Neoroseomonas lacus (DSM 19439, CGMCC 1.3617, JCM 13283)

Name: Neoroseomonas lacus (DSM 19439, CGMCC 1.3617, JCM 13283)
Creator: BacDive
License: http://creativecommons.org/licenses/by/4.0/

BacDive ID 71

Type strain

Strain Designation TH-G33

Culture col. no. DSM 19439 CGMCC 1.3617 JCM 13283 TH-G33 CIP 109168

NCBI tax ID(s) 287609

Special Collections DSMZ JCM CIP Literature strains

History DSMZ <- JCM/RIKEN <- Y. Zhou, Chinese Acad. Sci. (CAS), Beijing; TH-G33 JCM <-- Y. Zhou TH-G33. CIP <- 2006, JCM <- 2005, Y. Zhou, Chinese Academy Sciences, Beijing, China: strain TH-G33

Links

Neoroseomonas lacus TH-G33 is an aerobe, Gram-negative, coccus-shaped bacterium that forms punctiform colonies and was isolated from freshwater lake sediment.

Gram-negative coccus-shaped colony-forming aerobe genome sequence 16S sequence Bacteria

Name and taxonomic classification

SI-ID 289872

LMG 31229,CGMCC 1.3617,JCM 13283,CIP 109168,DSM 19439

@ref 20215

Last LPSN update 2026-05-29 08:24:56

Domain Bacteria

Phylum Pseudomonadota

Class Alphaproteobacteria

Order Rhodospirillales

Family Acetobacteraceae

Genus Neoroseomonas

Species Neoroseomonas lacus

Full scientific name Neoroseomonas lacus (Jiang et al. 2006) Rai et al. 2022

Synonyms (1)

Roseomonas lacus

Morphology

Cell morphology

@ref	Gram stain	Cell length	Cell width	Cell shape	Motility
23250	negative	0.8-1.5 µm	0.5-0.8 µm	coccus-shaped
120541	negative			rod-shaped

Colony morphology

@ref	Colony size	Colony color	Colony shape	Incubation period	Hemolysis ability
23250	0.5-1.0 mm	colourless to pale pink	punctiform	3-4 days
120541					0

Culture and growth conditions

Culture medium

@ref	Name	Medium link	Composition
8018	R2A MEDIUM (DSMZ Medium 830)	Medium recipe at MediaDive	Name: R2A MEDIUM (DSMZ Medium 830) Composition: Agar 15.0 g/l Casamino acids 0.5 g/l Starch 0.5 g/l Glucose 0.5 g/l Proteose peptone 0.5 g/l Yeast extract 0.5 g/l K2HPO4 0.3 g/l Na-pyruvate 0.3 g/l MgSO4 x 7 H2O 0.05 g/l Distilled water
23250	Nutrient medium agar
37471	MEDIUM 72- for trypto casein soja agar		Distilled water make up to (1000.000 ml);Trypto casein soy agar (40.000 g)
120541	CIP Medium 72	Medium recipe at CIP

Culture temp

@ref	Growth	Type	Temperature (°C)
8018	positive	growth	30
23250	positive	growth	30
23250	positive	growth	15-40
23250	positive	optimum	30
37471	positive	growth	30
67770	positive	growth	30

Culture pH

@ref	Ability	Type	PH	PH range
23250	positive	optimum	7
23250	positive	growth	6.0-9.0	alkaliphile

Physiology and metabolism

Oxygen tolerance

@ref	Oxygen tolerance	Confidence
23250	aerobe
120541	obligate aerobe
125439	obligate aerobe	96.988

