Muricoccus aerilatus (DSM 19363, KACC 12521, 5420S-30)

Name: Muricoccus aerilatus (DSM 19363, KACC 12521, 5420S-30)
Creator: BacDive
License: http://creativecommons.org/licenses/by/4.0/

BacDive ID 76

Type strain

Strain Designation 5420S-30

Culture col. no. DSM 19363 KACC 12521 5420S-30 UCCCB24 CIP 110193

NCBI tax ID(s) 1123060 452982

Special Collections DSMZ Literature strains CIP UCCCB

History 2010, KACC <- S.-W. Kwon, KACC; 5420S-30 <- H.-Y. Weon, Natl. Inst. Agricult. Sci. and Technol., Suwon, Korea Kwon S.-W., Korean Agricultural Culture Collection; 5420S-30 < Weon H.-Y., National Institute of Agricultural Science and Technology CIP <- 2010, KACC: strain 5420S-30 <- H.-Y. Weon, Natl. Inst. Agricult. Sci. and Technol., Suwon, South Korea

Links

Muricoccus aerilatus 5420S-30 is an obligate aerobe, Gram-negative, coccus-shaped bacterium that forms circular colonies and was isolated from air.

Gram-negative coccus-shaped colony-forming obligate aerobe genome sequence 16S sequence Bacteria

Name and taxonomic classification

SI-ID 354323

DSM 19363,KACC 12521,CIP 110193

@ref 20215

Last LPSN update 2026-02-09 11:17:47

Domain Bacteria

Phylum Pseudomonadota

Class Alphaproteobacteria

Order Rhodospirillales

Family Acetobacteraceae

Genus Muricoccus

Species Muricoccus aerilatus

Full scientific name Muricoccus aerilatus (Yoo et al. 2008) Liu and Xin 2025

Synonyms (2)

Pararoseomonas aerilata
Roseomonas aerilata

Morphology

Cell morphology

@ref	Gram stain	Cell length	Cell shape	Confidence
22961	negative	1.2-1.5 µm	coccus-shaped
116059	negative		coccus-shaped
125438	negative			95.81

Colony morphology

@ref	Colony color	Colony shape
22961	pink	circular

Culture and growth conditions

Culture medium

@ref	Name	Medium link	Composition
8074	R2A MEDIUM (DSMZ Medium 830)	Medium recipe at MediaDive	Name: R2A MEDIUM (DSMZ Medium 830) Composition: Agar 15.0 g/l Casamino acids 0.5 g/l Starch 0.5 g/l Glucose 0.5 g/l Proteose peptone 0.5 g/l Yeast extract 0.5 g/l K2HPO4 0.3 g/l Na-pyruvate 0.3 g/l MgSO4 x 7 H2O 0.05 g/l Distilled water
22961	Nutrient agar (NA)
22961	Reasoner's 2A agar (R2A)
40348	MEDIUM 566- Reasoner's 2A agar for Flavobacterium micromati		Distilled water make up to (1000.000 ml);R2A agar (18.200 g)
116059	CIP Medium 566	Medium recipe at CIP

Culture temp

@ref	Growth	Type	Temperature (°C)
8074	positive	growth	30
22961	positive	growth	5.0-35.0
22961	positive	optimum	30.0
40348	positive	growth	30
67772	positive	minimum	5
67772	positive	optimum	30
67772	positive	maximum	35

Culture pH

@ref	Ability	Type	PH	PH range
67772	positive	maximum	9.0
67772	positive	minimum	5.0
22961	positive	optimum	6.0-7.0
67772	positive	optimum	6.0-7.0
22961	positive	growth	5.0-9.0	alkaliphile

Physiology and metabolism

Oxygen tolerance

@ref	Oxygen tolerance	Confidence
22961	obligate aerobe
116059	obligate aerobe
125439	aerobe	91.8

