Name: Agrococcus versicolor K 114/01
Creator: BacDive
License: http://creativecommons.org/licenses/by-nc/4.0/

Strain identifier

BacDive ID: 7257

Type strain:

Species: Agrococcus versicolor

Strain Designation: K 114/01

Culture col. no.: DSM 19812, LMG 24386, CCUG 58092, JCM 16026

Strain history: LMG 24386 <-- U. Behrendt K 114/01.

NCBI tax ID(s): 501482 (species)

SI-ID 323186

LMG 24386, DSM 19812, JCM 16026, CCUG 58092

Section

Agrococcus versicolor K 114/01 is an aerobe, mesophilic, Gram-positive bacterium that was isolated from surface of potato leaves.

Gram-positive
ovoid-shaped
aerobe
mesophilic
16S sequence
Bacteria

Information on the name and the taxonomic classification. Name and taxonomic classification

	Last LPSN update	14-12-2023 (DD-MM-YYYY)
	Domain	"Bacteria"
	Phylum	*Actinomycetota*
	Class	*Actinomycetes*
	Order	*Micrococcales*
	Family	*Microbacteriaceae*
	Genus	*Agrococcus*
	Species	**Agrococcus versicolor**
	Full Scientific Name (LPSN)	Agrococcus versicolor Behrendt et al. 2008

Information on morphological and physiological properties Morphology

[Ref.: #31208]	Gram stain	positive

[Ref.: #31208]	Cell length	0.8-1.2 µm

[Ref.: #31208]	Cell width	0.5-0.6 µm

[Ref.: #31208]	Cell shape	ovoid-shaped

[Ref.: #31208]	Motility	no

[Ref.: #18616]	Colony color	Vermillion (2002)
[Ref.: #18616]	Incubation period	10-14 days
[Ref.: #18616]	Cultivation medium used	ISP 2

[Ref.: #18616]	Colony color	Vermillion (2002)
[Ref.: #18616]	Incubation period	10-14 days
[Ref.: #18616]	Cultivation medium used	ISP 3

[Ref.: #18616]	Colony color	Vermillion (2002)
[Ref.: #18616]	Incubation period	10-14 days
[Ref.: #18616]	Cultivation medium used	ISP 4

[Ref.: #18616]	Colony color	Vermillion (2002)
[Ref.: #18616]	Incubation period	10-14 days
[Ref.: #18616]	Cultivation medium used	ISP 5

[Ref.: #18616]	Colony color	Vermillion (2002)
[Ref.: #18616]	Incubation period	10-14 days
[Ref.: #18616]	Cultivation medium used	ISP 6

[Ref.: #18616]	Colony color	Vermillion (2002)
[Ref.: #18616]	Incubation period	10-14 days
[Ref.: #18616]	Cultivation medium used	ISP 7

[Ref.: #31208]

Pigment production

yes

[Ref.: #18616]	Multicellular complex forming ability	no
[Ref.: #18616]	Medium Name (multicellularity)	ISP 2

[Ref.: #18616]	Multicellular complex forming ability	no
[Ref.: #18616]	Medium Name (multicellularity)	ISP 3

[Ref.: #18616]	Multicellular complex forming ability	no
[Ref.: #18616]	Medium Name (multicellularity)	ISP 4

[Ref.: #18616]	Multicellular complex forming ability	no
[Ref.: #18616]	Medium Name (multicellularity)	ISP 5

[Ref.: #18616]	Multicellular complex forming ability	no
[Ref.: #18616]	Medium Name (multicellularity)	ISP 6

[Ref.: #18616]	Multicellular complex forming ability	no
[Ref.: #18616]	Medium Name (multicellularity)	ISP 7

Information on culture and growth conditions Culture and growth conditions

[Ref.: #8331]

Culture medium

TRYPTICASE SOY YEAST EXTRACT MEDIUM (DSMZ Medium 92)

[Ref.: #8331]

Culture medium growth

[Ref.: #8331]

Culture medium link

Medium recipe at MediaDive

[Ref.: #8331]

Culture medium composition

expand / minimize

[Ref.: #18616]

Culture medium

ISP 2

[Ref.: #18616]

Culture medium growth

[Ref.: #18616]

Culture medium composition

expand / minimize

[Ref.: #18616]

Culture medium

ISP 3

[Ref.: #18616]

Culture medium growth

[Ref.: #18616]

