-			from API 20E
120047	17234 ChEBI	glucose		-
68368	35581 ChEBI	indole			-	from API 20E

Enzymes

@ref	Value	Activity	Ec
68382	acid phosphatase	+	3.1.3.2	from API zym
120047	alcohol dehydrogenase	-	1.1.1.1
68382	alkaline phosphatase	+	3.1.3.1	from API zym
68379	alkaline phosphatase	-	3.1.3.1	from API Coryne
68382	alpha-chymotrypsin	-	3.4.21.1	from API zym
68382	alpha-fucosidase	-	3.2.1.51	from API zym
68382	alpha-galactosidase	+	3.2.1.22	from API zym
68379	alpha-glucosidase	+	3.2.1.20	from API Coryne
68382	alpha-mannosidase	+	3.2.1.24	from API zym
120047	amylase	-
68368	arginine dihydrolase	+	3.5.3.6	from API 20E
68382	beta-galactosidase	+	3.2.1.23	from API zym
120047	beta-galactosidase	+	3.2.1.23
68379	beta-galactosidase	+	3.2.1.23	from API Coryne
68368	beta-galactosidase	+	3.2.1.23	from API 20E
68382	beta-glucosidase	+	3.2.1.21	from API zym
68379	beta-glucosidase	+	3.2.1.21	from API Coryne
68379	beta-glucuronidase	+	3.2.1.31	from API Coryne
120047	caseinase	+	3.4.21.50
120047	catalase	+	1.11.1.6
120047	DNase	+
68382	esterase (C 4)	+		from API zym
68382	esterase lipase (C 8)	+		from API zym
120047	gamma-glutamyltransferase	+	2.3.2.2
120047	gelatinase	+
68379	gelatinase	+		from API Coryne
68368	gelatinase	-		from API 20E
120047	lecithinase	-
68382	leucine arylamidase	+	3.4.11.1	from API zym
120047	lipase	-
68382	lipase (C 14)	-		from API zym
120047	lysine decarboxylase	-	4.1.1.18
68368	lysine decarboxylase	+	4.1.1.18	from API 20E
68382	N-acetyl-beta-glucosaminidase	+	3.2.1.52	from API zym
68379	N-acetyl-beta-glucosaminidase	+	3.2.1.52	from API Coryne
68382	naphthol-AS-BI-phosphohydrolase	+		from API zym
120047	ornithine decarboxylase	-	4.1.1.17
68368	ornithine decarboxylase	-	4.1.1.17	from API 20E
120047	oxidase	-
120047	phenylalanine ammonia-lyase	-	4.3.1.24
120047	protease	+
68379	pyrazinamidase	+	3.5.1.B15	from API Coryne
68379	pyrrolidonyl arylamidase	+	3.4.19.3	from API Coryne
68382	trypsin	+	3.4.21.4	from API zym
120047	tryptophan deaminase	-
68368	tryptophan deaminase	+	4.1.99.1	from API 20E
120047	tween esterase	-
120047	urease	-	3.5.1.5
68379	urease	+	3.5.1.5	from API Coryne
68368	urease	+	3.5.1.5	from API 20E

API 20E

@ref	ONPG	ADH (Arg)	LDC (Lys)	ODC	CIT	H2S productionH2S	URE	TDA (Trp)	IND	Acetoin production (Voges Proskauer test)VP	GEL	GLU	MAN	INO	Sor	RHA	SAC	MEL	AMY	ARA	OX	Nitrite productionNO2	Reduction to N2N2	MotilityMOB	Growth on MacConkey mediumMAC	OF-O	OF-F
18628	+	+	+	-	+	+	+	+	-	-	-	not determinedn.d.	not determinedn.d.	not determinedn.d.	not determinedn.d.	not determinedn.d.	not determinedn.d.	not determinedn.d.	not determinedn.d.	not determinedn.d.	not determinedn.d.	not determinedn.d.	not determinedn.d.	not determinedn.d.	not determinedn.d.	not determinedn.d.	not determinedn.d.

API coryne

@ref	Reduction of nitrateNIT	PYZ	PYRA	PAL	beta GUR	beta GAL	alpha GLU	beta NAG	ESC	URE	GEL	Control fermentationControl	GLU	RIB	XYL	MAN	MAL	LAC	SAC	GLYG	CAT
18628	+	+	+	-	+	+	+	+	+	+	+	not determinedn.d.	+	+	-	-	+	+	+	-	not determinedn.d.

