Paeniroseomonas aquatica (DSM 19438, CECT 7131, JCM 13556)

Name: Paeniroseomonas aquatica (DSM 19438, CECT 7131, JCM 13556)
Creator: BacDive
License: http://creativecommons.org/licenses/by/4.0/

BacDive ID 72

Type strain

Strain Designation TR53

Culture col. no. DSM 19438 CECT 7131 JCM 13556 TR53 NCIMB 14503 2 more

NCBI tax ID(s) 373043

Special Collections DSMZ JCM Literature strains CIP

History DSMZ <- JCM/RIKEN <- A. Ventosa, Univ. Seville, Dept. Microbiol. Parasitol., Spain; TR53 JCM <-- A. Ventosa TR53. CIP <- 2006, CECT <- A. Ventosa: strain TR53

Links

Paeniroseomonas aquatica TR53 is an obligate aerobe, Gram-negative bacterium that forms irregular colonies and was isolated from drinking water distribution system of Seville.

Gram-negative colony-forming obligate aerobe genome sequence 16S sequence Bacteria

Name and taxonomic classification

SI-ID 297309

CECT 7131,JCM 13556,CCM 7358,CIP 109393,DSM 19438,KCTC 22105

@ref 20215

Last LPSN update 2026-05-29 08:24:56

Domain Bacteria

Phylum Pseudomonadota

Class Alphaproteobacteria

Order Rhodospirillales

Family Acetobacteraceae

Genus Paeniroseomonas

Species Paeniroseomonas aquatica

Full scientific name Paeniroseomonas aquatica (Gallego et al. 2006) Rai et al. 2022

Synonyms (1)

Roseomonas aquatica

Morphology

Cell morphology

@ref	Gram stain	Cell length	Cell width	Motility	Cell shape
22959	negative	1.2-2.0 µm	1.0 µm
116433	negative				oval-shaped

Colony morphology

@ref	Colony size	Colony color	Colony shape	Incubation period	Medium used
22959	0.5-1.0 mm	pale-pink-pigmented	irregular	4 days	R2A Agar
22959	<0.5 mm				nutrient agar medium

Culture and growth conditions

Culture medium

@ref	Name	Medium link	Composition
8017	R2A MEDIUM (DSMZ Medium 830)	Medium recipe at MediaDive	Name: R2A MEDIUM (DSMZ Medium 830) Composition: Agar 15.0 g/l Casamino acids 0.5 g/l Starch 0.5 g/l Glucose 0.5 g/l Proteose peptone 0.5 g/l Yeast extract 0.5 g/l K2HPO4 0.3 g/l Na-pyruvate 0.3 g/l MgSO4 x 7 H2O 0.05 g/l Distilled water
22959	nutrient agar medium
22959	Reasoner's 2A agar (R2A)
37542	MEDIUM 566- Reasoner's 2A agar for Flavobacterium micromati		Distilled water make up to (1000.000 ml);R2A agar (18.200 g)
116433	CIP Medium 566	Medium recipe at CIP

Culture temp

@ref	Growth	Type	Temperature (°C)
8017	positive	growth	28
22959	positive	growth	15.0-35.0
22959	positive	optimum	25.0-28.0
37542	positive	growth	30
67770	positive	growth	28

Culture pH

@ref	Ability	Type	PH	PH range
22959	positive	optimum	7.0
22959	positive	growth	5.0-9.0	alkaliphile

