Name: Rhodoglobus aureus DSM 15303
Creator: BacDive
License: http://creativecommons.org/licenses/by-nc/4.0/

Strain identifier

BacDive ID: 7494

Type strain:

Species: Rhodoglobus aureus

Culture col. no.: DSM 15303, CIP 107785, IAM 15170, JCM 12762, MTCC 4657, CMS 81y, NBRC 104579

Strain history: MTCC 4657 <-- G. S. N. Reddy CMS 81y.

NCBI tax ID(s): 191497 (species)

Section

Rhodoglobus aureus DSM 15303 is a psychrophilic bacterium that was isolated from cyanobacterial mat sample.

psychrophilic
16S sequence
Bacteria

Information on the name and the taxonomic classification. Name and taxonomic classification

	Last LPSN update	25-08-2022 (DD-MM-YYYY)
	Domain	Bacteria
	Phylum	Actinomycetota
	Class	Actinomycetes
	Order	Micrococcales
	Family	Microbacteriaceae
	Genus	Rhodoglobus
	Species	Rhodoglobus aureus
	Full Scientific Name (PNU)	Rhodoglobus aureus (Reddy et al. 2003) An et al. 2011

Synonym

Leifsonia aurea

Information on morphological and physiological properties Morphology

[Ref.: #18391]	Colony color	Beige (1001)
[Ref.: #18391]	Incubation period	10-14 days
[Ref.: #18391]	Cultivation medium used	ISP 2

[Ref.: #18391]	Colony color	Beige (1001)
[Ref.: #18391]	Incubation period	10-14 days
[Ref.: #18391]	Cultivation medium used	ISP 3

[Ref.: #18391]	Colony color	Beige (1001)
[Ref.: #18391]	Incubation period	10-14 days
[Ref.: #18391]	Cultivation medium used	ISP 4

[Ref.: #18391]	Colony color	Colorless
[Ref.: #18391]	Incubation period	10-14 days
[Ref.: #18391]	Cultivation medium used	ISP 5

[Ref.: #18391]	Colony color	Beige (1001)
[Ref.: #18391]	Incubation period	10-14 days
[Ref.: #18391]	Cultivation medium used	ISP 6

[Ref.: #18391]	Colony color	Beige (1001)
[Ref.: #18391]	Incubation period	10-14 days
[Ref.: #18391]	Cultivation medium used	ISP 7

[Ref.: #18391]	Medium Name (multicellularity)	ISP 2

[Ref.: #18391]	Medium Name (multicellularity)	ISP 3

[Ref.: #18391]	Medium Name (multicellularity)	ISP 4

[Ref.: #18391]	Medium Name (multicellularity)	ISP 5

[Ref.: #18391]	Medium Name (multicellularity)	ISP 6

[Ref.: #18391]	Medium Name (multicellularity)	ISP 7

Information on culture and growth conditions Culture and growth conditions

[Ref.: #5836]

Culture medium

R2A MEDIUM (DSMZ Medium 830)

[Ref.: #5836]

Culture medium growth

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Culture medium link

Medium recipe at MediaDive

[Ref.: #5836]

Culture medium composition

expand / minimize

[Ref.: #18391]

Culture medium

ISP 2

[Ref.: #18391]

Culture medium growth

[Ref.: #18391]

Culture medium composition

expand / minimize

[Ref.: #18391]

Culture medium

ISP 3

[Ref.: #18391]

Culture medium growth

[Ref.: #18391]

Culture medium composition

expand / minimize

[Ref.: #18391]

Culture medium

ISP 4

[Ref.: #18391]

Culture medium growth

[Ref.: #18391]

Culture medium composition

expand / minimize

[Ref.: #18391]

Culture medium

ISP 5

[Ref.: #18391]

Culture medium growth

[Ref.: #18391]

Culture medium composition

expand / minimize

[Ref.: #18391]

Culture medium

ISP 6

[Ref.: #18391]

Culture medium growth

[Ref.: #18391]

Culture medium composition

expand / minimize

[Ref.: #18391]

Culture medium

ISP 7

[Ref.: #18391]

Culture medium growth

[Ref.: #18391]

Culture medium composition

expand / minimize

[Ref.: #39942]

Culture medium

MEDIUM 72- for trypto casein soja agar

[Ref.: #39942]

Culture medium growth

[Ref.: #39942]

Culture medium composition

expand / minimize

		Temperature
[Ref.: #5836]	growth	20 °C
[Ref.: #18391]	optimum	22 °C
[Ref.: #39942]	growth	22 °C
[Ref.: #67770]	growth	22 °C

[Ref.: #5836]	Temperature range	psychrophilic
[Ref.: #18391]	Temperature range	psychrophilic
[Ref.: #39942]	Temperature range	psychrophilic
[Ref.: #67770]	Temperature range	psychrophilic