API zym

@ref	Control	Alkaline phosphatase	Esterase (C 4)	2-naphtyl caprylateEsterase Lipase (C 8)	Lipase (C 14)	L-leucyl-2-naphthylamideLeucine arylamidase	L-valyl-2-naphthylamideValine arylamidase	L-cystyl-2-naphthylamideCystine arylamidase	Trypsin	alpha- Chymotrypsin	Acid phosphatase	Naphthol-AS-BI-phosphateNaphthol-AS-BI-phosphohydrolase	alpha- Galactosidase	beta- Galactosidase	beta- Glucuronidase	alpha- Glucosidase	beta- Glucosidase	N-acetyl-beta- glucosaminidase	alpha- Mannosidase	alpha- Fucosidase
18628	not determinedn.d.	+	+	+	-	+	+	+	+	-	+	+	+	+	-	-	+	+	+	-
120047	-	+	+	+	-	+	-	-	+	-	+	+	+	+	+	+	+	+	+	-

API biotype100

@ref	ControlQ	D-glucose as carbon sourceGLU	D-fructose as carbon sourceFRU	D-galactose as carbon sourceGAL	D-trehalose as carbon sourceTRE	D-mannose as carbon sourceMNE	L-sorbose as carbon sourceSBE	D-melibiose as carbon sourceMEL	sucrose as carbon sourceSAC	D-raffinose as carbon sourceRAF	maltotriose as carbon sourceMTE	maltose as carbon sourceMAL	lactose as carbon sourceLAC	lactulose as carbon sourceLTE	1-O-methyl-beta-galactopyranoside as carbon sourceMbGa	1-O-methyl-alpha-galactopyranoside as carbon sourceMaGa	D-cellobiose as carbon sourceCEL	gentiobiose as carbon sourceGEN	1-O-methyl-beta-D-glucopyranoside as carbon sourceMbGu	esculin as carbon sourceESC	D-ribose as carbon sourceRIB	L-arabinose as carbon sourceARA	D-xylose as carbon sourceXYL	palatinose as carbon sourcePLE	L-rhamnose as carbon sourceRHA	L-fucose as carbon sourceFUC	D-melezitose as carbon sourceMLZ	D-arabitol as carbon sourceDARL	L-arabitol as carbon sourceLARL	xylitol as carbon sourceXLT	dulcitol as carbon sourceDUL	D-tagatose as carbon sourceTAG	glycerol as carbon sourceGLY	myo-inositol as carbon sourceINO	D-mannitol as carbon sourceMAN	maltitol as carbon sourceMTL	D-turanose as carbon sourceTUR	D-sorbitol as carbon sourceSOR	adonitol as carbon sourceADO	hydroxyquinoline-beta-glucuronide as carbon sourceHBG	D-lyxose as carbon sourceLYX	i-erythritol as carbon sourceERY	1-O-methyl-alpha-D-glucoside as carbon sourceMDG	3-O-methyl-D-glucose as carbon source3MDG	D-saccharate as carbon sourceSAT	mucate as carbon sourceMUC	L-tartrate as carbon sourceLTAT	D-tartrate as carbon sourceDTAT	meso-tartrate as carbon sourceMTAT	D-malate as carbon sourceDMLT	L-malate as carbon sourceLMLT	cis-aconitate as carbon sourceCATE	trans-aconitate as carbon sourceTATE	tricarballylate as carbon sourceTTE	citrate as carbon sourceCIT	D-glucuronate as carbon sourceGRT	D-galacturonate as carbon sourceGAT	2-ketogluconate as carbon source2KG	5-ketogluconate as carbon source5KG	tryptophan as carbon sourceTRY	N-acetyl-D-glucosamine as carbon sourceNAG	D-gluconate as carbon sourceGNT	phenylacetate as carbon sourcePAC	protocatechuate as carbon sourcePAT	4-hydroxybenzoate as carbon sourcepOBE	quinate as carbon sourceQAT	gentisate as carbon sourceGTE	3-hydroxybenzoate as carbon sourcemOBE	benzoate as carbon sourceBAT	3-phenylpropionate as carbon sourcePPAT	m-coumarate as carbon sourceCMT	trigonelline as carbon sourceTGE	betaine as carbon sourceBET	putrescine as carbon sourcePCE	4-aminobutyrate as carbon sourceABT	histamine as carbon sourceHIN	DL-lactate as carbon sourceLAT	caprate as carbon sourceCAP	caprylate as carbon sourceCYT	L-histidine as carbon sourceHIS	succinate as carbon sourceSUC	fumarate as carbon sourceFUM	glutarate as carbon sourceGRE	DL-glycerate as carbon sourceGYT	5-aminovalerate as carbon sourceAVT	ethanolamine as carbon sourceETN	tryptamine as carbon sourceTTN	D-glucosamine as carbon sourceGLN	itaconate as carbon sourceITA	3-hydroxybutyrate as carbon source3OBU	L-aspartate as carbon sourceAPT	L-glutamate as carbon sourceGTT	L-proline as carbon sourcePRO	D-alanine as carbon sourceDALA	L-alanine as carbon sourceLALA	L-serine as carbon sourceSER	malonate as carbon sourceMNT	propionate as carbon sourcePROP	L-tyrosine as carbon sourceTYR	2-ketoglutarate as carbon source2KT
120047	not determinedn.d.	+	+	+	+	+	-	+	+	+	+	+	+	+	+	+	+	+	+	+	-	+	+	+	-	-	+	-	-	+	-	-	+	+	+	+	+	-	-	-	-	-	+	-	-	-	-	-	-	-	+	+	+	-	+	+	-	+	-	-	+	+	+	+	+	+	-	+	-	-	+	-	+	+	+	-	+	-	-	-	+	+	-	-	-	-	-	+	-	+	+	+	+	+	+	+	-	+	+	-

