Muricoccus vinaceus (DSM 19362, CCM 7468, KCTC 22045)

Name: Muricoccus vinaceus (DSM 19362, CCM 7468, KCTC 22045)
Creator: BacDive
License: http://creativecommons.org/licenses/by/4.0/

BacDive ID 73

Type strain

Culture col. no. DSM 19362 CCM 7468 KCTC 22045 CPCC 100056 UCCCB25

NCBI tax ID(s) 1123064 424704

Special Collections DSMZ KCTC Literature strains UCCCB

History <- Y.-Q. Zhang, Inst. Med. Biotechnol., Chinese Academy of Med. Sci. and Peking Union Med. College, Beijing; CPCC 100056 <- Y.-Q. Zhang et al. Zhang Y.-Q. Chinese Academy of Medical Sciences and Peking Union Medical College

Links

Muricoccus vinaceus DSM 19362 is an aerobe, Gram-negative, rod-shaped bacterium that forms circular colonies and was isolated from forest soil.

Gram-negative rod-shaped colony-forming aerobe 16S sequence Bacteria

Name and taxonomic classification

SI-ID 396875

KCTC 22045,DSM 19362

@ref 20215

Last LPSN update 2026-02-09 11:17:47

Domain Bacteria

Phylum Pseudomonadota

Class Alphaproteobacteria

Order Rhodospirillales

Family Acetobacteraceae

Genus Muricoccus

Species Muricoccus vinaceus

Full scientific name Muricoccus vinaceus (Zhang et al. 2008) Liu and Xin 2025

Synonyms (2)

Roseomonas vinacea
Pararoseomonas vinacea

Morphology

Cell morphology

@ref	Gram stain	Cell length	Cell width	Cell shape	Motility	Confidence
22960	negative	0.9-2.2 µm	0.9-1.0 µm	rod-shaped
125439	negative					98.2

Colony morphology

@ref	Colony size	Colony color	Colony shape	Incubation period	Medium used
22960	0.7-1.0 mm	opaque	circular	3 days	ISP2 agar

Culture and growth conditions

Culture medium

@ref	Name	Medium link	Composition
8073	R2A MEDIUM (DSMZ Medium 830)	Medium recipe at MediaDive	Name: R2A MEDIUM (DSMZ Medium 830) Composition: Agar 15.0 g/l Casamino acids 0.5 g/l Starch 0.5 g/l Glucose 0.5 g/l Proteose peptone 0.5 g/l Yeast extract 0.5 g/l K2HPO4 0.3 g/l Na-pyruvate 0.3 g/l MgSO4 x 7 H2O 0.05 g/l Distilled water
22960	ISP2
22960	ISP2 agar
22960	ISP5
22960	Reasoner's 2A agar (R2A)
22960	Tryptic Soy Agar

Culture temp

@ref	Growth	Type	Temperature (°C)
8073	positive	growth	28
22960	positive	growth	4.0-40.0
22960	positive	optimum	30.0-32.0
67772	positive	optimum	30-32
67772	positive	minimum	4
67772	positive	maximum	40

Culture pH

@ref	Ability	Type	PH
67772	positive	maximum	8.0
67772	positive	minimum	6.5
22960	positive	optimum	7.0-7.5
67772	positive	optimum	7.0-7.5
22960	positive	growth	6.5-8.0

