Name: Arthrobacter flavus DSM 15322
Creator: BacDive
License: http://creativecommons.org/licenses/by-nc/4.0/

Strain identifier

BacDive ID: 7596

Type strain:

Species: Arthrobacter flavus

Culture col. no.: DSM 15322, MTCC 3476, CMS 19Y, JCM 11496, CIP 107766, KCTC 9998

Strain history: CIP <- 2002, S. Shivaji, CCMB, Hyderabad, India: strain CMS 19y

NCBI tax ID(s): 95172 (species)

SI-ID 100510

CIP 107766, KCTC 9998, DSM 15322

Section

Arthrobacter flavus DSM 15322 is an obligate aerobe, psychrophilic, Gram-positive bacterium that was isolated from cyanobacterial mat sample.

Gram-positive
rod-shaped
obligate aerobe
psychrophilic
16S sequence
Bacteria

Information on the name and the taxonomic classification. Name and taxonomic classification

	Last LPSN update	14-12-2023 (DD-MM-YYYY)
	Domain	"Bacteria"
	Phylum	*Actinomycetota*
	Class	*Actinomycetes*
	Order	*Micrococcales*
	Family	*Micrococcaceae*
	Genus	*Arthrobacter*
	Species	**Arthrobacter flavus**
	Full Scientific Name (LPSN)	Arthrobacter flavus Reddy et al. 2000

Information on morphological and physiological properties Morphology

[Ref.: #119385]	Gram stain	positive

[Ref.: #119385]	Cell shape	rod-shaped

[Ref.: #119385]	Motility	no

Information on culture and growth conditions Culture and growth conditions

[Ref.: #5844]

Culture medium

NUTRIENT AGAR (OXOID CM3) (DSMZ Medium 605)

[Ref.: #5844]

Culture medium growth

[Ref.: #5844]

Culture medium link

Medium recipe at MediaDive

[Ref.: #5844]

Culture medium composition

expand / minimize

[Ref.: #37394]

Culture medium

MEDIUM 72- for trypto casein soja agar

[Ref.: #37394]

Culture medium growth

[Ref.: #37394]

Culture medium composition

expand / minimize

[Ref.: #119385]

Culture medium

CIP Medium 72

[Ref.: #119385]

Culture medium growth

[Ref.: #119385]

Culture medium link

Medium recipe provided by DSMZ

	Kind of temperature		Temperature
[Ref.: #5844]		growth	22 °C
[Ref.: #37394]		growth	25 °C
[Ref.: #67770]		growth	20 °C
[Ref.: #119385]		growth	15-30 °C
[Ref.: #119385]	no	growth	10 °C
[Ref.: #119385]	no	growth	37 °C
[Ref.: #119385]	no	growth	41 °C
[Ref.: #119385]	no	growth	45 °C

[Ref.: #5844]	Temperature range	psychrophilic
[Ref.: #37394]	Temperature range	mesophilic
[Ref.: #67770]	Temperature range	psychrophilic
[Ref.: #119385]	Temperature range	psychrophilic
[Ref.: #119385]	Temperature range	mesophilic
[Ref.: #119385]	Temperature range	thermophilic

Information on physiology and metabolism Physiology and metabolism

[Ref.: #119385]

Oxygen tolerance

obligate aerobe

	Salt	Tested relation		Salt conc.
[Ref.: #119385]	NaCl		growth	0-4	%
[Ref.: #119385]	NaCl	no	growth	6	%
[Ref.: #119385]	NaCl	no	growth	8	%
[Ref.: #119385]	NaCl	no	growth	10	%

[Ref.: #67770]

Observation

quinones: MK-9(H₂)

	Metabolite	Utilization activity	Kind of utilization tested
[Ref.: #119385]	citrate ChEBI	-	carbon source
[Ref.: #119385]	esculin ChEBI	-	hydrolysis
[Ref.: #119385]	hippurate ChEBI	+	hydrolysis
[Ref.: #119385]	nitrate ChEBI	+	reduction
[Ref.: #119385]	nitrite ChEBI	-	reduction