Information on physiology and metabolism Physiology and metabolism

[Ref.: #67770]

Observation

quinones: MK-11

	Metabolite	Utilization activity	Kind of utilization tested
[Ref.: #18391]	arabinose ChEBI	+
[Ref.: #18391]	cellulose ChEBI	+
[Ref.: #68379]	esculin ChEBI	+	hydrolysis	* from API Coryne
[Ref.: #18391]	fructose ChEBI	+
[Ref.: #68379]	gelatin ChEBI	-	hydrolysis	* from API Coryne
[Ref.: #18391]	glucose ChEBI	-
[Ref.: #18391]	mannitol ChEBI	+
[Ref.: #18391]	myo-inositol ChEBI	+
[Ref.: #18391]	raffinose ChEBI	-
[Ref.: #18391]	rhamnose ChEBI	+
[Ref.: #18391]	sucrose ChEBI	+
[Ref.: #68379]	sucrose ChEBI	-	fermentation	* from API Coryne
[Ref.: #68379]	urea ChEBI	-	hydrolysis	* from API Coryne
[Ref.: #18391]	xylose ChEBI	-
	Only first 10 entries are displayed. Click here to see all.

	Enzyme	Enzyme activity	EC number
[Ref.: #68382]	acid phosphatase	-	3.1.3.2	* from API zym
[Ref.: #68382]	alkaline phosphatase	+	3.1.3.1	* from API zym
[Ref.: #68379]	alkaline phosphatase	-	3.1.3.1	* from API Coryne
[Ref.: #68382]	alpha-chymotrypsin	-	3.4.21.1	* from API zym
[Ref.: #68382]	alpha-fucosidase	-	3.2.1.51	* from API zym
[Ref.: #68382]	alpha-galactosidase	+	3.2.1.22	* from API zym
[Ref.: #68379]	alpha-glucosidase	+	3.2.1.20	* from API Coryne, API zym
[Ref.: #68382]	alpha-mannosidase	+	3.2.1.24	* from API zym
[Ref.: #68379]	beta-galactosidase	+	3.2.1.23	* from API Coryne, API zym
[Ref.: #68379]	beta-glucosidase	+	3.2.1.21	* from API Coryne, API zym
[Ref.: #68379]	beta-glucuronidase	-	3.2.1.31	* from API Coryne, API zym
[Ref.: #68382]	cystine arylamidase	-	3.4.11.3	* from API zym
[Ref.: #68382]	esterase (C 4)	+		* from API zym
[Ref.: #68382]	esterase lipase (C 8)	+		* from API zym
[Ref.: #68379]	gelatinase	-		* from API Coryne
[Ref.: #68382]	leucine arylamidase	+	3.4.11.1	* from API zym
[Ref.: #68382]	lipase (C 14)	-		* from API zym
[Ref.: #68379]	N-acetyl-beta-glucosaminidase	-	3.2.1.52	* from API Coryne, API zym
[Ref.: #68382]	naphthol-AS-BI-phosphohydrolase	-		* from API zym
[Ref.: #68379]	pyrazinamidase	-	3.5.1.B15	* from API Coryne
[Ref.: #68379]	pyrrolidonyl arylamidase	-	3.4.19.3	* from API Coryne
[Ref.: #68382]	trypsin	-	3.4.21.4	* from API zym
[Ref.: #68379]	urease	-	3.5.1.5	* from API Coryne
[Ref.: #68382]	valine arylamidase	+		* from API zym
	Only first 10 entries are displayed. Click here to see all.

API® Coryne:

Note that the displayed test results represent raw data and therefore may deviate!

	API ID	Reduction of nitrateNIT	PyrazinamidasePYZ	Pyrrolidonyl arylamidasePYRA	Alkaline phosphatasePAL	beta-Glucuronidasebeta GUR	beta-Galactosidasebeta GAL	alpha-Glucosidasealpha GLU	N-Acetyl-beta-Glucosidasebeta NAG	Esculin hydrolysis/beta-GlucosidaseESC	Urease/urea hydrolysisURE	Gelatinase/gelatin hydrolysisGEL	Control fermentationControl	Fermentation of D-glucoseGLU	Fermentation of D-riboseRIB	Fermentation of D-xyloseXYL	Fermentation of D-mannitolMAN	Fermentation of maltoseMAL	Fermentation of lactoseLAC	Fermentation of sucroseSAC	Fermentation of glycogenGLYG	CatalaseCAT
[Ref.: #18391]	77	not determinedn.d.	-	-	-	-	+	+	-	+	-	-	not determinedn.d.	not determinedn.d.	not determinedn.d.	not determinedn.d.	not determinedn.d.	not determinedn.d.	not determinedn.d.	-	not determinedn.d.	not determinedn.d.