Halophily

@ref	Salt	Growth	Tested relation	Concentration
22961	NaCl		growth	>1.0 %

Metabolite utilization

@ref	Chebi-ID	Metabolite	Utilization activity	Kind of utilization tested
22961	16808 ChEBI	2-dehydro-D-gluconate	-	builds acid from
22961	16193 ChEBI	3-hydroxybenzoate	+	growth
22961	37054 ChEBI	3-hydroxybutyrate	+	growth
22961	17426 ChEBI	5-dehydro-D-gluconate	-	builds acid from
22961	17128 ChEBI	adipate	-	growth
22961	27613 ChEBI	amygdalin	-	builds acid from
22961	18305 ChEBI	arbutin	-	builds acid from
22961	29016 ChEBI	arginine	-	carbon source
22961	85146 ChEBI	carboxymethylcellulose	-	degradation
22961		casein	-	degradation
22961	17057 ChEBI	cellobiose	-	builds acid from
22961	17029 ChEBI	chitin	-	degradation
22961	17108 ChEBI	D-arabinose	-	builds acid from
22961	18333 ChEBI	D-arabitol	-	builds acid from
22961	15824 ChEBI	D-fructose	-	builds acid from
22961	28847 ChEBI	D-fucose	-	builds acid from
22961	12936 ChEBI	D-galactose	-	builds acid from
22961	17634 ChEBI	D-glucose	-	builds acid from
22961	17634 ChEBI	D-glucose	-	growth
22961	62318 ChEBI	D-lyxose	-	builds acid from
22961	16899 ChEBI	D-mannitol	-	builds acid from
22961	16899 ChEBI	D-mannitol	-	growth
22961	16024 ChEBI	D-mannose	-	builds acid from
22961	16024 ChEBI	D-mannose	-	growth
22961	16988 ChEBI	D-ribose	-	builds acid from
22961	17924 ChEBI	D-sorbitol	-	builds acid from
22961	16443 ChEBI	D-tagatose	-	builds acid from
22961	16551 ChEBI	D-trehalose	-	builds acid from
22961	65327 ChEBI	D-xylose	-	builds acid from
22961	27689 ChEBI	decanoate	-	growth
22961	16991 ChEBI	dna	-	degradation
22961	17113 ChEBI	erythritol	-	builds acid from
22961	4853 ChEBI	esculin	-	builds acid from
22961	4853 ChEBI	esculin	-	hydrolysis
22961	16813 ChEBI	galactitol	-	builds acid from
22961	5291 ChEBI	gelatin	-	hydrolysis
22961	28066 ChEBI	gentiobiose	-	builds acid from
22961	24265 ChEBI	gluconate	-	builds acid from
22961	17234 ChEBI	glucose	-	fermentation
22961	24297 ChEBI	glucuronate	-	growth
22961	17754 ChEBI	glycerol	-	builds acid from
22961	28087 ChEBI	glycogen	-	builds acid from
22961	17368 ChEBI	hypoxanthine	-	degradation
22961	15443 ChEBI	inulin	-	builds acid from
22961	30849 ChEBI	L-arabinose	-	builds acid from
22961	30849 ChEBI	L-arabinose	-	growth
22961	18403 ChEBI	L-arabitol	-	builds acid from
22961	18287 ChEBI	L-fucose	-	builds acid from
22961	62345 ChEBI	L-rhamnose	-	builds acid from
22961	17266 ChEBI	L-sorbose	-	builds acid from
22961	65328 ChEBI	L-xylose	-	builds acid from
22961	17716 ChEBI	lactose	-	builds acid from
22961	25115 ChEBI	malate	-	growth
22961	17306 ChEBI	maltose	-	builds acid from
22961	17306 ChEBI	maltose	-	growth
22961	6731 ChEBI	melezitose	-	builds acid from
22961	28053 ChEBI	melibiose	-	builds acid from
22961	320061 ChEBI	methyl alpha-D-glucopyranoside	-	builds acid from
22961	43943 ChEBI	methyl alpha-D-mannoside	-	builds acid from
22961	74863 ChEBI	methyl beta-D-xylopyranoside	-	builds acid from
22961	17268 ChEBI	myo-inositol	-	builds acid from
22961	506227 ChEBI	N-acetylglucosamine	-	builds acid from
22961	506227 ChEBI	N-acetylglucosamine	-	growth
22961	17632 ChEBI	nitrate	-	reduction
116059	17632 ChEBI	nitrate	-	reduction
116059	16301 ChEBI	nitrite	-	reduction
22961	17309 ChEBI	pectin	-	degradation
22961	18401 ChEBI	phenylacetate	-	growth
22961	16634 ChEBI	raffinose	-	builds acid from
22961	15963 ChEBI	ribitol	-	builds acid from
22961	17814 ChEBI	salicin	-	builds acid from
22961	53258 ChEBI	sodium citrate	-	growth
22961	28017 ChEBI	starch	-	builds acid from
22961	28017 ChEBI	starch	-	degradation
22961	9300 ChEBI	suberic acid	+	growth
22961	17992 ChEBI	sucrose	-	builds acid from
22961	32528 ChEBI	turanose	-	builds acid from
22961	53426 ChEBI	tween 80	+	degradation
22961	18186 ChEBI	tyrosine	-	degradation
22961	16199 ChEBI	urea	-	hydrolysis
22961	15318 ChEBI	xanthine	-	degradation
22961	17151 ChEBI	xylitol	-	builds acid from

