Name: Methanolacinia paynteri G-2000
Creator: BacDive
License: http://creativecommons.org/licenses/by-nc/4.0/

Strain identifier

BacDive ID: 7039

Type strain:

Species: Methanolacinia paynteri

Strain Designation: G-2000

Culture col. no.: DSM 2545, ATCC 33997, OCM 124

Strain history: <- C.J. Rivard, G-2000

NCBI tax ID(s): 694436 (strain), 230356 (species)

SI-ID 47629

DSM 2545, ATCC 33997

Section

Methanolacinia paynteri G-2000 is an anaerobe, mesophilic, Gram-negative archaeon that was isolated from marine sediment.

Gram-negative
anaerobe
mesophilic
16S sequence
Archaea
genome sequence

Information on the name and the taxonomic classification. Name and taxonomic classification

	Last LPSN update	14-12-2023 (DD-MM-YYYY)
	Domain	"Archaea"
	Phylum	*Methanobacteriota*
	Class	"Methanomicrobia"
	Order	*Methanomicrobiales*
	Family	*Methanomicrobiaceae*
	Genus	*Methanolacinia*
	Species	**Methanolacinia paynteri**
	Full Scientific Name (LPSN)	Methanolacinia paynteri (Rivard et al. 1984) Zellner et al. 1990

Synonym

Methanomicrobium paynteri

Information on morphological and physiological properties Morphology

[Ref.: #69480]	Gram stain	negative Confidence in %99.99

Information on culture and growth conditions Culture and growth conditions

[Ref.: #1119]

Culture medium

METHANOLACINIA MEDIUM (DSMZ Medium 274)

[Ref.: #1119]

Culture medium growth

[Ref.: #1119]

Culture medium link

Medium recipe at MediaDive

[Ref.: #1119]

Culture medium composition

expand / minimize

	Temperatures	Kind of temperature		Temperature
[Ref.: #1119]			growth	37 °C

[Ref.: #1119]

Temperature range

mesophilic

Information on physiology and metabolism Physiology and metabolism

[Ref.: #1119]	Oxygen tolerance	anaerobe
[Ref.: #69480]	Oxygen tolerance	anaerobe Confidence in %100

[Ref.: #69481]	Ability of spore formation	no Confidence in %100
[Ref.: #69480]	Ability of spore formation	no Confidence in %99.617

Information on isolation source, the sampling and environmental conditions Isolation, sampling and environmental information

[Ref.: #1119]	Sample type/isolated from	marine sediment
[Ref.: #1119]	Geographic location (country and/or sea, region)	Cayman Islands
[Ref.: #1119]	Country	USA
[Ref.: #1119]	Country ISO 3 Code	USA
[Ref.: #1119]	Continent	North America
* marker position based on {}

Isolation sources categories

#Environmental	#Aquatic	#Marine
#Environmental	#Aquatic	#Sediment

What are isolation sources categories?

Information on possible application of the strain and its possible interaction with e.g. potential hosts Safety information

[Ref.: #1119]

Biosafety level

Risk group (German classification)
According to TRBA 466

Information on genomic background e.g. entries in nucleic sequence databass Sequence information

16S Sequence information:

	Sequence accession description	Seq. accession number	Sequence length (bp)	Sequence database	Associated NCBI tax ID
[Ref.: #1119]	Methanolacinia paynteri 16S ribosomal RNA gene, partial sequence	AY196678	1255	ENA	230356 tax ID
[Ref.: #20218]	Methanolacinia paynteri strain G-2000 16S ribosomal RNA gene, partial sequence	JQ346754	1261	ENA	230356 tax ID	*

Genome sequence information:

	Sequence accession description	Seq. accession number	Assembly level	Sequence database	Associated NCBI tax ID
[Ref.: #66792]	Methanolacinia paynteri DSM 2545	GCA_000784355	scaffold	GenBank	230356 tax ID	*
[Ref.: #66792]	Methanolacinia paynteri DSM 2545	230356.3	wgs	PATRIC	230356 tax ID	*

[Ref.: #1119]

GC-content

44.9 mol%

Data predicted using genome information as a basis Genome-based predictions

	Trait	Prediction	Confidence in %	In training data
	Predictions from GenomeNet Sporulation v. 1 based on: Methanolacinia paynteri DSM 2545 NCBI: GCA_000784355.1
[Ref.: #69481]	spore-forming	no	100	no

	Trait	Prediction	Confidence in %	In training data
	Predictions from Diaspora project based on: Methanolacinia paynteri DSM 2545 NCBI: GCA_000784355.1
[Ref.: #69480]	motile	no	90.535	no
[Ref.: #69480]	flagellated	no	96.589	no
[Ref.: #69480]	gram-positive	no	96.393	no
[Ref.: #69480]	anaerobic	yes	99.001	yes
[Ref.: #69480]	aerobic	no	95.567	no
[Ref.: #69480]	halophile	no	81.255	no
[Ref.: #69480]	spore-forming	no	95.513	no
[Ref.: #69480]	thermophile	no	88.756	yes
[Ref.: #69480]	glucose-util	yes	72.157	no
[Ref.: #69480]	glucose-ferment	no	70.011	no

Availability in culture collections External links

[Ref.: #1119]

Culture collection no.

DSM 2545, ATCC 33997, OCM 124

[Ref.: #76498]

SI-ID 47629

Literature:

Topic	Title	Authors	Journal	DOI	Year
Phylogeny	Methanomicrobium antiquum sp. nov., a hydrogenotrophic methanogen isolated from deep sedimentary aquifers in a natural gas field.	Mochimaru H, Tamaki H, Katayama T, Imachi H, Sakata S, Kamagata Y	Int J Syst Evol Microbiol	10.1099/ijsem.0.001444	2016	*
Phylogeny	Isolation and Characterization of Methanomicrobium paynteri sp. nov., a Mesophilic Methanogen Isolated from Marine Sediments.	Rivard CJ, Henson JM, Thomas MV, Smith PH	Appl Environ Microbiol	10.1128/aem.46.2.484-490.1983	1983	*

References

#1119

Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 2545

#20215

Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )

#20218

Verslyppe, B., De Smet, W., De Baets, B., De Vos, P., Dawyndt P.: StrainInfo introduces electronic passports for microorganisms.. Syst Appl Microbiol. 37: 42 - 50 2014 ( DOI 10.1016/j.syapm.2013.11.002 , PubMed 24321274 )

#66792

Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

#69480

Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Predictions based on genome sequence made in the Diaspora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

#69481

Xiao-Yin To, René Mreches, Martin Binder, Alice C. McHardy, Philipp C. Münch: Predictions based on the model GenomeNet Sporulation v. 1 . ( DOI 10.21203/rs.3.rs-2527258/v1 )

#76498

Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.: StrainInfo: A central database for resolving microbial strain identifiers . ( DOI 10.60712/SI-ID47629.1 )

* These data were automatically processed and therefore are not curated

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Methanolacinia paynteri DSM 2545

Methanolacinia paynteri DSM 2545

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