Name: Frigoribacterium faeni 801
Creator: BacDive
License: http://creativecommons.org/licenses/by-nc/4.0/

Strain identifier

BacDive ID: 7325

Type strain:

Species: Frigoribacterium faeni

Strain Designation: 801

Culture col. no.: DSM 10309, ATCC BAA-3, JCM 11265, KCTC 39911, CIP 107823, IAM 15122, NBRC 103066, VKM Ac-2505

Strain history: CIP <- 2003, P. Kämpfer, Giessen Univ., Giessen, Germany: strain 801

NCBI tax ID(s): 145483 (species)

SI-ID 44247

ATCC BAA-3, DSM 10309, JCM 11265, CIP 107823, VKM Ac-2505, IAM 15122, LMG 23384, NBRC 103066

Other strains from Frigoribacterium faeni

F. faeni 227, DSM 10310
F. faeni 301, DSM 10311

Section

Frigoribacterium faeni 801 is a psychrophilic, Gram-positive, motile bacterium that was isolated from hay dust.

Gram-positive
motile
rod-shaped
psychrophilic
16S sequence
Bacteria
genome sequence

Information on the name and the taxonomic classification. Name and taxonomic classification

	Last LPSN update	14-12-2023 (DD-MM-YYYY)
	Domain	"Bacteria"
	Phylum	*Actinomycetota*
	Class	*Actinomycetes*
	Order	*Micrococcales*
	Family	*Microbacteriaceae*
	Genus	*Frigoribacterium*
	Species	**Frigoribacterium faeni**
	Full Scientific Name (LPSN)	Frigoribacterium faeni Kämpfer et al. 2000

Information on morphological and physiological properties Morphology

[Ref.: #119270]	Gram stain	positive

[Ref.: #119270]	Cell shape	rod-shaped

[Ref.: #119270]	Motility	yes

[Ref.: #18353]	Colony color	Zinc yellow (1018)
[Ref.: #18353]	Incubation period	10-14 days
[Ref.: #18353]	Cultivation medium used	ISP 2

[Ref.: #18353]	Colony color	Zinc yellow (1018)
[Ref.: #18353]	Incubation period	10-14 days
[Ref.: #18353]	Cultivation medium used	ISP 3

[Ref.: #18353]	Colony color	Zinc yellow (1018)
[Ref.: #18353]	Incubation period	10-14 days
[Ref.: #18353]	Cultivation medium used	ISP 4

[Ref.: #18353]	Colony color	Zinc yellow (1018)
[Ref.: #18353]	Incubation period	10-14 days
[Ref.: #18353]	Cultivation medium used	ISP 5

[Ref.: #18353]	Colony color	Zinc yellow (1018)
[Ref.: #18353]	Incubation period	10-14 days
[Ref.: #18353]	Cultivation medium used	ISP 6

[Ref.: #18353]	Colony color	Zinc yellow (1018)
[Ref.: #18353]	Incubation period	10-14 days
[Ref.: #18353]	Cultivation medium used	ISP 7

[Ref.: #18353]	Multicellular complex forming ability	no
[Ref.: #18353]	Medium Name (multicellularity)	ISP 2

[Ref.: #18353]	Multicellular complex forming ability	no
[Ref.: #18353]	Medium Name (multicellularity)	ISP 3

[Ref.: #18353]	Multicellular complex forming ability	no
[Ref.: #18353]	Medium Name (multicellularity)	ISP 4

[Ref.: #18353]	Multicellular complex forming ability	no
[Ref.: #18353]	Medium Name (multicellularity)	ISP 5

[Ref.: #18353]	Multicellular complex forming ability	no
[Ref.: #18353]	Medium Name (multicellularity)	ISP 6

[Ref.: #18353]	Multicellular complex forming ability	no
[Ref.: #18353]	Medium Name (multicellularity)	ISP 7

Information on culture and growth conditions Culture and growth conditions

[Ref.: #3896]

Culture medium

TRYPTICASE SOY YEAST EXTRACT MEDIUM (DSMZ Medium 92)

[Ref.: #3896]

Culture medium growth

[Ref.: #3896]

Culture medium link

Medium recipe at MediaDive

[Ref.: #3896]

Culture medium composition

expand / minimize

[Ref.: #18353]

Culture medium

ISP 2

[Ref.: #18353]

