Name: Microbacterium luteolum 69
Creator: BacDive
License: http://creativecommons.org/licenses/by-nc/4.0/

Strain identifier

BacDive ID: 7376

Type strain:

Species: Microbacterium luteolum

Strain Designation: 69

Culture col. no.: DSM 20143, ATCC 51474, IFO 15074, NBRC 15074, NCIB 9568, NRRL B-24230, JCM 9174, CCM 4365, CCUG 43281, CIP 102086, IAM 15204, LMG 16207, NCIMB 9568, VTT E-97042

Strain history: CIP <- 1985, DSM <- NCIB <- T. Gibson <- L.E. Topping: strain 69

NCBI tax ID(s): 69367 (species)

SI-ID 8204

LMG 16207, ATCC 51474, CIP 102086, DSM 20143, IFO 15074, JCM 9174, NCIMB 9568, NCIB 9568, CCM 4365, CCUG 43281, NBRC 15074, NRRL B-24230, VTT E-97042, IAM 15204

Other strains from Microbacterium luteolum

M. luteolum ST033240(HKI),
M. luteolum CCUG 43281, CCM 4365

Section

Microbacterium luteolum 69 is an obligate aerobe, mesophilic, Gram-positive bacterium that was isolated from soil.

Gram-positive
rod-shaped
mesophilic
obligate aerobe
16S sequence
Bacteria

Information on the name and the taxonomic classification. Name and taxonomic classification

	Last LPSN update	14-12-2023 (DD-MM-YYYY)
	Domain	"Bacteria"
	Phylum	*Actinomycetota*
	Class	*Actinomycetes*
	Order	*Micrococcales*
	Family	*Microbacteriaceae*
	Genus	*Microbacterium*
	Species	**Microbacterium luteolum**
	Full Scientific Name (LPSN)	Microbacterium luteolum (Yokota et al. 1993) Takeuchi and Hatano 1998

Synonym

Aureobacterium luteolum

Information on morphological and physiological properties Morphology

[Ref.: #120693]	Gram stain	positive

[Ref.: #120693]	Cell shape	rod-shaped

[Ref.: #120693]	Motility	no

[Ref.: #18424]	Colony color	Colorless
[Ref.: #18424]	Incubation period	10-14 days
[Ref.: #18424]	Cultivation medium used	ISP 2

[Ref.: #18424]	Colony color	Zinc yellow (1018)
[Ref.: #18424]	Incubation period	10-14 days
[Ref.: #18424]	Cultivation medium used	ISP 3

[Ref.: #18424]	Colony color	Beige (1001)
[Ref.: #18424]	Incubation period	10-14 days
[Ref.: #18424]	Cultivation medium used	ISP 4

[Ref.: #18424]	Colony color	Beige (1001)
[Ref.: #18424]	Incubation period	10-14 days
[Ref.: #18424]	Cultivation medium used	ISP 5

[Ref.: #18424]	Colony color	Zinc yellow (1018)
[Ref.: #18424]	Incubation period	10-14 days
[Ref.: #18424]	Cultivation medium used	ISP 6

[Ref.: #18424]	Colony color	Colorless
[Ref.: #18424]	Incubation period	10-14 days
[Ref.: #18424]	Cultivation medium used	ISP 7

[Ref.: #18424]	Multicellular complex forming ability	no
[Ref.: #18424]	Medium Name (multicellularity)	ISP 2

[Ref.: #18424]	Multicellular complex forming ability	no
[Ref.: #18424]	Medium Name (multicellularity)	ISP 3

[Ref.: #18424]	Multicellular complex forming ability	no
[Ref.: #18424]	Medium Name (multicellularity)	ISP 4

[Ref.: #18424]	Multicellular complex forming ability	no
[Ref.: #18424]	Medium Name (multicellularity)	ISP 5

[Ref.: #18424]	Multicellular complex forming ability	no
[Ref.: #18424]	Medium Name (multicellularity)	ISP 6

[Ref.: #18424]	Multicellular complex forming ability	no
[Ref.: #18424]	Medium Name (multicellularity)	ISP 7

Information on culture and growth conditions Culture and growth conditions

[Ref.: #8567]