Antibiotic resistance

@ref	ChEBI	Metabolite	Sensitivity conc.	Resistance conc.
22961	2637	amikacin	30 µg
22961	28971	ampicillin		10 µg
22961	204928	cefotaxime	30 µg
22961	3542	cephalothin	30 µg
22961	17698	chloramphenicol	30 µg
22961	100241	ciprofloxacin	5 µg
22961	48923	erythromycin	15 µg
22961	71321	fusidate		10 µg
22961	17833	gentamicin	10 µg
22961	6104	kanamycin	30 µg
22961	6472	lincomycin		15 µg
22961	100147	nalidixic acid	30 µg
22961	7507	neomycin	30 µg
22961	17334	penicillin	10 Unit
22961	8309	polymyxin b		300 Unit
22961	28077	rifampicin	5 µg
22961	17076	streptomycin	10 µg
22961	27902	tetracycline	30 µg
22961	28001	vancomycin		30 µg

Metabolite production

@ref	Chebi-ID	Metabolite	Production
22961	35581 ChEBI	indole
116059	35581 ChEBI	indole

Enzymes

@ref	Value	Activity	Ec
22961	acid phosphatase	+	3.1.3.2
68382	acid phosphatase	-	3.1.3.2	from API zym
22961	alkaline phosphatase	+	3.1.3.1
68382	alkaline phosphatase	-	3.1.3.1	from API zym
22961	alpha-chymotrypsin	-	3.4.21.1
68382	alpha-chymotrypsin	-	3.4.21.1	from API zym
22961	alpha-fucosidase	-	3.2.1.51
68382	alpha-fucosidase	-	3.2.1.51	from API zym
22961	alpha-galactosidase	-	3.2.1.22
68382	alpha-galactosidase	-	3.2.1.22	from API zym
22961	alpha-glucosidase	-	3.2.1.20
68382	alpha-glucosidase	-	3.2.1.20	from API zym
22961	alpha-mannosidase	-	3.2.1.24
68382	alpha-mannosidase	-	3.2.1.24	from API zym
22961	beta-galactosidase	-	3.2.1.23
68382	beta-galactosidase	-	3.2.1.23	from API zym
68382	beta-glucosidase	-	3.2.1.21	from API zym
22961	beta-glucuronidase	-	3.2.1.31
68382	beta-glucuronidase	-	3.2.1.31	from API zym
22961	catalase	+	1.11.1.6
116059	catalase	+	1.11.1.6
22961	cystine arylamidase	-	3.4.11.3
68382	cystine arylamidase	-	3.4.11.3	from API zym
22961	cytochrome oxidase	+	1.9.3.1
22961	esterase (C 4)	+
68382	esterase (C 4)	+		from API zym
22961	esterase lipase (C 8)	+
68382	esterase lipase (C 8)	+		from API zym
22961	leucine arylamidase	-	3.4.11.1
68382	leucine arylamidase	-	3.4.11.1	from API zym
22961	lipase (C 14)	-
68382	lipase (C 14)	-		from API zym
22961	N-acetyl-beta-glucosaminidase	-	3.2.1.52
68382	N-acetyl-beta-glucosaminidase	-	3.2.1.52	from API zym
22961	naphthol-AS-BI-phosphohydrolase	+
68382	naphthol-AS-BI-phosphohydrolase	+		from API zym
116059	oxidase	+
22961	trypsin	-	3.4.21.4
68382	trypsin	-	3.4.21.4	from API zym
22961	urease	-	3.5.1.5
116059	urease	-	3.5.1.5
22961	valine arylamidase	-
68382	valine arylamidase	-		from API zym

