Name: Gulosibacter faecalis DSM 17446
Creator: BacDive
License: http://creativecommons.org/licenses/by-nc/4.0/

Strain identifier

BacDive ID: 7476

Type strain:

Species: Gulosibacter faecalis

Culture col. no.: DSM 17446, IAM 15030, JCM 12866, NBRC 15706, TISTR 1514, ATCC 13722, CCUG 37873, CCUG 38434, CIP 108568, IFO 15706, NCTC 11398

Strain history: NBRC 15706 (Corynebacterium bovis) <-- IFO 15706 <-- ATCC 13722 <-- H. P. Broquist B187.

NCBI tax ID(s): 1915061 (species)

SI-ID 35867

ATCC 13722, IFO 15706, NCTC 11398, CCUG 37873, CCUG 38434, DSM 20154, NCDO 1718, IAM 15030, NBRC 15706, TISTR 1514, JCM 12866, CIP 108568

Other strains from Gulosibacter faecalis

G. faecalis B 187, DSM 20154, NCDO 1718, ATCC ... (type strain)

Section

Gulosibacter faecalis DSM 17446 is an aerobe, mesophilic, Gram-positive bacterium that was isolated from cow faeces.

Gram-positive
rod-shaped
aerobe
mesophilic
16S sequence
Bacteria
genome sequence

Information on the name and the taxonomic classification. Name and taxonomic classification

	Last LPSN update	14-12-2023 (DD-MM-YYYY)
	Domain	"Bacteria"
	Phylum	*Actinomycetota*
	Class	*Actinomycetes*
	Order	*Micrococcales*
	Family	*Microbacteriaceae*
	Genus	*Gulosibacter*
	Species	**Gulosibacter faecalis**
	Full Scientific Name (LPSN)	Gulosibacter faecalis (Lin et al. 2004) Nouioui et al. 2018

Synonym

Zimmermannella faecalis

Information on morphological and physiological properties Morphology

[Ref.: #29956]	Gram stain	positive

[Ref.: #29956]	Cell length	0.8 µm

[Ref.: #29956]	Cell width	0.35 µm

[Ref.: #29956]	Cell shape	rod-shaped

[Ref.: #29956]	Motility	no

Information on culture and growth conditions Culture and growth conditions

	Temperatures	Kind of temperature		Temperature
[Ref.: #29956]			optimum	30 °C
[Ref.: #67770]			growth	28 °C

[Ref.: #29956]	Temperature range	mesophilic
[Ref.: #67770]	Temperature range	mesophilic

	pH	Kind of pH		pH
[Ref.: #29956]			optimum	7

Information on physiology and metabolism Physiology and metabolism

[Ref.: #29956]

Oxygen tolerance

aerobe

[Ref.: #29956]

Ability of spore formation

	Halophily	Salt	Tested relation		Salt conc.
[Ref.: #29956]		NaCl		growth	0.2-0.3	%
[Ref.: #29956]		NaCl		optimum	0.25	%

[Ref.: #67770]

Observation

quinones: MK-9

	Metabolite	Utilization activity	Kind of utilization tested
[Ref.: #29956]	alanine ChEBI	+	carbon source
[Ref.: #29956]	fructose ChEBI	+	carbon source
[Ref.: #29956]	glucose ChEBI	+	carbon source
[Ref.: #29956]	glycine ChEBI	+	carbon source
[Ref.: #29956]	mannitol ChEBI	+	carbon source
[Ref.: #29956]	mannose ChEBI	+	carbon source
[Ref.: #29956]	myo-inositol ChEBI	+	carbon source
[Ref.: #29956]	rhamnose ChEBI	+	carbon source
[Ref.: #29956]	serine ChEBI	+	carbon source

	Enzymes	Enzyme	Enzyme activity	EC number
[Ref.: #29956]		catalase	+	1.11.1.6
[Ref.: #29956]		cytochrome oxidase	+	1.9.3.1

Information on isolation source, the sampling and environmental conditions Isolation, sampling and environmental information

[Ref.: #6987]	Sample type/isolated from	cow faeces
[Ref.: #6987]	Country	Japan
[Ref.: #6987]	Country ISO 3 Code	JPN
[Ref.: #6987]	Continent	Asia

[Ref.: #67770]	Sample type/isolated from	Cow faeces
* marker position based on {}

Isolation sources categories

#Host	#Mammals	#Bovinae (Cow, Cattle)
#Host Body Product	#Gastrointestinal tract	#Feces (Stool)

What are isolation sources categories?

