Clavibacter michiganensis S 05 is a plant pathogen that was isolated from Lycopersicon lycopersicum.
plant pathogen genome sequence 16S sequence Bacteria
SI-ID 386953
| @ref 20215 |
|
Last LPSN update
2026-02-09 11:19:26 |
| Domain Bacteria |
| Phylum Actinomycetota |
| Class Actinomycetes |
| Order Micrococcales |
| Family Microbacteriaceae |
| Genus Clavibacter |
| Species Clavibacter michiganensis |
| Full scientific name Clavibacter michiganensis corrig. (Smith 1910) Davis et al. 1984 |
| Synonyms (3) |
| @ref | Name | Growth | Medium link | Composition | |
|---|---|---|---|---|---|
| 12537 | R2A MEDIUM (DSMZ Medium 830) | Medium recipe at MediaDive  | Name: R2A MEDIUM (DSMZ Medium 830) Composition: Agar 15.0 g/l Casamino acids 0.5 g/l Starch 0.5 g/l Glucose 0.5 g/l Proteose peptone 0.5 g/l Yeast extract 0.5 g/l K2HPO4 0.3 g/l Na-pyruvate 0.3 g/l MgSO4 x 7 H2O 0.05 g/l Distilled water | ||
| 12537 | TRYPTICASE SOY YEAST EXTRACT MEDIUM (DSMZ Medium 92) | Medium recipe at MediaDive | Name: TRYPTICASE SOY YEAST EXTRACT MEDIUM (DSMZ Medium 92) Composition: Trypticase soy broth 30.0 g/l Agar 15.0 g/l Yeast extract 3.0 g/l Distilled water |
Global distribution of 16S sequence X77435 (>99% sequence identity) for Clavibacter michiganensis from Microbeatlas 
 Aquatic Samples |
10493 |
 Soil Samples |
15732 |
 Animal Samples |
18473 |
 Plant Samples |
10075 |
| Total Samples | 54773 |
| @ref | Description | Assembly level | INSDC accession | BV-BRC accession | IMG accession | NCBI tax ID | Score | |
|---|---|---|---|---|---|---|---|---|
| 66792 | ASM2121665v1 assembly for Clavibacter michiganensis LMG7333 | complete | GCA_021216655   | 28447.208  | 8111637072  | 28447 | 96.99 |  |
| 67770 | IMG-taxon 2708742539 annotated assembly for Clavibacter michiganensis VKM Ac-1403 | scaffold | GCA_900168345 | 28447.139 | 2708742539 | 28447 | 75.19 | |
| 67770 | ASM224057v1 assembly for Clavibacter michiganensis subsp. michiganensis LMG 7333 | contig | GCA_002240575 | 33013.123 | 8117343506 | 33013 | 74.65 | |
| 67770 | ASM369729v1 assembly for Clavibacter michiganensis subsp. michiganensis CFBP 4999 | scaffold | GCA_003697295 | 33013.190 | 2846599232 | 33013 | 69.51 |
| @ref | Description | Accession | Length | Database | NCBI tax ID | |
|---|---|---|---|---|---|---|
| 20218 | Clavibacter michiganensis subsp. michiganensis partial 16S rRNA gene, type strain DSM 46364 | AM410696 | 1471 |  | 33013 | |
| 20218 | Clavibacter michiganensis subsp. michiganensis strain ICMP 2550 16S-23S ribosomal RNA intergenic spacer, partial sequence | FJ205139 | 516 | | 33013 | |
| 20218 | Clavibacter michiganensis subsp. michiganensis partial 16S rRNA gene, strain LMG7333T | FR728336 | 452 | | 33013 | |
| 20218 | Clavibacter michiganensis subsp. michiganensis strain LMG 7333 16S ribosomal RNA gene, partial sequence | JN603277 | 1359 | | 33013 | |
| 20218 | Clavibacter michiganensis subsp. michiganensis strain LMG 7333 16S ribosomal RNA gene and 16S-23S ribosomal RNA intergenic spacer, partial sequence | JN603289 | 773 | | 33013 | |
| 20218 | Clavibacter michiganensis michiganensis LGM 7333 16S-23S rRNA spacer region | U09380 | 481 | | 28447 | |
| 20218 | Clavibacter michiganensis michiganensis LMG 7333 16S rRNA | U09762 | 1491 | | 28447 | |
| 12537 | Clavibacter michiganensis strain DSM 46364 16S ribosomal RNA, partial sequence | NR_115040 | 1471 | | 28447 | |
| 67770 | C.michiganense (DSM 46364) 16S rRNA gene | X77435 | 1471 | | 28447 | |
| 124043 | Clavibacter michiganensis subsp. michiganensis strain PF008 16S ribosomal RNA gene, partial sequence. | JN603278 | 1359 | | 33013 | |
| 124043 | Clavibacter michiganensis subsp. michiganensis strain PF008 16S ribosomal RNA gene, partial sequence. | JN603279 | 1359 | | 33013 | |
| 124043 | Clavibacter michiganensis subsp. michiganensis strain PF008 16S ribosomal RNA gene, partial sequence. | JN603280 | 1359 | | 33013 | |
| 124043 | Clavibacter michiganensis subsp. michiganensis strain PF008 16S ribosomal RNA gene, partial sequence. | JN603281 | 1359 | | 33013 | |
| 124043 | Clavibacter michiganensis subsp. michiganensis strain PF008 16S ribosomal RNA gene, partial sequence. | JN603282 | 1359 | | 33013 | |
| 124043 | Clavibacter michiganensis subsp. michiganensis strain PF008 16S ribosomal RNA gene, partial sequence. | JN603283 | 1359 | | 33013 | |
| 124043 | Clavibacter michiganensis subsp. michiganensis strain PF008 16S ribosomal RNA gene, partial sequence. | JN603284 | 1359 | | 33013 | |
| 124043 | Clavibacter michiganensis subsp. michiganensis strain PF008 16S ribosomal RNA gene, partial sequence. | JN603285 | 1359 | | 33013 | |
| 124043 | Clavibacter michiganensis subsp. michiganensis strain PF008 16S ribosomal RNA gene, partial sequence. | JN603286 | 1359 | | 33013 | |
| 124043 | Clavibacter michiganensis subsp. michiganensis strain PF008 16S ribosomal RNA gene, partial sequence. | JN603287 | 1359 | | 33013 | |
| 124043 | Clavibacter michiganensis subsp. michiganensis strain PF008 16S ribosomal RNA gene, partial sequence. | JN603288 | 1359 | | 33013 | |
| 124043 | Clavibacter michiganensis subsp. michiganensis strain PF008 16S ribosomal RNA gene and 16S-23S ribosomal RNA intergenic spacer, partial sequence. | JN603290 | 773 | | 33013 | |
| 124043 | Clavibacter michiganensis subsp. michiganensis strain PF008 16S ribosomal RNA gene and 16S-23S ribosomal RNA intergenic spacer, partial sequence. | JN603291 | 773 | | 33013 | |
| 124043 | Clavibacter michiganensis subsp. michiganensis strain PF008 16S ribosomal RNA gene and 16S-23S ribosomal RNA intergenic spacer, partial sequence. | JN603292 | 773 | | 33013 | |
| 124043 | Clavibacter michiganensis subsp. michiganensis strain PF008 16S ribosomal RNA gene and 16S-23S ribosomal RNA intergenic spacer, partial sequence. | JN603293 | 773 | | 33013 | |
| 124043 | Clavibacter michiganensis subsp. michiganensis strain PF008 16S ribosomal RNA gene and 16S-23S ribosomal RNA intergenic spacer, partial sequence. | JN603294 | 773 | | 33013 | |
| 124043 | Clavibacter michiganensis subsp. michiganensis strain PF008 16S ribosomal RNA gene and 16S-23S ribosomal RNA intergenic spacer, partial sequence. | JN603295 | 773 | | 33013 | |
| 124043 | Clavibacter michiganensis subsp. michiganensis strain PF008 16S ribosomal RNA gene and 16S-23S ribosomal RNA intergenic spacer, partial sequence. | JN603296 | 773 | | 33013 | |
| 124043 | Clavibacter michiganensis subsp. michiganensis strain PF008 16S ribosomal RNA gene and 16S-23S ribosomal RNA intergenic spacer, partial sequence. | JN603297 | 773 | | 33013 | |
| 124043 | Clavibacter michiganensis subsp. michiganensis strain PF008 16S ribosomal RNA gene and 16S-23S ribosomal RNA intergenic spacer, partial sequence. | JN603298 | 773 | | 33013 | |
| 124043 | Clavibacter michiganensis subsp. michiganensis strain PF008 16S ribosomal RNA gene and 16S-23S ribosomal RNA intergenic spacer, partial sequence. | JN603299 | 773 | | 33013 | |
| 124043 | Clavibacter michiganensis subsp. michiganensis strain PF008 16S ribosomal RNA gene and 16S-23S ribosomal RNA intergenic spacer, partial sequence. | JN603300 | 773 | | 33013 | |
| 124043 | Clavibacter michiganensis subsp. michiganensis strain LMG 7333 16S ribosomal RNA gene, partial sequence. | KX373388 | 1425 | | 33013 | |
| @ref | GC-content (mol%) | Method | |
|---|---|---|---|
| 67770 | 72.7 | genome sequence analysis |
| Topic | Title | Authors | Journal | DOI | Year | |
|---|---|---|---|---|---|---|
| Hypericin-Mediated Photodynamic Inactivation Against the Plant Pathogen Clavibacter michiganensis: Preventative Seed Decontamination Enhanced by Potassium Iodide. | Jernej L, Gschwendtner S, Kubin A, Wightman L, Plaetzer K. | Microorganisms | 10.3390/microorganisms13102360 | 2025 | | |
| Polyyne-producing Burkholderia suppress Globisporangium ultimum damping-off disease of Pisum sativum (pea). | Webster G, Mullins AJ, Petrova YD, Mahenthiralingam E. | Front Microbiol | 10.3389/fmicb.2023.1240206 | 2023 | | |
| Prokaryotes in Subsoil-Evidence for a Strong Spatial Separation of Different Phyla by Analysing Co-occurrence Networks. | Uksa M, Schloter M, Endesfelder D, Kublik S, Engel M, Kautz T, Kopke U, Fischer D. | Front Microbiol | 10.3389/fmicb.2015.01269 | 2015 | | |
| Phylogeny | Isolation and characterization of endophytic colonizing bacteria from agronomic crops and prairie plants. | Zinniel DK, Lambrecht P, Harris NB, Feng Z, Kuczmarski D, Higley P, Ishimaru CA, Arunakumari A, Barletta RG, Vidaver AK. | Appl Environ Microbiol | 10.1128/aem.68.5.2198-2208.2002 | 2002 | |
| Eucalyptus globulus Leaf Aqueous Extract Differentially Inhibits the Growth of Three Bacterial Tomato Pathogens. | Pinto M, Soares C, Andreani T, Fidalgo F, Tavares F. | Plants (Basel) | 10.3390/plants12081727 | 2023 | | |
| Phylogeny | Re-classification of Clavibacter michiganensis subspecies on the basis of whole-genome and multi-locus sequence analyses. | Li X, Tambong J, Yuan KX, Chen W, Xu H, Levesque CA, De Boer SH. | Int J Syst Evol Microbiol | 10.1099/ijsem.0.002492 | 2018 | |
| Genetics | Specific and Sensitive Primers Developed by Comparative Genomics to Detect Bacterial Pathogens in Grains. | Baek KY, Lee HH, Son GJ, Lee PA, Roy N, Seo YS, Lee SW. | Plant Pathol J | 10.5423/ppj.oa.11.2017.0250 | 2018 | |
| QTL-Seq Analysis for Identification of Resistance Loci to Bacterial Canker in Tomato. | Abebe AM, Oh CS, Kim HT, Choi G, Seo E, Yeam I, Lee JM. | Front Plant Sci | 10.3389/fpls.2021.809959 | 2021 | | |
| Validation and Application of a Real-time PCR Protocol for the Specific Detection and Quantification of Clavibacter michiganensis subsp. sepedonicus in Potato. | Cho MS, Park DH, Namgung M, Ahn TY, Park DS. | Plant Pathol J | 10.5423/ppj.oa.02.2015.0019 | 2015 | | |
| Phylogeny | Multilocus variable-number-tandem-repeats analysis (MLVA) distinguishes a clonal complex of Clavibacter michiganensis subsp. michiganensis strains isolated from recent outbreaks of bacterial wilt and canker in Belgium. | Zaluga J, Stragier P, Van Vaerenbergh J, Maes M, De Vos P. | BMC Microbiol | 10.1186/1471-2180-13-126 | 2013 | |