Culture medium

CORYNEBACTERIUM AGAR (DSMZ Medium 53)

[Ref.: #8567]

Culture medium growth

[Ref.: #8567]

Culture medium link

Medium recipe at MediaDive

[Ref.: #8567]

Culture medium composition

expand / minimize

[Ref.: #18424]

Culture medium

ISP 2

[Ref.: #18424]

Culture medium growth

[Ref.: #18424]

Culture medium composition

expand / minimize

[Ref.: #18424]

Culture medium

ISP 3

[Ref.: #18424]

Culture medium growth

[Ref.: #18424]

Culture medium composition

expand / minimize

[Ref.: #18424]

Culture medium

ISP 4

[Ref.: #18424]

Culture medium growth

[Ref.: #18424]

Culture medium composition

expand / minimize

[Ref.: #18424]

Culture medium

ISP 5

[Ref.: #18424]

Culture medium growth

[Ref.: #18424]

Culture medium composition

expand / minimize

[Ref.: #18424]

Culture medium

ISP 6

[Ref.: #18424]

Culture medium growth

[Ref.: #18424]

Culture medium composition

expand / minimize

[Ref.: #18424]

Culture medium

ISP 7

[Ref.: #18424]

Culture medium growth

[Ref.: #18424]

Culture medium composition

expand / minimize

[Ref.: #40319]

Culture medium

MEDIUM 3 - Columbia agar

[Ref.: #40319]

Culture medium growth

[Ref.: #40319]

Culture medium composition

expand / minimize

[Ref.: #120693]

Culture medium

CIP Medium 3

[Ref.: #120693]

Culture medium growth

[Ref.: #120693]

Culture medium link

Medium recipe provided by DSMZ

	Kind of temperature		Temperature
[Ref.: #8567]		growth	30 °C
[Ref.: #18424]		optimum	28 °C
[Ref.: #40319]		growth	30 °C
[Ref.: #67770]		growth	28 °C
[Ref.: #120693]		growth	15-30 °C
[Ref.: #120693]	no	growth	10 °C
[Ref.: #120693]	no	growth	37 °C
[Ref.: #120693]	no	growth	41 °C
[Ref.: #120693]	no	growth	45 °C

[Ref.: #8567]	Temperature range	mesophilic
[Ref.: #18424]	Temperature range	mesophilic
[Ref.: #40319]	Temperature range	mesophilic
[Ref.: #67770]	Temperature range	mesophilic
[Ref.: #120693]	Temperature range	psychrophilic
[Ref.: #120693]	Temperature range	mesophilic
[Ref.: #120693]	Temperature range	thermophilic

Information on physiology and metabolism Physiology and metabolism

[Ref.: #120693]

Oxygen tolerance

obligate aerobe

	Salt	Tested relation		Salt conc.
[Ref.: #120693]	NaCl		growth	0-4	%
[Ref.: #120693]	NaCl	no	growth	6	%
[Ref.: #120693]	NaCl	no	growth	8	%
[Ref.: #120693]	NaCl	no	growth	10	%

[Ref.: #8567]	Murein short key	B06
[Ref.: #8567]	Murein types	B2ß {Gly} [L-Hsr] D-Glu(Hyg)-Gly-D-Orn

[Ref.: #67770]