Physiology and metabolism

Oxygen tolerance

@ref	Oxygen tolerance	Confidence
22960	aerobe
125439	obligate aerobe	96.7

Spore formation

22960

Spore formationno

Halophily

@ref	Salt	Growth	Tested relation	Concentration
22960	NaCl	positive	growth	<2.0 %

Metabolite utilization

@ref	Chebi-ID	Metabolite	Utilization activity	Kind of utilization tested
22960	16808 ChEBI	2-dehydro-D-gluconate	-	builds acid from
22960	17426 ChEBI	5-dehydro-D-gluconate	-	builds acid from
22960	27613 ChEBI	amygdalin	-	builds acid from
22960	18305 ChEBI	arbutin	-	builds acid from
22960		casein	-	hydrolysis
22960	17057 ChEBI	cellobiose	-	builds acid from
22960	17108 ChEBI	D-arabinose	-	builds acid from
22960	18333 ChEBI	D-arabitol	-	builds acid from
22960	15824 ChEBI	D-fructose	-	builds acid from
22960	28847 ChEBI	D-fucose	-	builds acid from
22960	12936 ChEBI	D-galactose	-	builds acid from
22960	12936 ChEBI	D-galactose	-	carbon source
22960	17634 ChEBI	D-glucose	+	carbon source
22960	62318 ChEBI	D-lyxose	-	builds acid from
22960	16899 ChEBI	D-mannitol	-	builds acid from
22960	16899 ChEBI	D-mannitol	+	carbon source
22960	16024 ChEBI	D-mannose	-	builds acid from
22960	16024 ChEBI	D-mannose	+	carbon source
22960	16988 ChEBI	D-ribose	+	carbon source
22960	17924 ChEBI	D-sorbitol	-	builds acid from
22960	16443 ChEBI	D-tagatose	-	builds acid from
22960	16551 ChEBI	D-trehalose	-	builds acid from
22960	65327 ChEBI	D-xylose	-	builds acid from
22960	65327 ChEBI	D-xylose	-	carbon source
22960	17113 ChEBI	erythritol	-	builds acid from
22960	4853 ChEBI	esculin	-	builds acid from
22960	4853 ChEBI	esculin	-	hydrolysis
22960	28757 ChEBI	fructose	-	carbon source
22960	16813 ChEBI	galactitol	-	builds acid from
22960	5291 ChEBI	gelatin	-	hydrolysis
22960	28066 ChEBI	gentiobiose	-	builds acid from
22960	24265 ChEBI	gluconate	-	builds acid from
22960	17234 ChEBI	glucose	-	fermentation
22960	17754 ChEBI	glycerol	-	builds acid from
22960	17754 ChEBI	glycerol	-	carbon source
22960	28087 ChEBI	glycogen	-	builds acid from
22960	15443 ChEBI	inulin	-	builds acid from
22960	30849 ChEBI	L-arabinose	+	carbon source
22960	18403 ChEBI	L-arabitol	-	builds acid from
22960	18287 ChEBI	L-fucose	-	builds acid from
22960	62345 ChEBI	L-rhamnose	+	carbon source
22960	17266 ChEBI	L-sorbose	-	builds acid from
22960	65328 ChEBI	L-xylose	-	builds acid from
22960	17716 ChEBI	lactose	-	builds acid from
22960	17306 ChEBI	maltose	-	builds acid from
22960	6731 ChEBI	melezitose	-	builds acid from
22960	28053 ChEBI	melibiose	-	builds acid from
22960	28053 ChEBI	melibiose	+	carbon source
22960	320061 ChEBI	methyl alpha-D-glucopyranoside	-	builds acid from
22960	43943 ChEBI	methyl alpha-D-mannoside	-	builds acid from
22960	74863 ChEBI	methyl beta-D-xylopyranoside	-	builds acid from
22960	17268 ChEBI	myo-inositol	-	builds acid from
22960	506227 ChEBI	N-acetylglucosamine	-	builds acid from
22960	17632 ChEBI	nitrate	+	reduction
22960	16301 ChEBI	nitrite	-	reduction
22960	16634 ChEBI	raffinose	-	builds acid from
22960	15963 ChEBI	ribitol	-	builds acid from
22960	33942 ChEBI	ribose	+	carbon source
22960	17814 ChEBI	salicin	-	builds acid from
22960	53258 ChEBI	sodium citrate	-	carbon source
22960	28017 ChEBI	starch	-	builds acid from
22960	28017 ChEBI	starch	-	hydrolysis
22960	17992 ChEBI	sucrose	-	builds acid from
22960	32528 ChEBI	turanose	-	builds acid from
22960	53424 ChEBI	tween 20	+	hydrolysis
22960	53426 ChEBI	tween 80	+	hydrolysis
22960	17151 ChEBI	xylitol	-	builds acid from