Isolation, sampling and environmental information

Isolation source categories

Cat1	Cat2	Cat3
#Host	#Plants	#Tree

Isolation

@ref	Sample type	Country	Country ISO 3 Code	Continent	Isolation date	Host species
8563	american holly (Ilex opaca)					Ilex opaca
47870	Ilex poaca	USA	USA	North America
67770	American holly (Ilex opaca)					Ilex opaca
120047	American holly, Ilex opaca	United States of America	USA	North America	1989

Interaction and safety

Risk assessment

@ref	Biosafety level	Biosafety level comment
8563	1	Risk group (German classification) According to TRBA 466
18628	1	Hazard group According to TRBA 466
120047	1	Risk group (French classification) According to TRBA 466

Sequence information

Genome sequences

@ref	Description	Assembly level	INSDC accession	BV-BRC accession	IMG accession	NCBI tax ID	Score
66792	ASM1690754v1 assembly for Paenarthrobacter ilicis DSM 20138	contig	GCA_016907545	43665.6	2893582668	43665	79.26
67770	ASM1176131v1 assembly for Paenarthrobacter ilicis CECT 4207	scaffold	GCA_011761315	43665.5	2824339274	43665	74.64
124043	ASM3953456v1 assembly for Paenarthrobacter ilicis JCM 12267	scaffold	GCA_039534565			43665	64.83

16S sequences

@ref	Description	Accession	Length	Database	NCBI tax ID
8563	A.ilicis 16S rRNA gene	X83407	1486		43665
124043	Arthrobacter ilicis partial 16S rRNA gene, type strain CECT 4207T	FR870442	1460		43665

GC content

@ref	GC-content (mol%)	Method
8563	61.5
67770	61.5	thermal denaturation, midpoint method (Tm)

Genome-based predictions

Predictions

Predictions from Deep Learning for Genome Sequence Data. R package version 0.3.1 based on: Paenarthrobacter ilicis CECT 4207
NCBI: GCA_011761315

@ref	Trait	Model	Prediction	Confidence in %	In training data
125439	spore_formation	BacteriaNetⓘ	no	79.40	no
125439	motility	BacteriaNetⓘ	no	83.20	no
125439	gram_stain	BacteriaNetⓘ	positive	85.30	no
125439	oxygen_tolerance	BacteriaNetⓘ	obligate aerobe	97.40	no

Predictions from bacterial phenotypic traits through improved machine learning using high-quality, curated datasets based on: Paenarthrobacter ilicis strain CECT 4207
PATRIC: 43665.5