Culture medium growth

[Ref.: #18353]

Culture medium composition

expand / minimize

[Ref.: #18353]

Culture medium

ISP 3

[Ref.: #18353]

Culture medium growth

[Ref.: #18353]

Culture medium composition

expand / minimize

[Ref.: #18353]

Culture medium

ISP 4

[Ref.: #18353]

Culture medium growth

[Ref.: #18353]

Culture medium composition

expand / minimize

[Ref.: #18353]

Culture medium

ISP 5

[Ref.: #18353]

Culture medium growth

[Ref.: #18353]

Culture medium composition

expand / minimize

[Ref.: #18353]

Culture medium

ISP 6

[Ref.: #18353]

Culture medium growth

[Ref.: #18353]

Culture medium composition

expand / minimize

[Ref.: #18353]

Culture medium

ISP 7

[Ref.: #18353]

Culture medium growth

[Ref.: #18353]

Culture medium composition

expand / minimize

[Ref.: #40723]

Culture medium

MEDIUM 72- for trypto casein soja agar

[Ref.: #40723]

Culture medium growth

[Ref.: #40723]

Culture medium composition

expand / minimize

[Ref.: #119270]

Culture medium

CIP Medium 72

[Ref.: #119270]

Culture medium growth

[Ref.: #119270]

Culture medium link

Medium recipe provided by DSMZ

	Kind of temperature		Temperature
[Ref.: #3896]		growth	10 °C
[Ref.: #18353]		optimum	20 °C
[Ref.: #40723]		growth	20 °C
[Ref.: #67770]		growth	25 °C
[Ref.: #119270]		growth	10-30 °C
[Ref.: #119270]	no	growth	37 °C
[Ref.: #119270]	no	growth	41 °C
[Ref.: #119270]	no	growth	45 °C

[Ref.: #3896]	Temperature range	psychrophilic
[Ref.: #18353]	Temperature range	psychrophilic
[Ref.: #40723]	Temperature range	psychrophilic
[Ref.: #67770]	Temperature range	mesophilic
[Ref.: #119270]	Temperature range	mesophilic
[Ref.: #119270]	Temperature range	thermophilic

Information on physiology and metabolism Physiology and metabolism

	Salt	Tested relation		Salt conc.
[Ref.: #119270]	NaCl		growth	0-6	%
[Ref.: #119270]	NaCl	no	growth	8	%
[Ref.: #119270]	NaCl	no	growth	10	%

[Ref.: #3896]	Murein short key	B14
[Ref.: #3896]	Murein types	B2ß {Gly} [L-Hsr] D-Glu-D-Lys

[Ref.: #67770]

Observation

quinones: MK-9

	Metabolite	Utilization activity	Kind of utilization tested
[Ref.: #18353]	arabinose ChEBI	+
[Ref.: #68368]	arginine ChEBI	-	hydrolysis	* from API 20E
[Ref.: #18353]	cellulose ChEBI	-
[Ref.: #119270]	citrate ChEBI	-	carbon source
[Ref.: #68368]	citrate ChEBI	-	assimilation	* from API 20E
[Ref.: #68379]	D-glucose ChEBI	-	fermentation	* from API Coryne
[Ref.: #68379]	D-mannitol ChEBI	-	fermentation	* from API Coryne
[Ref.: #68379]	D-ribose ChEBI	-	fermentation	* from API Coryne
[Ref.: #68379]	D-xylose ChEBI	-	fermentation	* from API Coryne
[Ref.: #119270]	esculin ChEBI	+	hydrolysis
[Ref.: #68379]	esculin ChEBI	+	hydrolysis	* from API Coryne
[Ref.: #18353]	fructose ChEBI	+
[Ref.: #68368]	gelatin ChEBI	-	hydrolysis	* from API 20E, API Coryne
[Ref.: #18353]	glucose ChEBI	+
[Ref.: #68379]	glycogen ChEBI	-	fermentation	* from API Coryne
[Ref.: #119270]	hippurate ChEBI	+	hydrolysis
[Ref.: #68379]	lactose ChEBI	-	fermentation	* from API Coryne
[Ref.: #68368]	lysine ChEBI	-	degradation	* from API 20E
[Ref.: #68379]	maltose ChEBI	-	fermentation	* from API Coryne
[Ref.: #18353]	mannitol ChEBI	+
[Ref.: #18353]	myo-inositol ChEBI	-
[Ref.: #119270]	nitrate ChEBI	-	reduction
[Ref.: #119270]	nitrate ChEBI	-	respiration
[Ref.: #68379]	nitrate ChEBI	-	reduction	* from API Coryne
[Ref.: #119270]	nitrite ChEBI	-	reduction
[Ref.: #68368]	ornithine ChEBI	-	degradation	* from API 20E
[Ref.: #18353]	raffinose ChEBI	+
[Ref.: #18353]	rhamnose ChEBI	+
[Ref.: #18353]	sucrose ChEBI	+
[Ref.: #68379]	sucrose ChEBI	-	fermentation	* from API Coryne
[Ref.: #68368]	tryptophan ChEBI	-	energy source	* from API 20E
[Ref.: #68368]	urea ChEBI	-	hydrolysis	* from API 20E, API Coryne
[Ref.: #18353]	xylose ChEBI	+
	Only first 10 entries are displayed. Click here to see all.