Culture medium composition

expand / minimize

[Ref.: #18616]

Culture medium

ISP 4

[Ref.: #18616]

Culture medium growth

[Ref.: #18616]

Culture medium composition

expand / minimize

[Ref.: #18616]

Culture medium

ISP 5

[Ref.: #18616]

Culture medium growth

[Ref.: #18616]

Culture medium composition

expand / minimize

[Ref.: #18616]

Culture medium

ISP 6

[Ref.: #18616]

Culture medium growth

[Ref.: #18616]

Culture medium composition

expand / minimize

[Ref.: #18616]

Culture medium

ISP 7

[Ref.: #18616]

Culture medium growth

[Ref.: #18616]

Culture medium composition

expand / minimize

		Temperature
[Ref.: #8331]	growth	28 °C
[Ref.: #18616]	optimum	28 °C
[Ref.: #31208]	growth	21 °C
[Ref.: #31208]	optimum	21 °C
[Ref.: #61592]	growth	30 °C
[Ref.: #67770]	growth	20 °C

[Ref.: #8331]	Temperature range	mesophilic
[Ref.: #18616]	Temperature range	mesophilic
[Ref.: #31208]	Temperature range	psychrophilic
[Ref.: #61592]	Temperature range	mesophilic
[Ref.: #67770]	Temperature range	psychrophilic

	pH	Kind of pH		pH
[Ref.: #31208]			optimum	7
[Ref.: #31208]			growth	7

Information on physiology and metabolism Physiology and metabolism

[Ref.: #31208]	Oxygen tolerance	aerobe
[Ref.: #61592]	Oxygen tolerance	aerobe

[Ref.: #31208]

Ability of spore formation

	Halophily	Salt	Tested relation		Salt conc.
[Ref.: #31208]		NaCl		growth	01-02	%
[Ref.: #31208]		NaCl		optimum	01-02	%

[Ref.: #31208]	Observation	aggregates in chains
[Ref.: #67770]	Observation	quinones: MK-10, MK-11, MK-8, MK-9 (16:16:4:2)

	Metabolite	Utilization activity	Kind of utilization tested
[Ref.: #31208]	arabinose ChEBI	+	carbon source
[Ref.: #68379]	D-glucose ChEBI	-	fermentation	* from API Coryne
[Ref.: #68379]	D-mannitol ChEBI	-	fermentation	* from API Coryne
[Ref.: #68379]	D-ribose ChEBI	-	fermentation	* from API Coryne
[Ref.: #68379]	D-xylose ChEBI	-	fermentation	* from API Coryne
[Ref.: #31208]	dextrin ChEBI	+	carbon source
[Ref.: #68379]	esculin ChEBI	+	hydrolysis	* from API Coryne
[Ref.: #31208]	fructose ChEBI	+	carbon source
[Ref.: #68379]	gelatin ChEBI	+	hydrolysis	* from API Coryne
[Ref.: #31208]	gluconate ChEBI	+	carbon source
[Ref.: #31208]	glucose ChEBI	+	carbon source
[Ref.: #31208]	glycerol ChEBI	+	carbon source
[Ref.: #68379]	glycogen ChEBI	-	fermentation	* from API Coryne
[Ref.: #68379]	lactose ChEBI	-	fermentation	* from API Coryne
[Ref.: #68379]	maltose ChEBI	-	fermentation	* from API Coryne
[Ref.: #31208]	mannose ChEBI	+	carbon source
[Ref.: #31208]	N-acetylglucosamine ChEBI	+	carbon source
[Ref.: #68379]	nitrate ChEBI	-	reduction	* from API Coryne
[Ref.: #31208]	sucrose ChEBI	+	carbon source
[Ref.: #68379]	sucrose ChEBI	+	fermentation	* from API Coryne
[Ref.: #31208]	trehalose ChEBI	+	carbon source
[Ref.: #68379]	urea ChEBI	-	hydrolysis	* from API Coryne
[Ref.: #31208]	xylose ChEBI	+	carbon source
	Only first 10 entries are displayed. Click here to see all.