[Ref.: #69479]

Global distribution of 16S sequence AF300651 (>99% sequence identity) for Gulosibacter from Microbeatlas

Aquatic Samples	796
Soil Samples	366
Animal Samples	3193
Plant Samples	165
Total Samples	4520

Information on possible application of the strain and its possible interaction with e.g. potential hosts Safety information

[Ref.: #6987]

Biosafety level

Risk group (German classification)
According to TRBA 466

Information on genomic background e.g. entries in nucleic sequence databass Sequence information

16S Sequence information:

	Sequence accession description	Seq. accession number	Sequence length (bp)	Sequence database	Associated NCBI tax ID
[Ref.: #29956]	Zimmermannella faecalis gene for 16S rRNA, partial sequence, strain: IFO 15706	AB012591	1488	GenBank	272240 tax ID
[Ref.: #20218]	Pseudoclavibacter faecalis strain ATCC 13722 16S ribosomal RNA gene, partial sequence	AF300651	1250	ENA	272240 tax ID	*

Genome sequence information:

	Sequence accession description	Seq. accession number	Assembly level	Sequence database	Associated NCBI tax ID
[Ref.: #67770]	[Zimmermannella] faecalis ATCC 13722 B187	GCA_000381765	scaffold	GenBank	1278308 tax ID

[Ref.: #29956]	GC-content	67 mol%
[Ref.: #67770]	GC-content	67 mol%	high performance liquid chromatography (HPLC)
[Ref.: #67770]	GC-content	68.5 mol%	genome sequence analysis

Data predicted using genome information as a basis Genome-based predictions

	Trait	Prediction	Confidence in %	In training data
	Predictions from Diaspora project based on: [Zimmermannella] faecalis ATCC 13722 B187 NCBI: GCA_000381765.1
[Ref.: #69480]	motile	no	92.939	yes
[Ref.: #69480]	flagellated	no	96.478	yes
[Ref.: #69480]	gram-positive	yes	93.082	no
[Ref.: #69480]	anaerobic	no	99.132	yes
[Ref.: #69480]	aerobic	yes	90.329	yes
[Ref.: #69480]	halophile	no	76.396	yes
[Ref.: #69480]	spore-forming	no	91.949	no
[Ref.: #69480]	thermophile	no	98.801	yes
[Ref.: #69480]	glucose-util	yes	82.588	no
[Ref.: #69480]	glucose-ferment	no	76.85	no

Availability in culture collections External links

[Ref.: #6987]

Culture collection no.

DSM 17446, IAM 15030, JCM 12866, NBRC 15706, TISTR 1514, ATCC 13722, CCUG 37873, CCUG 38434, CIP 108568, IFO 15706, NCTC 11398

[Ref.: #76921]

SI-ID 35867

Literature:

Topic	Title	Authors	Journal	DOI	Year
Phylogeny	Gulosibacter sediminis sp. nov., isolated from Indian Ocean marine sediment.	Jiang Z, Zhang WH, Song D, Xiao M, Phurbu D, Liu BB, Guo SX, Chen W, Li WJ	Int J Syst Evol Microbiol	10.1099/ijsem.0.004906	2021	*

References

#6987

Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 17446

#20215

Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )

#20218

Verslyppe, B., De Smet, W., De Baets, B., De Vos, P., Dawyndt P.: StrainInfo introduces electronic passports for microorganisms.. Syst Appl Microbiol. 37: 42 - 50 2014 ( DOI 10.1016/j.syapm.2013.11.002 , PubMed 24321274 )

#29956

Barberan A, Caceres Velazquez H, Jones S, Fierer N.: Hiding in Plain Sight: Mining Bacterial Species Records for Phenotypic Trait Information. mSphere 2: 2017 ( DOI 10.1128/mSphere.00237-17 , PubMed 28776041 ) - originally annotated from #26325 (see below)

#67770 Japan Collection of Microorganism (JCM) ; Curators of the JCM;

#69479

João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta .

#69480

Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Predictions based on genome sequence made in the Diaspora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

#76921

Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.: StrainInfo: A central database for resolving microbial strain identifiers . ( DOI 10.60712/SI-ID35867.1 )

#26325

IJSEM 1669 2004 ( DOI 10.1099/ijs.0.02741-0 , PubMed 15388726 )

* These data were automatically processed and therefore are not curated

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[Zimmermannella] faecalis ATCC 13722 B187

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