	Antibiotica	Metabolite	Antibiotic sensitivity	Antibiotic resistance
[Ref.: #119270]		0129 (2,4-Diamino-6,7-di-iso-propylpteridine phosphate)	yes	no

	Metabolite	Production
[Ref.: #119270]	indole ChEBI	no
[Ref.: #68368]	acetoin ChEBI	yes	* from API 20E
[Ref.: #68368]	hydrogen sulfide ChEBI	no	* from API 20E
[Ref.: #68368]	indole ChEBI	no	* from API 20E

	Metabolite	Voges-Proskauer-test	Methylred-test	Indole test
[Ref.: #119270]	acetoin ChEBI	-
[Ref.: #119270]	glucose ChEBI		-
[Ref.: #68368]	acetoin ChEBI	+			* from API 20E
[Ref.: #68368]	indole ChEBI			-	* from API 20E

	Enzyme	Enzyme activity	EC number
[Ref.: #119270]	alcohol dehydrogenase	-	1.1.1.1
[Ref.: #68379]	alkaline phosphatase	+	3.1.3.1	* from API Coryne
[Ref.: #68382]	alpha-chymotrypsin	-	3.4.21.1	* from API zym
[Ref.: #68382]	alpha-fucosidase	-	3.2.1.51	* from API zym
[Ref.: #68382]	alpha-galactosidase	+	3.2.1.22	* from API zym
[Ref.: #68382]	alpha-glucosidase	+	3.2.1.20	* from API zym, API Coryne
[Ref.: #68382]	alpha-mannosidase	-	3.2.1.24	* from API zym
[Ref.: #119270]	amylase	+
[Ref.: #68368]	arginine dihydrolase	-	3.5.3.6	* from API 20E
[Ref.: #119270]	beta-galactosidase	+	3.2.1.23
[Ref.: #68382]	beta-galactosidase	+	3.2.1.23	* from API zym, API Coryne, API 20E
[Ref.: #68382]	beta-glucosidase	+	3.2.1.21	* from API zym, API Coryne
[Ref.: #68382]	beta-glucuronidase	-	3.2.1.31	* from API zym, API Coryne
[Ref.: #119270]	caseinase	+	3.4.21.50
[Ref.: #119270]	catalase	+	1.11.1.6
[Ref.: #119270]	DNase	-
[Ref.: #68382]	esterase lipase (C 8)	+		* from API zym
[Ref.: #119270]	gamma-glutamyltransferase	-	2.3.2.2
[Ref.: #119270]	gelatinase	+/-
[Ref.: #68379]	gelatinase	-		* from API Coryne, API 20E
[Ref.: #119270]	lecithinase	-
[Ref.: #68382]	leucine arylamidase	+	3.4.11.1	* from API zym
[Ref.: #119270]	lipase	-
[Ref.: #68382]	lipase (C 14)	-		* from API zym
[Ref.: #119270]	lysine decarboxylase	-	4.1.1.18
[Ref.: #68368]	lysine decarboxylase	-	4.1.1.18	* from API 20E
[Ref.: #68382]	N-acetyl-beta-glucosaminidase	-	3.2.1.52	* from API zym, API Coryne
[Ref.: #68382]	naphthol-AS-BI-phosphohydrolase	-		* from API zym
[Ref.: #119270]	ornithine decarboxylase	-	4.1.1.17
[Ref.: #68368]	ornithine decarboxylase	-	4.1.1.17	* from API 20E
[Ref.: #119270]	oxidase	-
[Ref.: #119270]	phenylalanine ammonia-lyase	-	4.3.1.24
[Ref.: #119270]	protease	+
[Ref.: #68379]	pyrazinamidase	+	3.5.1.B15	* from API Coryne
[Ref.: #68379]	pyrrolidonyl arylamidase	-	3.4.19.3	* from API Coryne
[Ref.: #119270]	tryptophan deaminase	-
[Ref.: #68368]	tryptophan deaminase	-	4.1.99.1	* from API 20E
[Ref.: #119270]	tween esterase	+
[Ref.: #119270]	urease	-	3.5.1.5
[Ref.: #68379]	urease	-	3.5.1.5	* from API Coryne, API 20E
	Only first 10 entries are displayed. Click here to see all.