| Enzymology | The Lysobacter capsici AZ78 Genome Has a Gene Pool Enabling it to Interact Successfully with Phytopathogenic Microorganisms and Environmental Factors. | Puopolo G, Tomada S, Sonego P, Moretto M, Engelen K, Perazzolli M, Pertot I. | Front Microbiol | 10.3389/fmicb.2016.00096 | 2016 | |
| Phylogeny | Identification of Xanthomonas fragariae, Xanthomonas axonopodis pv. phaseoli, and Xanthomonas fuscans subsp. fuscans with novel markers and using a dot blot platform coupled with automatic data analysis. | Albuquerque P, Caridade CM, Marcal AR, Cruz J, Cruz L, Santos CL, Mendes MV, Tavares F. | Appl Environ Microbiol | 10.1128/aem.05189-11 | 2011 | |
| Enzymology | Multiplex real-time PCR for the detection of Clavibacter michiganensis subsp. michiganensis, Pseudomonas syringae pv. tomato and pathogenic Xanthomonas species on tomato plants. | Penazova E, Dvorak M, Ragasova L, Kiss T, Pecenka J, Cechova J, Eichmeier A. | PLoS One | 10.1371/journal.pone.0227559 | 2020 | |
| L-Amino Acid Oxidases From Mushrooms Show Antibacterial Activity Against the Phytopathogen Ralstonia solanacearum. | Sabotic J, Brzin J, Erjavec J, Dreo T, Tusek Znidaric M, Ravnikar M, Kos J. | Front Microbiol | 10.3389/fmicb.2020.00977 | 2020 | | |
| Enzymology | Detection of Ralstonia solanacearum, which causes brown rot of potato, by fluorescent in situ hybridization with 23S rRNA-targeted probes. | Wullings BA, Van Beuningen AR, Janse JD, Akkermans AD. | Appl Environ Microbiol | 10.1128/aem.64.11.4546-4554.1998 | 1998 | |
| Phylogeny | Multiple Introductions of Tomato Pathogen Clavibacter michiganensis subsp. michiganensis into Iran as Revealed by a Global-Scale Phylogeographic Analysis. | Ansari M, Taghavi SM, Hamzehzarghani H, Valenzuela M, Siri MI, Osdaghi E. | Appl Environ Microbiol | 10.1128/aem.02098-19 | 2019 | |
| A Powerful LAMP Weapon against the Threat of the Quarantine Plant Pathogen Curtobacterium flaccumfaciens pv. flaccumfaciens. | Tegli S, Biancalani C, Ignatov AN, Osdaghi E. | Microorganisms | 10.3390/microorganisms8111705 | 2020 | | |
| Enzymology | Antimicrobial Effects of a Hexapetide KCM21 against Pseudomonas syringae pv. tomato DC3000 and Clavibacter michiganensis subsp. michiganensis. | Choi J, Baek KH, Moon E. | Plant Pathol J | 10.5423/ppj.oa.02.2014.0011 | 2014 | |
| Ecofriendly Control Strategies Against Clavibacter michiganensis, the Causal Agent of Bacterial Canker of Tomato. | Sedighian N, Guineheux A, van der Wolf JM, Deziel E. | Plant Dis | 10.1094/pdis-09-24-1931-fe | 2025 | | |
| A pH-responsive multimodal antimicrobial nanosystem for plant disease control. | Gu A, He C, Zhang S, Wu H, Yang S, Zhou J, Gao Y. | Pestic Biochem Physiol | 10.1016/j.pestbp.2025.106651 | 2025 | | |
| Pink-Pigmented Variant of Clavibacter michiganensis Expands Phenotypic Range of Tomato Bacterial Canker Pathogen. | Haghverdi M, Taghavi SM, Zarei S, Mafakheri H, Abachi H, Briand M, Taghouti G, Portier P, Jacques MA, Osdaghi E. | Phytopathology | 10.1094/phyto-07-24-0236-r | 2025 | | |
| Undescribed antimicrobial labdane diterpenes from the flowers of Euthamia graminifolia. | Baglyas M, Bozso Z, Schwarczinger I, Ott PG, Bakonyi J, Darcsi A, Moricz AM. | Phytochemistry | 10.1016/j.phytochem.2025.114674 | 2026 | | |
| Induction of systemic defense responses in tomato against Clavibacter michiganensis by application of aerated compost tea | Hernandez Aranda VA, Escoto-Rodriguez M, Aguilar-Benitez G, Jarquin R, Cevallos-Cevallos JM, Manzano-Santana PI, Choez-Guaranda IA, Lara Avila JP. | Eur J Plant Pathol | 10.1007/s10658-024-02964-4 | 2025 | | |
| Early detection of bacterial canker in tomato plants using spectroscopy for smart agriculture applications | Papazoglou P, Navrozidis I, Testempasis S, Pantazi XE, Lagopodi A, Alexandridis T. | Biosyst Eng | 10.1016/j.biosystemseng.2025.01.009 | 2025 | | |
| Sugar maple leaf extracts: A new tool to control bacterial canker of tomato caused by Clavibacter michiganensis subsp. michiganensis | Tremblay V, Delisle-Houde M, Demers F, D'Amours C, Filion M, Tweddell RJ. | Plant Pathol | 2024 | | ||
| Antimicrobial and antifungal edible coatings with ZnO nanoparticles dispersed in a chitosan-guar gum matrix for hass avocado preservation. | Chavez-Esquivel G, Angeles-Beltran D, de la Torre PMT, Cortes-Cordova DE, Huerta-Arcos L, de Los Santos PE. | Int J Biol Macromol | 10.1016/j.ijbiomac.2025.142467 | 2025 | | |
| Genetics | Whole-genome sequence of a novel lytic bacteriophage infecting Clavibacter michiganensis subsp. michiganensis from Turkey. | Bekircan Eski D, Gencer D, Darcan C. | J Gen Virol | 10.1099/jgv.0.002006 | 2024 | |
| Localization characteristics of cell wall synthesis protein Wag31 and penicillin binding protein C in Clavibacter michiganensis. | Yu C, Xu X, Shi J, Chu W, Jiang N, Li J, Luo L. | Cell Surf | 10.1016/j.tcsw.2025.100151 | 2025 | | |
| A New Multiplex TaqMan qPCR for Precise Detection and Quantification of Clavibacter michiganensis in Seeds and Plant Tissue. | Brochu AS, Dumonceaux TJ, Valenzuela M, Belanger R, Perez-Lopez E. | Plant Dis | 10.1094/pdis-06-23-1194-sr | 2024 | | |
| Biotechnology | Discovery, Characterization, and Application of Broad-Spectrum Antimicrobial Peptide AtR905 from Aspergillus terreus as a Biocontrol Agent. | Zhao Y, Liu F, Lan X, Xu W, Dong W, Ke S, Wu H. | J Agric Food Chem | 10.1021/acs.jafc.4c09294 | 2025 | |
| Preparation, structural characterization and rheological properties of a novel fucose-containing exopolysaccharide from Clavibacter michiganensis | Xiao M, Tang L, Fu X, Ren X, Bi J, Wang J, Li D, Kong Q, Mou H, Zhu C. | Food hydrocolloids. | 2024 | | ||
| Two plasmid-borne virulence genomic islands of Clavibacter michiganensis are genetically diverse and determine the development of wilt symptoms in host plants. | Hwang IS, Nguyen TT, Oh EJ, Cho G, Kim JH, Kim KT, Lee YH, Han YK, Oh CS. | New Phytol | 10.1111/nph.70329 | 2025 | | |
| Pathogenicity | A novel virulence gene, cviA1 of Clavibacter michiganensis for necrosis development in the Nicotiana benthamiana plant. | Hwang IS, Oh EJ, Oh CS. | Microbiol Res | 10.1016/j.micres.2024.127743 | 2024 | |
| Climate change-driven shifts in the global distribution of tomato and potato crops and their associated bacterial pathogens. | Hubab M, Lorestani N, Al-Awabdeh RAM, Shabani F. | Front Microbiol | 10.3389/fmicb.2025.1520104 | 2025 | | |
| Biologically inspired nanoformulations for the control of bacterial canker pathogens Clavibacter michiganensis subsp. michiganensis and subsp. capsici. | Omran BA, Rabbee MF, Baek KH. | J Biotechnol | 10.1016/j.jbiotec.2024.06.017 | 2024 | | |
| Genetics | In silico analysis of secreted proteins via Sec- and Tat-pathways of Clavibacter spp. unravels functional diversity related to plant host range. | Hernandez-Aranda V, Jarquin-Galvez R, Aguilar-Benitez G, Vega-Manriquez D, Vallejo-Perez M, Escoto-Rodriguez M, Winkler R, Lara-Avila JP. | Genome | 10.1139/gen-2025-0037 | 2025 | |
| From Natural Product Derivative to Hexagonal Prism Supermolecule: Potent Biofilm Disintegration, Enhanced Foliar Affinity, and Effective Management of Tomato Bacterial Canker. | Chen X, Yang R, Liu K, Liu M, Shi Q, Yang J, Hao G, Luo L, Du F, Wang P. | Angew Chem Int Ed Engl | 10.1002/anie.202416079 | 2025 | | |
| Bacterial alarmone (p)ppGpp mediates the pathogenicity of Clavibacter michiganensis via a dual mechanism that affects both enzyme production and the Tat secretion system. | Xu X, Bai K, Shi J, Yu C, Song S, Jiang N, Li J, Luo L. | mSystems | 10.1128/msystems.00135-25 | 2025 | | |
| Exopolysaccharides of lactic acid bacteria as protective agents against bacterial and viral plant pathogens. | Garmasheva I, Tomila T, Kharkhota M, Oleschenko L. | Int J Biol Macromol | 10.1016/j.ijbiomac.2024.133851 | 2024 | | |
| Antibacterial and Antifungal Activity and Acute Toxicity of Crude Extracts From the Wild Edible Mushrooms Cantharellus veraecrucis, Cantharellus violaceovinosus, and Turbinellus floccosus. | Ramos A, Mendoza G, Serrano-Marquez L. | Int J Food Sci | 10.1155/ijfo/5004650 | 2025 | | |
| Bactericidal activity of Ag nanoparticles biosynthesized from Capsicum annuum pericarps against phytopathogenic Clavibacter michiganensis. | Smirnov O, Kalynovskyi V, Zelena P, Yumyna Y, Dzhagan V, Kovalenko M, Konotop Y, Taran N. | Naturwissenschaften | 10.1007/s00114-023-01844-x | 2023 | | |
| Diphenyl ethers from endophytic fungus Rhexocercosporidium sp. Dzf14 and their antibacterial activity by affecting homeostasis of cell membranes. | Gu G, Hou X, Xue M, Pan X, Dong J, Yang Y, Amuzu P, Xu D, Lai D, Zhou L. | Pest Manag Sci | 10.1002/ps.7972 | 2024 | | |
| Genetics | Clavibacter michiganensis Reframed: The Story of How the Genomics Era Made a New Face for an Old Enemy. | Osdaghi E, Abachi H, Jacques MA. | Mol Plant Pathol | 10.1111/mpp.70093 | 2025 | |
| Volatile organic compounds of the soil bacterium Bacillus halotolerans suppress pathogens and elicit defense-responsive genes in plants. | Rana A, Sudakov K, Carmeli S, Miyara SB, Bucki P, Minz D. | Microbiol Res | 10.1016/j.micres.2024.127611 | 2024 | | |
| Inactivation efficacy of low-pressure plasma treatment against seed-borne tomato pathogen Clavibacter michiganensis and effect of seed setting position and mesh sheet usage. | Nishioka T, Takai Y, Mishima T, Tanimoto H, Okada K, Misawa T, Kusakari S. | J Microorg Control | 10.4265/jmc.28.3_123 | 2023 | | |
| Management of Tomato Bacterial Canker Disease by the Green Fabricated Silver Nanoparticles. | Hussain MA, Nijabat A, Rehman MMU, Qurashi R, Siddiqui MH, Alamri S, Mashwani Z-, Leghari SUK, Shah MA, Zaman QU. | BMC Plant Biol | 10.1186/s12870-024-05238-7 | 2024 | | |
