Methanosarcina lacustris ZS is an anaerobe, mesophilic prokaryote that was isolated from anoxic lake sediment.
anaerobe mesophilic 16S sequence| @ref 20215 |
Last LPSN update
2025-12-16 09:48:30 |
| Domain Methanobacteriati |
| Phylum Methanobacteriota |
| Class Methanosarcinia |
| Order Methanosarcinales |
| Family Methanosarcinaceae |
| Genus Methanosarcina |
| Species Methanosarcina lacustris |
| Full scientific name Methanosarcina lacustris Simankova et al. 2002 |
| BacDive ID | Other strains from Methanosarcina lacustris (1) | Type strain |
|---|---|---|
| 7129 | M. lacustris Z-7289, DSM 10334 |
| @ref | Name | Growth | Medium link | Composition | |
|---|---|---|---|---|---|
| 5063 | METHANOSARCINA BARKERI MEDIUM (DSMZ Medium 120a) | Medium recipe at MediaDive  | Name: METHANOSARCINA BARKERI MEDIUM (DSMZ Medium 120a; with strain-specific modifications) Composition: Methanol 3.86719 g/l NaCl 2.19727 g/l NaHCO3 1.95312 g/l Yeast extract 1.95312 g/l Casitone 1.95312 g/l NH4Cl 0.488281 g/l MgSO4 x 7 H2O 0.488281 g/l K2HPO4 0.341797 g/l Na2S x 9 H2O 0.292969 g/l L-Cysteine HCl x H2O 0.292969 g/l CaCl2 x 2 H2O 0.244141 g/l KH2PO4 0.224609 g/l HCl 0.00244141 g/l FeSO4 x 7 H2O 0.00195312 g/l FeCl2 x 4 H2O 0.00146484 g/l Sodium resazurin 0.000488281 g/l CoCl2 x 6 H2O 0.000185547 g/l Pyridoxine hydrochloride 9.76563e-05 g/l MnCl2 x 4 H2O 9.76563e-05 g/l ZnCl2 6.83594e-05 g/l Thiamine HCl 4.88281e-05 g/l Riboflavin 4.88281e-05 g/l Calcium D-(+)-pantothenate 4.88281e-05 g/l Nicotinic acid 4.88281e-05 g/l p-Aminobenzoic acid 4.88281e-05 g/l (DL)-alpha-Lipoic acid 4.88281e-05 g/l Na2MoO4 x 2 H2O 3.51562e-05 g/l NiCl2 x 6 H2O 2.34375e-05 g/l Folic acid 1.95312e-05 g/l Biotin 1.95312e-05 g/l H3BO3 5.85938e-06 g/l CuCl2 x 2 H2O 1.95313e-06 g/l Vitamin B12 9.76563e-07 g/l H2SO4 Distilled water |
| @ref | Growth | Type | Temperature (°C) | Range | |
|---|---|---|---|---|---|
| 5063 | positive | growth | 25 | mesophilic |
| @ref | GC-content (mol%) | Method | |
|---|---|---|---|
| 5063 | 43.4 | thermal denaturation, midpoint method (Tm) |
| Topic | Title | Authors | Journal | DOI | Year | |
|---|---|---|---|---|---|---|
| Metabolism | Methanogens in the Antarctic Dry Valley permafrost. | Vishnivetskaya TA, Buongiorno J, Bird J, Krivushin K, Spirina EV, Oshurkova V, Shcherbakova VA, Wilson G, Lloyd KG, Rivkina EM. | FEMS Microbiol Ecol | 10.1093/femsec/fiy109 | 2018 |  |
| Enzymology | Synergy and competition during the anaerobic degradation of N-acetylglucosamine in a methane-emitting, subarctic, pH-neutral fen. | Kujala K, Schmidt O, Horn MA. | Front Microbiol | 10.3389/fmicb.2024.1428517 | 2024 | |
| Genetics | The methanogen core and pangenome: conservation and variability across biology's growth temperature extremes. | Prondzinsky P, Toyoda S, McGlynn SE. | DNA Res | 10.1093/dnares/dsac048 | 2023 | |
| Genetics | Response of soil microbial compositional and functional heterogeneity to grazing exclusion in alpine shrub and meadows in the Qinghai-Tibet Plateau. | Wang S, Abalori TA, Wang W, Deng X, Liu W, Wang J, Cao W. | Front Microbiol | 10.3389/fmicb.2022.1038805 | 2022 | |
| Microbial activity and community structure in a lake sediment used for psychrophilic anaerobic wastewater treatment. | Xing W, Zhao Y, Zuo JE. | J Appl Microbiol | 10.1111/j.1365-2672.2010.04809.x | 2010 | | |
| Long-term enriched methanogenic communities from thermokarst lake sediments show species-specific responses to warming. | In 't Zandt MH, Frank J, Yilmaz P, Cremers G, Jetten MSM, Welte CU. | FEMS Microbes | 10.1093/femsmc/xtaa008 | 2020 | | |