Observation

quinones: MK-12, MK-11, MK-13

	Metabolite	Utilization activity	Kind of utilization tested
[Ref.: #120693]	citrate ChEBI	-	carbon source
[Ref.: #68379]	D-glucose ChEBI	-	fermentation	* from API Coryne
[Ref.: #68379]	D-mannitol ChEBI	-	fermentation	* from API Coryne
[Ref.: #68379]	D-ribose ChEBI	-	fermentation	* from API Coryne
[Ref.: #68379]	D-xylose ChEBI	-	fermentation	* from API Coryne
[Ref.: #120693]	esculin ChEBI	+	hydrolysis
[Ref.: #68379]	esculin ChEBI	+	hydrolysis	* from API Coryne
[Ref.: #68379]	gelatin ChEBI	+	hydrolysis	* from API Coryne
[Ref.: #68379]	glycogen ChEBI	-	fermentation	* from API Coryne
[Ref.: #120693]	hippurate ChEBI	+	hydrolysis
[Ref.: #68379]	lactose ChEBI	-	fermentation	* from API Coryne
[Ref.: #68379]	maltose ChEBI	-	fermentation	* from API Coryne
[Ref.: #120693]	nitrate ChEBI	-	reduction
[Ref.: #120693]	nitrate ChEBI	-	respiration
[Ref.: #68379]	nitrate ChEBI	-	reduction	* from API Coryne
[Ref.: #120693]	nitrite ChEBI	-	reduction
[Ref.: #68379]	sucrose ChEBI	-	fermentation	* from API Coryne
[Ref.: #68379]	urea ChEBI	+	hydrolysis	* from API Coryne
	Only first 10 entries are displayed. Click here to see all.

	Antibiotica	Metabolite	Antibiotic sensitivity	Antibiotic resistance
[Ref.: #120693]		0129 (2,4-Diamino-6,7-di-iso-propylpteridine phosphate)	yes	no

	Metabolite production	Metabolite	Production
[Ref.: #120693]		indole ChEBI	no

	Physiological tests	Metabolite	Voges-Proskauer-test	Methylred-test
[Ref.: #120693]		acetoin ChEBI	-
[Ref.: #120693]		glucose ChEBI		-

	Enzyme	Enzyme activity	EC number
[Ref.: #120693]	alcohol dehydrogenase	-	1.1.1.1
[Ref.: #68382]	alkaline phosphatase	-	3.1.3.1	* from API zym, API Coryne
[Ref.: #68382]	alpha-chymotrypsin	-	3.4.21.1	* from API zym
[Ref.: #68382]	alpha-fucosidase	-	3.2.1.51	* from API zym
[Ref.: #68382]	alpha-glucosidase	+	3.2.1.20	* from API zym, API Coryne
[Ref.: #68382]	alpha-mannosidase	+	3.2.1.24	* from API zym
[Ref.: #120693]	amylase	-
[Ref.: #120693]	beta-galactosidase	+	3.2.1.23
[Ref.: #68382]	beta-galactosidase	+	3.2.1.23	* from API zym, API Coryne
[Ref.: #68382]	beta-glucosidase	+	3.2.1.21	* from API zym, API Coryne
[Ref.: #68382]	beta-glucuronidase	-	3.2.1.31	* from API zym, API Coryne
[Ref.: #120693]	caseinase	+	3.4.21.50
[Ref.: #120693]	catalase	+	1.11.1.6
[Ref.: #120693]	DNase	+
[Ref.: #68382]	esterase (C 4)	+		* from API zym
[Ref.: #68382]	esterase lipase (C 8)	+		* from API zym
[Ref.: #120693]	gamma-glutamyltransferase	-	2.3.2.2
[Ref.: #120693]	gelatinase	+/-
[Ref.: #68379]	gelatinase	+		* from API Coryne
[Ref.: #120693]	lecithinase	-
[Ref.: #68382]	leucine arylamidase	+	3.4.11.1	* from API zym
[Ref.: #120693]	lipase	-
[Ref.: #68382]	lipase (C 14)	-		* from API zym
[Ref.: #120693]	lysine decarboxylase	-	4.1.1.18
[Ref.: #68382]	N-acetyl-beta-glucosaminidase	-	3.2.1.52	* from API zym, API Coryne
[Ref.: #120693]	ornithine decarboxylase	-	4.1.1.17
[Ref.: #120693]	oxidase	-
[Ref.: #120693]	phenylalanine ammonia-lyase	-	4.3.1.24
[Ref.: #120693]	protease	-
[Ref.: #68379]	pyrazinamidase	-	3.5.1.B15	* from API Coryne
[Ref.: #68379]	pyrrolidonyl arylamidase	-	3.4.19.3	* from API Coryne
[Ref.: #120693]	tryptophan deaminase	-
[Ref.: #120693]	tween esterase	-
[Ref.: #120693]	urease	-	3.5.1.5
[Ref.: #68379]	urease	+	3.5.1.5	* from API Coryne
[Ref.: #68382]	valine arylamidase	+		* from API zym
	Only first 10 entries are displayed. Click here to see all.