| Novel antimicrobial activity of protein produced by Streptomyces lividans TK24 against the phytopathogen Clavibacter michiganensis. | Calderon-de la Sancha FJ, Carrasco-Navarro U, Santander G, Barrios-Gonzalez J, Mejia A. | Arch Microbiol | 10.1007/s00203-022-03290-1 | 2022 | | |
| Phylogeny | Discovery of Undescribed Clerodane Diterpenoids with Antimicrobial Activity Isolated from the Roots of Solidago gigantea Ait. | Baglyas M, Bozso Z, Schwarczinger I, Ott PG, Bakonyi J, Darcsi A, Moricz AM. | Int J Mol Sci | 10.3390/ijms26189187 | 2025 | |
| Uracil hydrazones: design, synthesis, antimicrobial activities, and putative mode of action. | Zhou H, Li QX, Zeng L, Cao C, Zhang T, Zhou Y, He H. | Pest Manag Sci | 10.1002/ps.7771 | 2024 | | |
| The center of wheat domestication drives diversity of Clavibacter pathogens. | Rahmanzadeh A, Taghavi SM, Zarei S, Abachi H, Zamani N, Hamidizade M, Soleimani A, Li X, Chuan J, Kuzmanovic N, Jacques M-A, Portier P, Osdaghi E. | Appl Environ Microbiol | 10.1128/aem.01245-25 | 2025 | | |
| Phytochemical Study of Ethanol Extract of Gnaphalium uliginosum L. and Evaluation of Its Antimicrobial Activity. | Davydova L, Menshova A, Shumatbaev G, Babaev V, Nikitin E. | Antibiotics (Basel) | 10.3390/antibiotics13080785 | 2024 | | |
| RNA-Seq Analysis Discovers the Critical Role of Rel in ppGpp Synthesis, Pathogenicity, and the VBNC State of Clavibacter michiganensis. | Bai K, Jiang N, Chen X, Xu X, Li J, Luo L. | Phytopathology | 10.1094/phyto-01-22-0023-r | 2022 | | |
| CRISPR/dCas12a-mediated activation of SlPAL2 enhances tomato resistance against bacterial canker disease. | Rivera-Toro DM, de Folter S, Alvarez-Venegas R. | PLoS One | 10.1371/journal.pone.0320436 | 2025 | | |
| Morphological and molecular characterization of Clavibacter michiganensis subsp. michiganensis causing bacterial canker in tomatoes | Tripathi R, Vishunavat K, Tewari R. | Physiol Mol Plant Pathol | 2022 | | ||
| Bioassay-Guided Isolation of cis-Clerodane Diterpenoids and Monoglycerides from the Leaves of Solidago gigantea and Their Antimicrobial Activities. | Baglyas M, Ott PG, Bozso Z, Schwarczinger I, Bakonyi J, Dlauchy D, Darcsi A, Varga S, Moricz AM. | Plants (Basel) | 10.3390/plants14142152 | 2025 | | |
| Pathogenicity | Allelic variations in the chpG effector gene within Clavibacter michiganensis populations determine pathogen host range. | Verma RK, Roman-Reyna V, Raanan H, Coaker G, Jacobs JM, Teper D. | PLoS Pathog | 10.1371/journal.ppat.1012380 | 2024 | |
| Efficacy of biosynthesized silver nanoparticles from Larrea tridentata against Clavibacter michiganensis | Mendez-Andrade R, Vallejo-Perez MR, Loera-Alvarado E, de los Santos-Villarreal G, Garcia-Cerda LA, Vera-Reyes I. | Journal of phytopathology. | 2022 | | ||
| Genetics | A host shift as the origin of tomato bacterial canker caused by Clavibacter michiganensis. | Yanez-Olvera AG, Gomez-Diaz AG, Selem-Mojica N, Rodriguez-Orduna L, Lara-Avila JP, Varni V, Alcoba F, Croce V, Legros T, Torres A, Torres Ruiz A, Tarrats F, Vermunt A, Looije T, Cibrian-Jaramillo A, Valenzuela M, Siri MI, Barona-Gomez F. | Microb Genom | 10.1099/mgen.0.001309 | 2024 | |
| Phylogeny | Anti-phytopathogenic-bacterial fatty acids from the mycelia of the edible mushroom Agaricus blazei. | Wang J, Wu J, Ogura R, Kobori H, Choi JH, Hirai H, Takikawa Y, Kawagishi H. | Biosci Biotechnol Biochem | 10.1093/bbb/zbac117 | 2022 | |
| Two new psychrotolerant Massilia species inhibit plant pathogens Clavibacter and Curtobacterium. | Sedlacek I, Holochova P, Sedlar K, Stankova E, Sedo O, Kralova S, Umair M, Koublova V, Svec P. | Sci Rep | 10.1038/s41598-025-09734-0 | 2025 | | |
| Unmarked Gene Editing in Clavibacter michiganensis Using CRISPR/Cas9 and 5-Fluorocytosine Counterselection. | Chen X, Tan Q, Lyu Q, Yu C, Jiang N, Li J, Luo L. | Mol Plant Microbe Interact | 10.1094/mpmi-07-21-0179-ta | 2022 | | |
| Phylogeny | Antibacterial Activity of Dihydroquercetin Separated from Fructus Polygoni orientalis against Clavibacter michiganensis subsp. sepedonicus via Damaging Cell Membrane. | Cai J, Wang S, Wang Q. | Foods | 10.3390/foods13010023 | 2023 | |
| Strength in Numbers: Density-Dependent Volatile-Induced Antimicrobial Activity by Xanthomonas perforans. | Klein-Gordon JM, Guingab-Cagmat J, Minsavage GV, Meke L, Vallad GE, Goss EM, Garrett TJ, Jones JB. | Phytopathology | 10.1094/phyto-04-22-0131-r | 2023 | | |
| Biocontrol of Plant Diseases Using Glycyrrhiza glabra Leaf Extract. | Hermann S, Orlik M, Boevink P, Stein E, Scherf A, Kleeberg I, Schmitt A, Schikora A. | Plant Dis | 10.1094/pdis-12-21-2813-re | 2022 | | |
| Phylogeny | A new lanostane triterpenoid from the mushroom Hypholoma fasciculare. | Wang J, Wu J, Tsutsumi K, Choi JH, Hirai H, Kobori H, Takikawa Y, Kawagishi H. | Biosci Biotechnol Biochem | 10.1093/bbb/zbac050 | 2022 | |
| Transcriptome | Transcriptome analysis of tomato plants following salicylic acid-induced immunity against Clavibacter michiganensis ssp. michiganensis. | Yokotani N, Hasegawa Y, Kouzai Y, Hirakawa H, Isobe S. | Plant Biotechnol (Tokyo) | 10.5511/plantbiotechnology.23.0711a | 2023 | |
| Identification of two phthalide derivatives and an oxindole compound isolated from the edible mushroom Pleurotus ostreatus and their inhibitory activities against plant pathogenic microorganisms. | Cabutaje EM, Ueno K, Osaki-Oka K, Kido K, Dela Cruz TEE, Ishihara A. | J Pestic Sci | 10.1584/jpestics.d23-039 | 2023 | | |
| Plant pathogen detection on a lab-on-a-disc using solid-phase extraction and isothermal nucleic acid amplification enabled by digital pulse-actuated dissolvable film valves. | Mishra R, Julius LA, Condon J, Pavelskopfa P, Early PL, Dorrian M, Mrvova K, Henihan G, Mangwanya F, Dreo T, Ducree J, Macdonald NP, Schoen C, Kinahan DJ. | Anal Chim Acta | 10.1016/j.aca.2023.341070 | 2023 | | |
| Evaluation of Droplet Digital PCR for the Detection of Black Canker Disease in Tomato. | Wang L, Tian Q, Zhou P, Zhao W, Sun X. | Plant Dis | 10.1094/pdis-02-21-0317-re | 2022 | | |
| Antimicrobial Peptides as Part of the Arsenal of Constitutive and Inducible Seed Defences in Tomato Seed Exudates Against Pathogens. | Tarkowski LP, Hubert B, Marchi M, Tranchant C, Boutet S, Brosse C, Causse M, Balliau T, Blein-Nicolas M, Corso M, Aubourg S, Verdier J. | Mol Plant Pathol | 10.1111/mpp.70164 | 2025 | | |
| Phenotype | Role of Penicillin-Binding Proteins in the Viability, Morphology, Stress Tolerance, and Pathogenicity of Clavibacter michiganensis. | Chen X, Bai K, Lyu Q, Jiang N, Li J, Luo L. | Phytopathology | 10.1094/phyto-08-20-0326-r | 2021 | |
| Chiral analysis of glycerol phosphates - can bacteria biosynthesize heterochiral phospholipid membranes? | Palyzova A, Guschina IA, Rezanka T. | J Chromatogr A | 10.1016/j.chroma.2022.463267 | 2022 | | |
| Comparative transcriptome analysis of resistant and cultivated tomato lines in response to Clavibacter michiganensis subsp. michiganensis. | Basim H, Basim E, Tombuloglu H, Unver T. | Genomics | 10.1016/j.ygeno.2021.05.033 | 2021 | | |
| Enzymology | Improved multiplex TaqMan qPCR assay with universal internal control offers reliable and accurate detection of Clavibacter michiganensis. | Ramachandran S, Dobhal S, Alvarez AM, Arif M. | J Appl Microbiol | 10.1111/jam.15017 | 2021 | |
| Investigation of Antibacterial Properties of Corrosion-Resistant 316L Steel Alloyed with 0.2 wt.% and 0.5 wt.% Ag. | Kaplan MA, Gorbenko AD, Ivannikov AY, Kartabaeva BB, Konushkin SV, Demin KY, Baikin AS, Sergienko KV, Nasakina EO, Bannykh IO, Gorudko IV, Kolmakov AG, Simakin AV, Gudkov SV, Glinushkin AP, Sevostyanov MA. | Materials (Basel) | 10.3390/ma16010319 | 2022 | | |
| Phylogeny | Epiphytic and endophytic microorganisms associated to different cultivar of tomato fruits in greenhouse environment and characterization of beneficial bacterial strains for the control of post-harvest tomato pathogens. | Panebianco S, Lombardo MF, Anzalone A, Musumarra A, Pellegriti MG, Catara V, Cirvilleri G. | Int J Food Microbiol | 10.1016/j.ijfoodmicro.2022.109861 | 2022 | |
| Phylogeny | Genomic Insights into the Bactericidal and Fungicidal Potential of Bacillus mycoides b12.3 Isolated in the Soil of Olkhon Island in Lake Baikal, Russia. | Romanenko MN, Shikov AE, Savina IA, Shmatov FM, Nizhnikov AA, Antonets KS. | Microorganisms | 10.3390/microorganisms12122450 | 2024 | |
| Synthesis of Adenine-based Fluorescent and Naked-eye Chemosensors: Specific DNA Probes for The Detection of Bacterial Pathogens. | Sener B, Baysal O, Nadeem S, Silme RS. | Acta Chim Slov | 10.17344/acsi.2021.6749 | 2021 | | |
| Silver nanoclusters with Ag2+/3+ oxidative states are a new highly effective tool against phytopathogenic bacteria. | Orfei B, Moretti C, Loreti S, Tatulli G, Onofri A, Scotti L, Aceto A, Buonaurio R. | Appl Microbiol Biotechnol | 10.1007/s00253-023-12596-z | 2023 | | |
| Bacterial Canker of Tomato: Revisiting a Global and Economically Damaging Seedborne Pathogen. | Peritore-Galve FC, Tancos MA, Smart CD. | Plant Dis | 10.1094/pdis-08-20-1732-fe | 2021 | | |
| Nanoparticles as tools for enhancing plant resistance to biotic stress in the context of climate change. | Ruffatto K, Minello LVP, Furtado BG, Johann L, Sperotto RA. | Physiol Plant | 10.1111/ppl.70227 | 2025 | | |
| The synthetic elicitors 2,6-dichloro-isonicotinic acid (INA) and 2,4-dichloro-6-{(E)-[(3-methoxyphenyl)imino]methyl}phenol (DPMP) enhances tomato resistance against bacterial canker disease with different molecular mechanisms | Bektas Y. | Physiol Mol Plant Pathol | 2021 | | ||
| A Genetic Toolkit for Investigating Clavibacter Species: Markerless Deletion, Permissive Site Identification, and an Integrative Plasmid. | Stevens DM, Tang A, Coaker G. | Mol Plant Microbe Interact | 10.1094/mpmi-07-21-0171-ta | 2021 | | |
| Impact of Plant Pathogen Infection on Salmonella enterica subsp. enterica Serotype Typhimurium Persistence in Tomato Plants. | Deblais L, Miller SA, Rajashekara G. | J Food Prot | 10.4315/jfp-20-291 | 2021 | | |