Antibiotic resistance

@ref	ChEBI	Metabolite
22960	2637	amikacin
22960	17698	chloramphenicol
22960	27644	chlortetracyclin
22960	100241	ciprofloxacin
22960	48923	erythromycin
22960	17833	gentamicin
22960	6104	kanamycin
22960	100147	nalidixic acid
22960	7528	netilmycin
22960	28368	novobiocin
22960	16869	oleandomycin
22960	27701	oxytetracycline
22960	18208	penicillin g
22960	8309	polymyxin b
22960	17076	streptomycin
22960	27902	tetracycline
22960	28864	tobramycin
22960	28001	vancomycin

Metabolite production

@ref	Chebi-ID	Metabolite
22960	15688 ChEBI	acetoin
22960	16136 ChEBI	hydrogen sulfide
22960	35581 ChEBI	indole
22960	89634 ChEBI	melanin

Metabolite tests

@ref	Chebi-ID	Metabolite	Voges-proskauer-test	Methylred-test
22960	15688 ChEBI	acetoin	-
22960	17234 ChEBI	glucose		-

Enzymes

@ref	Value	Activity	Ec
22960	acid phosphatase	-	3.1.3.2
22960	Alkaline phosphatase	+	3.1.3.1
22960	alpha-chymotrypsin	-	3.4.21.1
22960	alpha-fucosidase	-	3.2.1.51
22960	alpha-galactosidase	-	3.2.1.22
22960	alpha-glucosidase	-	3.2.1.20
22960	alpha-mannosidase	-	3.2.1.24
22960	arginine dihydrolase	-	3.5.3.6
22960	beta-galactosidase	-	3.2.1.23
22960	beta-glucosidase	-	3.2.1.21
22960	beta-glucuronidase	-	3.2.1.31
22960	catalase	+	1.11.1.6
22960	cystine arylamidase	+	3.4.11.3
22960	cytochrome oxidase	+	1.9.3.1
22960	DNase	-
22960	esterase (C 4)	+
22960	esterase lipase (C 8)	+
22960	leucine arylamidase	-	3.4.11.1
22960	lipase (C 14)	+
22960	N-acetyl-beta-glucosaminidase	-	3.2.1.52
22960	naphthol-AS-BI-phosphohydrolase	+
22960	trypsin	-	3.4.21.4
22960	urease	-	3.5.1.5
22960	valine arylamidase	-

Isolation, sampling and environmental information

Isolation source categories

Cat1	Cat2	Cat3
#Environmental	#Terrestrial	#Forest
#Environmental	#Terrestrial	#Soil

Isolation

@ref	Sample type	Sampling date	Geographic location	Country	Country ISO 3 Code	Continent	Enrichment culture	Enrichment culture duration	Enrichment culture temperature	Isolation procedure
8073	forest soil		Qinghai Province, Qinghai–Tibet plateau	China	CHN	Asia
22960	soil sample						ISP2 broth	5 days	32.0	shake flasks (about 150 r.p.m.)
67772	Forest soil	2005	Qinghai-Tibet plateau	China	CHN	Asia

Taxonmaps

69479

Global distribution of 16S sequence EF368368 (>99% sequence identity) for Roseomonas vinacea subclade from Microbeatlas

Aquatic Samples	415
Soil Samples	657
Animal Samples	1985
Plant Samples	330
Total Samples	3387

Interaction and safety

Risk assessment

@ref	Biosafety level	Biosafety level comment
8073	1	Risk group (German classification) According to TRBA 466
67772	1

Sequence information

Genome sequences

@ref	Description	Assembly level	IMG accession	NCBI tax ID	Score
66792	Roseomonas vinacea DSM 19362	complete	2574179773	1123064	71.53

16S sequences

@ref	Description	Accession	Length	Database	NCBI tax ID
8073	Roseomonas vinaceus strain CPCC 100056 16S ribosomal RNA gene, partial sequence	EF368368	1421		424704
124043	Roseomonas vinacea strain CCM 7468 16S ribosomal RNA gene, partial sequence.	MT760143	1318		424704