Spore formation

23250

Spore formationno

Halophily

@ref	Salt	Growth	Tested relation	Concentration
23250	NaCl	positive	maximum	6.5 %

Observation

67770

Observationquinones: Q-10

Metabolite utilization

@ref	Chebi-ID	Metabolite	Utilization activity	Kind of utilization tested
23250	30089 ChEBI	acetate	-	carbon source
23250		casein	-	hydrolysis
23250	17057 ChEBI	cellobiose	+	oxidation
23250	16947 ChEBI	citrate	-	carbon source
23250	12936 ChEBI	D-galactose	+	carbon source
23250	17634 ChEBI	D-glucose	-	carbon source
23250	16899 ChEBI	D-mannitol	-	carbon source
23250	65327 ChEBI	D-xylose	+	carbon source
23250	65327 ChEBI	D-xylose	+	oxidation
23250	4853 ChEBI	esculin	-	hydrolysis
23250	28757 ChEBI	fructose	-	carbon source
23250	33984 ChEBI	fucose	+	oxidation
23250	5291 ChEBI	gelatin	-	hydrolysis
23250	17234 ChEBI	glucose	-	fermentation
23250	17754 ChEBI	glycerol	-	carbon source
23250	30849 ChEBI	L-arabinose	+	carbon source
23250	18019 ChEBI	L-lysine	-	carbon source
23250	62345 ChEBI	L-rhamnose	+	oxidation
23250	17716 ChEBI	lactose	-	carbon source
23250	28053 ChEBI	melibiose	+	oxidation
23250	17632 ChEBI	nitrate	+	reduction
120541	17632 ChEBI	nitrate	+	reduction
120541	16301 ChEBI	nitrite	-	reduction
23250	17272 ChEBI	propionate	-	carbon source
23250	16634 ChEBI	raffinose	-	carbon source
23250	33942 ChEBI	ribose	+	carbon source
23250	30911 ChEBI	sorbitol	-	carbon source
23250	27922 ChEBI	sorbose	+	oxidation
23250	28017 ChEBI	starch	-	hydrolysis
23250	17992 ChEBI	sucrose	+	oxidation
23250	53426 ChEBI	tween 80	-	hydrolysis

Antibiotic resistance

@ref	ChEBI	Metabolite
23250	2637	amikacin
23250	2676	amoxicillin
23250	28971	ampicillin
23250	3478	cefaclor
23250	474053	cefazolin
23250	3493	cefoperazone
23250	204928	cefotaxime
23250	3508	ceftazidime
23250	3515	cefuroxime
23250	3542	cephalothin
23250	17698	chloramphenicol
23250	100241	ciprofloxacin
23250	50845	doxycycline
23250	157175	enoxacin
23250	48923	erythromycin
23250	31810	fleroxacin
23250	17833	gentamicin
23250	6104	kanamycin
23250	63598	levofloxacin
23250	116278	lomefloxacin
23250	50694	minocycline
23250	71415	nitrofurantoin
23250	100246	norfloxacin
23250	8232	piperacillin
23250	59062	polymyxin
23250	17076	streptomycin
23250	9421	tazobactam
23250	27902	tetracycline
23250	28864	tobramycin
23250	45924	trimethoprim

Metabolite production

@ref	Chebi-ID	Metabolite
23250	15688 ChEBI	acetoin
23250	16947 ChEBI	citrate
23250	17634 ChEBI	D-glucose
120541	35581 ChEBI	indole

Metabolite tests

@ref	Chebi-ID	Metabolite	Voges-proskauer-test	Methylred-test
23250	15688 ChEBI	acetoin	-
23250	17234 ChEBI	glucose		-

Enzymes

@ref	Value	Activity	Ec
68382	acid phosphatase	+	3.1.3.2	from API zym
120541	alcohol dehydrogenase	-	1.1.1.1
68382	alkaline phosphatase	+	3.1.3.1	from API zym
68382	alpha-chymotrypsin	-	3.4.21.1	from API zym
68382	alpha-fucosidase	-	3.2.1.51	from API zym
68382	alpha-galactosidase	-	3.2.1.22	from API zym
68382	alpha-glucosidase	-	3.2.1.20	from API zym
68382	alpha-mannosidase	-	3.2.1.24	from API zym
68382	beta-galactosidase	-	3.2.1.23	from API zym
68382	beta-glucosidase	-	3.2.1.21	from API zym
68382	beta-glucuronidase	-	3.2.1.31	from API zym
23250	catalase	+	1.11.1.6
120541	catalase	+	1.11.1.6
68382	cystine arylamidase	-	3.4.11.3	from API zym
23250	cytochrome oxidase	+	1.9.3.1
68382	esterase (C 4)	+		from API zym
68382	esterase lipase (C 8)	+		from API zym
68382	leucine arylamidase	+	3.4.11.1	from API zym
68382	lipase (C 14)	-		from API zym
120541	lysine decarboxylase	-	4.1.1.18
68382	N-acetyl-beta-glucosaminidase	-	3.2.1.52	from API zym
68382	naphthol-AS-BI-phosphohydrolase	-		from API zym
120541	ornithine decarboxylase	-	4.1.1.17
120541	oxidase	+
68382	trypsin	-	3.4.21.4	from API zym
120541	urease	+	3.5.1.5
68382	valine arylamidase	-		from API zym