| Enzymology | Deletion of pbpC Enhances Bacterial Pathogenicity on Tomato by Affecting Biofilm Formation, Exopolysaccharides Production, and Exoenzyme Activities in Clavibacter michiganensis. | Li Y, Chen X, Xu X, Yu C, Liu Y, Jiang N, Li J, Luo L. | Int J Mol Sci | 10.3390/ijms24065324 | 2023 | |
| Inactivation of tomato WAT1 leads to reduced susceptibility to Clavibacter michiganensis through downregulation of bacterial virulence factors. | Koseoglou E, Hanika K, Mohd Nadzir MM, Kohlen W, van der Wolf JM, Visser RGF, Bai Y. | Front Plant Sci | 10.3389/fpls.2023.1082094 | 2023 | | |
| Formulation of Mentha piperita-Based Nanobiopesticides and Assessment of the Pesticidal and Antimicrobial Potential. | Jahan N, Hussain N, Touqeer SI, Khalil-Ur-Rahman, Shamshad H, Abbas N. | Life (Basel) | 10.3390/life14010144 | 2024 | | |
| Broad-Spectrum Antimicrobial Potential of the gamma-Core Motif Peptides of Filipendula ulmaria for Practical Applications in Agriculture and Medicine | Slezina M, Kulakovskaya E, Istomina E, Abashina T, Odintsova T. | Int J Mol Sci | 2025 | | ||
| Pathogenicity | Cloning and Functional Analysis of Skin Host Defense Peptides from Yakushima Tago's Brown Frog (Rana tagoi yakushimensis) and Development of Serum Endotoxin Detection System. | Aono T, Tamura S, Suzuki Y, Imanara T, Niwa R, Yamane Y, Kobayashi T, Kikuyama S, Hasunuma I, Iwamuro S. | Antibiotics (Basel) | 10.3390/antibiotics13121127 | 2024 | |
| Virulence is not directly related to strain success in planta in Clavibacter nebraskensis. | Veregge M, Hirsch CD, Moscou MJ, Burghardt L, Tiffin P, Khokhani D. | mSystems | 10.1128/msystems.01355-24 | 2025 | | |
| Production of bacteriocin-like inhibitory substance (BLIS) by Staphylococcus spp. isolates from dogs. | Santos INS, Lilenbaum W, Moreno DSA, Bastos MDCF. | Braz J Microbiol | 10.1007/s42770-024-01532-6 | 2024 | | |
| Phytochemical constituents and extracts of the roots of Scutellaria baicalensis exhibit in vitro and in vivo control efficacy against various phytopathogenic microorganisms | Do HTT, Nguyen TH, Nghiem TD, Nguyen HT, Choi GJ, Ho CT, Le Dang Q. | S Afr J Bot | 2021 | | ||
| Phosphate solubilizing Pseudomonas and Bacillus combined with rock phosphates promoting tomato growth and reducing bacterial canker disease. | Bakki M, Banane B, Marhane O, Esmaeel Q, Hatimi A, Barka EA, Azim K, Bouizgarne B. | Front Microbiol | 10.3389/fmicb.2024.1289466 | 2024 | | |
| In silico and in vitro analyses reveal the potential use of Streptomyces parvulus VNUA74 as bioagent for sustainable banana production. | Nguyen TT, Nguyen TT, Nguyen TH, Nguyen LT, Tran DT, Dinh ST, Vu TM, Nguyen CX. | Sci Rep | 10.1038/s41598-024-83520-2 | 2025 | | |
| Isolation and characterisation of nematicidal compound, leolorin C, from Leonotis leonurus acetone leaf extract. | Makhubu FN, Nkadimeng SM, Fouche G, Khosa MC, McGaw LJ. | J Ethnopharmacol | 10.1016/j.jep.2021.114802 | 2022 | | |
| Fungistatic and Bactericidal Activity of Hydroalcoholic Extracts of Root of Jatropha dioica Sessé. | Aguilar-Galaviz L, Cadena-Iniguez J, Garcia-Flores DA, Loera-Alvarado G, Rivera-Escareno D, Ortega-Amaro MA. | Microorganisms | 10.3390/microorganisms13051027 | 2025 | | |
| Composition and antimicrobial activity of hydroalcoholic extracts of Pleurotus eryngii var. ferulae and P. eryngii var. elaeoselini. | Polito F, De Martino L, Mirabile G, Venturella G, Gargano ML, De Feo V, Elshafie HS, Camele I. | Front Chem | 10.3389/fchem.2024.1498787 | 2024 | | |
| Class A Penicillin-Binding Protein C Is Responsible for Stress Response by Regulation of Peptidoglycan Assembly in Clavibacter michiganensis. | Chen X, Li Y, Bai K, Gu M, Xu X, Jiang N, Chen Y, Li J, Luo L. | Microbiol Spectr | 10.1128/spectrum.01816-22 | 2022 | | |
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| Identification of stable reference genes in Edwardsiella ictaluri for accurate gene expression analysis. | Lu J, Abdelhamed H, Al-Janabi N, Eissa N, Lawrence M, Karsi A. | PLoS One | 10.1371/journal.pone.0309585 | 2025 | | |
| PCR MP Method for Differentiation of Clavibacter michiganensis Subsp. sepedonicus Isolates | Wegierek-Maciejewska A, Masny A, Wolkowicz T, Jagiello A, Arseniuk E. | Am J Potato Res | 10.1007/s12230-019-09752-5 | 2019 | | |
| Genetics | Comparative Genomics to Develop a Specific Multiplex PCR Assay for Detection of Clavibacter michiganensis. | Thapa SP, O'Leary M, Jacques MA, Gilbertson RL, Coaker G. | Phytopathology | 10.1094/phyto-10-19-0405-r | 2020 | |
| Functionalized Silver Nanocapsules with Improved Antibacterial Activity Using Silica Shells Modified with Quaternary Ammonium Polyethyleneimine as a Bacterial Cell-Targeting Agent. | Niu J, Tang G, Tang J, Yang J, Zhou Z, Gao Y, Chen X, Tian Y, Li Y, Li J, Cao Y. | J Agric Food Chem | 10.1021/acs.jafc.1c01930 | 2021 | | |
| Segmentation-based lightweight multi-class classification model for crop disease detection, classification, and severity assessment using DCNN. | Subbarayudu C, Kubendiran M. | PLoS One | 10.1371/journal.pone.0322705 | 2025 | | |
| Characterizing Colonization Patterns of Clavibacter michiganensis During Infection of Tolerant Wild Solanum Species. | Peritore-Galve FC, Miller C, Smart CD. | Phytopathology | 10.1094/phyto-09-19-0329-r | 2020 | | |
| Enzymology | Urchin peroxidase-mimicking Au@Pt nanoparticles as a label in lateral flow immunoassay: impact of nanoparticle composition on detection limit of Clavibacter michiganensis. | Panferov VG, Safenkova IV, Zherdev AV, Dzantiev BB. | Mikrochim Acta | 10.1007/s00604-020-04253-3 | 2020 | |
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| Variation in Streptomycin Resistance Mechanisms in Clavibacter michiganensis. | Lyu Q, Bai K, Kan Y, Jiang N, Thapa SP, Coaker G, Li J, Luo L. | Phytopathology | 10.1094/phyto-05-19-0152-r | 2019 | | |
| Biological Activities of Different Strains of the Genus Ganoderma spp. (Agaricomycetes) from Mexico. | Espinosa-Garcia V, Mendoza G, Shnyreva AV, Padron JM, Trigos A. | Int J Med Mushrooms | 10.1615/intjmedmushrooms.2021037451 | 2021 | | |
| Green inspired synthesis of zinc oxide nanoparticles using Silybum marianum (milk thistle) extract and evaluation of their potential pesticidal and phytopathogens activities. | Jahan N, Rasheed K, Rahman KU, Hazafa A, Saleem A, Alamri S, Iqbal MO, Rahman MA. | PeerJ | 10.7717/peerj.15743 | 2023 | | |
| Phosphate and potash solubilizing bacteria from Moroccan phosphate mine showing antagonism to bacterial canker agent and inducing effective tomato growth promotion. | Bouizgarne B, Bakki M, Boutasknit A, Banane B, El Ouarrat H, Ait El Maalem S, Amenzou A, Ghousmi A, Meddich A. | Front Plant Sci | 10.3389/fpls.2023.970382 | 2023 | | |
| Phytochemical Profile and In Vitro Bioactivities of Plant-Based By-Products in View of a Potential Reuse and Valorization. | Chiocchio I, Mandrone M, Tacchini M, Guerrini A, Poli F. | Plants (Basel) | 10.3390/plants12040795 | 2023 | | |
| Genetics | An Emerging Bacterial Leaf Disease in Rice Caused by Pantoea ananatis and Pantoea eucalypti in Northeast China. | Duan G, Liu X, Zhang S, Chai M, Peng Z, Lin Z, Li D, Sun W. | Microorganisms | 10.3390/microorganisms13061376 | 2025 | |
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| Suppressive Effect of Bioactive Extracts of Bacillus sp. H8-1 and Bacillus sp. K203 on Tomato Wilt Caused by Clavibacter michiganensis subsp. michiganensis. | Jang H, Kim ST, Sang MK. | Microorganisms | 10.3390/microorganisms10020403 | 2022 | | |
| Pathogenicity | Immune recognition of the secreted serine protease ChpG restricts the host range of Clavibacter michiganensis from eggplant varieties. | Verma RK, Teper D. | Mol Plant Pathol | 10.1111/mpp.13215 | 2022 | |
| Modes of Action of Biocontrol Agents and Elicitors for sustainable Protection against Bacterial Canker of Tomato. | Benchlih S, Esmaeel Q, Aberkani K, Tahiri A, Belabess Z, Lahlali R, Barka EA. | Microorganisms | 10.3390/microorganisms11030726 | 2023 | | |
| Enterobacter sp. DBA51 produces ACC deaminase and promotes the growth of tomato (Solanum lycopersicum L.) and tobacco (Nicotiana tabacum L.) plants under greenhouse condition. | Ortega-Ortega Y, Sarmiento-Lopez LG, Baylon-Palomino A, Vazquez-Lee J, Maldonado-Bonilla LD, Flores-Olivas A, Valenzuela-Soto JH. | Curr Res Microb Sci | 10.1016/j.crmicr.2023.100207 | 2024 | | |
| In Silico Integrated Analysis of Genomic, Transcriptomic, and Proteomic Data Reveals QTL-Specific Genes for Bacterial Canker Resistance in Tomato (Solanum lycopersicum L.). | Celik I. | Curr Issues Mol Biol | 10.3390/cimb45020090 | 2023 | | |
| An Apoplastic Effector Pat-1Cm of the Gram-Positive Bacterium Clavibacter michiganensis Acts as Both a Pathogenicity Factor and an Immunity Elicitor in Plants. | Hwang IS, Oh EJ, Song E, Park IW, Lee Y, Sohn KH, Choi D, Oh CS. | Front Plant Sci | 10.3389/fpls.2022.888290 | 2022 | | |
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| Specific Bacterial Pathogen Phytosensing Is Enabled by a Synthetic Promoter-Transcription Factor System in Potato. | Persad-Russell R, Mazarei M, Schimel TM, Howe L, Schmid MJ, Kakeshpour T, Barnes CN, Brabazon H, Seaberry EM, Reuter DN, Lenaghan SC, Stewart CN. | Front Plant Sci | 10.3389/fpls.2022.873480 | 2022 | | |
| Potential of Bacillus amyloliquefaciens for biocontrol of bacterial canker of tomato incited by Clavibacter michiganensis ssp. michiganensis. | Gautam S, Chauhan A, Sharma R, Sehgal R, Shirkot CK. | Microb Pathog | 10.1016/j.micpath.2019.03.006 | 2019 | | |
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| The Influence of the Conditions of Cultivation of Lactic Acid Bacteria on Their Antagonistic Activity Against Some Plant Pathogenic Bacteria. | Vasyliuk O, Garmasheva I, Skrotskyi S, Khomenko L, Hretskyi I, Senchylo N. | Plant Direct | 10.1002/pld3.70101 | 2025 | | |