	Antibiotica	Metabolite	Antibiotic sensitivity	Antibiotic resistance
[Ref.: #119385]		0129 (2,4-Diamino-6,7-di-iso-propylpteridine phosphate)	yes	no

	Metabolite production	Metabolite	Production
[Ref.: #119385]		indole ChEBI	no

	Physiological tests	Metabolite	Voges-Proskauer-test	Methylred-test
[Ref.: #119385]		acetoin ChEBI	-
[Ref.: #119385]		glucose ChEBI		-

	Enzyme	Enzyme activity	EC number
[Ref.: #68382]	acid phosphatase	-	3.1.3.2	* from API zym
[Ref.: #119385]	alcohol dehydrogenase	-	1.1.1.1
[Ref.: #68382]	alkaline phosphatase	-	3.1.3.1	* from API zym
[Ref.: #68382]	alpha-chymotrypsin	-	3.4.21.1	* from API zym
[Ref.: #68382]	alpha-fucosidase	-	3.2.1.51	* from API zym
[Ref.: #68382]	alpha-galactosidase	+	3.2.1.22	* from API zym
[Ref.: #68382]	alpha-glucosidase	+	3.2.1.20	* from API zym
[Ref.: #68382]	alpha-mannosidase	-	3.2.1.24	* from API zym
[Ref.: #119385]	amylase	+
[Ref.: #119385]	beta-galactosidase	+	3.2.1.23
[Ref.: #68382]	beta-galactosidase	-	3.2.1.23	* from API zym
[Ref.: #68382]	beta-glucosidase	-	3.2.1.21	* from API zym
[Ref.: #68382]	beta-glucuronidase	-	3.2.1.31	* from API zym
[Ref.: #119385]	caseinase	-	3.4.21.50
[Ref.: #119385]	catalase	+	1.11.1.6
[Ref.: #68382]	cystine arylamidase	-	3.4.11.3	* from API zym
[Ref.: #119385]	DNase	+
[Ref.: #68382]	esterase (C 4)	+		* from API zym
[Ref.: #68382]	esterase lipase (C 8)	+		* from API zym
[Ref.: #119385]	gamma-glutamyltransferase	-	2.3.2.2
[Ref.: #119385]	gelatinase	+/-
[Ref.: #119385]	lecithinase	-
[Ref.: #68382]	leucine arylamidase	+	3.4.11.1	* from API zym
[Ref.: #119385]	lipase	-
[Ref.: #68382]	lipase (C 14)	-		* from API zym
[Ref.: #119385]	lysine decarboxylase	-	4.1.1.18
[Ref.: #68382]	N-acetyl-beta-glucosaminidase	-	3.2.1.52	* from API zym
[Ref.: #68382]	naphthol-AS-BI-phosphohydrolase	+		* from API zym
[Ref.: #119385]	ornithine decarboxylase	-	4.1.1.17
[Ref.: #119385]	oxidase	-
[Ref.: #119385]	phenylalanine ammonia-lyase	-	4.3.1.24
[Ref.: #68382]	trypsin	+	3.4.21.4	* from API zym
[Ref.: #119385]	tryptophan deaminase	-
[Ref.: #119385]	tween esterase	-
[Ref.: #119385]	urease	-	3.5.1.5
[Ref.: #68382]	valine arylamidase	-		* from API zym
	Only first 10 entries are displayed. Click here to see all.

API® zym:

Note that the displayed test results represent raw data and therefore may deviate!