API zym

@ref	Control	Alkaline phosphatase	Esterase (C 4)	2-naphtyl caprylateEsterase Lipase (C 8)	Lipase (C 14)	L-leucyl-2-naphthylamideLeucine arylamidase	L-valyl-2-naphthylamideValine arylamidase	L-cystyl-2-naphthylamideCystine arylamidase	Trypsin	alpha- Chymotrypsin	Acid phosphatase	Naphthol-AS-BI-phosphateNaphthol-AS-BI-phosphohydrolase	alpha- Galactosidase	beta- Galactosidase	beta- Glucuronidase	alpha- Glucosidase	beta- Glucosidase	N-acetyl-beta- glucosaminidase	alpha- Mannosidase	alpha- Fucosidase
120541	-	+	+	+	-	+	-	-	-	-	+	-	-	-	-	-	-	-	-	-

Isolation, sampling and environmental information

Isolation source categories

Cat1	Cat2	Cat3
#Environmental	#Aquatic	#Freshwater
#Environmental	#Aquatic	#Lake (large)
#Environmental	#Aquatic	#Sediment

Isolation

@ref	Sample type	Geographic location	Country	Country ISO 3 Code	Continent	Latitude	Longitude	Enrichment culture	Enrichment culture composition	Enrichment culture temperature	Isolation procedure
8018	freshwater lake sediment	Jiangsu Province, Taihu Lake	China	CHN	Asia
23250	freshwater sediment of Taihu Lake	Jiangsu Province, Taihu Lake	China	CHN	Asia	31.453	120.038 31.453/120.038	dilute nutrient medium (DNM)	0,3 g beef extract, 1,0 g fish peptone, 0,1 g yeast extract, 0,5 g NaCl and 15 g agar per liter	30	plating 10-fold dilutions of samples
67770	Freshwater sediment of Taihu Lake		China	CHN	Asia
120541	Environment, Fresh water, lake sediment	Taihu lake, Jiangsu	China	CHN	Asia

Taxonmaps

69479

Global distribution of 16S sequence AJ786000 (>99% sequence identity) for Roseomonas from Microbeatlas

Aquatic Samples	400
Soil Samples	81
Animal Samples	41
Plant Samples	12
Total Samples	534

Interaction and safety

Risk assessment

@ref	Biosafety level	Biosafety level comment
8018	1	Risk group (German classification) According to TRBA 466
120541	1	Risk group (French classification) According to TRBA 466

Sequence information

Genome sequences

@ref	Description	Assembly level	INSDC accession	BV-BRC accession	IMG accession	NCBI tax ID	Score
66792	Roseomonas lacus DSM 19439	complete			2574180450	1123061	79.15
66792	ASM1464453v1 assembly for Neoroseomonas lacus CGMCC 1.3617	contig	GCA_014644535	287609.3	8068094925	287609	61.8

16S sequences

@ref	Description	Accession	Length	Database	NCBI tax ID
8018	Roseomonas lacus partial 16S rRNA gene, type strain TH-G33T	AJ786000	1376		287609

GC content

@ref	GC-content (mol%)	Method
8018	71.9
23250	71.90
67770	71.9	thermal denaturation, midpoint method (Tm)

Genome-based predictions

Predictions

Predictions from Deep Learning for Genome Sequence Data. R package version 0.3.1 based on: ASM1464453v1 assembly for Neoroseomonas lacus CGMCC 1.3617
NCBI: GCA_014644535

@ref	Trait	Model	Prediction	Confidence in %	In training data
125439	oxygen_tolerance	BacteriaNetⓘ	obligate aerobe	96.99	no
125439	gram_stain	BacteriaNetⓘ	positive	60.27	no
125439	motility	BacteriaNetⓘ	no	75.38	no
125439	spore_formation	BacteriaNetⓘ	no	86.88	no