Physiology and metabolism

Oxygen tolerance

22959

Oxygen toleranceobligate aerobe

Spore formation

@ref	Spore formation	Confidence
22959
125439		97.945

Halophily

@ref	Salt	Growth	Tested relation	Concentration
22959	NaCl		growth	>2.0 %

Observation

67770

Observationquinones: Q-10

Metabolite utilization

@ref	Chebi-ID	Metabolite	Utilization activity	Kind of utilization tested
22959	16808 ChEBI	2-dehydro-D-gluconate	-	carbon source
22959	17426 ChEBI	5-dehydro-D-gluconate	-	carbon source
22959	17128 ChEBI	adipate	-	carbon source
22959	27613 ChEBI	amygdalin	-	carbon source
22959	18305 ChEBI	arbutin	-	carbon source
22959		casein	-	hydrolysis
22959	17057 ChEBI	cellobiose	-	carbon source
22959	53258 ChEBI	citric acid	-	carbon source
22959	17108 ChEBI	D-arabinose	-	carbon source
22959	18333 ChEBI	D-arabitol	-	carbon source
22959	15824 ChEBI	D-fructose	-	builds acid from
22959	15824 ChEBI	D-fructose	-	carbon source
22959	28847 ChEBI	D-fucose	-	carbon source
22959	12936 ChEBI	D-galactose	-	builds acid from
22959	12936 ChEBI	D-galactose	-	carbon source
22959	17634 ChEBI	D-glucose	-	builds acid from
22959	17634 ChEBI	D-glucose	-	carbon source
22959	62318 ChEBI	D-lyxose	-	carbon source
22959	16899 ChEBI	D-mannitol	-	builds acid from
22959	16899 ChEBI	D-mannitol	-	carbon source
22959	16024 ChEBI	D-mannose	-	builds acid from
22959	16024 ChEBI	D-mannose	-	carbon source
22959	16988 ChEBI	D-ribose	-	carbon source
22959	17924 ChEBI	D-sorbitol	-	carbon source
22959	16443 ChEBI	D-tagatose	-	carbon source
22959	16551 ChEBI	D-trehalose	-	builds acid from
22959	16551 ChEBI	D-trehalose	-	carbon source
22959	65327 ChEBI	D-xylose	-	builds acid from
22959	65327 ChEBI	D-xylose	-	carbon source
22959	27689 ChEBI	decanoate	-	carbon source
22959	16991 ChEBI	dna	-	hydrolysis
22959	17113 ChEBI	erythritol	-	carbon source
22959	4853 ChEBI	esculin	-	carbon source
22959	16813 ChEBI	galactitol	-	carbon source
22959	5291 ChEBI	gelatin	-	hydrolysis
22959	28066 ChEBI	gentiobiose	-	carbon source
22959	17234 ChEBI	glucose	-	fermentation
22959	17754 ChEBI	glycerol	-	builds acid from
22959	17754 ChEBI	glycerol	-	carbon source
22959	28087 ChEBI	glycogen	-	carbon source
22959	15443 ChEBI	inulin	-	carbon source
22959	30849 ChEBI	L-arabinose	-	carbon source
22959	18403 ChEBI	L-arabitol	-	carbon source
22959	18287 ChEBI	L-fucose	-	carbon source
22959	62345 ChEBI	L-rhamnose	-	carbon source
22959	17266 ChEBI	L-sorbose	-	carbon source
22959	65328 ChEBI	L-xylose	-	carbon source
22959	17716 ChEBI	lactose	-	builds acid from
22959	17716 ChEBI	lactose	-	carbon source
22959	25115 ChEBI	malate	-	carbon source
22959	17306 ChEBI	maltose	-	builds acid from
22959	17306 ChEBI	maltose	-	carbon source
22959	6731 ChEBI	melezitose	-	carbon source
22959	28053 ChEBI	melibiose	-	carbon source
22959	320061 ChEBI	methyl alpha-D-glucopyranoside	-	carbon source
22959	43943 ChEBI	methyl alpha-D-mannoside	-	carbon source
22959	74863 ChEBI	methyl beta-D-xylopyranoside	-	carbon source
22959	17268 ChEBI	myo-inositol	-	carbon source
22959	506227 ChEBI	N-acetylglucosamine	-	carbon source
22959	17632 ChEBI	nitrate	+	reduction
116433	17632 ChEBI	nitrate	+	reduction
116433	16301 ChEBI	nitrite	-	reduction
22959	18401 ChEBI	phenylacetate	-	carbon source
22959	32032 ChEBI	potassium gluconate	-	carbon source
22959	16634 ChEBI	raffinose	-	carbon source
22959	15963 ChEBI	ribitol	-	carbon source
22959	17814 ChEBI	salicin	-	carbon source
22959	53258 ChEBI	sodium citrate	-	carbon source
22959	28017 ChEBI	starch	-	carbon source
22959	28017 ChEBI	starch	-	hydrolysis
22959	17992 ChEBI	sucrose	-	carbon source
22959	27897 ChEBI	tryptophan	-	energy source
22959	32528 ChEBI	turanose	-	carbon source
22959	53426 ChEBI	tween 80	-	hydrolysis
22959	17151 ChEBI	xylitol	-	carbon source

Antibiotic resistance

@ref	ChEBI	Metabolite	Resistance conc.
22959	28669	bacitracin	10 Unit
22959	3542	cephalothin	30 µg (disc)
22959	17698	chloramphenicol	30 µg (disc)
22959	48923	erythromycin	15 µg (disc)
22959	6104	kanamycin	30 µg (disc)
22959	100147	nalidixic acid	30 µg (disc)
22959	7507	neomycin	10 µg (disc)
22959	28368	novobiocin	30 µg (disc)
22959	17334	penicillin	10 Unit
22959	28077	rifampicin	30 µg (disc)
22959	17076	streptomycin	10 µg (disc)
22959	27902	tetracycline	30 µg (disc)
22959	28001	vancomycin	30 µg (disc)