API zym

@ref	Control	Alkaline phosphatase	Esterase (C 4)	2-naphtyl caprylateEsterase Lipase (C 8)	Lipase (C 14)	L-leucyl-2-naphthylamideLeucine arylamidase	L-valyl-2-naphthylamideValine arylamidase	L-cystyl-2-naphthylamideCystine arylamidase	Trypsin	alpha- Chymotrypsin	Acid phosphatase	Naphthol-AS-BI-phosphateNaphthol-AS-BI-phosphohydrolase	alpha- Galactosidase	beta- Galactosidase	beta- Glucuronidase	alpha- Glucosidase	beta- Glucosidase	N-acetyl-beta- glucosaminidase	alpha- Mannosidase	alpha- Fucosidase
116059	-	-	+	+	-	-	-	-	-	-	-	+	-	-	-	-	-	-	-	-

Isolation, sampling and environmental information

Isolation source categories

Cat1	Cat2
#Environmental	#Air

Isolation

@ref	Sample type	Sampling date	Geographic location	Country	Country ISO 3 Code	Continent	Latitude	Longitude	Enrichment culture	Enrichment culture duration	Enrichment culture temperature
8074	air		Suwon (37° 16' 46'' N 126° 59' 10'' E)	Republic of Korea	KOR	Asia	37.2794	126.986 37.2794/126.986
22961									R2A agar with 200 mg cycloheximide ml 21	5 days	30
67772	Air sample	2005	Gyeonggi-do, Suwon	Republic of Korea	KOR	Asia	37.2794	126.986 37.2794/126.986
116059	Environment, Air sample		Suwon	Republic of Korea	KOR	Asia

Taxonmaps

69479

Global distribution of 16S sequence EF661571 (>99% sequence identity) for Roseomonas aerilata from Microbeatlas

Aquatic Samples	58
Soil Samples	53
Animal Samples	39
Plant Samples	120
Total Samples	270

Interaction and safety

Risk assessment

@ref	Biosafety level	Biosafety level comment
8074	1	Risk group (German classification) According to TRBA 466
67772	1
116059	1	Risk group (French classification) According to TRBA 466

Sequence information

Genome sequences

@ref	Description	Assembly level	INSDC accession	BV-BRC accession	IMG accession	NCBI tax ID	Score
67772	ASM71172v1 assembly for Roseomonas aerilata DSM 19363	contig	GCA_000711725	1123060.3	2565956516	1123060	45.96

16S sequences

@ref	Description	Accession	Length	Database	NCBI tax ID
8074	Roseomonas aerilata strain 5420S-30 16S ribosomal RNA gene, partial sequence	EF661571	1354		1123060
124043	Roseomonas aerilata DSM 19363 partial 16S rRNA gene, strain SSY	LT972174	1307		1123060

GC content

@ref	GC-content (mol%)	Method
8074	72.1
22961	72.1	high performance liquid chromatography (HPLC)

Genome-based predictions

Predictions

Predictions from Deep Learning for Genome Sequence Data. R package version 0.3.1 based on: Roseomonas aerilata DSM 19363
NCBI: GCA_000711725

@ref	Trait	Model	Prediction	Confidence in %	In training data
125439	oxygen_tolerance	BacteriaNetⓘ	aerobe	91.80	no
125439	gram_stain	BacteriaNetⓘ	negative	82.50	no
125439	motility	BacteriaNetⓘ	no	61.60	no
125439	spore_formation	BacteriaNetⓘ	no	51.80	no

Predictions from bacterial phenotypic traits through improved machine learning using high-quality, curated datasets based on: Roseomonas aerilata DSM 19363
PATRIC: 1123060.3