API® 20E:

Note that the displayed test results represent raw data and therefore may deviate!

	API ID	beta-GalactosidaseONPG	Arginine dihydrolaseADH (Arg)	Lysine decarboxylaseLDC (Lys)	Ornithine decarboxylaseODC	Citrate utilizationCIT	H2S productionH2S	Urease/urea hydrolysisURE	Tryptophan deaminaseTDA (Trp)	Indole productionIND	Acetoin production (Voges Proskauer test)VP	Gelatinase/gelatin hydrolysisGEL	Fermentation/oxidation of D-glucoseGLU	Fermentation/oxidation of D-mannitolMAN	Fermentation/oxidation of inositolINO	Fermentation/oxidation of sorbitolSor	Fermentation/oxidation of L-rhamnoseRHA	Fermentation/oxidation of sucroseSAC	Fermentation/oxidation of melibioseMEL	Fermentation/oxidation of amygdalinAMY	Fermentation/oxidation of L-arabinoseARA	Cytochrome oxidaseOX	Nitrite productionNO2	Reduction to N2N2	MotilityMOB	Growth on MacConkey mediumMAC	Oxidative catabolisation of D-glucoseOF-O	Fermentation of D-glucoseOF-F
[Ref.: #18353]	4	+	-	-	-	-	-	-	-	-	+	-	not determinedn.d.	not determinedn.d.	not determinedn.d.	not determinedn.d.	not determinedn.d.	not determinedn.d.	not determinedn.d.	not determinedn.d.	not determinedn.d.	not determinedn.d.	not determinedn.d.	not determinedn.d.	not determinedn.d.	not determinedn.d.	not determinedn.d.	not determinedn.d.

API® Biotype100:

Note that the displayed test results represent raw data and therefore may deviate!