Metabolite production

@ref	Chebi-ID	Metabolite
22959	15688 ChEBI	acetoin
22959	16136 ChEBI	hydrogen sulfide
22959	35581 ChEBI	indole
116433	35581 ChEBI	indole

Metabolite tests

@ref	Chebi-ID	Metabolite	Voges-proskauer-test	Citrate test	Methylred-test	Indole test
22959	15688 ChEBI	acetoin	-
22959	16947 ChEBI	citrate		-
22959	17234 ChEBI	glucose			-
22959	35581 ChEBI	indole				-

Enzymes

@ref	Value	Activity	Ec
22959	acid phosphatase	+	3.1.3.2
68382	acid phosphatase	+	3.1.3.2	from API zym
22959	alkaline phosphatase	+	3.1.3.1
68382	alkaline phosphatase	+	3.1.3.1	from API zym
22959	alpha-chymotrypsin	-	3.4.21.1
68382	alpha-chymotrypsin	-	3.4.21.1	from API zym
22959	alpha-fucosidase	-	3.2.1.51
68382	alpha-fucosidase	-	3.2.1.51	from API zym
22959	alpha-galactosidase	-	3.2.1.22
68382	alpha-galactosidase	-	3.2.1.22	from API zym
22959	alpha-glucosidase	-	3.2.1.20
68382	alpha-glucosidase	-	3.2.1.20	from API zym
22959	alpha-mannosidase	-	3.2.1.24
68382	alpha-mannosidase	-	3.2.1.24	from API zym
22959	arginine dihydrolase	-	3.5.3.6
22959	beta-galactosidase	-	3.2.1.23
68382	beta-galactosidase	-	3.2.1.23	from API zym
22959	beta-glucosidase	-	3.2.1.21
68382	beta-glucosidase	-	3.2.1.21	from API zym
22959	beta-glucuronidase	-	3.2.1.31
68382	beta-glucuronidase	-	3.2.1.31	from API zym
22959	catalase	+	1.11.1.6
116433	catalase	+	1.11.1.6
22959	cystine arylamidase	-	3.4.11.3
68382	cystine arylamidase	-	3.4.11.3	from API zym
22959	cytochrome oxidase	-	1.9.3.1
22959	esterase (C 4)	+
68382	esterase (C 4)	+		from API zym
22959	esterase lipase (C 8)	+
68382	esterase lipase (C 8)	+		from API zym
22959	leucine arylamidase	+	3.4.11.1
68382	leucine arylamidase	+	3.4.11.1	from API zym
22959	lipase (C 14)	-
68382	lipase (C 14)	-		from API zym
22959	N-acetyl-beta-glucosaminidase	-	3.2.1.52
68382	N-acetyl-beta-glucosaminidase	-	3.2.1.52	from API zym
22959	naphthol-AS-BI-phosphohydrolase	+
68382	naphthol-AS-BI-phosphohydrolase	+		from API zym
116433	oxidase	-
22959	trypsin	-	3.4.21.4
68382	trypsin	-	3.4.21.4	from API zym
22959	tryptophan deaminase	-	4.1.99.1
22959	urease	+	3.5.1.5
116433	urease	+	3.5.1.5
22959	valine arylamidase	-
68382	valine arylamidase	-		from API zym

API zym

@ref	Control	Alkaline phosphatase	Esterase (C 4)	2-naphtyl caprylateEsterase Lipase (C 8)	Lipase (C 14)	L-leucyl-2-naphthylamideLeucine arylamidase	L-valyl-2-naphthylamideValine arylamidase	L-cystyl-2-naphthylamideCystine arylamidase	Trypsin	alpha- Chymotrypsin	Acid phosphatase	Naphthol-AS-BI-phosphateNaphthol-AS-BI-phosphohydrolase	alpha- Galactosidase	beta- Galactosidase	beta- Glucuronidase	alpha- Glucosidase	beta- Glucosidase	N-acetyl-beta- glucosaminidase	alpha- Mannosidase	alpha- Fucosidase
116433	-	+	+	+	-	+	-	-	-	-	+	+	-	-	-	-	-	-	-	-