@ref	Trait	Model	Prediction	Confidence in %	In training data
125438	gram-positive	gram-positiveⓘ	no	95.81	yes
125438	anaerobic	anaerobicⓘ	no	94.20	yes
125438	spore-forming	spore-formingⓘ	no	80.42	no
125438	aerobic	aerobicⓘ	yes	85.44	yes
125438	thermophilic	thermophileⓘ	no	95.38	yes
125438	flagellated	motile2+ⓘ	yes	73.81	no

Literature

Topic	Title	Authors	Journal	DOI	Year
	Validation List no. 221: valid publication of new names and new combinations effectively published outside the IJSEM.	Oren A, Goker M.	Int J Syst Evol Microbiol	10.1099/ijsem.0.006562	2025
Phylogeny	Roseomonas fluminis sp. nov. isolated from sediment of a shallow stream.	Ko Y, Yim J, Hwang WM, Kang K, Ahn TY	Int J Syst Evol Microbiol	10.1099/ijsem.0.002578	2018
Phylogeny	Roseomonas aeriglobus sp. nov., isolated from an air-conditioning system.	Lee Y, Jeon CO	Antonie Van Leeuwenhoek	10.1007/s10482-017-0956-x	2017
Phylogeny	Roseomonas nepalensis sp. nov., isolated from oil-contaminated soil.	Chaudhary DK, Kim J	Int J Syst Evol Microbiol	10.1099/ijsem.0.001727	2017
Phylogeny	Roseomonas aerilata sp. nov., isolated from an air sample.	Yoo SH, Weon HY, Noh HJ, Hong SB, Lee CM, Kim BY, Kwon SW, Go SJ	Int J Syst Evol Microbiol	10.1099/ijs.0.65385-0	2008

References

#8074	Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 19363
#20215	Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )
#22961	Seung-Hee Yoo,Hang-Yeon Weon,Hyung-Jun Noh,Seung-Beom Hong,Chang-Muk Lee,Byung-Yong Kim,Soon-Wo Kwon,Seung-Joo Go: Roseomonas aerilata sp. nov., isolated from an air sample. IJSEM 58: 1482 - 1485 2008 ( DOI 10.1099/ijs.0.65385-0 , PubMed 18523199 )
#40348	; Curators of the CIP;
#67772	The University of Coimbra Bacteria Culture Collection (UCCCB) ; Curators of the UCCCB;
#68382	Automatically annotated from API zym .
#69479	João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta .
#116059	Collection of Institut Pasteur ; Curators of the CIP; CIP 110193
#124043	Isabel Schober, Julia Koblitz: Data extracted from sequence databases, automatically matched based on designation and taxonomy .
#125438	Julia Koblitz, Lorenz Christian Reimer, Rüdiger Pukall, Jörg Overmann: Predicting bacterial phenotypic traits through improved machine learning using high-quality, curated datasets. 2024 ( DOI 10.1101/2024.08.12.607695 )
#125439	Philipp Münch, René Mreches, Martin Binder, Hüseyin Anil Gündüz, Xiao-Yin To, Alice McHardy: deepG: Deep Learning for Genome Sequence Data. R package version 0.3.1 .
#126262	A. Lissin, I. Schober, J. F. Witte, H. Lüken, A. Podstawka, J. Koblitz, B. Bunk, P. Dawyndt, P. Vandamme, P. de Vos, J. Overmann, L. C. Reimer: StrainInfo—the central database for linked microbial strain identifiers. ( DOI 10.1093/database/baaf059 )

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Muricoccus aerilatus (DSM 19363, KACC 12521, 5420S-30)

Name and taxonomic classification

Morphology

Cell morphology

Colony morphology

Culture and growth conditions

Culture medium

Culture temp

Culture pH

Physiology and metabolism

Oxygen tolerance

Halophily

Metabolite utilization

Antibiotic resistance

Metabolite production

Enzymes

API zym

Isolation, sampling and environmental information

Isolation source categories

Isolation

Taxonmaps

Interaction and safety

Risk assessment

Sequence information

Genome sequences

Genome browser: GCA_000711725

16S sequences

GC content

Genome-based predictions

Predictions

Literature

Literature

References

BacDive

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