	API ID	ControlQ	D-glucose as carbon sourceGLU	D-fructose as carbon sourceFRU	D-galactose as carbon sourceGAL	D-trehalose as carbon sourceTRE	D-mannose as carbon sourceMNE	L-sorbose as carbon sourceSBE	D-melibiose as carbon sourceMEL	sucrose as carbon sourceSAC	D-raffinose as carbon sourceRAF	maltotriose as carbon sourceMTE	maltose as carbon sourceMAL	lactose as carbon sourceLAC	lactulose as carbon sourceLTE	1-O-methyl-beta-galactopyranoside as carbon sourceMbGa	1-O-methyl-alpha-galactopyranoside as carbon sourceMaGa	D-cellobiose as carbon sourceCEL	gentiobiose as carbon sourceGEN	1-O-methyl-beta-D-glucopyranoside as carbon sourceMbGu	esculin as carbon sourceESC	D-ribose as carbon sourceRIB	L-arabinose as carbon sourceARA	D-xylose as carbon sourceXYL	palatinose as carbon sourcePLE	L-rhamnose as carbon sourceRHA	L-fucose as carbon sourceFUC	D-melezitose as carbon sourceMLZ	D-arabitol as carbon sourceDARL	L-arabitol as carbon sourceLARL	xylitol as carbon sourceXLT	dulcitol as carbon sourceDUL	D-tagatose as carbon sourceTAG	glycerol as carbon sourceGLY	myo-inositol as carbon sourceINO	D-mannitol as carbon sourceMAN	maltitol as carbon sourceMTL	D-turanose as carbon sourceTUR	D-sorbitol as carbon sourceSOR	adonitol as carbon sourceADO	hydroxyquinoline-beta-glucuronide as carbon sourceHBG	D-lyxose as carbon sourceLYX	i-erythritol as carbon sourceERY	1-O-methyl-alpha-D-glucoside as carbon sourceMDG	3-O-methyl-D-glucose as carbon source3MDG	D-saccharate as carbon sourceSAT	mucate as carbon sourceMUC	L-tartrate as carbon sourceLTAT	D-tartrate as carbon sourceDTAT	meso-tartrate as carbon sourceMTAT	D-malate as carbon sourceDMLT	L-malate as carbon sourceLMLT	cis-aconitate as carbon sourceCATE	trans-aconitate as carbon sourceTATE	tricarballylate as carbon sourceTTE	citrate as carbon sourceCIT	D-glucuronate as carbon sourceGRT	D-galacturonate as carbon sourceGAT	2-ketogluconate as carbon source2KG	5-ketogluconate as carbon source5KG	tryptophan as carbon sourceTRY	N-acetyl-D-glucosamine as carbon sourceNAG	D-gluconate as carbon sourceGNT	phenylacetate as carbon sourcePAC	protocatechuate as carbon sourcePAT	4-hydroxybenzoate as carbon sourcepOBE	quinate as carbon sourceQAT	gentisate as carbon sourceGTE	3-hydroxybenzoate as carbon sourcemOBE	benzoate as carbon sourceBAT	3-phenylpropionate as carbon sourcePPAT	m-coumarate as carbon sourceCMT	trigonelline as carbon sourceTGE	betaine as carbon sourceBET	putrescine as carbon sourcePCE	4-aminobutyrate as carbon sourceABT	histamine as carbon sourceHIN	DL-lactate as carbon sourceLAT	caprate as carbon sourceCAP	caprylate as carbon sourceCYT	L-histidine as carbon sourceHIS	succinate as carbon sourceSUC	fumarate as carbon sourceFUM	glutarate as carbon sourceGRE	DL-glycerate as carbon sourceGYT	5-aminovalerate as carbon sourceAVT	ethanolamine as carbon sourceETN	tryptamine as carbon sourceTTN	D-glucosamine as carbon sourceGLN	itaconate as carbon sourceITA	3-hydroxybutyrate as carbon source3OBU	L-aspartate as carbon sourceAPT	L-glutamate as carbon sourceGTT	L-proline as carbon sourcePRO	D-alanine as carbon sourceDALA	L-alanine as carbon sourceLALA	L-serine as carbon sourceSER	malonate as carbon sourceMNT	propionate as carbon sourcePROP	L-tyrosine as carbon sourceTYR	2-ketoglutarate as carbon source2KT
[Ref.: #119270]	2453	not determinedn.d.	+	+	+	+	+	-	+	+	+	+	+	-	-	-	-	-	-	-	+	+	+	+	+	+	-	-	+	+	+	-	-	+	-	+	-	+	-	+	-	-	+	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	+	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-

API® Coryne:

Note that the displayed test results represent raw data and therefore may deviate!

	API ID	Reduction of nitrateNIT	PyrazinamidasePYZ	Pyrrolidonyl arylamidasePYRA	Alkaline phosphatasePAL	beta-Glucuronidasebeta GUR	beta-Galactosidasebeta GAL	alpha-Glucosidasealpha GLU	N-Acetyl-beta-Glucosidasebeta NAG	Esculin hydrolysis/beta-GlucosidaseESC	Urease/urea hydrolysisURE	Gelatinase/gelatin hydrolysisGEL	Control fermentationControl	Fermentation of D-glucoseGLU	Fermentation of D-riboseRIB	Fermentation of D-xyloseXYL	Fermentation of D-mannitolMAN	Fermentation of maltoseMAL	Fermentation of lactoseLAC	Fermentation of sucroseSAC	Fermentation of glycogenGLYG	CatalaseCAT
[Ref.: #18353]	42	-	+	-	+	-	+	+	-	+	-	-	not determinedn.d.	-	-	-	-	-	-	-	-	not determinedn.d.

API® zym:

Note that the displayed test results represent raw data and therefore may deviate!