API® zym:

Note that the displayed test results represent raw data and therefore may deviate!

	API ID	Control	2-naphthyl phosphateAlkaline phosphatase	2-naphthyl butyrateEsterase (C 4)	2-naphtyl caprylateEsterase Lipase (C 8)	2-naphthyl myristateLipase (C 14)	L-leucyl-2-naphthylamideLeucine arylamidase	L-valyl-2-naphthylamideValine arylamidase	L-cystyl-2-naphthylamideCystine arylamidase	N-benzoyl-DL-arginine-2-naphthylamideTrypsin	N-glutaryl-phenylalanine-2-naphthylamidealpha- Chymotrypsin	2-naphthyl phosphateAcid phosphatase	Naphthol-AS-BI-phosphateNaphthol-AS-BI-phosphohydrolase	6-Br-2-naphthyl-alphaD-galactpyranosidealpha- Galactosidase	2-naphthyl-betaD-galactpyranosidebeta- Galactosidase	Naphthol-AS-BI-betaD-glucuronidebeta- Glucuronidase	2-naphthyl-alphaD-glucopyranosidealpha- Glucosidase	6-Br-2-naphthyl-betaD-glucopyranosidebeta- Glucosidase	1-naphthyl-N-acetyl-betaD-glucosaminideN-acetyl-beta- glucosaminidase	6-Br-2-naphthyl-alphaD-mannopyranosidealpha- Mannosidase	2-naphthyl-alphaL-fucopyranosidealpha- Fucosidase
[Ref.: #18391]	101	not determinedn.d.	+	+	+	-	+	+	-	-	-	-	-	+	+	-	+	+	-	+	-

Information on isolation source, the sampling and environmental conditions Isolation, sampling and environmental information

[Ref.: #5836]	Sample type/isolated from	cyanobacterial mat sample
[Ref.: #5836]	Geographic location (country and/or sea, region)	McMurdo, Wright Valley
[Ref.: #5836]	Continent	Australia and Oceania

[Ref.: #67770]	Sample type/isolated from	Cyanobacterial mat from a pond
[Ref.: #67770]	Geographic location (country and/or sea, region)	Wright Valley, McMurdo
[Ref.: #67770]	Country	Antarctica
[Ref.: #67770]	Country ISO 3 Code	ATA
[Ref.: #67770]	Continent	Antarctica

Isolation sources categories

#Environmental	#Microbial community	#Microbial mat
#Host	#Microbial	#Bacteria

What are isolation sources categories?

Information on possible application of the strain and its possible interaction with e.g. potential hosts Safety information

[Ref.: #18391]	Biosafety level	1
[Ref.: #5836]	Biosafety level	1	Risk group (German classification) According to TRBA 466

Information on genomic background e.g. entries in nucleic sequence databass Sequence information

16S Sequence information:

	Sequence accession description	Seq. accession number	Sequence length (bp)	Sequence database	Associated NCBI tax ID
[Ref.: #5836]	Leifsonia aureus 16S rRNA gene, type strain CMS 81	AJ438586	1513	ENA	191497 tax ID

[Ref.: #5836]	GC-content	64 mol%
[Ref.: #67770]	GC-content	64 mol%	thermal denaturation, midpoint method (Tm)

Availability in culture collections External links

[Ref.: #5836]

Culture collection no.

DSM 15303, CIP 107785, IAM 15170, JCM 12762, MTCC 4657, CMS 81y, NBRC 104579

[Ref.: #20218]

Associated Passport(s) in StrainInfo

340603, 340604, 699629, 555934, 340605

Literature:

Topic	Title	Authors	Journal	DOI	Year
Phylogeny	Leifsonia rubra sp. nov. and Leifsonia aurea sp. nov., psychrophiles from a pond in Antarctica.	Reddy GSN, Prakash JSS, Srinivas R, Matsumoto GI, Shivaji S	Int J Syst Evol Microbiol	10.1099/ijs.0.02396-0	2003	*

References

#5836

Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 15303

#18391

Wink, J.: Compendium of Actinobacteria. HZI-Helmholtz-Centre for Infection Research, Braunschweig .

#20215

Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )

#20218

Verslyppe, B., De Smet, W., De Baets, B., De Vos, P., Dawyndt P.: StrainInfo introduces electronic passports for microorganisms.. Syst Appl Microbiol. 37: 42 - 50 2014 ( DOI 10.1016/j.syapm.2013.11.002 , PubMed 24321274 )

#39942 ; Curators of the CIP;
#67770 Japan Collection of Microorganism (JCM) ; Curators of the JCM;

#68379

Automatically annotated from API Coryne .

#68382

Automatically annotated from API zym .

* These data were automatically processed and therefore are not curated

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