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| Phylogeny | Antimicrobial Diterpenes from Rough Goldenrod (Solidago rugosa Mill.). | Baglyas M, Ott PG, Schwarczinger I, Nagy JK, Darcsi A, Bakonyi J, Moricz AM. | Molecules | 10.3390/molecules28093790 | 2023 | |
| Extraction and detection of guanosine 5'-diphosphate-3'-diphosphate in amino acid starvation cells of Clavibacter michiganensis. | Bai K, Chen X, Jiang N, Lyu Q, Li J, Luo L. | Braz J Microbiol | 10.1007/s42770-021-00488-1 | 2021 | | |
| Phylogeny | Differentiation of Clavibacter michiganensis subsp. sepedonicus using PCR melting profile and variable number of tandem repeat methods. | Zaczek A, Strus K, Sokolowska A, Parniewski P, Wojtasik A, Dziadek J. | Lett Appl Microbiol | 10.1111/lam.13081 | 2019 | |
| Genetics | Analyses of Virulence Genes of Clavibacter michiganensis subsp. michiganensis Strains Reveal Heterogeneity and Deletions That Correlate with Pathogenicity. | Valenzuela M, Gonzalez M, Velasquez A, Dorta F, Montenegro I, Besoain X, Salva-Serra F, Jaen-Luchoro D, Moore ERB, Seeger M. | Microorganisms | 10.3390/microorganisms9071530 | 2021 | |
| Phylogeny | Development of a loop-mediated isothermal amplification assay for specific detection of all known subspecies of Clavibacter michiganensis. | Dobhal S, Larrea-Sarmiento A, Alvarez AM, Arif M. | J Appl Microbiol | 10.1111/jam.14128 | 2019 | |
| Clavibacter michiganensis subsp. michiganensis strains from central Chile exhibit low genetic diversity and sequence types match strains in other parts of the world | Valenzuela M, Besoain X, Durand K, Cesbron S, Fuentes S, Claverias F, Jacques MA, Seeger M. | Plant Pathol | 10.1111/ppa.12911 | 2018 | | |
| Bioactive Compounds from the Mushroom-Forming Fungus Chlorophyllum molybdites. | Wu J, Ohura T, Ogura R, Wang J, Choi JH, Kobori H, D'Alessandro-Gabazza CN, Toda M, Yasuma T, Gabazza EC, Takikawa Y, Hirai H, Kawagishi H. | Antibiotics (Basel) | 10.3390/antibiotics12030596 | 2023 | | |
| Plant growth promoting activities of endophytic bacteria from Melia azedarach (Meliaceae) and their influence on plant growth under gnotobiotic conditions. | Ramirez C, Cardozo M, Lopez Gaston M, Galdeano E, Collavino MM. | Heliyon | 10.1016/j.heliyon.2024.e35814 | 2024 | | |
| The family of glutathione peroxidase proteins and their role against biotic stress in plants: a systematic review. | do Carmo Santos ML, Silva Santos A, Pereira Silva de Novais D, Dos Santos Lopes N, Pirovani CP, Micheli F. | Front Plant Sci | 10.3389/fpls.2025.1425880 | 2025 | | |
| Development of an in vitro protocol to screen Clavibacter michiganensis subsp. michiganensis pathogenicity in different Solanum species | Mohd Nadzir MM, Vieira Lelis FM, Thapa B, Ali A, Visser RGF, van Heusden AW, Van der Wolf JM. | Plant Pathol | 10.1111/ppa.12923 | 2019 | | |
| Comparative Analysis of Chemical Profile and Biological Activity of Juniperus communis L. Berry Extracts. | Belov T, Terenzhev D, Bushmeleva KN, Davydova L, Burkin K, Fitsev I, Gatiyatullina A, Egorova A, Nikitin E. | Plants (Basel) | 10.3390/plants12193401 | 2023 | | |
| Biological investigations of essential oils extracted from three Juniperus species and evaluation of their antimicrobial, antioxidant and cytotoxic activities. | Elshafie HS, Caputo L, De Martino L, Grulova D, Zheljazkov VZ, De Feo V, Camele I. | J Appl Microbiol | 10.1111/jam.14723 | 2020 | | |
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| Detection of Potato Pathogen Clavibacter sepedonicus by CRISPR/Cas13a Analysis of NASBA Amplicons. | Khmeleva SA, Kurbatov LK, Ptitsyn KG, Timoshenko OS, Morozova DD, Suprun EV, Radko SP, Lisitsa AV. | Int J Mol Sci | 10.3390/ijms252212218 | 2024 | | |
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| Re-evaluation of Seed Transmission of Clavibacter michiganensis subsp. nebraskensis in Zea mays. | Block CC, Shepherd LM, Mbofung-Curtis GC, Sernett JM, Robertson AE. | Plant Dis | 10.1094/pdis-02-18-0292-re | 2019 | | |
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| An Effect of Weather and Soil Conditions and Their Interaction on Infection of Leaves and Tubers of Potato with Bacteria Clavibacter michiganensis subsp. sepedonicus | Pietraszko M, Gryn G, Przewodowski W. | Am J Potato Res | 10.1007/s12230-017-9629-6 | 2018 | | |
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| Pathogenicity and phylogenetic analysis of Clavibacter michiganensis strains associated with tomato plants in Iran | Osdaghi E, Ansari M, Taghavi SM, Zarei S, Koebnik R, Lamichhane JR. | Plant Pathol | 10.1111/ppa.12801 | 2018 | | |
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| Pathogenicity | Selenium Nanocomposites Having Polysaccharid Matrices Stimulate Growth of Potato Plants in Vitro Infected with Ring Rot Pathogen. | Perfileva AI, Nozhkina OA, Graskova IA, Dyakova AV, Pavlova AG, Aleksandrova GP, Klimenkov IV, Sukhov BG, Trofimov BA. | Dokl Biol Sci | 10.1134/s0012496619060073 | 2019 | |
| Herbicidal and Antibacterial Secondary Metabolites Isolated from the Nicotiana tabacum-Derived Endophytic Fungus Aspergillus japonicus TE-739D. | Wang H, Yuan X, Huang X, Zhang P, Gu G. | Plants (Basel) | 10.3390/plants14020173 | 2025 | | |
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| Chitosan as an Antimicrobial, Anti-Insect, and Growth-Promoting Agent for Potato (Solanum tuberosum L.) Plants. | Steglinska A, Nowak A, Janas R, Grzesik M, Smigielski K, Kregiel D, Gutarowska B. | Molecules | 10.3390/molecules29143313 | 2024 | | |
| Bactericidal effect of silver nanoparticles against propagation of Clavibacter michiganensis infection in Lycopersicon esculentum Mill. | Rivas-Caceres RR, Luis Stephano-Hornedo J, Lugo J, Vaca R, Del Aguila P, Yanez-Ocampo G, Mora-Herrera ME, Camacho Diaz LM, Cipriano-Salazar M, Alaba PA. | Microb Pathog | 10.1016/j.micpath.2017.12.075 | 2018 | | |
| First Report of Clavibacter michiganensis subsp. sepedonicus Infecting Sugar Beet in Russia | Ignatov AN, Panycheva JS, Spechenkova N, Taliansky M. | Plant Dis | 10.1094/pdis-04-18-0693-pdn | 2018 | | |
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| Metabolism | Functional and structural analyses of an expansin-like protein from the antarctic yeast Glaciozyma antarctica PI12 reveal strategies of nutrient scavenging in the sea ice environment. | Mohamad Nor N, Hashim NHF, Quay DHX, Mahadi NM, Illias RM, Abu Bakar FD, Murad AMA. | Int J Biol Macromol | 10.1016/j.ijbiomac.2019.12.099 | 2020 | |
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| Enzymology | Detection of Potato ring rot Pathogen Clavibacter michiganensis subsp. sepedonicus by Loop-mediated isothermal amplification (LAMP) assay. | Sagcan H, Turgut Kara N. | Sci Rep | 10.1038/s41598-019-56680-9 | 2019 | |
| In vitro antimicrobial effect of metallic nanoparticles on phytopathogenic strains of crop plants | Vera-Reyes I, Esparza-Arredondo IJE, Lira-Saldivar RH, Granados-Echegoyen CA, Alvarez-Roman R, Vasquez-Lopez A, De los Santos-Villarreal G, Diaz-Barriga Castro E. | Journal of phytopathology. | 10.1111/jph.12818 | 2019 | | |
| Proteome | LC-MS/MS-based phospholipid profiling of plant-pathogenic bacteria with tailored separation of methyl-branched species. | Rudt E, Faist C, Schwantes V, Konrad N, Wiedmaier-Czerny N, Lehnert K, Topman-Rakover S, Brill A, Burdman S, Hayouka Z, Vetter W, Hayen H. | Anal Bioanal Chem | 10.1007/s00216-024-05451-1 | 2024 | |
| Genetics | Comparative Genomic Analyses of Clavibacter michiganensis subsp. insidiosus and Pathogenicity on Medicago truncatula. | Lu Y, Ishimaru CA, Glazebrook J, Samac DA. | Phytopathology | 10.1094/phyto-05-17-0171-r | 2018 | |
| Diverse roles played by "Pseudomonas fluorescens complex" volatile compounds in their interaction with phytopathogenic microrganims, pests and plants. | Raio A. | World J Microbiol Biotechnol | 10.1007/s11274-023-03873-0 | 2024 | | |
| Pathogenicity | Gene isolation and structural characterization of a legume tree defensin with a broad spectrum of antimicrobial activity. | Rodriguez-Decuadro S, Dans PD, Borba MA, Benko-Iseppon AM, Cecchetto G. | Planta | 10.1007/s00425-019-03260-w | 2019 | |
| Clavibacter michiganensis subsp. michiganensis strains virulence and genetic diversity. a first study in Argentina | Wassermann E, Montecchia MS, Correa OS, Damian V, Romero AM. | Eur J Plant Pathol | 10.1007/s10658-017-1159-z | 2017 | | |
| Green Myco-Synthesis of Zinc Oxide Nanoparticles Using Cortinarius sp.: Hepatoprotective, Antimicrobial, and Antioxidant Potential for Biomedical Applications. | Fazal U, Zada A, Hanif M, Lee SY, Faisal M, Alatar AA, Sultana T, Sohail. | Microorganisms | 10.3390/microorganisms13050956 | 2025 | | |
| Enzymology | Insights into the action of phylogenetically diverse microbial expansins on the structure of cellulose microfibrils. | Haddad Momeni M, Zitting A, Jaamuru V, Turunen R, Penttila P, Buchko GW, Hiltunen S, Maiorova N, Koivula A, Sapkota J, Marjamaa K, Master ER. | Biotechnol Biofuels Bioprod | 10.1186/s13068-024-02500-w | 2024 | |
| The Extract of Larrea tridentata Promotes the Synthesis of Silver Nanoparticles and Stimulates Immune Responses in Penaeus vannamei Against Vibrio spp., Causing Acute Hepatopancreatic Necrosis Disease. | Leon-Valdez G, Valenzuela-Quinonez W, Alvarez-Ruiz P, Soto-Robles CA, Nava-Perez E, Lopez-Cervantes G, Montoya-Mejia M. | Microorganisms | 10.3390/microorganisms12112219 | 2024 | | |
| Biochemical Characterization and Disease Control Efficacy of Pleurotus eryngii-Derived Chitosan-An In Vivo Study against Monilinia laxa, the Causal Agent of Plum Brown Rot. | Camele I, Mohamed AA, Ibrahim AA, Elshafie HS. | Plants (Basel) | 10.3390/plants13182598 | 2024 | | |
| A Novel Isolate of Bacillus cereus Promotes Growth in Tomato and Inhibits Clavibacter michiganensis Infection under Greenhouse Conditions. | Solano-Alvarez N, Valencia-Hernandez JA, Rico-Garcia E, Torres-Pacheco I, Ocampo-Velazquez RV, Escamilla-Silva EM, Romero-Garcia AL, Alpuche-Solis AG, Guevara-Gonzalez RG. | Plants (Basel) | 10.3390/plants10030506 | 2021 | | |