	API ID	Control	2-naphthyl phosphateAlkaline phosphatase	2-naphthyl butyrateEsterase (C 4)	2-naphtyl caprylateEsterase Lipase (C 8)	2-naphthyl myristateLipase (C 14)	L-leucyl-2-naphthylamideLeucine arylamidase	L-valyl-2-naphthylamideValine arylamidase	L-cystyl-2-naphthylamideCystine arylamidase	N-benzoyl-DL-arginine-2-naphthylamideTrypsin	N-glutaryl-phenylalanine-2-naphthylamidealpha- Chymotrypsin	2-naphthyl phosphateAcid phosphatase	Naphthol-AS-BI-phosphateNaphthol-AS-BI-phosphohydrolase	6-Br-2-naphthyl-alphaD-galactpyranosidealpha- Galactosidase	2-naphthyl-betaD-galactpyranosidebeta- Galactosidase	Naphthol-AS-BI-betaD-glucuronidebeta- Glucuronidase	2-naphthyl-alphaD-glucopyranosidealpha- Glucosidase	6-Br-2-naphthyl-betaD-glucopyranosidebeta- Glucosidase	1-naphthyl-N-acetyl-betaD-glucosaminideN-acetyl-beta- glucosaminidase	6-Br-2-naphthyl-alphaD-mannopyranosidealpha- Mannosidase	2-naphthyl-alphaL-fucopyranosidealpha- Fucosidase
[Ref.: #18353]	63	not determinedn.d.	+	-	+	-	+	+	+	+	-	+	-	+	+	-	+	+	-	-	-
[Ref.: #119270]	10677	-	-	+	+	-	+	-	-	-	-	-	-	+	+	-	+	+	-	-	-

Information on isolation source, the sampling and environmental conditions Isolation, sampling and environmental information

[Ref.: #3896]	Sample type/isolated from	hay dust
[Ref.: #3896]	Country	Finland
[Ref.: #3896]	Country ISO 3 Code	FIN
[Ref.: #3896]	Continent	Europe

[Ref.: #67770]	Sample type/isolated from	Airborne dust in a cattle barn
[Ref.: #67770]	Geographic location (country and/or sea, region)	Southern Finland
[Ref.: #67770]	Country	Finland
[Ref.: #67770]	Country ISO 3 Code	FIN
[Ref.: #67770]	Continent	Europe

[Ref.: #119270]	Sample type/isolated from	Environment, Indoor dust in a cow shed
[Ref.: #119270]	Country	Finland
[Ref.: #119270]	Country ISO 3 Code	FIN
[Ref.: #119270]	Continent	Europe
* marker position based on {}

Isolation sources categories

#Environmental	#Terrestrial	#Dust
#Host	#Plants	#Herbaceous plants (Grass,Crops)

What are isolation sources categories?

[Ref.: #69479]

Global distribution of 16S sequence Y18807 (>99% sequence identity) for Microbacteriaceae from Microbeatlas

Aquatic Samples	1587
Soil Samples	4109
Animal Samples	4245
Plant Samples	4185
Total Samples	14126

Information on possible application of the strain and its possible interaction with e.g. potential hosts Safety information

[Ref.: #18353]	Biosafety level	1	German classification
[Ref.: #3896]	Biosafety level	1	Risk group (German classification) According to TRBA 466
[Ref.: #119270]	Biosafety level	1	Risk group (French classification)

Information on genomic background e.g. entries in nucleic sequence databass Sequence information

16S Sequence information:

	Sequence accession description	Seq. accession number	Sequence length (bp)	Sequence database	Associated NCBI tax ID
[Ref.: #3896]	Frigoribacter sp. 801 16S rRNA gene, partial	Y18807	1467	ENA	145483 tax ID
[Ref.: #20218]	Frigoribacterium faeni partial 16S rRNA gene, type strain DSM 10309	AM410686	1467	ENA	145483 tax ID	*

Genome sequence information:

	Sequence accession description	Seq. accession number	Assembly level	Sequence database	Associated NCBI tax ID
[Ref.: #66792]	Frigoribacterium faeni NBRC 103066	GCA_007988805	contig	GenBank	145483 tax ID	*
[Ref.: #66792]	Frigoribacterium faeni DSM 10309	GCA_014137965	contig	GenBank	145483 tax ID	*
[Ref.: #66792]	Frigoribacterium faeni strain DSM 10309	145483.7	wgs	PATRIC	145483 tax ID	*
[Ref.: #66792]	Frigoribacterium faeni strain NBRC 103066	145483.3	wgs	PATRIC	145483 tax ID	*
[Ref.: #66792]	Frigoribacterium faeni DSM 10309	2820973839	draft	JGI IMG/M	145483 tax ID	*