@ref	Trait	Model	Prediction	Confidence in %	In training data
125438	gram-positive	gram-positiveⓘ	yes	89.79	no
125438	anaerobic	anaerobicⓘ	no	97.62	yes
125438	spore-forming	spore-formingⓘ	no	58.72	no
125438	aerobic	aerobicⓘ	yes	89.28	yes
125438	thermophilic	thermophileⓘ	no	99.00	yes
125438	flagellated	motile2+ⓘ	no	73.00	no

Literature

Topic	Title	Authors	Journal	DOI	Year
	Paenarthrobacter sp. GOM3 Is a Novel Marine Species With Monoaromatic Degradation Relevance.	Rosas-Diaz J, Escobar-Zepeda A, Adaya L, Rojas-Vargas J, Cuervo-Amaya DH, Sanchez-Reyes A, Pardo-Lopez L.	Front Microbiol	10.3389/fmicb.2021.713702	2021
	Distribution and diversity of olefins and olefin-biosynthesis genes in Gram-positive bacteria.	Surger M, Angelov A, Liebl W.	Biotechnol Biofuels	10.1186/s13068-020-01706-y	2020
	Two new psychrotolerant Massilia species inhibit plant pathogens Clavibacter and Curtobacterium.	Sedlacek I, Holochova P, Sedlar K, Stankova E, Sedo O, Kralova S, Umair M, Koublova V, Svec P.	Sci Rep	10.1038/s41598-025-09734-0	2025
Phylogeny	Corynebacterium ilicis is typified by ICMP 2608 =ICPB CI144, Arthrobacter ilicis is typified by DSM 20138 =ATCC 14264 =NCPPB 1228 and the two are not homotypic synonyms, and clarification of the authorship of these two species. Opinion 87.		Int J Syst Evol Microbiol	10.1099/ijs.0.2008/006221-0	2008
Phylogeny	Paenarthrobacter aromaticivorans sp. nov., a paraoxon-degrading bacterium isolated from red pepper cultivation soil.	Oh ET, Jeong JW, Kim SB.	Int J Syst Evol Microbiol	10.1099/ijsem.0.006389	2024

References

#8563	Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 20138
#18628	Wink, J.: Compendium of Actinobacteria. HZI-Helmholtz-Centre for Infection Research, Braunschweig .
#20215	Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )
#41900	; Curators of the CIP;
#47870	Culture Collection University of Gothenburg (CCUG) ; Curators of the CCUG; CCUG 23889
#66792	Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .
#67770	Japan Collection of Microorganism (JCM) ; Curators of the JCM;
#68368	Automatically annotated from API 20E .
#68379	Automatically annotated from API Coryne .
#68382	Automatically annotated from API zym .
#120047	Collection of Institut Pasteur ; Curators of the CIP; CIP 107004
#124043	Isabel Schober, Julia Koblitz: Data extracted from sequence databases, automatically matched based on designation and taxonomy .
#125438	Julia Koblitz, Lorenz Christian Reimer, Rüdiger Pukall, Jörg Overmann: Predicting bacterial phenotypic traits through improved machine learning using high-quality, curated datasets. 2024 ( DOI 10.1101/2024.08.12.607695 )
#125439	Philipp Münch, René Mreches, Martin Binder, Hüseyin Anil Gündüz, Xiao-Yin To, Alice McHardy: deepG: Deep Learning for Genome Sequence Data. R package version 0.3.1 .
#126262	A. Lissin, I. Schober, J. F. Witte, H. Lüken, A. Podstawka, J. Koblitz, B. Bunk, P. Dawyndt, P. Vandamme, P. de Vos, J. Overmann, L. C. Reimer: StrainInfo—the central database for linked microbial strain identifiers. ( DOI 10.1093/database/baaf059 )

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Paenarthrobacter ilicis (DSM 20138, ATCC 14264, NCPPB 1228)

Name and taxonomic classification

Morphology

Cell morphology

Colony morphology

Multicellular morphology

Culture and growth conditions

Culture medium

Culture temp

Physiology and metabolism

Oxygen tolerance

Halophily

Murein

Observation

Metabolite utilization

Antibiotic resistance

Metabolite production

Metabolite tests

Enzymes

API 20E

API coryne

API zym

API biotype100

Isolation, sampling and environmental information

Isolation source categories

Isolation

Interaction and safety

Risk assessment

Sequence information

Genome sequences

Genome browser: GCA_016907545

16S sequences

GC content

Genome-based predictions

Predictions

Literature

Literature

References

BacDive

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