| Draft Genome Sequences of the Type Strains of Three Clavibacter Subspecies and Atypical Peach-Colored Strains Isolated from Tomato. | Osdaghi E, Portier P, Briand M, Taghouti G, Jacques MA. | Microbiol Resour Announc | 10.1128/mra.01357-18 | 2018 | | |
| A multidisciplinary approach to tackling invasive species: barcoding, morphology, and metataxonomy of the leafhopper Arboridia adanae. | Piccinno R, Tatti A, Avosani S, Galla G, Lazazzara V, Pedrazzoli F, Zadra N, Rodeghiero M, Seljak G, Ozgen I, Hauffe HC, Verrastro V, Stacconi MVR, Mazzoni V, Rota-Stabelli O. | Sci Rep | 10.1038/s41598-023-49410-9 | 2024 | | |
| Genetics | Genomic Analysis of Clavibacter michiganensis Reveals Insight Into Virulence Strategies and Genetic Diversity of a Gram-Positive Bacterial Pathogen. | Thapa SP, Pattathil S, Hahn MG, Jacques MA, Gilbertson RL, Coaker G. | Mol Plant Microbe Interact | 10.1094/mpmi-06-17-0146-r | 2017 | |
| Pathogenicity | Nicotiana benthamiana, a Surrogate Host to Study Novel Virulence Mechanisms of Gram-Positive Bacteria, Clavibacter michiganensis, and C. capsici in Plants. | Park IW, Hwang IS, Oh EJ, Kwon CT, Oh CS. | Front Plant Sci | 10.3389/fpls.2022.876971 | 2022 | |
| Fixed-Quat: An Attractive Nonmetal Alternative to Copper Biocides against Plant Pathogens. | Young M, Ozcan A, Rajasekaran P, Kumrah P, Myers ME, Johnson E, Graham JH, Santra S. | J Agric Food Chem | 10.1021/acs.jafc.8b04189 | 2018 | | |
| Pathogenicity | Silver-Containing Humic Substance-Based Nanocomposites-Agents for Healing of Potatoes from the Ring Rot. | Graskova IA, Perfileva AI, Nozhkina OA, Sukhov BG, Aleksandrova GP, Trofimov BA. | Dokl Biol Sci | 10.1134/s0012496618060078 | 2018 | |
| Chemical Eradication of the Ring Rot Bacterium Clavibacter michiganensis subsp. sepedonicus on Potato Storage Crates | Stevens LH, Lamers JG, van der Zouwen PS, Mendes O, van den Berg W, Tjou-Tam-Sin NNA, Jilesen CJTJ, Spoorenberg PM, Van der Wolf JM. | Potato research. | 10.1007/s11540-017-9342-3 | 2017 | | |
| PAM-Independent Cas12a Detection of Specific LAMP Products by Targeting Amplicon Loops | Ptitsyn K, Kurbatov L, Khmeleva S, Morozova D, Timoshenko O, Suprun E, Radko S, Lisitsa A. | Int J Mol Sci | 2025 | | ||
| Phylogeny | Myxobacterial Predation: A Standardised Lawn Predation Assay Highlights Strains with Unusually Efficient Predatory Activity. | Zwarycz AS, Whitworth DE. | Microorganisms | 10.3390/microorganisms11020398 | 2023 | |
| Pathogenic bacterial taxa constitute a substantial portion of fecal microbiota in common migratory bats and birds in Europe. | Poosakkannu A, Xu Y, Suominen KM, Meierhofer MB, Sorensen IH, Madsen JJ, Plaquin B, Guillemain M, Joyeux E, Keiss O, Lilley TM, Lehikoinen A, Pulliainen AT. | Microbiol Spectr | 10.1128/spectrum.01948-24 | 2025 | | |
| Metabolism | Volatile organic compounds produced by a soil-isolate, Bacillus subtilis FA26 induce adverse ultra-structural changes to the cells of Clavibacter michiganensis ssp. sepedonicus, the causal agent of bacterial ring rot of potato. | Rajer FU, Wu H, Xie Y, Xie S, Raza W, Tahir HAS, Gao X. | Microbiology (Reading) | 10.1099/mic.0.000451 | 2017 | |
| Raman Spectroscopy and Machine-Learning for Early Detection of Bacterial Canker of Tomato: The Asymptomatic Disease Condition. | Vallejo-Perez MR, Sosa-Herrera JA, Navarro-Contreras HR, Alvarez-Preciado LG, Rodriguez-Vazquez AG, Lara-Avila JP. | Plants (Basel) | 10.3390/plants10081542 | 2021 | | |
| The Effect of Some Wild Grown Plant Extracts and Essential Oils on Pectobacterium betavasculorum: The Causative Agent of Bacterial Soft Rot and Vascular Wilt of Sugar Beet. | Rastgou M, Rezaee Danesh Y, Ercisli S, Sayyed RZ, El Enshasy HA, Dailin DJ, Alfarraj S, Ansari MJ. | Plants (Basel) | 10.3390/plants11091155 | 2022 | | |
| Antibacterial Activity of Defensive Secretions from the Lace Bug Stephanitis svensoni (Drake) (Hemiptera: Tingidae). | Shimizu N, Takahara C, Ogami H. | Insects | 10.3390/insects15040257 | 2024 | | |
| Evaluation of suitable reference genes for normalization of quantitative reverse transcription PCR analyses in Clavibacter michiganensis. | Jiang N, Lyu Q, Han S, Xu X, Walcott RR, Li J, Luo L. | Microbiologyopen | 10.1002/mbo3.928 | 2019 | | |
| Phytochemical Characterization of Phoradendron bollanum and Viscum album subs. austriacum as Mexican Mistletoe Plants with Antimicrobial Activity. | Garcia-Garcia JD, Anguiano-Cabello JC, Arredondo-Valdes R, Candido Del Toro CA, Martinez-Hernandez JL, Segura-Ceniceros EP, Govea-Salas M, Gonzalez-Chavez ML, Ramos-Gonzalez R, Esparza-Gonzalez SC, Ascacio-Valdes JA, Lopez-Badillo CM, Ilyina A. | Plants (Basel) | 10.3390/plants10071299 | 2021 | | |
| Synthetic Oligopeptides Mimicking gamma-Core Regions of Cysteine-Rich Peptides of Solanum lycopersicum Possess Antimicrobial Activity against Human and Plant Pathogens. | Slezina MP, Istomina EA, Kulakovskaya EV, Abashina TN, Odintsova TI. | Curr Issues Mol Biol | 10.3390/cimb43030087 | 2021 | | |
| Characterization of a Disease-Suppressive Isolate of Lysobacter enzymogenes with Broad Antagonistic Activity against Bacterial, Oomycetal and Fungal Pathogens in Different Crops. | Drenker C, El Mazouar D, Bucker G, Weisshaupt S, Wienke E, Koch E, Kunz S, Reineke A, Rondot Y, Linkies A. | Plants (Basel) | 10.3390/plants12030682 | 2023 | | |
| Exploring the potential of Bornean polypore fungi as biological control agents against pathogenic Ganoderma boninense causing basal stem rot in oil palm. | Darlis D, Jalloh MB, Chin CFS, Basri NKM, Besar NA, Ahmad K, Rakib MRM. | Sci Rep | 10.1038/s41598-023-37507-0 | 2023 | | |
| Genetics | Endophytic and Epiphytic Microorganisms as Biocontrol Agents: Mechanisms, Applications, and Metagenomic Approaches in Tomato Cultivation. | Rakhalaru P, Mampholo BM, Mamphogoro TP, Thantsha MS. | Molecules | 10.3390/molecules30183816 | 2025 | |
| The coupling effect of Penicillium baileys W2 in the Aspergillus flavus inhibition and peanut growth promotion. | Wang Q, Shan S, Sun Q, Zhao X, Yuan C, Mou Y, Wang J, Yan C, Wang Q, Rui Q, Li C. | Synth Syst Biotechnol | 10.1016/j.synbio.2025.09.003 | 2026 | | |
| A mechanized two-step cleaning and disinfection process strongly minimizes pathogen contamination on wooden potato storage boxes | Fehres H, Linkies A. | Crop Prot | 10.1016/j.cropro.2017.09.016 | 2018 | | |
| The Variability of Thymol and Carvacrol Contents Reveals the Level of Antibacterial Activity of the Essential Oils from Different Accessions of Oliveria decumbens. | Khoshbakht T, Karami A, Tahmasebi A, Maggi F. | Antibiotics (Basel) | 10.3390/antibiotics9070409 | 2020 | | |
| Development of a tomato plant resistant to Clavibacter michiganensis using the endolysin gene of bacteriophage CMP1 as a transgene | Wittmann J, Brancato C, Berendzen KW, Dreiseikelmann B. | Plant Pathol | 2016 | | ||
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| Identification of Quantitative Trait Loci for Goss's Wilt of Maize | Cooper JS, Balint-Kurti PJ, Jamann TM. | Crop Sci | 10.2135/cropsci2017.10.0618 | 2018 | | |
| Pathogenicity | Effect of Selenium-containing Biocomposites from Medicinal Mushrooms on the Potato Ring Rot Causative Agent. | Perfileva AI, Tsivileva OM, Drevko YB, Ibragimova DN, Koftin OV. | Dokl Biol Sci | 10.1134/s0012496618020072 | 2018 | |
| Metabolism | Evaluating the biocontrol potential of Canadian strain Bacillus velezensis 1B-23 via its surfactin production at various pHs and temperatures. | Li MSM, Piccoli DA, McDowell T, MacDonald J, Renaud J, Yuan ZC. | BMC Biotechnol | 10.1186/s12896-021-00690-x | 2021 | |
| Transcriptome | Transcriptome analysis of Clavibacter michiganensis subsp. michiganensis-infected tomatoes: a role of salicylic acid in the host response. | Yokotani N, Hasegawa Y, Sato M, Hirakawa H, Kouzai Y, Nishizawa Y, Yamamoto E, Naito Y, Isobe S. | BMC Plant Biol | 10.1186/s12870-021-03251-8 | 2021 | |
| Secondary spread of Clavibacter michiganensis subsp. michiganensis in nurseries and the conditions leading to infection of tomato seedlings | Frenkel O, Bornestein M, Shulhani R, Sharabani G, Sofer M, Abo-Moch F, Lofthouse M, Manulis-Sasson S, Shtienberg D. | Eur J Plant Pathol | 10.1007/s10658-015-0795-4 | 2016 | | |
| Factors Affecting the Development and Severity of Goss's Bacterial Wilt and Leaf Blight of Corn, Caused by Clavibacter michiganensis subsp. nebraskensis. | Langemeier CB, Robertson AE, Wang D, Jackson-Ziems TA, Kruger GR. | Plant Dis | 10.1094/pdis-01-15-0038-re | 2017 | | |
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| Genome-wide association study identifies quantitative trait loci associated with resistance to Verticillium dahliae race 3 in tomato. | Adhikari TB, Olukolu BA, Pandey A, Philbrick AN, Panthee DR, Shekasteband R, Gardner RG, Dean RA, Louws FJ. | Plant Genome | 10.1002/tpg2.70132 | 2025 | | |
| Biostimulation of Bacteria in Liquid Culture for Identification of New Antimicrobial Compounds. | Mirzaee H, Ariens E, Blaskovich MAT, Clark RJ, Schenk PM. | Pharmaceuticals (Basel) | 10.3390/ph14121232 | 2021 | | |
| The PKS-NRPS Gene BBA_09856 Deletion Mutant of Beauveria bassiana Enhanced Its Virulence Against Ostrinia furnacalis Larvae and Strengthened the Host Plant's Resistance to Botrytis cinerea as an Endotype. | Wang Y, Zou X, Zhu X, Qi J, Liu J, Zhang Z. | J Fungi (Basel) | 10.3390/jof11030197 | 2025 | | |
| Overcoming Dormancy of Black Locust (Robinia pseudoacacia L.) Seeds Using Various Non-Thermal Plasma Sources. | Scholtz V, Jiresova J, Khun J, Czapka T, Julak J, Klenivskyi M. | Plants (Basel) | 10.3390/plants14050728 | 2025 | | |
| Development of enhanced selective media for detection of Vibrio parahaemolyticus in oysters. | Yoon JH, Bae YM, Song H, Lee S, Moon SK, Oh SW, Lee SY. | Food Sci Biotechnol | 10.1007/s10068-021-00877-0 | 2021 | | |