Isolation, sampling and environmental information

Isolation source categories

Cat1	Cat2	Cat3
#Environmental	#Aquatic	#Freshwater

Isolation

@ref	Sample type	Geographic location	Country	Country ISO 3 Code	Continent	Latitude	Longitude	Enrichment culture	Enrichment culture duration	Enrichment culture temperature
8017	drinking water distribution system of Seville		Spain	ESP	Europe
22959	potable water	Seville	Spain	ESP	Europe	37.3925	-5.9925 37.3925/-5.9925	plate count agar and R2A	7 days	28.0
67770	Drinking water distribution system of Seville		Spain	ESP	Europe
116433	Environment, Drinking water	Sevilla	Spain	ESP	Europe

Taxonmaps

69479

Global distribution of 16S sequence AM231587 (>99% sequence identity) for Roseomonas aquatica subclade from Microbeatlas

Aquatic Samples	761
Soil Samples	1130
Animal Samples	1125
Plant Samples	849
Total Samples	3865

Interaction and safety

Risk assessment

@ref	Biosafety level	Biosafety level comment
8017	1	Risk group (German classification) According to TRBA 466
116433	1	Risk group (French classification) According to TRBA 466

Sequence information

Genome sequences

@ref	Description	Assembly level	INSDC accession	BV-BRC accession	IMG accession	NCBI tax ID	Score
124043	ASM4266607v1 assembly for Paeniroseomonas aquatica CECT 7131	contig	GCA_042666075			373043	31.12
124043	ASM3040933v1 assembly for Paeniroseomonas aquatica CECT 7131	scaffold	GCA_030409335	373043.4	8046506197	373043	8.95

16S sequences

@ref	Description	Accession	Length	Database	NCBI tax ID
8017	Roseomonas aquatica partial 16S rRNA gene, type strain TR53T	AM231587	1387		373043

GC content

@ref	GC-content (mol%)	Method
8017	68.6	thermal denaturation, midpoint method (Tm)

Genome-based predictions

Predictions

Predictions from Deep Learning for Genome Sequence Data. R package version 0.3.1 based on: ASM4266607v1 assembly for Paeniroseomonas aquatica CECT 7131
NCBI: GCA_042666075

@ref	Trait	Model	Prediction	Confidence in %	In training data
125439	oxygen_tolerance	BacteriaNetⓘ	aerobe	80.63	no
125439	gram_stain	BacteriaNetⓘ	negative	89.35	no
125439	motility	BacteriaNetⓘ	yes	60.30	no
125439	spore_formation	BacteriaNetⓘ	no	97.95	no

Literature

Topic	Title	Authors	Journal	DOI	Year
Phylogeny	Roseomonas aquatica sp. nov., isolated from drinking water.	Gallego V, Sanchez-Porro C, Garcia MT, Ventosa A	Int J Syst Evol Microbiol	10.1099/ijs.0.64379-0	2006

References

#8017	Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 19438
#20215	Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )
#22959	Virginia Gallego,Cristina Sánchez-Porro,Maria Teresa García,Antonio Ventosa: Roseomonas aquatica sp. nov., isolated from drinking water. IJSEM 56: 2291 - 2295 2006 ( DOI 10.1099/ijs.0.64379-0 , PubMed 17012549 )
#37542	; Curators of the CIP;
#67770	Japan Collection of Microorganism (JCM) ; Curators of the JCM;
#68382	Automatically annotated from API zym .
#69479	João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta .
#116433	Collection of Institut Pasteur ; Curators of the CIP; CIP 109393
#124043	Isabel Schober, Julia Koblitz: Data extracted from sequence databases, automatically matched based on designation and taxonomy .
#125439	Philipp Münch, René Mreches, Martin Binder, Hüseyin Anil Gündüz, Xiao-Yin To, Alice McHardy: deepG: Deep Learning for Genome Sequence Data. R package version 0.3.1 .
#126262	A. Lissin, I. Schober, J. F. Witte, H. Lüken, A. Podstawka, J. Koblitz, B. Bunk, P. Dawyndt, P. Vandamme, P. de Vos, J. Overmann, L. C. Reimer: StrainInfo—the central database for linked microbial strain identifiers. ( DOI 10.1093/database/baaf059 )

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Paeniroseomonas aquatica (DSM 19438, CECT 7131, JCM 13556)

Name and taxonomic classification

Morphology

Cell morphology

Colony morphology

Culture and growth conditions

Culture medium

Culture temp

Culture pH

Physiology and metabolism

Oxygen tolerance

Spore formation

Halophily

Observation

Metabolite utilization

Antibiotic resistance

Metabolite production

Metabolite tests

Enzymes

API zym

Isolation, sampling and environmental information

Isolation source categories

Isolation

Taxonmaps

Interaction and safety

Risk assessment

Sequence information

Genome sequences

Genome browser: GCA_042666075

16S sequences

GC content

Genome-based predictions

Predictions

Literature

Literature

References

BacDive

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