Literature

Topic	Title	Authors	Journal	DOI	Year
Phylogeny	Roseomonas rubea sp. nov., isolated from rice paddy soil.	Lee HJ, Whang KS	Int J Syst Evol Microbiol	10.1099/ijsem.0.005251	2022
Phylogeny	Roseomonas arctica sp. nov., isolated from arctic glacial foreland soil.	Qiu X, Qu Z, Jiang F, Lin Y, Zhang Y, Chang X, Da X, Deng S, Kim M, Fang C, Peng F	Int J Syst Evol Microbiol	10.1099/ijsem.0.000857	2015
Phylogeny	Roseomonas eburnea sp. nov., isolated from activated sludge.	Wang C, Deng S, Liu X, Yao L, Shi C, Jiang J, Kwon SW, He J, Li J	Int J Syst Evol Microbiol	10.1099/ijsem.0.000728	2015
Phylogeny	Roseomonas alkaliterrae sp. nov., isolated from an alkali geothermal soil sample in Tengchong, Yunnan, South-West China.	Dong L, Ming H, Yin YR, Duan YY, Zhou EM, Nie GX, Feng HG, Liu L, Li WJ	Antonie Van Leeuwenhoek	10.1007/s10482-014-0144-1	2014
Phylogeny	Roseomonas soli sp. nov., isolated from an agricultural soil cultivated with Chinese cabbage (Brassica campestris).	Kim DU, Ka JO	Int J Syst Evol Microbiol	10.1099/ijs.0.053827-0	2013
Phylogeny	Roseomonas sediminicola sp. nov., isolated from fresh water.	He D, Kim JK, Jiang XY, Park HY, Sun C, Yu HS, Yoon MH, Kim SC, Jin FX, Im WT	Antonie Van Leeuwenhoek	10.1007/s10482-013-0065-4	2013
Phylogeny	Roseomonas terrae sp. nov.	Yoon JH, Kang SJ, Oh HW, Oh TK	Int J Syst Evol Microbiol	10.1099/ijs.0.65113-0	2007
Phylogeny	Roseomonas lacus sp. nov., isolated from freshwater lake sediment.	Jiang CY, Dai X, Wang BJ, Zhou YG, Liu SJ	Int J Syst Evol Microbiol	10.1099/ijs.0.63938-0	2006
Phylogeny	Roseomonas rosulenta sp. nov., isolated from rice paddy soil.	Lee HJ, Whang KS	Arch Microbiol	10.1007/s00203-022-03014-5	2022

References

#8018	Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 19439
#20215	Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )
#23250	Cheng-Ying Jiang, Xin Dai, Bao-Jun Wang, Yu-Guang Zhou, Shuang-Jiang Liu: Roseomonas lacus sp. nov., isolated from freshwater lake sediment. IJSEM 56: 25 - 28 2006 ( DOI 10.1099/ijs.0.63938-0 , PubMed 16403861 )
#37471	; Curators of the CIP;
#66792	Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .
#67770	Japan Collection of Microorganism (JCM) ; Curators of the JCM;
#68382	Automatically annotated from API zym .
#69479	João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta .
#120541	Collection of Institut Pasteur ; Curators of the CIP; CIP 109168
#125439	Philipp Münch, René Mreches, Martin Binder, Hüseyin Anil Gündüz, Xiao-Yin To, Alice McHardy: deepG: Deep Learning for Genome Sequence Data. R package version 0.3.1 .
#126262	A. Lissin, I. Schober, J. F. Witte, H. Lüken, A. Podstawka, J. Koblitz, B. Bunk, P. Dawyndt, P. Vandamme, P. de Vos, J. Overmann, L. C. Reimer: StrainInfo—the central database for linked microbial strain identifiers. ( DOI 10.1093/database/baaf059 )

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About us

Neoroseomonas lacus (DSM 19439, CGMCC 1.3617, JCM 13283)

Name and taxonomic classification

Morphology

Cell morphology

Colony morphology

Culture and growth conditions

Culture medium

Culture temp

Culture pH

Physiology and metabolism

Oxygen tolerance

Spore formation

Halophily

Observation

Metabolite utilization

Antibiotic resistance

Metabolite production

Metabolite tests

Enzymes

API zym

Isolation, sampling and environmental information

Isolation source categories

Isolation

Taxonmaps

Interaction and safety

Risk assessment

Sequence information

Genome sequences

Genome browser: GCA_014644535

16S sequences

GC content

Genome-based predictions

Predictions

Literature

Literature

References

BacDive

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