[Ref.: #3896]

GC-content

71.1 mol%

high performance liquid chromatography (HPLC)

Data predicted using genome information as a basis Genome-based predictions

	Trait	Prediction	Confidence in %	In training data
	Predictions from Diaspora project based on: Frigoribacterium faeni strain DSM 10309 PATRIC: 145483.7
[Ref.: #69480]	motile	yes	51.915	no
[Ref.: #69480]	gram-positive	yes	93.029	no
[Ref.: #69480]	anaerobic	no	99.558	no
[Ref.: #69480]	halophile	no	76.788	no
[Ref.: #69480]	spore-forming	no	92.715	no
[Ref.: #69480]	glucose-util	yes	89.382	yes
[Ref.: #69480]	thermophile	no	99.58	no
[Ref.: #69480]	aerobic	yes	93.319	no
[Ref.: #69480]	flagellated	no	93.271	no
[Ref.: #69480]	glucose-ferment	no	87.802	yes

Availability in culture collections External links

[Ref.: #3896]

Culture collection no.

DSM 10309, ATCC BAA-3, JCM 11265, KCTC 39911, CIP 107823, IAM 15122, NBRC 103066, VKM Ac-2505

[Ref.: #76775]

SI-ID 44247

Literature:

Topic	Title	Authors	Journal	DOI	Year
Phylogeny	Frigoribacterium endophyticum sp. nov., an endophytic actinobacterium isolated from the root of Anabasis elatior (C. A. Mey.) Schischk.	Wang HF, Zhang YG, Chen JY, Guo JW, Li L, Hozzein WN, Zhang YM, Wadaan MAM, Li WJ	Int J Syst Evol Microbiol	10.1099/ijs.0.000081	2015	*
Phylogeny	Glaciihabitans tibetensis gen. nov., sp. nov., a psychrotolerant bacterium of the family Microbacteriaceae, isolated from glacier ice water.	Li AH, Liu HC, Xin YH, Kim SG, Zhou YG	Int J Syst Evol Microbiol	10.1099/ijs.0.052670-0	2013	*
Phylogeny	Frigoribacterium mesophilum sp. nov., a mesophilic actinobacterium isolated from Bigeum Island, Korea.	Dastager SG, Lee JC, Ju YJ, Park DJ, Kim CJ	Int J Syst Evol Microbiol	10.1099/ijs.0.65637-0	2008	*
Phylogeny	Frigoribacterium faeni gen. nov., sp. nov., a novel psychrophilic genus of the family Microbacteriaceae.	Kampfer P, Rainey FA, Andersson MA, Nurmiaho Lassila EL, Ulrych U, Busse HJ, Weiss N, Mikkola R, Salkinoja-Salonen M	Int J Syst Evol Microbiol	10.1099/00207713-50-1-355	2000	*

References

#3896

Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 10309

#18353

Wink, J.: Compendium of Actinobacteria. HZI-Helmholtz-Centre for Infection Research, Braunschweig .

#20215

Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )

#20218

Verslyppe, B., De Smet, W., De Baets, B., De Vos, P., Dawyndt P.: StrainInfo introduces electronic passports for microorganisms.. Syst Appl Microbiol. 37: 42 - 50 2014 ( DOI 10.1016/j.syapm.2013.11.002 , PubMed 24321274 )

#40723 ; Curators of the CIP;

#66792

Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

#67770 Japan Collection of Microorganism (JCM) ; Curators of the JCM;

#68368

Automatically annotated from API 20E .

#68379

Automatically annotated from API Coryne .

#68382

Automatically annotated from API zym .

#69479

João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta .

#69480

Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Predictions based on genome sequence made in the Diaspora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

#76775

Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.: StrainInfo: A central database for resolving microbial strain identifiers . ( DOI 10.60712/SI-ID44247.1 )

#119270 Collection of Institut Pasteur ; Curators of the CIP; CIP 107823
* These data were automatically processed and therefore are not curated

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Frigoribacterium faeni strain DSM 10309

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