API® Biotype100:

Note that the displayed test results represent raw data and therefore may deviate!

	API ID	ControlQ	D-glucose as carbon sourceGLU	D-fructose as carbon sourceFRU	D-galactose as carbon sourceGAL	D-trehalose as carbon sourceTRE	D-mannose as carbon sourceMNE	L-sorbose as carbon sourceSBE	D-melibiose as carbon sourceMEL	sucrose as carbon sourceSAC	D-raffinose as carbon sourceRAF	maltotriose as carbon sourceMTE	maltose as carbon sourceMAL	lactose as carbon sourceLAC	lactulose as carbon sourceLTE	1-O-methyl-beta-galactopyranoside as carbon sourceMbGa	1-O-methyl-alpha-galactopyranoside as carbon sourceMaGa	D-cellobiose as carbon sourceCEL	gentiobiose as carbon sourceGEN	1-O-methyl-beta-D-glucopyranoside as carbon sourceMbGu	esculin as carbon sourceESC	D-ribose as carbon sourceRIB	L-arabinose as carbon sourceARA	D-xylose as carbon sourceXYL	palatinose as carbon sourcePLE	L-rhamnose as carbon sourceRHA	L-fucose as carbon sourceFUC	D-melezitose as carbon sourceMLZ	D-arabitol as carbon sourceDARL	L-arabitol as carbon sourceLARL	xylitol as carbon sourceXLT	dulcitol as carbon sourceDUL	D-tagatose as carbon sourceTAG	glycerol as carbon sourceGLY	myo-inositol as carbon sourceINO	D-mannitol as carbon sourceMAN	maltitol as carbon sourceMTL	D-turanose as carbon sourceTUR	D-sorbitol as carbon sourceSOR	adonitol as carbon sourceADO	hydroxyquinoline-beta-glucuronide as carbon sourceHBG	D-lyxose as carbon sourceLYX	i-erythritol as carbon sourceERY	1-O-methyl-alpha-D-glucoside as carbon sourceMDG	3-O-methyl-D-glucose as carbon source3MDG	D-saccharate as carbon sourceSAT	mucate as carbon sourceMUC	L-tartrate as carbon sourceLTAT	D-tartrate as carbon sourceDTAT	meso-tartrate as carbon sourceMTAT	D-malate as carbon sourceDMLT	L-malate as carbon sourceLMLT	cis-aconitate as carbon sourceCATE	trans-aconitate as carbon sourceTATE	tricarballylate as carbon sourceTTE	citrate as carbon sourceCIT	D-glucuronate as carbon sourceGRT	D-galacturonate as carbon sourceGAT	2-ketogluconate as carbon source2KG	5-ketogluconate as carbon source5KG	tryptophan as carbon sourceTRY	N-acetyl-D-glucosamine as carbon sourceNAG	D-gluconate as carbon sourceGNT	phenylacetate as carbon sourcePAC	protocatechuate as carbon sourcePAT	4-hydroxybenzoate as carbon sourcepOBE	quinate as carbon sourceQAT	gentisate as carbon sourceGTE	3-hydroxybenzoate as carbon sourcemOBE	benzoate as carbon sourceBAT	3-phenylpropionate as carbon sourcePPAT	m-coumarate as carbon sourceCMT	trigonelline as carbon sourceTGE	betaine as carbon sourceBET	putrescine as carbon sourcePCE	4-aminobutyrate as carbon sourceABT	histamine as carbon sourceHIN	DL-lactate as carbon sourceLAT	caprate as carbon sourceCAP	caprylate as carbon sourceCYT	L-histidine as carbon sourceHIS	succinate as carbon sourceSUC	fumarate as carbon sourceFUM	glutarate as carbon sourceGRE	DL-glycerate as carbon sourceGYT	5-aminovalerate as carbon sourceAVT	ethanolamine as carbon sourceETN	tryptamine as carbon sourceTTN	D-glucosamine as carbon sourceGLN	itaconate as carbon sourceITA	3-hydroxybutyrate as carbon source3OBU	L-aspartate as carbon sourceAPT	L-glutamate as carbon sourceGTT	L-proline as carbon sourcePRO	D-alanine as carbon sourceDALA	L-alanine as carbon sourceLALA	L-serine as carbon sourceSER	malonate as carbon sourceMNT	propionate as carbon sourcePROP	L-tyrosine as carbon sourceTYR	2-ketoglutarate as carbon source2KT
[Ref.: #120693]	156	not determinedn.d.	+	+	+	+	+	-	-	+	+	+	+	-	-	-	-	+	-	-	+	-	+	+	+	-	-	+	-	-	-	-	-	+	-	+	-	+	-	-	-	+	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	+	-	+	+	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	+	-	-	-	-	-	-	-	-	-	-	+	-