| Epiphytic Curtobacterium flaccumfaciens strains isolated from symptomless solanaceous vegetables are pathogenic on leguminous but not on solanaceous plants | Osdaghi E, Taghavi SM, Hamzehzarghani H, Fazliarab A, Harveson RM, Tegli S, Lamichhane JR. | Plant Pathol | 10.1111/ppa.12730 | 2018 | | |
| Volatile Organic Compounds Produced by Bacillus sp. Strain R2 Inhibit Aspergillus flavus Growth In Vitro and in Unhulled Rice. | Wang Q, Zhang K, Yu L, Lin Q, Zhou W. | Foods | 10.3390/foods13182898 | 2024 | | |
| Enzymology | Matrix approach to the simultaneous detection of multiple potato pathogens by real-time PCR. | Nikitin MM, Statsyuk NV, Frantsuzov PA, Dzhavakhiya VG, Golikov AG. | J Appl Microbiol | 10.1111/jam.13686 | 2018 | |
| Genome Analysis and Development of a Multiplex TaqMan Real-Time PCR for Specific Identification and Detection of Clavibacter michiganensis subsp. nebraskensis. | Tambong JT, Xu R, Daayf F, Briere S, Bilodeau GJ, Tropiano R, Hartke A, Reid LM, Cott M, Cote T, Agarkova I. | Phytopathology | 10.1094/phyto-05-16-0188-r | 2016 | | |
| Chemical Composition and Antimicrobial Properties of Mentha × piperita cv. 'Kristinka' Essential Oil. | Camele I, Grulova D, Elshafie HS. | Plants (Basel) | 10.3390/plants10081567 | 2021 | | |
| Induction of the viable but nonculturable state in Clavibacter michiganensis subsp. michiganensis and in planta resuscitation of the cells on tomato seedlings | Jiang N, Lv QY, Xu X, Cao YS, Walcott RR, Li JQ, Luo LX. | Plant Pathol | 2016 | | ||
| Clonal populations of Clavibacter michiganensis subsp. michiganensis are responsible for the outbreaks of bacterial canker in greenhouse tomatoes in Italy | Ialacci GM, Bella P, Licciardello G, Strano CP, Eichenlaub R, Gartemann K-, La Rosa R, Catara V. | Plant Pathol | 2016 | | ||
| Antibacterial Activity of Essential Oils and Trametes versicolor Extract against Clavibacter michiganensis subsp. michiganensis and Ralstonia solanacearum for Seed Treatment and Development of a Rapid In Vivo Assay. | Orzali L, Valente MT, Scala V, Loreti S, Pucci N. | Antibiotics (Basel) | 10.3390/antibiotics9090628 | 2020 | | |
| Adsorption of Recombinant Human beta-Defensin 2 and Two Mutants on Mesoporous Silica Nanoparticles and Its Effect against Clavibacter michiganensis subsp. michiganensis. | Marcelino-Perez G, Ruiz-Medrano R, Gallardo-Hernandez S, Xoconostle-Cazares B. | Nanomaterials (Basel) | 10.3390/nano11082144 | 2021 | | |
| Variables Associated with Severity of Bacterial Canker and Wilt Caused by Clavibacter michiganensis subsp. michiganensis in Tomato Greenhouses. | Blank L, Cohen Y, Borenstein M, Shulhani R, Lofthouse M, Sofer M, Shtienberg D. | Phytopathology | 10.1094/phyto-07-15-0159-r | 2016 | | |
| Soybean Nodule-Associated Non-Rhizobial Bacteria Inhibit Plant Pathogens and Induce Growth Promotion in Tomato. | Tokgoz S, Lakshman DK, Ghozlan MH, Pinar H, Roberts DP, Mitra A. | Plants (Basel) | 10.3390/plants9111494 | 2020 | | |
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| Clavibacter michiganensis Downregulates Photosynthesis and Modifies Monolignols Metabolism Revealing a Crosstalk with Tomato Immune Responses. | Tsitsekian D, Daras G, Karamanou K, Templalexis D, Koudounas K, Malliarakis D, Koufakis T, Chatzopoulos D, Goumas D, Ntoukakis V, Hatzopoulos P, Rigas S. | Int J Mol Sci | 10.3390/ijms22168442 | 2021 | | |
| Comparison of Susceptible and Resistant Maize Hybrids to Colonization by Clavibacter michiganensis subsp. nebraskensis. | Mbofung GCY, Sernett J, Horner HT, Robertson AE. | Plant Dis | 10.1094/pdis-04-15-0448-re | 2016 | | |
| Construction of a High-Density Genetic Linkage Map and QTL Mapping for Stem Rot Resistance in Passion Fruit (Passiflora edulis Sims). | Wu Y, Huang W, Liu J, Zhou J, Tian Q, Xia X, Mou H, Yang X. | Genes (Basel) | 10.3390/genes16010096 | 2025 | | |
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| Effect of Bactericides on Population Sizes and Spread of Clavibacter michiganensis subsp. michiganensis on Tomatoes in the Greenhouse and on Disease Development and Crop Yield in the Field. | Hausbeck MK, Bell J, Medina-Mora C, Podolsky R, Fulbright DW. | Phytopathology | 10.1094/phyto.2000.90.1.38 | 2000 | | |
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| Selection of polymerase chain reaction primers from an RNA intergenic spacer region for specific detection of Clavibacter michiganensis subsp. sepedonicus | Li X, De Boer SH. | Phytopathology | 10.1094/phyto-85-837 | 1995 | | |
| Clavibacter michiganensis subsp. Sepedonicus Elicits a Hypersensitive Response in Tobacco and Secretes Hypersensitive Response-Inducing Protein(s). | Nissinen R, Lai FM, Laine MJ, Bauer PJ, Reilley AA, Li X, De Boer SH, Ishimaru CA, Metzler MC. | Phytopathology | 10.1094/phyto.1997.87.7.678 | 1997 | | |
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| Origanum dubium (Cypriot Oregano) as a Promising Sanitizing Agent against Salmonella enterica and Listeria monocytogenes on Tomato and Cucumber Fruits. | Xylia P, Chrysargyris A, Miltiadous P, Tzortzakis N. | Biology (Basel) | 10.3390/biology11121772 | 2022 | | |
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| Development of a PCR-based, genetic marker resource for the tomato-like nightshade relative, Solanum lycopersicoides using whole genome sequence analysis. | Mangat PK, Gannaban RB, Singleton JJ, Angeles-Shim RB. | PLoS One | 10.1371/journal.pone.0242882 | 2020 | | |
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| Towards an Eco-Friendly Coffee Rust Control: Compilation of Natural Alternatives from a Nutritional and Antifungal Perspective. | Castillo NET, Acosta YA, Parra-Arroyo L, Martinez-Prado MA, Rivas-Galindo VM, Iqbal HMN, Bonaccorso AD, Melchor-Martinez EM, Parra-Saldivar R. | Plants (Basel) | 10.3390/plants11202745 | 2022 | | |
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| Bioactive 3-Decalinoyltetramic Acids Derivatives From a Marine-Derived Strain of the Fungus Fusarium equiseti D39. | Zhao D, Han X, Wang D, Liu M, Gou J, Peng Y, Liu J, Li Y, Cao F, Zhang C. | Front Microbiol | 10.3389/fmicb.2019.01285 | 2019 | | |
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| Genetics | Genome features of the endophytic actinobacterium Micromonospora lupini strain Lupac 08: on the process of adaptation to an endophytic life style? | Trujillo ME, Bacigalupe R, Pujic P, Igarashi Y, Benito P, Riesco R, Medigue C, Normand P. | PLoS One | 10.1371/journal.pone.0108522 | 2014 | |
| A novel multilocus variable number tandem repeat analysis typing scheme for African phylotype III strains of the Ralstonia solanacearum species complex. | Ravelomanantsoa S, Robene I, Chiroleu F, Guerin F, Poussier S, Pruvost O, Prior P. | PeerJ | 10.7717/peerj.1949 | 2016 | | |
| Metabolism | Hydroxycinnamic Acid Degradation, a Broadly Conserved Trait, Protects Ralstonia solanacearum from Chemical Plant Defenses and Contributes to Root Colonization and Virulence. | Lowe TM, Ailloud F, Allen C. | Mol Plant Microbe Interact | 10.1094/mpmi-09-14-0292-fi | 2015 | |
| Enzymology | Development of SCAR markers for rapid and specific detection of Pseudomonas syringae pv. morsprunorum races 1 and 2, using conventional and real-time PCR. | Kaluzna M, Albuquerque P, Tavares F, Sobiczewski P, Pulawska J. | Appl Microbiol Biotechnol | 10.1007/s00253-016-7295-0 | 2016 | |
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| Metabolism | Antimicrobial nodule-specific cysteine-rich peptides induce membrane depolarization-associated changes in the transcriptome of Sinorhizobium meliloti. | Tiricz H, Szucs A, Farkas A, Pap B, Lima RM, Lima RM, Maroti G, Kondorosi E, Kereszt A. | Appl Environ Microbiol | 10.1128/aem.01791-13 | 2013 | |
| Metabolism | Impact of 4 Lactobacillus plantarum capsular polysaccharide clusters on surface glycan composition and host cell signaling. | Remus DM, van Kranenburg R, van Swam II, Taverne N, Bongers RS, Wels M, Wells JM, Bron PA, Kleerebezem M. | Microb Cell Fact | 10.1186/1475-2859-11-149 | 2012 | |
| Draft Genome Sequences of Xanthomonas sacchari and Two Banana-Associated Xanthomonads Reveal Insights into the Xanthomonas Group 1 Clade. | Studholme DJ, Wasukira A, Paszkiewicz K, Aritua V, Thwaites R, Smith J, Grant M. | Genes (Basel) | 10.3390/genes2041050 | 2011 | | |
| Pathogenicity | Defence responses regulated by jasmonate and delayed senescence caused by ethylene receptor mutation contribute to the tolerance of petunia to Botrytis cinerea. | Wang H, Liu G, Li C, Powell AL, Reid MS, Zhang Z, Jiang CZ. | Mol Plant Pathol | 10.1111/mpp.12017 | 2013 | |
| Top 10 plant pathogenic bacteria in molecular plant pathology. | Mansfield J, Genin S, Magori S, Citovsky V, Sriariyanum M, Ronald P, Dow M, Verdier V, Beer SV, Machado MA, Toth I, Salmond G, Foster GD. | Mol Plant Pathol | 10.1111/j.1364-3703.2012.00804.x | 2012 | | |
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| Metabolism | Molecular characterization of a serine protease Pro1 from Plasmodiophora brassicae that stimulates resting spore germination. | Feng J, Hwang R, Hwang SF, Strelkov SE, Gossen BD, Zhou QX, Peng G. | Mol Plant Pathol | 10.1111/j.1364-3703.2010.00623.x | 2010 | |
| Phylogeny | Taxonomy, Physiology, and Natural Products of Actinobacteria. | Barka EA, Vatsa P, Sanchez L, Gaveau-Vaillant N, Jacquard C, Meier-Kolthoff JP, Klenk HP, Clement C, Ouhdouch Y, van Wezel GP. | Microbiol Mol Biol Rev | 10.1128/mmbr.00019-15 | 2016 | |
| Phylogeny | Isolation of novel ultramicrobacteria classified as actinobacteria from five freshwater habitats in Europe and Asia. | Hahn MW, Lunsdorf H, Wu Q, Schauer M, Hofle MG, Boenigk J, Stadler P. | Appl Environ Microbiol | 10.1128/aem.69.3.1442-1451.2003 | 2003 | |
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| Enzymology | Cyclic Di-GMP modulates the disease progression of Erwinia amylovora. | Edmunds AC, Castiblanco LF, Sundin GW, Waters CM. | J Bacteriol | 10.1128/jb.02068-12 | 2013 | |