GC content

@ref	GC-content (mol%)	Method
8073	67.3
22960	67.3	thermal denaturation, midpoint method (Tm)

Genome-based predictions

Predictions

Predictions from Deep Learning for Genome Sequence Data. R package version 0.3.1 based on: Roseomonas vinacea DSM 19362
IMG: 2574179773

@ref	Trait	Model	Prediction	Confidence in %	In training data
125439	spore_formation	BacteriaNetⓘ	no	56.30	no
125439	motility	BacteriaNetⓘ	yes	61.50	no
125439	gram_stain	BacteriaNetⓘ	negative	98.20	no
125439	oxygen_tolerance	BacteriaNetⓘ	obligate aerobe	96.70	no

Literature

Topic	Title	Authors	Journal	DOI	Year
	Validation List no. 221: valid publication of new names and new combinations effectively published outside the IJSEM.	Oren A, Goker M.	Int J Syst Evol Microbiol	10.1099/ijsem.0.006562	2025
Phylogeny	Roseomonas terricola sp. nov., isolated from agricultural soil.	Kim DU, Lee H, Kim SG, Ka JO	Int J Syst Evol Microbiol	10.1099/ijsem.0.002389	2017
Phylogeny	Roseomonas aeriglobus sp. nov., isolated from an air-conditioning system.	Lee Y, Jeon CO	Antonie Van Leeuwenhoek	10.1007/s10482-017-0956-x	2017
Phylogeny	Roseomonas nepalensis sp. nov., isolated from oil-contaminated soil.	Chaudhary DK, Kim J	Int J Syst Evol Microbiol	10.1099/ijsem.0.001727	2017
Phylogeny	Roseomonas vinacea sp. nov., a Gram-negative coccobacillus isolated from a soil sample.	Zhang YQ, Yu LY, Wang D, Liu HY, Sun CH, Jiang W, Zhang YQ, Li WJ	Int J Syst Evol Microbiol	10.1099/ijs.0.65789-0	2008

References

#8073	Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 19362
#20215	Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )
#22960	Yu-Qin Zhang, Li-Yan Yu,Dong Wang,Hong-Yu Liu,Cheng-Hang Sun,Wei Jiang,Yue-Qin Zhang,Wen-Jun Li: Roseomonas vinacea sp. nov., a Gram-negative coccobacillus isolated from a soil sample. IJSEM 58: 2070 - 2074 2008 ( DOI 10.1099/ijs.0.65789-0 , PubMed 18768606 )
#66792	Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .
#67772	The University of Coimbra Bacteria Culture Collection (UCCCB) ; Curators of the UCCCB;
#69479	João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta .
#124043	Isabel Schober, Julia Koblitz: Data extracted from sequence databases, automatically matched based on designation and taxonomy .
#125439	Philipp Münch, René Mreches, Martin Binder, Hüseyin Anil Gündüz, Xiao-Yin To, Alice McHardy: deepG: Deep Learning for Genome Sequence Data. R package version 0.3.1 .
#126262	A. Lissin, I. Schober, J. F. Witte, H. Lüken, A. Podstawka, J. Koblitz, B. Bunk, P. Dawyndt, P. Vandamme, P. de Vos, J. Overmann, L. C. Reimer: StrainInfo—the central database for linked microbial strain identifiers. ( DOI 10.1093/database/baaf059 )

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Muricoccus vinaceus (DSM 19362, CCM 7468, KCTC 22045)

Name and taxonomic classification

Morphology

Cell morphology

Colony morphology

Culture and growth conditions

Culture medium

Culture temp

Culture pH

Physiology and metabolism

Oxygen tolerance

Spore formation

Halophily

Metabolite utilization

Antibiotic resistance

Metabolite production

Metabolite tests

Enzymes

Isolation, sampling and environmental information

Isolation source categories

Isolation

Taxonmaps

Interaction and safety

Risk assessment

Sequence information

Genome sequences

16S sequences

GC content

Genome-based predictions

Predictions

Literature

Literature

References

BacDive

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