API® Coryne:

Note that the displayed test results represent raw data and therefore may deviate!

	API ID	Reduction of nitrateNIT	PyrazinamidasePYZ	Pyrrolidonyl arylamidasePYRA	Alkaline phosphatasePAL	beta-Glucuronidasebeta GUR	beta-Galactosidasebeta GAL	alpha-Glucosidasealpha GLU	N-Acetyl-beta-Glucosidasebeta NAG	Esculin hydrolysis/beta-GlucosidaseESC	Urease/urea hydrolysisURE	Gelatinase/gelatin hydrolysisGEL	Control fermentationControl	Fermentation of D-glucoseGLU	Fermentation of D-riboseRIB	Fermentation of D-xyloseXYL	Fermentation of D-mannitolMAN	Fermentation of maltoseMAL	Fermentation of lactoseLAC	Fermentation of sucroseSAC	Fermentation of glycogenGLYG	CatalaseCAT
[Ref.: #18424]	105	-	-	-	-	-	+	+	-	+	+	+	not determinedn.d.	-	-	-	-	-	-	-	-	not determinedn.d.

API® zym:

Note that the displayed test results represent raw data and therefore may deviate!

	API ID	Control	2-naphthyl phosphateAlkaline phosphatase	2-naphthyl butyrateEsterase (C 4)	2-naphtyl caprylateEsterase Lipase (C 8)	2-naphthyl myristateLipase (C 14)	L-leucyl-2-naphthylamideLeucine arylamidase	L-valyl-2-naphthylamideValine arylamidase	L-cystyl-2-naphthylamideCystine arylamidase	N-benzoyl-DL-arginine-2-naphthylamideTrypsin	N-glutaryl-phenylalanine-2-naphthylamidealpha- Chymotrypsin	2-naphthyl phosphateAcid phosphatase	Naphthol-AS-BI-phosphateNaphthol-AS-BI-phosphohydrolase	6-Br-2-naphthyl-alphaD-galactpyranosidealpha- Galactosidase	2-naphthyl-betaD-galactpyranosidebeta- Galactosidase	Naphthol-AS-BI-betaD-glucuronidebeta- Glucuronidase	2-naphthyl-alphaD-glucopyranosidealpha- Glucosidase	6-Br-2-naphthyl-betaD-glucopyranosidebeta- Glucosidase	1-naphthyl-N-acetyl-betaD-glucosaminideN-acetyl-beta- glucosaminidase	6-Br-2-naphthyl-alphaD-mannopyranosidealpha- Mannosidase	2-naphthyl-alphaL-fucopyranosidealpha- Fucosidase
[Ref.: #18424]	134	not determinedn.d.	-	+	+	-	+	+	-	-	-	-	-	-	+	-	+	+	-	+	-
[Ref.: #120693]	6880	-	-	+	+	-	+	+	+	+	-	+	+	+	+	-	+	+	-	+	-

Information on isolation source, the sampling and environmental conditions Isolation, sampling and environmental information

[Ref.: #8567]	Sample type/isolated from	soil

[Ref.: #67770]	Sample type/isolated from	Soil

[Ref.: #120693]	Sample type/isolated from	Environment, Soil
* marker position based on {}

Isolation sources categories

#Environmental

#Terrestrial

#Soil

What are isolation sources categories?