| Ralstonia solanacearum extracellular polysaccharide is a specific elicitor of defense responses in wilt-resistant tomato plants. | Milling A, Babujee L, Allen C. | PLoS One | 10.1371/journal.pone.0015853 | 2011 | | |
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| Metabolism | Crystal structure and activity of Bacillus subtilis YoaJ (EXLX1), a bacterial expansin that promotes root colonization. | Kerff F, Amoroso A, Herman R, Sauvage E, Petrella S, Filee P, Charlier P, Joris B, Tabuchi A, Nikolaidis N, Cosgrove DJ. | Proc Natl Acad Sci U S A | 10.1073/pnas.0809382105 | 2008 | |
| Identification and application of plasmids suitable for transfer of foreign DNA to members of the genus Gordonia. | Arenskotter M, Baumeister D, Kalscheuer R, Steinbuchel A. | Appl Environ Microbiol | 10.1128/aem.69.8.4971-4974.2003 | 2003 | | |
| Construction strategy for an internal amplification control for real-time diagnostic assays using nucleic Acid sequence-based amplification: development and clinical application. | Rodriguez-Lazaro D, D'Agostino M, Pla M, Cook N. | J Clin Microbiol | 10.1128/jcm.42.12.5832-5836.2004 | 2004 | | |
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| Are cellulosome scaffolding protein CipC and CBM3-containing protein HycP, involved in adherence of Clostridium cellulolyticum to cellulose? | Ferdinand PH, Borne R, Trotter V, Pages S, Tardif C, Fierobe HP, Perret S. | PLoS One | 10.1371/journal.pone.0069360 | 2013 | | |
| Metabolism | Characterization of S-triazine herbicide metabolism by a Nocardioides sp. isolated from agricultural soils. | Topp E, Mulbry WM, Zhu H, Nour SM, Cuppels D. | Appl Environ Microbiol | 10.1128/aem.66.8.3134-3141.2000 | 2000 | |
| Metabolism | A fungal member of the Arabidopsis thaliana phyllosphere antagonizes Albugo laibachii via a GH25 lysozyme. | Eitzen K, Sengupta P, Kroll S, Kemen E, Doehlemann G. | Elife | 10.7554/elife.65306 | 2021 | |
| Metabolism | Shedding some light over the floral metabolism by arum lily (Zantedeschia aethiopica) spathe de novo transcriptome assembly. | Candido Ede S, Fernandes Gda R, de Alencar SA, Cardoso MH, Lima SM, Miranda Vde J, Porto WF, Nolasco DO, de Oliveira-Junior NG, Barbosa AE, Pogue RE, Rezende TM, Dias SC, Franco OL. | PLoS One | 10.1371/journal.pone.0090487 | 2014 | |
| Structure and expression of GSL1 and GSL2 genes encoding gibberellin stimulated-like proteins in diploid and highly heterozygous tetraploid potato reveals their highly conserved and essential status. | Meiyalaghan S, Thomson SJ, Fiers MW, Barrell PJ, Latimer JM, Mohan S, Jones EE, Conner AJ, Jacobs JM. | BMC Genomics | 10.1186/1471-2164-15-2 | 2014 | | |
| Metabolism | Structure and mechanism of iron translocation by a Dps protein from Microbacterium arborescens. | Pesek J, Buchler R, Albrecht R, Boland W, Zeth K. | J Biol Chem | 10.1074/jbc.m111.246108 | 2011 | |
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| Inactivation of the ketoreductase gilU gene of the gilvocarcin biosynthetic gene cluster yields new analogues with partly improved biological activity. | Liu T, Kharel MK, Zhu L, Bright SA, Mattingly C, Adams VR, Rohr J. | Chembiochem | 10.1002/cbic.200800348 | 2009 | | |
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| Genome sequence of the Fleming strain of Micrococcus luteus, a simple free-living actinobacterium. | Young M, Artsatbanov V, Beller HR, Chandra G, Chater KF, Dover LG, Goh EB, Kahan T, Kaprelyants AS, Kyrpides N, Lapidus A, Lowry SR, Lykidis A, Mahillon J, Markowitz V, Mavromatis K, Mukamolova GV, Oren A, Rokem JS, Smith MC, Young DI, Greenblatt CL. | J Bacteriol | 10.1128/jb.01254-09 | 2010 | | |
| Metabolism | Melamine deaminase and atrazine chlorohydrolase: 98 percent identical but functionally different. | Seffernick JL, de Souza ML, Sadowsky MJ, Wackett LP. | J Bacteriol | 10.1128/jb.183.8.2405-2410.2001 | 2001 | |
| Phylogeny | Ecotypes of planktonic actinobacteria with identical 16S rRNA genes adapted to thermal niches in temperate, subtropical, and tropical freshwater habitats. | Hahn MW, Pockl M. | Appl Environ Microbiol | 10.1128/aem.71.2.766-773.2005 | 2005 | |
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| Pathogenicity | The plant pathogen Pseudomonas syringae pv. tomato is genetically monomorphic and under strong selection to evade tomato immunity. | Cai R, Lewis J, Yan S, Liu H, Clarke CR, Campanile F, Almeida NF, Studholme DJ, Lindeberg M, Schneider D, Zaccardelli M, Setubal JC, Morales-Lizcano NP, Bernal A, Coaker G, Baker C, Bender CL, Leman S, Vinatzer BA. | PLoS Pathog | 10.1371/journal.ppat.1002130 | 2011 | |
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| Metabolism | Unique posttranslational modifications of chitin-binding lectins of Entamoeba invadens cyst walls. | Van Dellen KL, Chatterjee A, Ratner DM, Magnelli PE, Cipollo JF, Steffen M, Robbins PW, Samuelson J. | Eukaryot Cell | 10.1128/ec.5.5.836-848.2006 | 2006 | |
| Genetic diversity of african and worldwide strains of ralstonia solanacearum as determined by PCR-restriction fragment length polymorphism analysis of the hrp gene region | Poussier S, Vandewalle P, Luisetti J. | Appl Environ Microbiol | 10.1128/aem.65.5.2184-2194.1999 | 1999 | | |
| A novel immunity system for bacterial nucleic acid degrading toxins and its recruitment in various eukaryotic and DNA viral systems. | Zhang D, Iyer LM, Aravind L. | Nucleic Acids Res | 10.1093/nar/gkr036 | 2011 | | |
| Phylogeny | Oligonucleotide array for identification and detection of pythium species. | Tambong JT, de Cock AW, Tinker NA, Levesque CA. | Appl Environ Microbiol | 10.1128/aem.72.4.2691-2706.2006 | 2006 | |
| Metabolism | Cohesion group approach for evolutionary analysis of aspartokinase, an enzyme that feeds a branched network of many biochemical pathways. | Lo CC, Bonner CA, Xie G, D'Souza M, Jensen RA. | Microbiol Mol Biol Rev | 10.1128/mmbr.00024-09 | 2009 | |
| Comparative Genome Analyses of Clavibacter michiganensis Type Strain LMG7333(T) Reveal Distinct Gene Contents in Plasmids From Other Clavibacter Species. | Oh EJ, Hwang IS, Park IW, Oh CS | Front Microbiol | 10.3389/fmicb.2021.793345 | 2022 | | |
| Novel galactofuranan and pyruvylated galactomannan in the cell wall of Clavibacter michiganensis subsp. michiganensis VKM Ac-1403(T). | Kim D, Shashkov AS, Dmitrenok AS, Potekhina NV, Senchenkova SN, Dorofeeva LV, Evtushenko LI, Tul'skaya EM | Carbohydr Res | 10.1016/j.carres.2021.108247 | 2021 | | |
| Enzymology | Functional Characterization of Two Cellulase Genes in the Gram-Positive Pathogenic Bacterium Clavibacter michiganensis for Wilting in Tomato. | Hwang IS, Oh EJ, Lee HB, Oh CS | Mol Plant Microbe Interact | 10.1094/MPMI-08-18-0227-R | 2019 | |
| Genetics | Genome Sequences for Multiple Clavibacter Strains from Different Subspecies. | Li XS, Yuan XK | Genome Announc | 10.1128/genomeA.00721-17 | 2017 | |
| First Report of Bacterial Canker of Tomato Caused by Clavibacter michiganensis subsp. michiganensis in Korea. | Myung IS, Kim DG, An SH, Lee YK, Kim WG | Plant Dis | 10.1094/PDIS-92-10-1472A | 2008 | | |
| Genetics | Elevation of Clavibacter michiganensis subsp. californiensis to species level as Clavibacter californiensis sp. nov., merging and re-classification of Clavibacter michiganensis subsp. chilensis and Clavibacter michiganensis subsp. phaseoli as Clavibacter phaseoli sp. nov. based on complete genome in silico analyses. | Arizala D, Dobhal S, Alvarez AM, Arif M. | Int J Syst Evol Microbiol | 10.1099/ijsem.0.005427 | 2022 | |
| Phylogeny | Description of Clavibacter zhangzhiyongii sp. nov., a phytopathogenic actinobacterium isolated from barley seeds, causing leaf brown spot and decline. | Tian Q, Chuan J, Sun X, Zhou A, Wang L, Zou J, Zhao W, Li X. | Int J Syst Evol Microbiol | 10.1099/ijsem.0.004786 | 2021 | |
| Phylogeny | Clavibacter michiganensis subsp. capsici subsp. nov., causing bacterial canker disease in pepper. | Oh EJ, Bae C, Lee HB, Hwang IS, Lee HI, Yea MC, Yim KO, Lee S, Heu S, Cha JS, Oh CS. | Int J Syst Evol Microbiol | 10.1099/ijsem.0.001311 | 2016 | |
| Phylogeny | Clavibacter michiganensis subsp. phaseoli subsp. nov., pathogenic in bean. | Gonzalez AJ, Trapiello E. | Int J Syst Evol Microbiol | 10.1099/ijs.0.058099-0 | 2014 | |
| The Predatory Myxobacterium Citreicoccus inhibens gen. nov. sp. nov. Showed Antifungal Activity and Bacteriolytic Property against Phytopathogens. | Zhou Y, Yi S, Zang Y, Yao Q, Zhu H. | Microorganisms | 10.3390/microorganisms9102137 | 2021 | | |
| Transcriptome | Molecular Analysis of Bacterial Isolates From Necrotic Wheat Leaf Lesions Caused by Xanthomonas translucens, and Description of Three Putative Novel Species, Sphingomonas albertensis sp. nov., Pseudomonas triticumensis sp. nov. and Pseudomonas foliumensis sp. nov. | Tambong JT, Xu R, Gerdis S, Daniels GC, Chabot D, Hubbard K, Harding MW. | Front Microbiol | 10.3389/fmicb.2021.666689 | 2021 | |
| Phylogeny | Diversity of grass-associated Microbacteriaceae isolated from the phyllosphere and litter layer after mulching the sward; polyphasic characterization of Subtercola pratensis sp. nov., Curtobacterium herbarum sp. nov. and Plantibacter flavus gen. nov., sp. nov. | Behrendt U, Ulrich A, Schumann P, Naumann D, Suzuki KI. | Int J Syst Evol Microbiol | 10.1099/00207713-52-5-1441 | 2002 | |
| Phylogeny | Subtercola boreus gen. nov., sp. nov. and Subtercola frigoramans sp. nov., two new psychrophilic actinobacteria isolated from boreal groundwater. | Mannisto MK, Schumann P, Rainey FA, Kampfer P, Tsitko I, Tiirola MA, Salkinoja-Salonen MS. | Int J Syst Evol Microbiol | 10.1099/00207713-50-5-1731 | 2000 | |
How to citeIf you want to cite this particular strain cite the following doi:
https://doi.org/10.13145/bacdive7289.20251217.10
When using BacDive for research please cite the following paper
BacDive in 2025: the core database for prokaryotic strain data
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