Name: Methanococcus maripaludis LL
Creator: BacDive
License: http://creativecommons.org/licenses/by-nc/4.0/

Strain identifier

BacDive ID: 6991

Type strain:

Species: Methanococcus maripaludis

Strain Designation: LL, S2

Culture col. no.: DSM 14266, JCM 13030, NBRC 101832

Strain history: DSM 14266 <-- J. A. Leigh <-- W. B. Witman S2.

NCBI tax ID(s): 39152 (species)

SI-ID 49551

DSM 14266, JCM 13030, NBRC 101832

Other strains from Methanococcus maripaludis

M. maripaludis JJ, DSM 2067, ATCC 43000, JCM 10722, ... (type strain)
M. maripaludis Delta RC, DSM 2771, ATCC 35294
M. maripaludis JCM 10011, NBRC 102114, OCM 209
M. maripaludis JCM 10012, OCM 363
M. maripaludis JCM 10013, OCM 364

Section

Methanococcus maripaludis LL is an anaerobe, mesophilic archaeon that was isolated from salt marsh and intertidal sediments.

anaerobe
mesophilic
16S sequence
Archaea
genome sequence

Information on the name and the taxonomic classification. Name and taxonomic classification

	Last LPSN update	14-12-2023 (DD-MM-YYYY)
	Domain	"Archaea"
	Phylum	*Methanobacteriota*
	Class	*Methanococci*
	Order	*Methanococcales*
	Family	*Methanococcaceae*
	Genus	*Methanococcus*
	Species	**Methanococcus maripaludis**
	Full Scientific Name (LPSN)	Methanococcus maripaludis Jones et al. 1984

Synonym

Methanococcus deltae

Information on culture and growth conditions Culture and growth conditions

[Ref.: #5291]

Culture medium

METHANOGENIUM MEDIUM (H2/CO2) (DSMZ Medium 141)

[Ref.: #5291]

Culture medium growth

[Ref.: #5291]

Culture medium link

Medium recipe at MediaDive

[Ref.: #5291]

Culture medium composition

expand / minimize

	Temperatures	Kind of temperature		Temperature
[Ref.: #5291]			growth	37 °C
[Ref.: #67770]			growth	37 °C

[Ref.: #5291]	Temperature range	mesophilic
[Ref.: #67770]	Temperature range	mesophilic

Information on physiology and metabolism Physiology and metabolism

[Ref.: #5291]

Oxygen tolerance

anaerobe

Information on isolation source, the sampling and environmental conditions Isolation, sampling and environmental information

[Ref.: #5291]	Sample type/isolated from	salt marsh and intertidal sediments
[Ref.: #5291]	Geographic location (country and/or sea, region)	Southeastern United States
[Ref.: #5291]	Country	USA
[Ref.: #5291]	Country ISO 3 Code	USA
[Ref.: #5291]	Continent	North America

[Ref.: #67770]	Sample type/isolated from	Sediment on the bank of the Latham River
[Ref.: #67770]	Geographic location (country and/or sea, region)	near Jekyll Island, GA
[Ref.: #67770]	Country	USA
[Ref.: #67770]	Country ISO 3 Code	USA
[Ref.: #67770]	Continent	North America
* marker position based on {}

Isolation sources categories

#Environmental	#Terrestrial	#Salt marsh
#Environmental	#Terrestrial	#Tidal flat
#Condition	#Saline	-

What are isolation sources categories?

[Ref.: #69479]

Global distribution of 16S sequence AF005049 (>99% sequence identity) for Methanococcus from Microbeatlas

Aquatic Samples	93
Soil Samples	9
Animal Samples	118
Plant Samples
Total Samples	220

Information on possible application of the strain and its possible interaction with e.g. potential hosts Safety information

[Ref.: #5291]

Biosafety level

Risk group (German classification)
According to TRBA 466

Information on genomic background e.g. entries in nucleic sequence databass Sequence information

16S Sequence information:

	Sequence accession description	Seq. accession number	Sequence length (bp)	Sequence database	Associated NCBI tax ID
[Ref.: #5291]	Methanococcus maripaludis 16S ribosomal RNA gene, complete sequence	AF005049	1392	ENA	39152 tax ID

Genome sequence information:

	Sequence accession description	Seq. accession number	Assembly level	Sequence database	Associated NCBI tax ID
[Ref.: #66792]	Methanococcus maripaludis S2	GCA_000011585	complete	GenBank	267377 tax ID	*
[Ref.: #66792]	Methanococcus maripaludis S2	2563366543	complete	JGI IMG/M	267377 tax ID	*
[Ref.: #66792]	Methanococcus maripaludis S2	267377.15	complete	PATRIC	267377 tax ID	*

[Ref.: #67770]

GC-content

34.4 mol%

high performance liquid chromatography (HPLC)

Data predicted using genome information as a basis Genome-based predictions

	Trait	Prediction	Confidence in %	In training data
	Predictions from Diaspora project based on: Methanococcus maripaludis S2 S2 NCBI: GCA_000011585.1
[Ref.: #69480]	motile	no	85.536	no
[Ref.: #69480]	flagellated	no	94.671	no
[Ref.: #69480]	gram-positive	no	95.633	no
[Ref.: #69480]	anaerobic	yes	98.979	no
[Ref.: #69480]	halophile	no	74.697	no
[Ref.: #69480]	spore-forming	no	94.852	no
[Ref.: #69480]	glucose-util	yes	62.451	no
[Ref.: #69480]	aerobic	no	95.226	yes
[Ref.: #69480]	thermophile	yes	54.216	no
[Ref.: #69480]	glucose-ferment	no	57.234	no

Availability in culture collections External links

[Ref.: #5291]

Culture collection no.

DSM 14266, JCM 13030, NBRC 101832

[Ref.: #76452]

SI-ID 49551

References

#5291

Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 14266

#20215

Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )

#66792

Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

#67770 Japan Collection of Microorganism (JCM) ; Curators of the JCM;

#69479

João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta .

#69480

Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Predictions based on genome sequence made in the Diaspora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

#76452

Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.: StrainInfo: A central database for resolving microbial strain identifiers . ( DOI 10.60712/SI-ID49551.1 )

* These data were automatically processed and therefore are not curated

Change proposal

You found an error in BacDive? Please tell us about it!

Note that changes will be reviewed and judged. If your changes are legitimate, changes will occur within the next BacDive update. Only proposed changes supported by the according reference will be reviewed. The BacDive team reserves the right to reject proposed changes.

Search for species Methanococcus maripaludis in external resources:
SILVA
BRENDA
PANGAEA
StrainInfo
GBIF

Methanococcus maripaludis S2 S2

Change proposal

Change proposal