| Enzymology | Isolation and characterization of new strains of methanogens from cold terrestrial habitats. | Simankova MV, Kotsyurbenko OR, Lueders T, Nozhevnikova AN, Wagner B, Conrad R, Friedrich MW. | Syst Appl Microbiol | 10.1078/072320203322346173 | 2003 | |
| Phylogeny | Isolation and characterization of new Methanosarcina mazei strains KOR-3, -4, -5, and -6 from an anaerobic digester using pig slurry. | Battumur U, Yoon Y, Bae GS, Kim CH. | Asian-Australas J Anim Sci | 10.5713/ajas.16.0830 | 2017 | |
| Metabolism | ISC, a Novel Group of Bacterial and Archaeal DNA Transposons That Encode Cas9 Homologs. | Kapitonov VV, Makarova KS, Koonin EV. | J Bacteriol | 10.1128/jb.00783-15 | 2015 | |
| Metabolism | Biological nitrogen fixation in the oxygen-minimum region of the eastern tropical North Pacific ocean. | Jayakumar A, Chang BX, Widner B, Bernhardt P, Mulholland MR, Ward BB. | ISME J | 10.1038/ismej.2017.97 | 2017 | |
| Metabolism | Divergent Responses of Forest Soil Microbial Communities under Elevated CO2 in Different Depths of Upper Soil Layers. | Yu H, He Z, Wang A, Xie J, Wu L, Van Nostrand JD, Jin D, Shao Z, Schadt CW, Zhou J, Deng Y. | Appl Environ Microbiol | 10.1128/aem.01694-17 | 2018 | |
| Genetics | Diverse Microorganisms in Sediment and Groundwater Are Implicated in Extracellular Redox Processes Based on Genomic Analysis of Bioanode Communities. | Arbour TJ, Gilbert B, Banfield JF. | Front Microbiol | 10.3389/fmicb.2020.01694 | 2020 | |
| Enzymology | Novel phages of healthy skin metaviromes from South Africa. | van Zyl LJ, Abrahams Y, Stander EA, Kirby-McCollough B, Jourdain R, Clavaud C, Breton L, Trindade M. | Sci Rep | 10.1038/s41598-018-30705-1 | 2018 | |
| Pathogenicity | Antimicrobial Peptides, Polymorphic Toxins, and Self-Nonself Recognition Systems in Archaea: an Untapped Armory for Intermicrobial Conflicts. | Makarova KS, Wolf YI, Karamycheva S, Zhang D, Aravind L, Koonin EV. | mBio | 10.1128/mbio.00715-19 | 2019 | |
| Metabolism | Molecular characterization of a dechlorinating community resulting from in situ biostimulation in a trichloroethene-contaminated deep, fractured basalt aquifer and comparison to a derivative laboratory culture. | Macbeth TW, Cummings DE, Spring S, Petzke LM, Sorenson KS. | Appl Environ Microbiol | 10.1128/aem.70.12.7329-7341.2004 | 2004 | |
| Metabolism | Growth and population dynamics of anaerobic methane-oxidizing archaea and sulfate-reducing bacteria in a continuous-flow bioreactor. | Girguis PR, Cozen AE, DeLong EF. | Appl Environ Microbiol | 10.1128/aem.71.7.3725-3733.2005 | 2005 | |
| Phylogeny | Diversity of Archaea in marine sediments from Skan Bay, Alaska, including cultivated methanogens, and description of Methanogenium boonei sp. nov. | Kendall MM, Wardlaw GD, Tang CF, Bonin AS, Liu Y, Valentine DL. | Appl Environ Microbiol | 10.1128/aem.01154-06 | 2007 | |
| Phylogeny | Methanosarcina subterranea sp. nov., a methanogenic archaeon isolated from a deep subsurface diatomaceous shale formation. | Shimizu S, Ueno A, Naganuma T, Kaneko K | Int J Syst Evol Microbiol | 10.1099/ijs.0.000072 | 2015 | |
| Phylogeny | Methanosarcina lacustris sp. nov., a new psychrotolerant methanogenic archaeon from anoxic lake sediments. | Simankova MV, Parshina SN, Tourova TP, Kolganova TV, Zehnder AJ, Nozhevnikova AN | Syst Appl Microbiol | 10.1078/0723-2020-00058 | 2001 | |
How to citeIf you want to cite this particular strain cite the following doi:
https://doi.org/10.13145/bacdive7130.20251217.10
When using BacDive for research please cite the following paper
BacDive in 2025: the core database for prokaryotic strain data
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