	API ID	Control	2-naphthyl phosphateAlkaline phosphatase	2-naphthyl butyrateEsterase (C 4)	2-naphtyl caprylateEsterase Lipase (C 8)	2-naphthyl myristateLipase (C 14)	L-leucyl-2-naphthylamideLeucine arylamidase	L-valyl-2-naphthylamideValine arylamidase	L-cystyl-2-naphthylamideCystine arylamidase	N-benzoyl-DL-arginine-2-naphthylamideTrypsin	N-glutaryl-phenylalanine-2-naphthylamidealpha- Chymotrypsin	2-naphthyl phosphateAcid phosphatase	Naphthol-AS-BI-phosphateNaphthol-AS-BI-phosphohydrolase	6-Br-2-naphthyl-alphaD-galactpyranosidealpha- Galactosidase	2-naphthyl-betaD-galactpyranosidebeta- Galactosidase	Naphthol-AS-BI-betaD-glucuronidebeta- Glucuronidase	2-naphthyl-alphaD-glucopyranosidealpha- Glucosidase	6-Br-2-naphthyl-betaD-glucopyranosidebeta- Glucosidase	1-naphthyl-N-acetyl-betaD-glucosaminideN-acetyl-beta- glucosaminidase	6-Br-2-naphthyl-alphaD-mannopyranosidealpha- Mannosidase	2-naphthyl-alphaL-fucopyranosidealpha- Fucosidase
[Ref.: #119385]	10635	-	-	+	+	-	+	-	-	+	-	-	+	+	-	-	+	-	-	-	-

Information on isolation source, the sampling and environmental conditions Isolation, sampling and environmental information

[Ref.: #5844]	Sample type/isolated from	cyanobacterial mat sample
[Ref.: #5844]	Geographic location (country and/or sea, region)	McMurdo
[Ref.: #5844]	Continent	Australia and Oceania

[Ref.: #67770]	Sample type/isolated from	Cyanobacterial mat from a pond in Antarctica

[Ref.: #119385]	Sample type/isolated from	Sample, cyanobacterial material
[Ref.: #119385]	Country	Antarctica
[Ref.: #119385]	Country ISO 3 Code	ATA
[Ref.: #119385]	Continent	Antarctica
* marker position based on {}

Isolation sources categories

#Environmental	#Microbial community	#Microbial mat
#Host	#Microbial	#Bacteria

What are isolation sources categories?

[Ref.: #69479]

Global distribution of 16S sequence AB299278 (>99% sequence identity) for Arthrobacter from Microbeatlas

Aquatic Samples	42
Soil Samples	55
Animal Samples	212
Plant Samples	3
Total Samples	312

Information on possible application of the strain and its possible interaction with e.g. potential hosts Safety information

[Ref.: #5844]	Biosafety level	1	Risk group (German classification) According to TRBA 466
[Ref.: #119385]	Biosafety level	1	Risk group (French classification)

Information on genomic background e.g. entries in nucleic sequence databass Sequence information

16S Sequence information:

	Sequence accession description	Seq. accession number	Sequence length (bp)	Sequence database	Associated NCBI tax ID
[Ref.: #67770]	Arthrobacter flavus gene for 16S rRNA, partial sequence	AB299278	1377	ENA	95172 tax ID
[Ref.: #67770]	Arthrobacter flavus gene for 16S ribosomal RNA, partial sequence	AB537168	1458	ENA	95172 tax ID
[Ref.: #5844]	Arthrobacter haridrum partial 16S rRNA gene, isolate CMS-19Y	AJ242532	1446	ENA	95172 tax ID

[Ref.: #5844]	GC-content	64 mol%
[Ref.: #67770]	GC-content	62-66 mol%	thermal denaturation, midpoint method (Tm)

Availability in culture collections External links

[Ref.: #5844]

Culture collection no.

DSM 15322, MTCC 3476, CMS 19Y, JCM 11496, CIP 107766, KCTC 9998

[Ref.: #77041]

SI-ID 100510

Literature:

Topic	Title	Authors	Journal	DOI	Year
Phylogeny	Arthrobacter flavus sp. nov., a psychrophilic bacterium isolated from a pond in McMurdo Dry Valley, Antarctica.	Reddy GS, Aggarwal RK, Matsumoto GI, Shivaji S	Int J Syst Evol Microbiol	10.1099/00207713-50-4-1553	2000	*

References

#5844

Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 15322

#20215

Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )

#37394 ; Curators of the CIP;
#67770 Japan Collection of Microorganism (JCM) ; Curators of the JCM;

#68382

Automatically annotated from API zym .

#69479

João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta .

#77041

Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.: StrainInfo: A central database for resolving microbial strain identifiers . ( DOI 10.60712/SI-ID100510.1 )

#119385 Collection of Institut Pasteur ; Curators of the CIP; CIP 107766
* These data were automatically processed and therefore are not curated

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