Name: Methanoculleus palmolei INSLUZ
Creator: BacDive
License: http://creativecommons.org/licenses/by-nc/4.0/

Strain identifier

BacDive ID: 7028

Type strain:

Species: Methanoculleus palmolei

Strain Designation: INSLUZ

Culture col. no.: DSM 4273

Strain history: <- G. Zellner, INSLUZ

NCBI tax ID(s): 72612 (species)

SI-ID 47824

DSM 4273

Section

Methanoculleus palmolei INSLUZ is an anaerobe, mesophilic archaeon that was isolated from palm oil digester.

anaerobe
mesophilic
16S sequence
Archaea

Information on the name and the taxonomic classification. Name and taxonomic classification

	Last LPSN update	14-12-2023 (DD-MM-YYYY)
	Domain	"Archaea"
	Phylum	*Methanobacteriota*
	Class	"Methanomicrobia"
	Order	*Methanomicrobiales*
	Family	*Methanomicrobiaceae*
	Genus	*Methanoculleus*
	Species	**Methanoculleus palmolei**
	Full Scientific Name (LPSN)	Methanoculleus palmolei Zellner et al. 1998

Information on culture and growth conditions Culture and growth conditions

[Ref.: #1639]

Culture medium

MODIFIED METHANOBACTERIUM MEDIUM (DSMZ Medium 1523)

[Ref.: #1639]

Culture medium growth

[Ref.: #1639]

Culture medium link

Medium recipe at MediaDive

[Ref.: #1639]

Culture medium composition

expand / minimize

	Temperatures	Kind of temperature		Temperature
[Ref.: #1639]			growth	37 °C

[Ref.: #1639]

Temperature range

mesophilic

Information on physiology and metabolism Physiology and metabolism

[Ref.: #1639]

Oxygen tolerance

anaerobe

Information on isolation source, the sampling and environmental conditions Isolation, sampling and environmental information

[Ref.: #1639]	Sample type/isolated from	palm oil digester
[Ref.: #1639]	Geographic location (country and/or sea, region)	North-Sumatra
[Ref.: #1639]	Country	Indonesia
[Ref.: #1639]	Country ISO 3 Code	IDN
[Ref.: #1639]	Continent	Asia
* marker position based on {}

Isolation sources categories

#Engineered	#Biodegradation	-
#Host	#Plants	#Tree

What are isolation sources categories?

[Ref.: #69479]

Global distribution of 16S sequence Y16382 (>99% sequence identity) for Methanoculleus palmolei subclade from Microbeatlas

Aquatic Samples	99
Soil Samples	74
Animal Samples	8
Plant Samples	9
Total Samples	190

Information on possible application of the strain and its possible interaction with e.g. potential hosts Safety information

[Ref.: #1639]

Biosafety level

Risk group (German classification)
According to TRBA 466

Information on genomic background e.g. entries in nucleic sequence databass Sequence information

16S Sequence information:

	Sequence accession description	Seq. accession number	Sequence length (bp)	Sequence database	Associated NCBI tax ID
[Ref.: #1639]	Methanoculleus palmaeoli 16S rRNA gene	Y16382	1431	ENA	72612 tax ID

Availability in culture collections External links

[Ref.: #1639]

Culture collection no.

DSM 4273

[Ref.: #76488]

SI-ID 47824

Literature:

Topic	Title	Authors	Journal	DOI	Year
Phylogeny	A novel archaeal species belonging to Methanoculleus genus identified via de-novo assembly and metagenomic binning process in biogas reactors.	Kougias PG, Campanaro S, Treu L, Zhu X, Angelidaki I	Anaerobe	10.1016/j.anaerobe.2017.02.009	2017	*
Phylogeny	Isolation and characterization of Methanoculleus receptaculi sp. nov. from Shengli oil field, China.	Cheng L, Qiu TL, Li X, Wang WD, Deng Y, Yin XB, Zhang H	FEMS Microbiol Lett	10.1111/j.1574-6968.2008.01212.x	2008	*
Phylogeny	Methanoculleus palmolei sp. nov., an irregularly coccoid methanogen from an anaerobic digester treating wastewater of a palm oil plant in north-Sumatra, Indonesia.	Zellner G, Messner P, Winter J, Stackebrandt E	Int J Syst Bacteriol	10.1099/00207713-48-4-1111	1998	*

References

#1639

Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 4273

#20215

Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )

#69479

João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta .

#76488

Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.: StrainInfo: A central database for resolving microbial strain identifiers . ( DOI 10.60712/SI-ID47824.1 )

* These data were automatically processed and therefore are not curated

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