	Enzyme	Enzyme activity	EC number
[Ref.: #68382]	acid phosphatase	+	3.1.3.2	* from API zym
[Ref.: #68382]	alkaline phosphatase	+	3.1.3.1	* from API zym, API Coryne
[Ref.: #68382]	alpha-chymotrypsin	+	3.4.21.1	* from API zym
[Ref.: #68382]	alpha-fucosidase	-	3.2.1.51	* from API zym
[Ref.: #68382]	alpha-galactosidase	+	3.2.1.22	* from API zym
[Ref.: #68382]	alpha-glucosidase	+	3.2.1.20	* from API zym, API Coryne
[Ref.: #68382]	alpha-mannosidase	+	3.2.1.24	* from API zym
[Ref.: #68382]	beta-galactosidase	+	3.2.1.23	* from API zym, API Coryne
[Ref.: #68382]	beta-glucosidase	+	3.2.1.21	* from API zym, API Coryne
[Ref.: #68382]	beta-glucuronidase	+	3.2.1.31	* from API zym, API Coryne
[Ref.: #31208]	catalase	+	1.11.1.6
[Ref.: #68382]	cystine arylamidase	-	3.4.11.3	* from API zym
[Ref.: #68382]	esterase (C 4)	+		* from API zym
[Ref.: #68382]	esterase lipase (C 8)	+		* from API zym
[Ref.: #68379]	gelatinase	+		* from API Coryne
[Ref.: #68382]	leucine arylamidase	+	3.4.11.1	* from API zym
[Ref.: #68382]	lipase (C 14)	-		* from API zym
[Ref.: #68382]	N-acetyl-beta-glucosaminidase	-	3.2.1.52	* from API zym, API Coryne
[Ref.: #68382]	naphthol-AS-BI-phosphohydrolase	-		* from API zym
[Ref.: #68379]	pyrazinamidase	+	3.5.1.B15	* from API Coryne
[Ref.: #68379]	pyrrolidonyl arylamidase	+	3.4.19.3	* from API Coryne
[Ref.: #68382]	trypsin	-	3.4.21.4	* from API zym
[Ref.: #68379]	urease	-	3.5.1.5	* from API Coryne
[Ref.: #68382]	valine arylamidase	+		* from API zym
	Only first 10 entries are displayed. Click here to see all.

API® Coryne:

Note that the displayed test results represent raw data and therefore may deviate!

	API ID	Reduction of nitrateNIT	PyrazinamidasePYZ	Pyrrolidonyl arylamidasePYRA	Alkaline phosphatasePAL	beta-Glucuronidasebeta GUR	beta-Galactosidasebeta GAL	alpha-Glucosidasealpha GLU	N-Acetyl-beta-Glucosidasebeta NAG	Esculin hydrolysis/beta-GlucosidaseESC	Urease/urea hydrolysisURE	Gelatinase/gelatin hydrolysisGEL	Control fermentationControl	Fermentation of D-glucoseGLU	Fermentation of D-riboseRIB	Fermentation of D-xyloseXYL	Fermentation of D-mannitolMAN	Fermentation of maltoseMAL	Fermentation of lactoseLAC	Fermentation of sucroseSAC	Fermentation of glycogenGLYG	CatalaseCAT
[Ref.: #18616]	168	-	+	+	+	+	+	+	-	+	-	+	not determinedn.d.	-	-	-	-	-	-	+	-	not determinedn.d.

API® zym:

Note that the displayed test results represent raw data and therefore may deviate!

	API ID	Control	2-naphthyl phosphateAlkaline phosphatase	2-naphthyl butyrateEsterase (C 4)	2-naphtyl caprylateEsterase Lipase (C 8)	2-naphthyl myristateLipase (C 14)	L-leucyl-2-naphthylamideLeucine arylamidase	L-valyl-2-naphthylamideValine arylamidase	L-cystyl-2-naphthylamideCystine arylamidase	N-benzoyl-DL-arginine-2-naphthylamideTrypsin	N-glutaryl-phenylalanine-2-naphthylamidealpha- Chymotrypsin	2-naphthyl phosphateAcid phosphatase	Naphthol-AS-BI-phosphateNaphthol-AS-BI-phosphohydrolase	6-Br-2-naphthyl-alphaD-galactpyranosidealpha- Galactosidase	2-naphthyl-betaD-galactpyranosidebeta- Galactosidase	Naphthol-AS-BI-betaD-glucuronidebeta- Glucuronidase	2-naphthyl-alphaD-glucopyranosidealpha- Glucosidase	6-Br-2-naphthyl-betaD-glucopyranosidebeta- Glucosidase	1-naphthyl-N-acetyl-betaD-glucosaminideN-acetyl-beta- glucosaminidase	6-Br-2-naphthyl-alphaD-mannopyranosidealpha- Mannosidase	2-naphthyl-alphaL-fucopyranosidealpha- Fucosidase
[Ref.: #18616]	255	not determinedn.d.	+	+	+	-	+	+	-	-	+	+	-	+	+	+	+	+	-	+	-