Information on possible application of the strain and its possible interaction with e.g. potential hosts Safety information

[Ref.: #18424]	Biosafety level	1	German classification
[Ref.: #8567]	Biosafety level	1	Risk group (German classification) According to TRBA 466
[Ref.: #120693]	Biosafety level	1	Risk group (French classification)

Information on genomic background e.g. entries in nucleic sequence databass Sequence information

16S Sequence information:

	Sequence accession description	Seq. accession number	Sequence length (bp)	Sequence database	Associated NCBI tax ID
[Ref.: #20218]	Microbacterium luteolum 16S rRNA gene	Y17235	1462	ENA	69367 tax ID	*
[Ref.: #20218]	Microbacterium luteolum gene for 16S rRNA, partial sequence	AB004718	1440	ENA	69367 tax ID	*

[Ref.: #8567]	GC-content	71.0 mol%	high performance liquid chromatography (HPLC)
[Ref.: #8567]	GC-content	75.6 mol%
[Ref.: #67770]	GC-content	70.6 mol%	high performance liquid chromatography (HPLC)

Availability in culture collections External links

[Ref.: #8567]

Culture collection no.

DSM 20143, ATCC 51474, IFO 15074, NBRC 15074, NCIB 9568, NRRL B-24230, JCM 9174, CCM 4365, CCUG 43281, CIP 102086, IAM 15204, LMG 16207, NCIMB 9568, VTT E-97042

[Ref.: #76825]

SI-ID 8204

Literature:

Topic	Title	Authors	Journal	DOI	Year
Enzymology	Gene cloning and characterization of two NADH-dependent 3-quinuclidinone reductases from Microbacterium luteolum JCM 9174.	Isotani K, Kurokawa J, Suzuki F, Nomoto S, Negishi T, Matsuda M, Itoh N	Appl Environ Microbiol	10.1128/AEM.03099-12	2012	*
Enzymology	Production of (R)-3-quinuclidinol by E. coli biocatalysts possessing NADH-dependent 3-quinuclidinone reductase (QNR or bacC) from Microbacterium luteolum and Leifsonia alcohol dehydrogenase (LSADH).	Isotani K, Kurokawa J, Itoh N	Int J Mol Sci	10.3390/ijms131013542	2012	*
Enzymology	Gene cloning and characterization of dihydrolipoamide dehydrogenase from Microbacterium luteolum: A useful enzymatic regeneration system of NAD+ from NADH.	Kurokawa J, Asano M, Nomoto S, Makino Y, Itoh N	J Biosci Bioeng	10.1016/j.jbiosc.2009.09.040	2010	*
Phylogeny	Microbacterium oleivorans sp. nov. and Microbacterium hydrocarbonoxydans sp. nov., novel crude-oil-degrading Gram-positive bacteria.	Schippers A, Bosecker K, Sproer C, Schumann P	Int J Syst Evol Microbiol	10.1099/ijs.0.63305-0	2005	*
Phylogeny	Proposal of six new species in the genus Aureobacterium and transfer of Flavobacterium esteraromaticum Omelianski to the genus Aureobacterium as Aureobacterium esteraromaticum comb. nov.	Yokota A, Takeuchi M, Sakane T, Weiss N	Int J Syst Bacteriol	10.1099/00207713-43-3-555	1993	*

References

#8567

Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 20143

#18424

Wink, J.: Compendium of Actinobacteria. HZI-Helmholtz-Centre for Infection Research, Braunschweig .

#20215

Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )

#20218

Verslyppe, B., De Smet, W., De Baets, B., De Vos, P., Dawyndt P.: StrainInfo introduces electronic passports for microorganisms.. Syst Appl Microbiol. 37: 42 - 50 2014 ( DOI 10.1016/j.syapm.2013.11.002 , PubMed 24321274 )

#40319 ; Curators of the CIP;
#67770 Japan Collection of Microorganism (JCM) ; Curators of the JCM;

#68379

Automatically annotated from API Coryne .

#68382

Automatically annotated from API zym .

#76825

Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.: StrainInfo: A central database for resolving microbial strain identifiers . ( DOI 10.60712/SI-ID8204.1 )

#120693 Collection of Institut Pasteur ; Curators of the CIP; CIP 102086
* These data were automatically processed and therefore are not curated

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