Information on isolation source, the sampling and environmental conditions Isolation, sampling and environmental information

[Ref.: #8331]	Sample type/isolated from	surface of potato leaves
[Ref.: #8331]	Geographic location (country and/or sea, region)	Brandenburg, Dahnsdorf
[Ref.: #8331]	Country	Germany
[Ref.: #8331]	Country ISO 3 Code	DEU
[Ref.: #8331]	Continent	Europe

[Ref.: #61592]	Sample type/isolated from	Phyllosphere of potato plants (leaves)
[Ref.: #61592]	Geographic location (country and/or sea, region)	Dahnsdorf ? or Brandenburg ?
[Ref.: #61592]	Country	Germany
[Ref.: #61592]	Country ISO 3 Code	DEU
[Ref.: #61592]	Continent	Europe

[Ref.: #67770]	Sample type/isolated from	Phyllosphere of potato plants
[Ref.: #67770]	Geographic location (country and/or sea, region)	Dahnsdorf
[Ref.: #67770]	Country	Germany
[Ref.: #67770]	Country ISO 3 Code	DEU
[Ref.: #67770]	Continent	Europe
* marker position based on {}

Isolation sources categories

#Host	#Plants	#Herbaceous plants (Grass,Crops)
#Host Body-Site	#Plant	#Leaf (Phyllosphere)

What are isolation sources categories?

Information on possible application of the strain and its possible interaction with e.g. potential hosts Safety information

[Ref.: #8331]

Biosafety level

Risk group (German classification)
According to TRBA 466

Information on genomic background e.g. entries in nucleic sequence databass Sequence information

16S Sequence information:

	Sequence accession description	Seq. accession number	Sequence length (bp)	Sequence database	Associated NCBI tax ID
[Ref.: #8331]	Agrococcus versicolor partial 16S rRNA gene, type strain DSM 19812T	AM940157	1479	ENA	501482 tax ID

Availability in culture collections External links

[Ref.: #8331]

Culture collection no.

DSM 19812, LMG 24386, CCUG 58092, JCM 16026

[Ref.: #76709]

SI-ID 323186

Literature:

Topic	Title	Authors	Journal	DOI	Year
Phylogeny	Agrococcus versicolor sp. nov., an actinobacterium associated with the phyllosphere of potato plants.	Behrendt U, Schumann P, Ulrich A	Int J Syst Evol Microbiol	10.1099/ijs.0.2008/001610-0	2008	*

References

#8331

Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 19812

#18616

Wink, J.: Compendium of Actinobacteria. HZI-Helmholtz-Centre for Infection Research, Braunschweig .

#20215

Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )

#31208

Barberan A, Caceres Velazquez H, Jones S, Fierer N.: Hiding in Plain Sight: Mining Bacterial Species Records for Phenotypic Trait Information. mSphere 2: 2017 ( DOI 10.1128/mSphere.00237-17 , PubMed 28776041 ) - originally annotated from #27535 (see below)

#61592 Culture Collection University of Gothenburg (CCUG) ; Curators of the CCUG; CCUG 58092
#67770 Japan Collection of Microorganism (JCM) ; Curators of the JCM;

#68379

Automatically annotated from API Coryne .

#68382

Automatically annotated from API zym .

#76709

Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.: StrainInfo: A central database for resolving microbial strain identifiers . ( DOI 10.60712/SI-ID323186.1 )

#27535

IJSEM 2833 2008 ( DOI 10.1099/ijs.0.2008/001610-0 , PubMed 19060068 )

* These data were automatically processed and therefore are not curated

Change proposal

You found an error in BacDive? Please tell us about it!

Note that changes will be reviewed and judged. If your changes are legitimate, changes will occur within the next BacDive update. Only proposed changes supported by the according reference will be reviewed. The BacDive team reserves the right to reject proposed changes.

Search for species Agrococcus versicolor in external resources:
SILVA
BRENDA
PANGAEA
StrainInfo
GBIF